HHsearch alignment for GI: 254780928 and conserved domain: PRK04172

>PRK04172 pheS phenylalanyl-tRNA synthetase subunit alpha; Provisional.
Probab=98.39  E-value=2.6e-06  Score=60.13  Aligned_cols=130  Identities=25%  Similarity=0.414  Sum_probs=82.1

Q ss_pred             HHHHHHHHHHHHHHHHHCCCEEEECCCHHH----HHHHHCCCCCCCCCCCC---EEEEECC-------------------
Q ss_conf             999999999999999985984801652022----88752026755433322---1689869-------------------
Q gi|254780928|r   23 IRIRNRILDSIRNIYENYGFDPIETPLLEY----SDSLGKFLPDEDRPNKG---VFSLQDD-------------------   76 (496)
Q Consensus        23 ~~~~~~i~~~l~~~f~~~G~~~I~tP~lE~----~~~~~~~~~~~~~~~k~---~y~f~D~-------------------   76 (496)
T Consensus       244 ~Hp~~~~~~~~r~i~~~mGF~e~~g~~ve~~fwNfdaL---f~Pq~HPARd~~Dtf~l~~~~~~~lp~~~~~~Vk~~HE~  320 (501)
T PRK04172        244 KHPYREFIEEVRDILVEMGFEEVKGPIVETEFWNFDAL---FQPQDHPAREMQDTFYLKYPSKGELPEELVERVKEVHEH  320 (501)
T ss_pred             CCHHHHHHHHHHHHHHHCCCEEEECCCEECCCCCHHHH---CCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHC
T ss_conf             48899999999999997897685366101000033430---589899855544537865765455737889889998742


Q ss_pred             C----------------CCEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCC
Q ss_conf             9----------------988999888838999999951120554112331013330258764442111110001210000
Q gi|254780928|r   77 D----------------GQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSA  140 (496)
Q Consensus        77 ~----------------g~~l~LRpDlT~~~aR~~~~~~~~~~~p~k~yy~g~vfR~e~p~~Gr~REf~Q~g~eiiG~~~  140 (496)
T Consensus       321 Gg~~gS~Gw~y~w~~~~~~~~~lRthtt~~~~r~l~~~~---~~p~~~f~~~rvfR~e~~d~tH~~~F~Q~eg~v~~~~~  397 (501)
T PRK04172        321 GGDTGSRGWGYKWDEDIAKRLVLRTHTTALSARYLAERP---EPPGKYFSIGRVFRPETIDATHLPEFYQLEGIVMGEDV  397 (501)
T ss_pred             CCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHCC---CCCEEEECCCCEEECCCCCCCCCCEEEEEEEEEECCCC
T ss_conf             776788776777785566430104367466799997468---99835735650542688886544133222489984888


Q ss_pred             HHHHHHHHHHHHHHHHHCCC
Q ss_conf             24578899999999975188
Q gi|254780928|r  141 ETADAEMCMMMADTLEAVGI  160 (496)
Q Consensus       141 ~~~DaEii~l~~~~l~~lgl  160 (496)
T Consensus       398 ~~~--~L~g~l~~f~~~~g~  415 (501)
T PRK04172        398 SFR--HLLGILKEFYKRLGF  415 (501)
T ss_pred             CHH--HHHHHHHHHHHHHCC
T ss_conf             799--999999999998588