HHsearch alignment for GI: 254780930 and conserved domain: PRK09465
>PRK09465 tolC outer membrane channel protein; Reviewed.
Probab=99.85 E-value=5.6e-19 Score=141.84 Aligned_cols=185 Identities=17% Similarity=0.176 Sum_probs=164.0
Q ss_pred HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCC--------------CCCCCCCCCCCCCC
Q ss_conf 7999999999708998999999999999999875420530111011245665--------------55444443211101
Q gi|254780930|r 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPN--------------LKTNSTGQLDSDWK 125 (452)
Q Consensus 60 ~L~~~i~~Al~~np~l~~a~~~i~~a~~~~~~a~a~~~P~~~~~~~~~~~~~--------------~~~~~~~~~~~s~~ 125 (452)
T Consensus 230 ~~~~~~~~A~~~~p~l~~a~~~~~~A~~~~~~aka~~~P~l~l~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~gl~ls~P 309 (446)
T PRK09465 230 SVNALLKEAEKRNLSLLTARLSQDIAREQIRLAQAGHLPTLDLTASYNISDTSYSGSKTNSQYDDSDMGQNKVGLNLSLP 309 (446)
T ss_pred CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEEE
T ss_conf 89999999986699999999999999999999972769859999764013555666556665666776754899999987
Q ss_pred CCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 10012345-77888877765556799999999999998766667778899999999999999998787655432345677
Q gi|254780930|r 126 IDLFGQRR-HIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLS 204 (452)
Q Consensus 126 ldl~G~~~-~~~~a~~~~~~~~~~~~~~~~~l~~~v~~aY~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~G~~~~~d 204 (452)
T Consensus 310 if~Gg~~~a~v~~A~~~~~~a~~~l~~~~~~v~~~v~~a~~~~~~a~~~i~a~~~~v~~A~~~l~~~~~~y~~G~~t~ld 389 (446)
T PRK09465 310 LYSGGMVNSQVKQAQYNFVGASEQLESAHRSVVQTVRSSFNNINASISSINAYEQSVVSAQSALDATEAGFEVGTRTIVD 389 (446)
T ss_pred EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
T ss_conf 33787335899999999999999999999999999999999999999999999999999999999999999779964999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
Q ss_conf 7653222355798999999856888876877639992130
Q gi|254780930|r 205 LVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGYPATEF 244 (452)
Q Consensus 205 ~~~a~~~~~~~~~~l~~~~~~~~~a~~~L~~l~G~~~~~~ 244 (452)
T Consensus 390 vLdAq~~l~~A~~~l~~A~yd~~~a~~~L~~a~G~L~~~~ 429 (446)
T PRK09465 390 VLDATRTLYDAKRQLSNARYNYIINQLNLKQALGTLNEQD 429 (446)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
T ss_conf 9999999999999999999999999999999858999999