RPSBLAST alignment of GI: 254780928 and protein with PDBid: 1wu7
>1wu7_A Histidyl-tRNA synthetase; ligase, structural genomics, dimer; 2.40A {Thermoplasma acidophilum} SCOP: c.51.1.1 d.104.1.1 Length = 434
Score = 174 bits (442), Expect = 3e-44
Identities = 109/482 (22%), Positives = 187/482 (38%), Gaps = 61/482 (12%)
Query: 6 KLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPDEDR 65
+L+ E RGF D +++ + I + E +GF I+ P LEY D +
Sbjct: 3 RLQIEKIRGFRDFYPEDMDVEKFIFKTAEEAAEAFGFRRIDFPSLEYLDLYRI--KSGEE 60
Query: 66 PNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGPGRF 125
+ +S D G+ ++L + T R V D P R Y V+R E+ GR+
Sbjct: 61 LLQQTYSFVDKGGREVTLIPEATPSTVRMVTSRKDLQ-RPLRWYSFPKVWRYEEPQAGRY 119
Query: 126 RQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKIGLH 185
R+ Q + D GS + ADAE+ + + L+ +G+ ++ Y I IN+RKI++ I+ +
Sbjct: 120 REHYQFNADIFGSDSPEADAEVIALASSILDRLGL-QDIYEIRINSRKIMEEIIGGMTSS 178
Query: 186 GDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVSFLS 245
+ + L S I +
Sbjct: 179 DPFSVFSIIDRY-----------------------HKISREEFVDQLRSAGIGEDGVSMI 215
Query: 246 IDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYYTGC 305
DL + E+ + T + + + +L+ G + + +IVRGL YYTG
Sbjct: 216 ADLCSGTRGIDEMARITGKSSEEIARMAAVEDLLASYGVKNV--RYDFSIVRGLSYYTGI 273
Query: 306 VYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKGQNVPATGFSIGISRLIVALKSL 365
V+E + F ++ GGGRYD L S G++VPA GF +G + + + LK
Sbjct: 274 VFE---------AYDRSGQFRAILGGGRYDNLASLMSGESVPAVGFGMGDAVISLLLKRE 324
Query: 366 ESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQLKYAD 425
N + + S Y++ LR G+ + + + QLKYA
Sbjct: 325 ----NVQIPREKKSVYICRVGKINSSIMNEYSRKLRERGMNVTVEIM-ERGLSAQLKYAS 379
Query: 426 RRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISELVSTV 485
A+I G + RG++ I+++ G Q + + +V +
Sbjct: 380 AIGADFAVIFGERDLERGVVTIRNMYTGS------------------QENVGLDSVVEHL 421
Query: 486 KK 487
Sbjct: 422 IS 423