HHsearch alignment for GI: 254780928 and conserved domain: PRK12444

>PRK12444 threonyl-tRNA synthetase; Reviewed.
Probab=100.00  E-value=2e-32  Score=229.69  Aligned_cols=368  Identities=16%  Similarity=0.234  Sum_probs=235.1

Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCEEEECCCCHHHH
Q ss_conf             99876588668999999999999999985984801652022887520267554333221689869998899988883899
Q gi|254780928|r   12 PRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPL   91 (496)
Q Consensus        12 P~G~~D~~p~~~~~~~~i~~~l~~~f~~~G~~~I~tP~lE~~~~~~~~~~~~~~~~k~~y~f~D~~g~~l~LRpDlT~~~   91 (496)
T Consensus       263 ~pG~~fwlP~G~~i~~~le~~~r~~~~~~GY~eV~TP~i~~~~Lw-~~SGH~~~Y~e~Mf~~-~~d~~~~~lKPMNCP~H  340 (639)
T PRK12444        263 APGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQELW-ERSGHWGHYKDNMYFS-EVDNKSFALKPMNCPGH  340 (639)
T ss_pred             CCCCEEEECCHHHHHHHHHHHHHHHHHHCCCEEECCCEEEHHHHH-HHCCHHHHHHHCCCCC-CCCCCEEECCCCCCHHH
T ss_conf             897447846786999999999999999839878228666215687-6166043333027554-54540331267685889


Q ss_pred             HHHHHHH-HHHCCCCHHHHHHHHHHCCCCCC--CC--CCCCCCCCCHHHHHCCCHHHH-H-HHHHHHHHHHHHCCCCCCC
Q ss_conf             9999951-12055411233101333025876--44--421111100012100002457-8-8999999999751888777
Q gi|254780928|r   92 ARYVAEN-FDTIVFPCRTYRIGPVFRNEKHG--PG--RFRQFIQCDVDNVGSSAETAD-A-EMCMMMADTLEAVGIKRND  164 (496)
Q Consensus        92 aR~~~~~-~~~~~~p~k~yy~g~vfR~e~p~--~G--r~REf~Q~g~eiiG~~~~~~D-a-Eii~l~~~~l~~lgl~~~~  164 (496)
T Consensus       341 ~~if~~~~rSYRdLPlR~aEfg~vhR~E~SG~L~GL~RVR~FtqDDAHIFct~dQi~~Ei~~~~~~~~~vy~~fGf---~  417 (639)
T PRK12444        341 MLMFKNKLHSYRELPIRMCEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPEQIEDEIKSVMAQIDYVYKTFGF---E  417 (639)
T ss_pred             HHHHHCCCCCHHHCCHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCC---E
T ss_conf             9998605621443652224336463377876645767788998798246538899999999999999999974797---2


Q ss_pred             CEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHH
Q ss_conf             11303660558999998325603564334555333220012896789986210165003555304899977899888740
Q gi|254780928|r  165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL  244 (496)
Q Consensus       165 ~~I~in~~~il~~il~~lgi~~~~~~~~~~~~~~~idkl~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (496)
T Consensus       418 ~~~~LStrpe-----k~~G~de~--------------------W~~Ae~~L~~a--------L~~~g~~---------y~  455 (639)
T PRK12444        418 YEVELSTRPE-----DSMGDDKL--------------------WEQAEAALENV--------LQSLNYK---------YR  455 (639)
T ss_pred             EEEEECCCCC-----CCCCCHHH--------------------HHHHHHHHHHH--------HHHCCCC---------EE
T ss_conf             9998167863-----34588899--------------------99999999999--------9974997---------58


Q ss_pred             CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCC
Q ss_conf             47856889989986035732588899999999998750888443001101001221234124899854666776766631
Q gi|254780928|r  245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVV  324 (496)
Q Consensus       245 ~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~i~~~l~~~gv~~~~i~~Dl~lvRgLdYYTG~vFE~~~~~~~~~~~~~~~~  324 (496)
T Consensus       456 ~~~GegAFYG--PKiD--~~v~Dalg---------R~wq--~~TIQlDF~lPeR--------F~l~Y~-~~dg~~~rPVm  511 (639)
T PRK12444        456 LNEGDGAFYG--PKID--FHIKDALN---------RSHQ--CGTIQLDFQMPEK--------FDLNYI-DEKNEKVRPVV  511 (639)
T ss_pred             ECCCCCCCCC--CEEE--EEEEECCC---------CEEE--CCEEEEEECCHHH--------CCCEEE-CCCCCCCCCEE
T ss_conf             6768636403--2656--89980788---------7245--1234552056633--------587778-78998259889


Q ss_pred             EEEECCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHC-CCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHC
Q ss_conf             01100323235521112345677421331101689999973-68776655577148998269768999999999999987
Q gi|254780928|r  325 FGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL-ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA  403 (496)
Q Consensus       325 ~~aI~~GGRYD~L~~~f~~~~~pavGfaigverl~~~l~~~-~~~~~~~~~~~~v~V~~~~~~~~~~~~~~~ia~~Lr~~  403 (496)
T Consensus       512 IHR--------------------Ai-lG-S~ERFigiLiEh~~G~fP~WLaP~Qv~Iipi~~-~~~~~Ya~~v~~~L~~~  568 (639)
T PRK12444        512 IHR--------------------AV-LG-SLDRFLAILIEHFGGAFPAWVAPVQVKVIPVSN-AVHVQYADEVADKLAQA  568 (639)
T ss_pred             EEE--------------------CC-CC-CHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCC-CHHHHHHHHHHHHHHHC
T ss_conf             995--------------------78-77-789999999997279898565720069995377-02799999999999978


Q ss_pred             CCEEEEEECCCCCHHHHHHHHHHCCCCEEEEECHHHHHCCCEEEEECCCCCEEEEECCCHHHHHHCCCCCEEECHHHHHH
Q ss_conf             98399971899998899999987799899998872874881899787888364331120144320233510307999999
Q gi|254780928|r  404 GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVS  483 (496)
Q Consensus       404 Gi~~e~~~~~~~sl~~~~~~A~~~g~~~viiig~~e~~~~~v~vK~l~~g~q~~~~~~~~~~~~~~~~~q~~v~~~~l~~  483 (496)
T Consensus       569 giRv~vD~~-~e~l~~KIR~a~~~kiPy~lVVGdkE~e~~~VsvR~r~~~~------------------~~~~~~~~fi~  629 (639)
T PRK12444        569 GVRVERDER-DEKLGYKIREAQMQKIPYVLVIGDKEMENGAVNVRKYGEEK------------------SEVVELDMFVE  629 (639)
T ss_pred             CCEEEEECC-CCCHHHHHHHHHHCCCCEEEEEEHHHHHCCEEEEEECCCCC------------------CCEEEHHHHHH
T ss_conf             988999899-99775999987433899899984156535958999778873------------------47067999999


Q ss_pred             HHHHHHHHH
Q ss_conf             999999864
Q gi|254780928|r  484 TVKKILQEN  492 (496)
Q Consensus       484 ~~~~~l~~~  492 (496)
T Consensus       630 ~l~~ei~~r  638 (639)
T PRK12444        630 SIKEEIKNR  638 (639)
T ss_pred             HHHHHHHHC
T ss_conf             999999745