RPSBLAST alignment of GI: 254780928 and protein with PDBid: 1c0a

>1c0a_A Aspartyl tRNA synthetase; protein-RNA complex; HET: 4SU H2U QUO G7M 5MU PSU AMP AMO; 2.40A {Escherichia coli} SCOP: b.40.4.1 d.74.4.1 d.104.1.1 PDB: 1il2_A* 1eqr_A* Length = 585

 Score = 45.2 bits (106), Expect = 4e-05
 Identities = 48/237 (20%), Positives = 88/237 (37%), Gaps = 20/237 (8%)

Query: 21  KEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDRPNKGVFSLQDDDGQW 80
           + ++ R +I   +R   +++GF  IETP+L  +   G       R       +    G++
Sbjct: 136 QRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEG------ARDYLVPSRV--HKGKF 187

Query: 81  ISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSA 140
            +L           +   FD      R Y+I   FR+E     R  +F Q DV+    +A
Sbjct: 188 YALPQSPQLFKQLLMMSGFD------RYYQIVKCFRDEDLRADRQPEFTQIDVETSFMTA 241

Query: 141 ETADAEMC-MMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLHGDDKLNERLIVLRA 199
                 M  ++    LE  G+   D+ +            +K  L    +L +   +L++
Sbjct: 242 PQVREVMEALVRHLWLEVKGVDLGDFPVMTFAEAERRYGSDKPDLRNPMELTDVADLLKS 301

Query: 200 IDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLSIDLEKSMHELY 256
           ++     G               +     GA+LT +QID   +F+ I   K +  + 
Sbjct: 302 VEFAVFAG-----PANDPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIK 353