PSIBLAST alignment of GI: 254780928 and protein with PDB id: 1qf6

gi|5107656|pdb|1QF6|A Chain A, Structure Of E. Coli Threonyl-Trna Synthetase Complexed With Its Cognate Trna Length = 642

 Score = 54.1 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 43/348 (12%), Positives = 91/348 (26%), Gaps = 5/348 (1%)

Query: 135 NVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERL 194
            +                D +     +  +Y I   N      I  +      D      
Sbjct: 297 FMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMA 356

Query: 195 IVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHE 254
                        L G+ + +     D++  F     +  E    +     +       +
Sbjct: 357 EFGSCHRNEPSGSLHGL-MRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEK 415

Query: 255 LYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGCVYEAILGFP 314
           +   +        G +E+   +E         N I     +  G  Y     +       
Sbjct: 416 IVVKLSTRPEKRIGSDEMWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLD 475

Query: 315 VMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPAT--GFSIGISRLIVALKSLESSTNNI 372
              +    V              V     + VP       +G     + + + E +    
Sbjct: 476 RAWQCG-TVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFP 534

Query: 373 KEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYADRRNCPLA 432
             + PV +  M+            TQ L  AGIR +  L  ++  G +++    R  P  
Sbjct: 535 TWLAPVQVVIMNITDSQSEYVNELTQKLSNAGIRVKADL-RNEKIGFKIREHTLRRVPYM 593

Query: 433 IIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISE 480
           ++ G  E   G + ++        S ++       +  +   ++   E
Sbjct: 594 LVCGDKEVESGKVAVRTRRGKDLGSMDVNEVIEKLQQEIRSRSLKQLE 641