HHsearch alignment for GI: 254780928 and conserved domain: PRK12305

>PRK12305 thrS threonyl-tRNA synthetase; Reviewed.
Probab=100.00  E-value=9.3e-33  Score=231.89  Aligned_cols=368  Identities=16%  Similarity=0.165  Sum_probs=233.5

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCEEEECCCCHH
Q ss_conf             37998765886689999999999999999859848016520228875202675543332216898699988999888838
Q gi|254780928|r   10 ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTA   89 (496)
Q Consensus        10 ~~P~G~~D~~p~~~~~~~~i~~~l~~~f~~~G~~~I~tP~lE~~~~~~~~~~~~~~~~k~~y~f~D~~g~~l~LRpDlT~   89 (496)
T Consensus       195 ~~gpG~~~wlP~G~~i~~~le~~~r~~~~~~Gy~eV~TP~i~~~~L-w~~SGH~~~Y~e~Mf~~~~~~~e~~~lKPMNCP  273 (576)
T PRK12305        195 LAGQGFPIWLENGMIIKNAIRKFILELDRKYGFDEVLTPHFGEKKL-YKTSGHLDHYKDDMFKPLKIENEELIPRPMTCP  273 (576)
T ss_pred             CCCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHH-HHHCCCHHHHHHHCCCCEECCCCEEEECCCCCH
T ss_conf             4688764674767899999999999999986998984642142889-976664655664257306315641653577863


Q ss_pred             HHHHHHHHH-HHHCCCCHHHHHHHHHHCCCCCC--CC--CCCCCCCCCHHHHHCCCHHH-HH-HHHHHHHHHHHHCCCCC
Q ss_conf             999999951-12055411233101333025876--44--42111110001210000245-78-89999999997518887
Q gi|254780928|r   90 PLARYVAEN-FDTIVFPCRTYRIGPVFRNEKHG--PG--RFRQFIQCDVDNVGSSAETA-DA-EMCMMMADTLEAVGIKR  162 (496)
Q Consensus        90 ~~aR~~~~~-~~~~~~p~k~yy~g~vfR~e~p~--~G--r~REf~Q~g~eiiG~~~~~~-Da-Eii~l~~~~l~~lgl~~  162 (496)
T Consensus       274 ~H~~if~~~~rSYRdLPlR~aEfg~~~R~E~SG~L~GL~RvR~FtqDDAHIFct~dQi~~Ei~~~l~~i~~vy~~fGf~-  352 (576)
T PRK12305        274 HHIILYSNELRSYRDLPIRLSEQSRLYRYEKSGALTGLERVRAMDLTEGHIFVRKDQIESEVKHLFKMIQEALSIFKIK-  352 (576)
T ss_pred             HHHHHHHCCCCCHHHCCHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHCCCC-
T ss_conf             2677764277544432422000443544788865557554668876871212089999999999999999999853987-


Q ss_pred             CCCEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHH
Q ss_conf             77113036605589999983256035643345553332200128967899862101650035553048999778998887
Q gi|254780928|r  163 NDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS  242 (496)
Q Consensus       163 ~~~~I~in~~~il~~il~~lgi~~~~~~~~~~~~~~~idkl~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (496)
T Consensus       353 -~~~~~lS~r~~~~-~ek~~g~de--------------------~W~~Ae~~L~~a--------l~~~g~~---------  393 (576)
T PRK12305        353 -IFYISLSLRDPND-KEKFFDDDQ--------------------MWEQAEADLKKM--------LKDNKIN---------  393 (576)
T ss_pred             -CCEEEEEECCCCC-CCCCCCCCH--------------------HHHHHHHHHHHH--------HHHCCCC---------
T ss_conf             -3158999438988-753459727--------------------699999999999--------9974997---------


