RPSBLAST alignment of GI: 254780928 and protein with PDBid: 3net
>3net_A Histidyl-tRNA synthetase; aminoacyl-tRNA synthetase, ligase, structural genomics, PSI- nostoc, protein structure initiative; 2.70A {Nostoc SP} Length = 465
Score = 284 bits (728), Expect = 3e-77
Identities = 147/508 (28%), Positives = 221/508 (43%), Gaps = 66/508 (12%)
Query: 1 MGKKTKLRAELPRGFADCPTKEIRIRNRILDSIRNIYENYGFDPIETPLLEYSDSLGKFL 60
M K K+ P GF + E R+ +LD+IR +YE+YGF PIETP +E + L
Sbjct: 4 MAKNDKINFSTPSGFPEFLPSEKRLELYLLDTIRRVYESYGFTPIETPAVERLEVLQAKG 63
Query: 61 PDEDRPNKGVFSLQ------------DDDGQWISLRYDLTAPLARYVAENFDTIVFPCRT 108
D G+ + D + +L++D T PLA Y+A + + + FP
Sbjct: 64 NQGDNIIYGLEPILPPNRQAEKDKSGDTGSEARALKFDQTVPLAAYIARHLNDLTFPFAR 123
Query: 109 YRIGPVFRNEKHGPGRFRQFIQCDVDNVGSSA--ETADAEMCMMMADTLEAVGIKRNDYH 166
Y++ VFR E+ GRFRQF QCD+D VG DA+M ++ + EAV I D+
Sbjct: 124 YQMDVVFRGERAKDGRFRQFRQCDIDVVGREKLSLLYDAQMPAIITEIFEAVNIG--DFV 181
Query: 167 IGINNRKILDGILEKIGLHGDDKLNERLIVLRAIDKLDKFGLQGVKLLLGEGRTDNSGDF 226
I INNRK+L G + + + + + ID L+K G VKL L
Sbjct: 182 IRINNRKVLTGFFQSLNISETQIKSC----ISIIDNLEKIGEAKVKLEL----------- 226
Query: 227 TKGANLTSEQIDIMVSFLSI-----DLEKSMHELYELVKGTIAGEKGFNELVVISELVRK 281
+ + EQ ++ F+ I D+ + L + + + G +EL + VR
Sbjct: 227 -EKEGINPEQTQKIIDFVKIDGSVDDVLDKLKHLSQTLPESEQFNLGVSELETVITGVRN 285
Query: 282 SGYNSNRIKISSTIVRGLEYYTGCVYEAILGFPVMNEKQKPVVFGSVGGGGRYDGLVSRF 341
G R I I RGL YYTG VYE L GS+ GGRY+ LV F
Sbjct: 286 LGVPDKRFCIDLAIARGLNYYTGTVYETTLI--------GHEALGSICSGGRYEELVGTF 337
Query: 342 KGQNVPATGFSIGISRLIVALKSLESSTNNIKEMGPVLITTMDHDSDSLSKYQMYTQMLR 401
G+ +P G SIG++RLI L V++ M + + Y +Q LR
Sbjct: 338 IGEKMPGVGISIGLTRLISRLLKAGILNTLPPTPAQVVVVNM--QDELMPTYLKVSQQLR 395
Query: 402 TAGIRAEMFLGSSKNFGNQLKYADRRNCPLAIIQGTGERSRGMLQIKDLAKGKELSREIK 461
AG+ + G Q + AD++ +I G E + +KDL G+
Sbjct: 396 QAGLNVITNFE-KRQLGKQFQAADKQGIRFCVIIGADEAAAQKSSLKDLQSGE------- 447
Query: 462 NNESWREARVAQITIPISELVSTVKKIL 489
Q+ + +++L +K+ L
Sbjct: 448 -----------QVEVALADLAEEIKRRL 464