HHsearch alignment for GI: 254780928 and conserved domain: PRK03991
>PRK03991 threonyl-tRNA synthetase; Validated.
Probab=99.97 E-value=2.9e-27 Score=196.19 Aligned_cols=362 Identities=17% Similarity=0.249 Sum_probs=220.0
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCEEEECCCCH
Q ss_conf 03799876588668999999999999999985984801652022887520267554333221689869998899988883
Q gi|254780928|r 9 AELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLT 88 (496)
Q Consensus 9 ~~~P~G~~D~~p~~~~~~~~i~~~l~~~f~~~G~~~I~tP~lE~~~~~~~~~~~~~~~~k~~y~f~D~~g~~l~LRpDlT 88 (496)
T Consensus 213 p~Sd~G~~rw~PkG~~i~~lle~Yv~~~~~~~G~~eV~TP~m~d~~-~~~~sgH~~~f~e~my~~-~~d~~~~~LrpmnC 290 (613)
T PRK03991 213 PGSDVGHMRYYPKGRLMKDLLEDYVYNLVKELGAMPVETPNMYDLS-HPAIREHADKFGERQYRV-KSDKKDLMLRFAAC 290 (613)
T ss_pred CCCCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCEEEECCCEEECC-CCHHHHHHHHHCCCCEEE-ECCCHHHCCCCCCC
T ss_conf 4787775123554789999999999999986396684576164055-402556887611134256-32763323044578
Q ss_pred HHHHHHHHH-HHHHCCCCHHHHHHHHH-HCCCCCC--CC--CCCCCCCCCHHHHHCC-CHHHH--HHHHHHHHHHHHHCC
Q ss_conf 899999995-11205541123310133-3025876--44--4211111000121000-02457--889999999997518
Q gi|254780928|r 89 APLARYVAE-NFDTIVFPCRTYRIGPV-FRNEKHG--PG--RFRQFIQCDVDNVGSS-AETAD--AEMCMMMADTLEAVG 159 (496)
Q Consensus 89 ~~~aR~~~~-~~~~~~~p~k~yy~g~v-fR~e~p~--~G--r~REf~Q~g~eiiG~~-~~~~D--aEii~l~~~~l~~lg 159 (496)
T Consensus 291 pgh~~i~~~~~~SYRdLPlRl~E~g~~syR~E~SG~L~GL~RVR~FTqdDaHIFC~~~dQi~~E~~~~~~li~~v~~~fG 370 (613)
T PRK03991 291 FGQFAMLKDMTISYKNLPLKMYELSDYSFRLEQRGELVGLKRLRAFTMPDMHTLCKDMDEAMEEFEKQHKLILETGRDLG 370 (613)
T ss_pred CCCEEEECCCCCCHHHCCHHHHHHCCCEEECCCCCCEECEEEEECCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 63123510244574326467765224202125677444401332356686113168778999999999999999998639
Q ss_pred CCCCCCEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHH
Q ss_conf 88777113036605589999983256035643345553332200128967899862101650035553048999778998
Q gi|254780928|r 160 IKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDI 239 (496)
Q Consensus 160 l~~~~~~I~in~~~il~~il~~lgi~~~~~~~~~~~~~~~idkl~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 239 (496)
T Consensus 371 ~~---y~~~~r~t---~e~w~~a----e---------------------~~l~~~~~~~g~~~~~e~~~g~--------- 410 (613)
T PRK03991 371 RD---YEVAFRFT---EDFYEEN----K---------------------DWIVELAKREGKPVLVEILPER--------- 410 (613)
T ss_pred CC---EEEEECCC---HHHHHHH----H---------------------HHHHHHHHHCCCCCEEEECCCC---------
T ss_conf 76---37997078---8888899----9---------------------9999999972997147665876---------
Q ss_pred HHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCC--CCCCCCCEEEEEEECCCCCC
Q ss_conf 8874047856889989986035732588899999999998750888443001101001--22123412489985466677
Q gi|254780928|r 240 MVSFLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVR--GLEYYTGCVYEAILGFPVMN 317 (496)
Q Consensus 240 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~i~~~l~~~gv~~~~i~~Dl~lvR--gLdYYTG~vFE~~~~~~~~~ 317 (496)
T Consensus 411 -~~fyGPKI-------------Df~v~DalG---------R~wq--~~TiQlDf~lp~RF~l~Y-v~----------edg 454 (613)
T PRK03991 411 -KHYWVLKV-------------EFAIIDSLG---------RPIE--NPTVQIDVENAERFGIKY-VD----------ENG 454 (613)
T ss_pred -CCEECCCE-------------EEEEEECCC---------CCEE--EEEEEEECCCHHHCCCEE-EC----------CCC
T ss_conf -31431416-------------899984689---------7245--015898327832268789-98----------999
Q ss_pred CCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHCCCC-------CCCCCCCCEEEEEEECCCHHHH
Q ss_conf 676663101100323235521112345677421331101689999973687-------7665557714899826976899
Q gi|254780928|r 318 EKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSLESS-------TNNIKEMGPVLITTMDHDSDSL 390 (496)
Q Consensus 318 ~~~~~~~~~aI~~GGRYD~L~~~f~~~~~pavGfaigverl~~~l~~~~~~-------~~~~~~~~~v~V~~~~~~~~~~ 390 (496)
T Consensus 455 ~~~~PvmiH----------------------rAi~GS~ERfi~~LiE~~ag~~~~Gk~p~~P~WLaP~Qv~iiPVs~~~~ 512 (613)
T PRK03991 455 KEKYPVILH----------------------CSPTGSIERVIYALLEKAAKEEKEGKVPMLPTWLSPVQVRVIPVSEEHL 512 (613)
T ss_pred CCCCCEEEE----------------------CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECHHHH
T ss_conf 895885897----------------------2665639999999999850101247878888787860379997073689
Q ss_pred HHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEECHHHHHCCCEEEEECCCCCEEEEECCCHHHHHHCC
Q ss_conf 99999999999879839997189999889999998779989999887287488189978788836433112014432023
Q gi|254780928|r 391 SKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREAR 470 (496)
Q Consensus 391 ~~~~~ia~~Lr~~Gi~~e~~~~~~~sl~~~~~~A~~~g~~~viiig~~e~~~~~v~vK~l~~g~q~~~~~~~~~~~~~~~ 470 (496)
T Consensus 513 ~ya~~v~~~L~~~giRv~vD~r-~e~lgkKIR~A~~~kiPyi~VvGdkE~e~gtvsVR~R~~~~~~-------------- 577 (613)
T PRK03991 513 DYAEEVADKLEAAGIRVDVDDR-DESLGKKIRDAGKEWVPYVVVIGDKEMESGKLTVTVREESEKE-------------- 577 (613)
T ss_pred HHHHHHHHHHHHCCCEEEEECC-CCCHHHHHHHHHHCCCCEEEEEEHHHHHCCEEEEEECCCCCCC--------------
T ss_conf 9999999999977988998778-8856189998754358889999313542493799987788616--------------
Q ss_pred CCCEEECHHHHHHHHHHHH
Q ss_conf 3510307999999999999
Q gi|254780928|r 471 VAQITIPISELVSTVKKIL 489 (496)
Q Consensus 471 ~~q~~v~~~~l~~~~~~~l 489 (496)
T Consensus 578 ----~msleeli~~i~~ev 592 (613)
T PRK03991 578 ----EMTLEELIERIKEET 592 (613)
T ss_pred ----CCCHHHHHHHHHHHH
T ss_conf ----122999999999997