RPSBLAST alignment of GI: 254780928 and protein with PDBid: 3lc0
>3lc0_A Histidyl-tRNA synthetase; tRNA-ligase, aminoacyl-tRNA synthetase, ligase, structural genomics; HET: HIS; 1.80A {Trypanosoma cruzi} PDB: 3hrk_A* 3hrj_A* 3hri_A Length = 456
Score = 278 bits (711), Expect = 2e-75
Identities = 107/481 (22%), Positives = 195/481 (40%), Gaps = 48/481 (9%)
Query: 3 KKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFLPD 62
+K + E +G D P + +R R + D + +GF+ + P+LE + + +
Sbjct: 23 QKNMVETEPVQGCRDFPPEAMRCRRHLFDVFHATAKTFGFEEYDAPVLESEELYIRKAGE 82
Query: 63 EDRPNKGVFSLQDDDGQWISLRYDLTAPLARYVAENFDTIVFPCRTYRIGPVFRNEKHGP 122
E + +F+ G ++LR ++T LAR + +++ P + Y I +R E
Sbjct: 83 E--ITEQMFNFITKGGHRVALRPEMTPSLARLLLGKGRSLLLPAKWYSIPQCWRYEAITR 140
Query: 123 GRFRQFIQCDVDNVGSSAETADAEMCMMMADTLEAVGIKRNDYHIGINNRKILDGILEKI 182
GR R+ Q ++D VG + +A+ E+ + ++G+ D I +N+RK+L ++E+
Sbjct: 141 GRRREHYQWNMDIVGVKSVSAEVELVCAACWAMRSLGLSSKDVGIKVNSRKVLQTVVEQA 200
Query: 183 GLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDFTKGANLTSEQIDIMVS 242
G+ D V +DK++K + V+ L + + L+ + ID +
Sbjct: 201 GVTSDKFAP----VCVIVDKMEKIPREEVEAQLAVLGLEPTVVDAITTTLSLKSIDEIAQ 256
Query: 243 FLSIDLEKSMHELYELVKGTIAGEKGFNELVVISELVRKSGYNSNRIKISSTIVRGLEYY 302
+ + E + G + + +++VRGL YY
Sbjct: 257 RVGEEHEAVKELRQFFEQVEAYG-------------------YGDWVLFDASVVRGLAYY 297
Query: 303 TGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRFKG-QNVPATGFSIGISRLIVA 361
TG V+E + F ++ GGGRYD L++ + +P GF G ++
Sbjct: 298 TGIVFEGF---------DREGKFRALCGGGRYDNLLTTYGSPTPIPCAGFGFGDCVIVEL 348
Query: 362 LKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLRTAGIRAEMFLGSSKNFGNQL 421
L+ + + V+I D + LR AG A++ L K
Sbjct: 349 LQEKRLLPDIPHVVDDVVIPF---DESMRPHALAVLRRLRDAGRSADIILD-KKKVVQAF 404
Query: 422 KYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIKNNESWREARVAQITIPISEL 481
YADR A++ E RG +Q+K L +G +E E +P+ L
Sbjct: 405 NYADRVGAVRAVLVAPEEWERGEVQVKMLREGTG--KEEGGAE-------RGFAVPLDRL 455
Query: 482 V 482
V
Sbjct: 456 V 456