HHsearch alignment for GI: 254780928 and conserved domain: cd02426

>cd02426 Pol_gamma_b_Cterm C-terminal domain of mitochondrial DNA polymerase gamma B subunit, which is required for processivity. Polymerase gamma replicates and repairs mitochondrial DNA. The c-terminal domain of its B subunit is strikingly similar to the anticodon-binding domain of glycyl tRNA synthetase.
Probab=98.98  E-value=8.5e-09  Score=76.28  Aligned_cols=99  Identities=18%  Similarity=0.181  Sum_probs=79.3

Q ss_pred             CCCEEEEEEECCC-HHHHHHHHHHHHHHHHCCCEE--EEEECCCCCHHHHHHHHHHCCCCEEEEECHHHHHCCCEEEEEC
Q ss_conf             5771489982697-689999999999999879839--9971899998899999987799899998872874881899787
Q gi|254780928|r  374 EMGPVLITTMDHD-SDSLSKYQMYTQMLRTAGIRA--EMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDL  450 (496)
Q Consensus       374 ~~~~v~V~~~~~~-~~~~~~~~~ia~~Lr~~Gi~~--e~~~~~~~sl~~~~~~A~~~g~~~viiig~~e~~~~~v~vK~l  450 (496)
T Consensus        26 AP~Kvai~~~~~~~~eL~~~a~~l~~~L~~~gi~v~~~~~~d~~~sIGkrY~r~DeiGtP~citvD~~TLedgtVtlR~R  105 (128)
T cd02426          26 APYKVAIDCGKGDTAELRDLCQGLKNELREAGLSVWPGYLETQHSSLEQLLDKYDEMGVLFTLLISEQTLENGLLQLRSR  105 (128)
T ss_pred             CCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEC
T ss_conf             77179997036881888999999999998739943546354543478898877664288479997787434795898854


Q ss_pred             CCCCEEEEECCCHHHHHHCCCCCEEECHHHHHHHHHHHHH
Q ss_conf             8883643311201443202335103079999999999998
Q gi|254780928|r  451 AKGKELSREIKNNESWREARVAQITIPISELVSTVKKILQ  490 (496)
Q Consensus       451 ~~g~q~~~~~~~~~~~~~~~~~q~~v~~~~l~~~~~~~l~  490 (496)
T Consensus       106 DT~~------------------QerI~I~dl~~yl~~~i~  127 (128)
T cd02426         106 DTTL------------------KETIHISDLPDYLLRYIA  127 (128)
T ss_pred             CCCH------------------HEEEEHHHHHHHHHHHHC
T ss_conf             7602------------------135769998999999863