HHsearch alignment for GI: 254780928 and conserved domain: PRK12444
>PRK12444 threonyl-tRNA synthetase; Reviewed.
Probab=100.00 E-value=2e-32 Score=229.69 Aligned_cols=368 Identities=16% Similarity=0.234 Sum_probs=235.1
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCEEEECCCCHHHH
Q ss_conf 99876588668999999999999999985984801652022887520267554333221689869998899988883899
Q gi|254780928|r 12 PRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQWISLRYDLTAPL 91 (496)
Q Consensus 12 P~G~~D~~p~~~~~~~~i~~~l~~~f~~~G~~~I~tP~lE~~~~~~~~~~~~~~~~k~~y~f~D~~g~~l~LRpDlT~~~ 91 (496)
T Consensus 263 ~pG~~fwlP~G~~i~~~le~~~r~~~~~~GY~eV~TP~i~~~~Lw-~~SGH~~~Y~e~Mf~~-~~d~~~~~lKPMNCP~H 340 (639)
T PRK12444 263 APGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQELW-ERSGHWGHYKDNMYFS-EVDNKSFALKPMNCPGH 340 (639)
T ss_pred CCCCEEEECCHHHHHHHHHHHHHHHHHHCCCEEECCCEEEHHHHH-HHCCHHHHHHHCCCCC-CCCCCEEECCCCCCHHH
T ss_conf 897447846786999999999999999839878228666215687-6166043333027554-54540331267685889
Q ss_pred HHHHHHH-HHHCCCCHHHHHHHHHHCCCCCC--CC--CCCCCCCCCHHHHHCCCHHHH-H-HHHHHHHHHHHHCCCCCCC
Q ss_conf 9999951-12055411233101333025876--44--421111100012100002457-8-8999999999751888777
Q gi|254780928|r 92 ARYVAEN-FDTIVFPCRTYRIGPVFRNEKHG--PG--RFRQFIQCDVDNVGSSAETAD-A-EMCMMMADTLEAVGIKRND 164 (496)
Q Consensus 92 aR~~~~~-~~~~~~p~k~yy~g~vfR~e~p~--~G--r~REf~Q~g~eiiG~~~~~~D-a-Eii~l~~~~l~~lgl~~~~ 164 (496)
T Consensus 341 ~~if~~~~rSYRdLPlR~aEfg~vhR~E~SG~L~GL~RVR~FtqDDAHIFct~dQi~~Ei~~~~~~~~~vy~~fGf---~ 417 (639)
T PRK12444 341 MLMFKNKLHSYRELPIRMCEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPEQIEDEIKSVMAQIDYVYKTFGF---E 417 (639)
T ss_pred HHHHHCCCCCHHHCCHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCC---E
T ss_conf 9998605621443652224336463377876645767788998798246538899999999999999999974797---2
Q ss_pred CEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHH
Q ss_conf 11303660558999998325603564334555333220012896789986210165003555304899977899888740
Q gi|254780928|r 165 YHIGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFL 244 (496)
Q Consensus 165 ~~I~in~~~il~~il~~lgi~~~~~~~~~~~~~~~idkl~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (496)
T Consensus 418 ~~~~LStrpe-----k~~G~de~--------------------W~~Ae~~L~~a--------L~~~g~~---------y~ 455 (639)
T PRK12444 418 YEVELSTRPE-----DSMGDDKL--------------------WEQAEAALENV--------LQSLNYK---------YR 455 (639)
T ss_pred EEEEECCCCC-----CCCCCHHH--------------------HHHHHHHHHHH--------HHHCCCC---------EE
T ss_conf 9998167863-----34588899--------------------99999999999--------9974997---------58
Q ss_pred CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCC
Q ss_conf 47856889989986035732588899999999998750888443001101001221234124899854666776766631
Q gi|254780928|r 245 SIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVV 324 (496)
Q Consensus 245 ~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~i~~~l~~~gv~~~~i~~Dl~lvRgLdYYTG~vFE~~~~~~~~~~~~~~~~ 324 (496)
T Consensus 456 ~~~GegAFYG--PKiD--~~v~Dalg---------R~wq--~~TIQlDF~lPeR--------F~l~Y~-~~dg~~~rPVm 511 (639)
T PRK12444 456 LNEGDGAFYG--PKID--FHIKDALN---------RSHQ--CGTIQLDFQMPEK--------FDLNYI-DEKNEKVRPVV 511 (639)
T ss_pred ECCCCCCCCC--CEEE--EEEEECCC---------CEEE--CCEEEEEECCHHH--------CCCEEE-CCCCCCCCCEE
T ss_conf 6768636403--2656--89980788---------7245--1234552056633--------587778-78998259889
Q ss_pred EEEECCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHC-CCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHC
Q ss_conf 01100323235521112345677421331101689999973-68776655577148998269768999999999999987
Q gi|254780928|r 325 FGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL-ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTA 403 (496)
Q Consensus 325 ~~aI~~GGRYD~L~~~f~~~~~pavGfaigverl~~~l~~~-~~~~~~~~~~~~v~V~~~~~~~~~~~~~~~ia~~Lr~~ 403 (496)
T Consensus 512 IHR--------------------Ai-lG-S~ERFigiLiEh~~G~fP~WLaP~Qv~Iipi~~-~~~~~Ya~~v~~~L~~~ 568 (639)
T PRK12444 512 IHR--------------------AV-LG-SLDRFLAILIEHFGGAFPAWVAPVQVKVIPVSN-AVHVQYADEVADKLAQA 568 (639)
T ss_pred EEE--------------------CC-CC-CHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCC-CHHHHHHHHHHHHHHHC
T ss_conf 995--------------------78-77-789999999997279898565720069995377-02799999999999978
Q ss_pred CCEEEEEECCCCCHHHHHHHHHHCCCCEEEEECHHHHHCCCEEEEECCCCCEEEEECCCHHHHHHCCCCCEEECHHHHHH
Q ss_conf 98399971899998899999987799899998872874881899787888364331120144320233510307999999
Q gi|254780928|r 404 GIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVS 483 (496)
Q Consensus 404 Gi~~e~~~~~~~sl~~~~~~A~~~g~~~viiig~~e~~~~~v~vK~l~~g~q~~~~~~~~~~~~~~~~~q~~v~~~~l~~ 483 (496)
T Consensus 569 giRv~vD~~-~e~l~~KIR~a~~~kiPy~lVVGdkE~e~~~VsvR~r~~~~------------------~~~~~~~~fi~ 629 (639)
T PRK12444 569 GVRVERDER-DEKLGYKIREAQMQKIPYVLVIGDKEMENGAVNVRKYGEEK------------------SEVVELDMFVE 629 (639)
T ss_pred CCEEEEECC-CCCHHHHHHHHHHCCCCEEEEEEHHHHHCCEEEEEECCCCC------------------CCEEEHHHHHH
T ss_conf 988999899-99775999987433899899984156535958999778873------------------47067999999
Q ss_pred HHHHHHHHH
Q ss_conf 999999864
Q gi|254780928|r 484 TVKKILQEN 492 (496)
Q Consensus 484 ~~~~~l~~~ 492 (496)
T Consensus 630 ~l~~ei~~r 638 (639)
T PRK12444 630 SIKEEIKNR 638 (639)
T ss_pred HHHHHHHHC
T ss_conf 999999745