RPSBLAST alignment of GI: 254780928 and protein with PDBid: 1wu7

>1wu7_A Histidyl-tRNA synthetase; ligase, structural genomics, dimer; 2.40A {Thermoplasma acidophilum} SCOP: c.51.1.1 d.104.1.1 Length = 434
 Score =  174 bits (442), Expect = 3e-44
 Identities = 109/482 (22%), Positives = 187/482 (38%), Gaps = 61/482 (12%)

Query: 6   KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDR 65
           +L+ E  RGF D   +++ +   I  +     E +GF  I+ P LEY D         + 
Sbjct: 3   RLQIEKIRGFRDFYPEDMDVEKFIFKTAEEAAEAFGFRRIDFPSLEYLDLYRI--KSGEE 60

Query: 66  PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
             +  +S  D  G+ ++L  + T    R V    D    P R Y    V+R E+   GR+
Sbjct: 61  LLQQTYSFVDKGGREVTLIPEATPSTVRMVTSRKDLQ-RPLRWYSFPKVWRYEEPQAGRY 119

Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
           R+  Q + D  GS +  ADAE+  + +  L+ +G+ ++ Y I IN+RKI++ I+  +   
Sbjct: 120 REHYQFNADIFGSDSPEADAEVIALASSILDRLGL-QDIYEIRINSRKIMEEIIGGMTSS 178

Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
               +   +                                     L S  I      + 
Sbjct: 179 DPFSVFSIIDRY-----------------------HKISREEFVDQLRSAGIGEDGVSMI 215

Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
            DL      + E+ + T    +    +  + +L+   G  +   +   +IVRGL YYTG 
Sbjct: 216 ADLCSGTRGIDEMARITGKSSEEIARMAAVEDLLASYGVKNV--RYDFSIVRGLSYYTGI 273

Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
           V+E            +   F ++ GGGRYD L S   G++VPA GF +G + + + LK  
Sbjct: 274 VFE---------AYDRSGQFRAILGGGRYDNLASLMSGESVPAVGFGMGDAVISLLLKRE 324

Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
               N         +        + S    Y++ LR  G+   + +   +    QLKYA 
Sbjct: 325 ----NVQIPREKKSVYICRVGKINSSIMNEYSRKLRERGMNVTVEIM-ERGLSAQLKYAS 379

Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
                 A+I G  +  RG++ I+++  G                   Q  + +  +V  +
Sbjct: 380 AIGADFAVIFGERDLERGVVTIRNMYTGS------------------QENVGLDSVVEHL 421

Query: 486 KK 487
             
Sbjct: 422 IS 423