HHsearch alignment for GI: 254780928 and conserved domain: PRK12305
>PRK12305 thrS threonyl-tRNA synthetase; Reviewed.
Probab=100.00 E-value=9.3e-33 Score=231.89 Aligned_cols=368 Identities=16% Similarity=0.165 Sum_probs=233.5
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCEEEECCCCHH
Q ss_conf 37998765886689999999999999999859848016520228875202675543332216898699988999888838
Q gi|254780928|r 10 ELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTA 89 (496)
Q Consensus 10 ~~P~G~~D~~p~~~~~~~~i~~~l~~~f~~~G~~~I~tP~lE~~~~~~~~~~~~~~~~k~~y~f~D~~g~~l~LRpDlT~ 89 (496)
T Consensus 195 ~~gpG~~~wlP~G~~i~~~le~~~r~~~~~~Gy~eV~TP~i~~~~L-w~~SGH~~~Y~e~Mf~~~~~~~e~~~lKPMNCP 273 (576)
T PRK12305 195 LAGQGFPIWLENGMIIKNAIRKFILELDRKYGFDEVLTPHFGEKKL-YKTSGHLDHYKDDMFKPLKIENEELIPRPMTCP 273 (576)
T ss_pred CCCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHH-HHHCCCHHHHHHHCCCCEECCCCEEEECCCCCH
T ss_conf 4688764674767899999999999999986998984642142889-976664655664257306315641653577863
Q ss_pred HHHHHHHHH-HHHCCCCHHHHHHHHHHCCCCCC--CC--CCCCCCCCCHHHHHCCCHHH-HH-HHHHHHHHHHHHCCCCC
Q ss_conf 999999951-12055411233101333025876--44--42111110001210000245-78-89999999997518887
Q gi|254780928|r 90 PLARYVAEN-FDTIVFPCRTYRIGPVFRNEKHG--PG--RFRQFIQCDVDNVGSSAETA-DA-EMCMMMADTLEAVGIKR 162 (496)
Q Consensus 90 ~~aR~~~~~-~~~~~~p~k~yy~g~vfR~e~p~--~G--r~REf~Q~g~eiiG~~~~~~-Da-Eii~l~~~~l~~lgl~~ 162 (496)
T Consensus 274 ~H~~if~~~~rSYRdLPlR~aEfg~~~R~E~SG~L~GL~RvR~FtqDDAHIFct~dQi~~Ei~~~l~~i~~vy~~fGf~- 352 (576)
T PRK12305 274 HHIILYSNELRSYRDLPIRLSEQSRLYRYEKSGALTGLERVRAMDLTEGHIFVRKDQIESEVKHLFKMIQEALSIFKIK- 352 (576)
T ss_pred HHHHHHHCCCCCHHHCCHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHCCCC-
T ss_conf 2677764277544432422000443544788865557554668876871212089999999999999999999853987-
Q ss_pred CCCEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHH
Q ss_conf 77113036605589999983256035643345553332200128967899862101650035553048999778998887
Q gi|254780928|r 163 NDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242 (496)
Q Consensus 163 ~~~~I~in~~~il~~il~~lgi~~~~~~~~~~~~~~~idkl~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (496)
T Consensus 353 -~~~~~lS~r~~~~-~ek~~g~de--------------------~W~~Ae~~L~~a--------l~~~g~~--------- 393 (576)
T PRK12305 353 -IFYISLSLRDPND-KEKFFDDDQ--------------------MWEQAEADLKKM--------LKDNKIN--------- 393 (576)
T ss_pred -CCEEEEEECCCCC-CCCCCCCCH--------------------HHHHHHHHHHHH--------HHHCCCC---------
T ss_conf -3158999438988-753459727--------------------699999999999--------9974997---------
Q ss_pred HHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCEEEEEEECCCCCCCCCCC
Q ss_conf 40478568899899860357325888999999999987508884430011010012212341248998546667767666
Q gi|254780928|r 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKP 322 (496)
Q Consensus 243 ~~~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~i~~~l~~~gv~~~~i~~Dl~lvRgLdYYTG~vFE~~~~~~~~~~~~~~ 322 (496)
T Consensus 394 y~~~~GegAF-----------------------------YGP---KID~~v~DalgR~wq~~TI-QlD------------ 428 (576)
T PRK12305 394 YKEMIGEAAF-----------------------------YGP---KIDFQVKTVLNKEITVSTI-QLD------------ 428 (576)
T ss_pred CEECCCCCCE-----------------------------ECC---CCCEEEECCCCCEEEEEEE-EEE------------
T ss_conf 1423065010-----------------------------567---6346985067867874245-666------------
Q ss_pred CCEEEECCCCCCCC-CCCCCCCCCCCCC-EE-EE-CCHHHHHHHHHC-CCCCCCCCCCCEEEEEEECCCHH-HHHHHHHH
Q ss_conf 31011003232355-2111234567742-13-31-101689999973-68776655577148998269768-99999999
Q gi|254780928|r 323 VVFGSVGGGGRYDG-LVSRFKGQNVPAT-GF-SI-GISRLIVALKSL-ESSTNNIKEMGPVLITTMDHDSD-SLSKYQMY 396 (496)
Q Consensus 323 ~~~~aI~~GGRYD~-L~~~f~~~~~pav-Gf-ai-gverl~~~l~~~-~~~~~~~~~~~~v~V~~~~~~~~-~~~~~~~i 396 (496)
T Consensus 429 -----f~lPeRF~l~Y~~~dg~~~rPVmIHRAilGS~ERfigiLiEh~~G~~P~WLaP~Qv~IipV~--e~~~~~ya~~v 501 (576)
T PRK12305 429 -----FLLPEKFNISYINENNEKETPVLIHRGLIGTYERFIAILLEQTKGNLPFWLSPKQVIIIPVN--ENLNTDYAKEL 501 (576)
T ss_pred -----ECCHHHCCCEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEECC--CCHHHHHHHHH
T ss_conf -----34585579888778887678759873354748999999999707999836273037999538--60359999999
Q ss_pred HHHHHHCCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEECHHHHHCCCEEEEECCCCCEEEEECCCHHHHHHCCCCCEEE
Q ss_conf 99999879839997189999889999998779989999887287488189978788836433112014432023351030
Q gi|254780928|r 397 TQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITI 476 (496)
Q Consensus 397 a~~Lr~~Gi~~e~~~~~~~sl~~~~~~A~~~g~~~viiig~~e~~~~~v~vK~l~~g~q~~~~~~~~~~~~~~~~~q~~v 476 (496)
T Consensus 502 ~~~L~~~giRv~vD~~-~e~lg~KIR~a~~~kiPy~lVvGdkE~~~~~VsvR~r~~~~------------------~~~~ 562 (576)
T PRK12305 502 NKKLFKLGFRSEIDLR-NERLSKKIREAQISKIKFQIIIGDEEIKNNTITYRKYGSEE------------------TTTV 562 (576)
T ss_pred HHHHHHCCCEEEEECC-CCCHHHHHHHHHHCCCCEEEEEEHHHHHCCEEEEEECCCCC------------------CCEE
T ss_conf 9999978987999789-99676999997534999899980035545968999778885------------------5546
Q ss_pred CHHHHHHHHHHHH
Q ss_conf 7999999999999
Q gi|254780928|r 477 PISELVSTVKKIL 489 (496)
Q Consensus 477 ~~~~l~~~~~~~l 489 (496)
T Consensus 563 ~l~efi~~l~~l~ 575 (576)
T PRK12305 563 SIEDFIKMLKNLK 575 (576)
T ss_pred EHHHHHHHHHHHC
T ss_conf 8999999999730