HHsearch alignment for GI: 254780930 and conserved domain: PRK09465
>PRK09465 tolC outer membrane channel protein; Reviewed.
Probab=100.00 E-value=0 Score=417.19 Aligned_cols=385 Identities=14% Similarity=0.186 Sum_probs=339.2
Q ss_pred HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCC-------CCCCCCCCCCCCCCCCHHHHH
Q ss_conf 7999999999708998999999999999999875420530111011245665-------554444432111011001234
Q gi|254780930|r 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN-------LKTNSTGQLDSDWKIDLFGQR 132 (452)
Q Consensus 60 ~L~~~i~~Al~~np~l~~a~~~i~~a~~~~~~a~a~~~P~~~~~~~~~~~~~-------~~~~~~~~~~~s~~ldl~G~~ 132 (452)
T Consensus 24 tL~eal~~Al~~Np~l~~a~~~~~aa~~~~~~A~a~~lP~ls~s~~~~~~~~~~~~~~~~~~~~~~~l~l~q~lfd~~~~ 103 (446)
T PRK09465 24 DLLQVYQQARLSDPELLKAAADRDAAFEKINEARSPLLPQLGLGAGYTYSNGDRDANGIDSNGLSASLQLTQTIFDMSKW 103 (446)
T ss_pred CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCCCCCCCCEEEEEEEEEEECCHHH
T ss_conf 09999999997099999999999999988999886318858999766453257777777777612689999888665767
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 57788887776555679999999999999876666777889999999999999999878765543234567776532223
Q gi|254780930|r 133 RHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI 212 (452)
Q Consensus 133 ~~~~~a~~~~~~~~~~~~~~~~~l~~~v~~aY~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~G~~~~~d~~~a~~~~ 212 (452)
T Consensus 104 ~~~~~a~~~~~~a~~~~~~~~q~l~~~v~~aY~~vl~a~~~l~la~~~~~~~~~~l~~~~~r~~~G~~~~~Dv~~a~~~l 183 (446)
T PRK09465 104 RALTLAEKAAGQADVTYQTAQQTLILRVATAYFNVLRAIDNLSFTQAEKRAIYRQLEQTKQRFNVGLVAITDVHNAQAQY 183 (446)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
T ss_conf 79999999999999999999999999999999999999999999999999999999999999977986312599999899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 55798999999856888876877639992130001234554433100122104887899730234556555899996430
Q gi|254780930|r 213 KSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 (452)
Q Consensus 213 ~~~~~~l~~~~~~~~~a~~~L~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~RPdi~~a~~~~~~a~~~i 292 (452)
T Consensus 184 ~~a~~~~~~a~~~l~~a~~~L~~l~G~~~~~~~~l~~~~~~~~~~~---~~-~~~~~~A~~~~p~l~~a~~~~~~A~~~~ 259 (446)
T PRK09465 184 DTVLANEVLARNNLDNAYEALREITGNYYPELAVLNTERFSTPKPQ---SV-NALLKEAEKRNLSLLTARLSQDIAREQI 259 (446)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC---CH-HHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_conf 9999899999999999999999986889852222574335788998---89-9999999866999999999999999999
Q ss_pred CCHHHHHHHHCCCCCCCCCCCCCC---------CCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 101122221001122221122344---------54454104431122345101245665677999999999999999999
Q gi|254780930|r 293 GIAKSDLYPSLSLNGSIALTHDNS---------FPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVL 363 (452)
Q Consensus 293 ~~a~a~~~P~i~l~~~~~~~~~~~---------~~~~~~~~~~g~~l~~Pif~gg~~~a~i~~a~~~~~~a~~~~~~~~~ 363 (452)
T Consensus 260 ~~aka~~~P~l~l~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~gl~ls~Pif~Gg~~~a~v~~A~~~~~~a~~~l~~~~~ 339 (446)
T PRK09465 260 RLAQAGHLPTLDLTASYNISDTSYSGSKTNSQYDDSDMGQNKVGLNLSLPLYSGGMVNSQVKQAQYNFVGASEQLESAHR 339 (446)
T ss_pred HHHHHCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99972769859999764013555666556665666776754899999987337873358999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999998718832899999999999999999999999999999999
Q gi|254780930|r 364 NAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLY 443 (452)
Q Consensus 364 ~a~~ev~~a~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~y~~G~~~~~dll~a~~~~~~a~~~~~~a~~~~~~a~~~L~ 443 (452)
T Consensus 340 ~v~~~v~~a~~~~~~a~~~i~a~~~~v~~A~~~l~~~~~~y~~G~~t~ldvLdAq~~l~~A~~~l~~A~yd~~~a~~~L~ 419 (446)
T PRK09465 340 SVVQTVRSSFNNINASISSINAYEQSVVSAQSALDATEAGFEVGTRTIVDVLDATRTLYDAKRQLSNARYNYIINQLNLK 419 (446)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999779964999999999999999999999999999999999
Q ss_pred HHHCC
Q ss_conf 98499
Q gi|254780930|r 444 IAIGS 448 (452)
Q Consensus 444 ~AlGG 448 (452)
T Consensus 420 ~a~G~ 424 (446)
T PRK09465 420 QALGT 424 (446)
T ss_pred HHHCC
T ss_conf 98589