HHsearch alignment for GI: 254780930 and conserved domain: PRK09837
>PRK09837 copper/silver efflux system outer membrane protein CusC; Provisional.
Probab=99.79 E-value=7.5e-17 Score=127.90 Aligned_cols=176 Identities=14% Similarity=0.152 Sum_probs=68.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCC-CCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 73023455655589999643010112222100112222112234-45445410443112234510124566567799999
Q gi|254780930|r 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDN-SFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESS 350 (452)
Q Consensus 272 l~~RPdi~~a~~~~~~a~~~i~~a~a~~~P~i~l~~~~~~~~~~-~~~~~~~~~~~g~~l~~Pif~gg~~~a~i~~a~~~ 350 (452)
T Consensus 71 l~~N~dl~~A~~rv~~A~a~~~~a~a~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~swelDl~Gr~r~~~~aa~~~ 150 (460)
T PRK09837 71 LVNNRDLRMATLKVQEARAQYRLTDADRYPQLNGEGSGSWSGNLKGDSATTREFSTGLNASFDLDFFGRLKNMSEAERQN 150 (460)
T ss_pred HHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECEEEEEEEEHHHHHHHHHHHHHHH
T ss_conf 96598799999999999999999876008831220000005778899886531000204788740322048999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999999999999999871883289999999999999999999
Q gi|254780930|r 351 AQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSI 430 (452)
Q Consensus 351 ~~~a~~~~~~~~~~a~~ev~~a~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~y~~G~~~~~dll~a~~~~~~a~~~~~~ 430 (452)
T Consensus 151 ~~a~~~~~~~~~l~l~a~Va~~Y~~l~~~~~~l~~~~~~l~~~~~~l~l~~~r~~~G~~s~ldv~qa~~~l~~~~a~l~~ 230 (460)
T PRK09837 151 YLATEEAQRAVHILLVSNVAQSYFNQQLAYAQLQIAEETLRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAK 230 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999999999999985898677899999999999987999
Q ss_pred HHHHHHHHHHHHHHHHC
Q ss_conf 99999999999999849
Q gi|254780930|r 431 AKRQLAKSYVDLYIAIG 447 (452)
Q Consensus 431 a~~~~~~a~~~L~~AlG 447 (452)
T Consensus 231 ~~~~~~~~~~~La~LlG 247 (460)
T PRK09837 231 RQGELAQANNALQLLLG 247 (460)
T ss_pred HHHHHHHHHHHHHHHHC
T ss_conf 99999999999999819