RPSBLAST alignment of GI: 254780928 and protein with PDBid: 3ial

>3ial_A Prolyl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, prors, cysrs, Pro(Cys)RS, translation, ATP-binding; HET: PR8; 2.20A {Giardia lamblia atcc 50803} Length = 518
 Score = 87.8 bits (217), Expect = 5e-18
 Identities = 25/189 (13%), Positives = 54/189 (28%), Gaps = 19/189 (10%)

Query: 7   LRAEL------PRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
             AEL       +G          + N I+      Y   G   I  P +     L K  
Sbjct: 33  DAAELVDRRYPVKGCVVFRPYGFFMENAIMRLCEEEYAKVGISQILFPTVIPESFLKKES 92

Query: 61  PDEDRPNKGVFSLQ----DDDGQWISLRYDLTAPLARYVAEN-FDTIVFPCRTYRIGPVF 115
                     F ++        + ++LR      +    ++        P + ++   +F
Sbjct: 93  DHIKGFEAECFWVEKGGLQPLEERLALRPTSETAIYSMFSKWVRSYKDLPLKIHQTCTIF 152

Query: 116 RNEKHGP---GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNR 172
           R+E        R R+    +     ++AE A +++             +          +
Sbjct: 153 RHETKNTKPLIRVREIHWNEAHCCHATAEDAVSQLSDYWKVIDTIFSDEL-----CFKGQ 207

Query: 173 KILDGILEK 181
           K+     ++
Sbjct: 208 KLRRVCWDR 216