RPSBLAST alignment of GI: 254780928 and protein with PDBid: 2j3l
>2j3l_A Prolyl-tRNA synthetase; class II aminoacyl- tRNA synthetase, editing, translation; HET: P5A; 2.3A {Enterococcus faecalis} PDB: 2j3m_A* Length = 572
Score = 43.8 bits (102), Expect = 1e-04
Identities = 36/256 (14%), Positives = 75/256 (29%), Gaps = 26/256 (10%)
Query: 11 LPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETP------LLEYSDSLGKFLPDED 64
LP R+ ++ +R +E + P L + S + P+
Sbjct: 43 LPLAN--------RVLEKLKTIMREEFEKIDAVEMLMPALLPAELWKESGRYETYGPN-- 92
Query: 65 RPNKGVFSLQDDDGQWISLRYDLTAPLARYV-AENFDTIVFPCRTYRIGPVFRNEK---H 120
++ L+D + + L + E P Y+I +R+EK
Sbjct: 93 -----LYRLKDRNDRDYILGPTHEETFTELIRDEINSYKRLPLNLYQIQTKYRDEKRSRS 147
Query: 121 GPGRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILE 180
G R R+FI D + + + D ++ I + + G +
Sbjct: 148 GLLRGREFIMKDGYSFHADEASLDQSYRDYEKAYSRIFERCGLEFRAIIGDGGAMGGK-D 206
Query: 181 KIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIM 240
++ E I L + + D K A I +
Sbjct: 207 SKEFMAISEIGEDTICYSTESDYAANLEMATSLYTPKKSHETQLDLEKIATPEVGTIAEV 266
Query: 241 VSFLSIDLEKSMHELY 256
+F ++ ++ + +
Sbjct: 267 ANFFEVEPQRIIKSVL 282