HHsearch alignment for GI: 254780930 and conserved domain: PRK09465

>PRK09465 tolC outer membrane channel protein; Reviewed.
Probab=100.00  E-value=0  Score=417.19  Aligned_cols=385  Identities=14%  Similarity=0.186  Sum_probs=339.2

Q ss_pred             HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCC-------CCCCCCCCCCCCCCCCHHHHH
Q ss_conf             7999999999708998999999999999999875420530111011245665-------554444432111011001234
Q gi|254780930|r   60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN-------LKTNSTGQLDSDWKIDLFGQR  132 (452)
Q Consensus        60 ~L~~~i~~Al~~np~l~~a~~~i~~a~~~~~~a~a~~~P~~~~~~~~~~~~~-------~~~~~~~~~~~s~~ldl~G~~  132 (452)
T Consensus        24 tL~eal~~Al~~Np~l~~a~~~~~aa~~~~~~A~a~~lP~ls~s~~~~~~~~~~~~~~~~~~~~~~~l~l~q~lfd~~~~  103 (446)
T PRK09465         24 DLLQVYQQARLSDPELLKAAADRDAAFEKINEARSPLLPQLGLGAGYTYSNGDRDANGIDSNGLSASLQLTQTIFDMSKW  103 (446)
T ss_pred             CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCCCCCCCCEEEEEEEEEEECCHHH
T ss_conf             09999999997099999999999999988999886318858999766453257777777777612689999888665767


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             57788887776555679999999999999876666777889999999999999999878765543234567776532223
Q gi|254780930|r  133 RHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI  212 (452)
Q Consensus       133 ~~~~~a~~~~~~~~~~~~~~~~~l~~~v~~aY~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~G~~~~~d~~~a~~~~  212 (452)
T Consensus       104 ~~~~~a~~~~~~a~~~~~~~~q~l~~~v~~aY~~vl~a~~~l~la~~~~~~~~~~l~~~~~r~~~G~~~~~Dv~~a~~~l  183 (446)
T PRK09465        104 RALTLAEKAAGQADVTYQTAQQTLILRVATAYFNVLRAIDNLSFTQAEKRAIYRQLEQTKQRFNVGLVAITDVHNAQAQY  183 (446)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
T ss_conf             79999999999999999999999999999999999999999999999999999999999999977986312599999899


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             55798999999856888876877639992130001234554433100122104887899730234556555899996430
Q gi|254780930|r  213 KSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI  292 (452)
Q Consensus       213 ~~~~~~l~~~~~~~~~a~~~L~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~RPdi~~a~~~~~~a~~~i  292 (452)
T Consensus       184 ~~a~~~~~~a~~~l~~a~~~L~~l~G~~~~~~~~l~~~~~~~~~~~---~~-~~~~~~A~~~~p~l~~a~~~~~~A~~~~  259 (446)
T PRK09465        184 DTVLANEVLARNNLDNAYEALREITGNYYPELAVLNTERFSTPKPQ---SV-NALLKEAEKRNLSLLTARLSQDIAREQI  259 (446)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC---CH-HHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_conf             9999899999999999999999986889852222574335788998---89-9999999866999999999999999999


Q ss_pred             CCHHHHHHHHCCCCCCCCCCCCCC---------CCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             101122221001122221122344---------54454104431122345101245665677999999999999999999
Q gi|254780930|r  293 GIAKSDLYPSLSLNGSIALTHDNS---------FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVL  363 (452)
Q Consensus       293 ~~a~a~~~P~i~l~~~~~~~~~~~---------~~~~~~~~~~g~~l~~Pif~gg~~~a~i~~a~~~~~~a~~~~~~~~~  363 (452)
T Consensus       260 ~~aka~~~P~l~l~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~gl~ls~Pif~Gg~~~a~v~~A~~~~~~a~~~l~~~~~  339 (446)
T PRK09465        260 RLAQAGHLPTLDLTASYNISDTSYSGSKTNSQYDDSDMGQNKVGLNLSLPLYSGGMVNSQVKQAQYNFVGASEQLESAHR  339 (446)
T ss_pred             HHHHHCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99972769859999764013555666556665666776754899999987337873358999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999999999999999999999999999999999998718832899999999999999999999999999999999
Q gi|254780930|r  364 NAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLY  443 (452)
Q Consensus       364 ~a~~ev~~a~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~y~~G~~~~~dll~a~~~~~~a~~~~~~a~~~~~~a~~~L~  443 (452)
T Consensus       340 ~v~~~v~~a~~~~~~a~~~i~a~~~~v~~A~~~l~~~~~~y~~G~~t~ldvLdAq~~l~~A~~~l~~A~yd~~~a~~~L~  419 (446)
T PRK09465        340 SVVQTVRSSFNNINASISSINAYEQSVVSAQSALDATEAGFEVGTRTIVDVLDATRTLYDAKRQLSNARYNYIINQLNLK  419 (446)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999999999999999999999999999999999779964999999999999999999999999999999999


Q ss_pred             HHHCC
Q ss_conf             98499
Q gi|254780930|r  444 IAIGS  448 (452)
Q Consensus       444 ~AlGG  448 (452)
T Consensus       420 ~a~G~  424 (446)
T PRK09465        420 QALGT  424 (446)
T ss_pred             HHHCC
T ss_conf             98589