Q ss_pred             HHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCEEEEEEECCCCCCCCCCC
Q ss_conf             40478568899899860357325888999999999987508884430011010012212341248998546667767666
Q gi|254780928|r  243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKP  322 (496)
Q Consensus       243 ~~~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~i~~~l~~~gv~~~~i~~Dl~lvRgLdYYTG~vFE~~~~~~~~~~~~~~  322 (496)
T Consensus       394 y~~~~GegAF-----------------------------YGP---KID~~v~DalgR~wq~~TI-QlD------------  428 (576)
T PRK12305        394 YKEMIGEAAF-----------------------------YGP---KIDFQVKTVLNKEITVSTI-QLD------------  428 (576)
T ss_pred             CEECCCCCCE-----------------------------ECC---CCCEEEECCCCCEEEEEEE-EEE------------
T ss_conf             1423065010-----------------------------567---6346985067867874245-666------------


Q ss_pred             CCEEEECCCCCCCC-CCCCCCCCCCCCC-EE-EE-CCHHHHHHHHHC-CCCCCCCCCCCEEEEEEECCCHH-HHHHHHHH
Q ss_conf             31011003232355-2111234567742-13-31-101689999973-68776655577148998269768-99999999
Q gi|254780928|r  323 VVFGSVGGGGRYDG-LVSRFKGQNVPAT-GF-SI-GISRLIVALKSL-ESSTNNIKEMGPVLITTMDHDSD-SLSKYQMY  396 (496)
Q Consensus       323 ~~~~aI~~GGRYD~-L~~~f~~~~~pav-Gf-ai-gverl~~~l~~~-~~~~~~~~~~~~v~V~~~~~~~~-~~~~~~~i  396 (496)
T Consensus       429 -----f~lPeRF~l~Y~~~dg~~~rPVmIHRAilGS~ERfigiLiEh~~G~~P~WLaP~Qv~IipV~--e~~~~~ya~~v  501 (576)
T PRK12305        429 -----FLLPEKFNISYINENNEKETPVLIHRGLIGTYERFIAILLEQTKGNLPFWLSPKQVIIIPVN--ENLNTDYAKEL  501 (576)
T ss_pred             -----ECCHHHCCCEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEECC--CCHHHHHHHHH
T ss_conf             -----34585579888778887678759873354748999999999707999836273037999538--60359999999


Q ss_pred             HHHHHHCCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEECHHHHHCCCEEEEECCCCCEEEEECCCHHHHHHCCCCCEEE
Q ss_conf             99999879839997189999889999998779989999887287488189978788836433112014432023351030
Q gi|254780928|r  397 TQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI  476 (496)
Q Consensus       397 a~~Lr~~Gi~~e~~~~~~~sl~~~~~~A~~~g~~~viiig~~e~~~~~v~vK~l~~g~q~~~~~~~~~~~~~~~~~q~~v  476 (496)
T Consensus       502 ~~~L~~~giRv~vD~~-~e~lg~KIR~a~~~kiPy~lVvGdkE~~~~~VsvR~r~~~~------------------~~~~  562 (576)
T PRK12305        502 NKKLFKLGFRSEIDLR-NERLSKKIREAQISKIKFQIIIGDEEIKNNTITYRKYGSEE------------------TTTV  562 (576)
T ss_pred             HHHHHHCCCEEEEECC-CCCHHHHHHHHHHCCCCEEEEEEHHHHHCCEEEEEECCCCC------------------CCEE
T ss_conf             9999978987999789-99676999997534999899980035545968999778885------------------5546


Q ss_pred             CHHHHHHHHHHHH
Q ss_conf             7999999999999
Q gi|254780928|r  477 PISELVSTVKKIL  489 (496)
Q Consensus       477 ~~~~l~~~~~~~l  489 (496)
T Consensus       563 ~l~efi~~l~~l~  575 (576)
T PRK12305        563 SIEDFIKMLKNLK  575 (576)
T ss_pred             EHHHHHHHHHHHC
T ss_conf             8999999999730