HHsearch alignment for GI: 254780930 and conserved domain: PRK11459

>PRK11459 multidrug resistance outer membrane protein MdtQ; Provisional.
Probab=100.00  E-value=0  Score=565.89  Aligned_cols=446  Identities=18%  Similarity=0.254  Sum_probs=395.4

Q ss_pred             CCCHHH---HHHH-HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCHHHHHHHCCHHHHHHHHHHHHHCHH
Q ss_conf             930699---9999-99999750268999999956475010246776--66676862343660998799999999970899
Q gi|254780930|r    1 MNILRA---IFSL-FIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSK--NLINIDTLKWWESFNDTSLNKLVKIALQQNLT   74 (452)
Q Consensus         1 M~~~~~---~~~l-~~~~l~gC~~~p~~~~p~~~~~~~~~~~~~~~--~~~~~~~~~ww~~~~d~~L~~~i~~Al~~np~   74 (452)
T Consensus         1 ~~~~~f~~~~a~l~~~llLaGCa~~~~~~~p~~~~~pa~~~~~~~~~~~~~~~p~~~WW~~F~Dp~L~~Li~~Al~~N~d   80 (478)
T PRK11459          1 MNRDSFYAATASLPLFILLAGCAPMHETRQSLTQQTPASHVDTSLPAALKNGWPDSQWWKAYHDAQLDSLIDNALQHAPD   80 (478)
T ss_pred             CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHCCHH
T ss_conf             99740588899999999983788999999999888985422257876555688706699865998799999999864960


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCC---------------C------CCCCCCCCCCCCCCCCHHHHHH
Q ss_conf             899999999999999987542053011101124566---------------5------5544444321110110012345
Q gi|254780930|r   75 ILQATERINAAKENILSVRADLFPSSYASISHRFIP---------------N------LKTNSTGQLDSDWKIDLFGQRR  133 (452)
Q Consensus        75 l~~a~~~i~~a~~~~~~a~a~~~P~~~~~~~~~~~~---------------~------~~~~~~~~~~~s~~ldl~G~~~  133 (452)
T Consensus        81 L~~A~arv~~A~a~~~~a~a~~~P~v~~~~~~~r~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~aswElDlwGr~r  160 (478)
T PRK11459         81 MQVAEQRIQLAEAQAKAVAAQDGPQLDFSADIERQKMSAEGLMGPFALNDPAAGTTGPWYTNGTFGLTAGWDLDLWGKNR  160 (478)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEHHHHHH
T ss_conf             99999999999999999865308823256324420037655567644578666777765323321413477521401467


Q ss_pred             H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             7-788887776555679999999999999876666777889999999999999999878765543234567776532223
Q gi|254780930|r  134 H-IESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI  212 (452)
Q Consensus       134 ~-~~~a~~~~~~~~~~~~~~~~~l~~~v~~aY~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~G~~~~~d~~~a~~~~  212 (452)
T Consensus       161 ~~~~Aa~a~~~A~~a~~~~~~l~l~a~VA~~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~a~~~~  240 (478)
T PRK11459        161 AEVTARIGTVKARAAEREQTRQLLAGSVARLYWEWQTQAALNTVLQQIEKEQNNIIATDRQLYQNGITSSVEGVETDINA  240 (478)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf             89999999999999999999999999999999999999999999999999999999999999981530055899999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             55798999999856888876877639992130001234554433100122104887899730234556555899996430
Q gi|254780930|r  213 KSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI  292 (452)
Q Consensus       213 ~~~~~~l~~~~~~~~~a~~~L~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~RPdi~~a~~~~~~a~~~i  292 (452)
T Consensus       241 ~~~~a~l~~~~~~~~~~~~~l~~L~g~~~~~~~~-----~~~~lp~~~~~lP~~lP~~LL~rRPDI~aAe~~l~aA~a~i  315 (478)
T PRK11459        241 SKTRQQLNDVAGKMKIIEARLSALTNTQTKSLKL-----KPVALPKVASQLPDELGYSLLARRADLQAAHWYIESSLSTI  315 (478)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-----CCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf             9999999999999999999999870899633468-----97656666767898763888705822999999999998878


Q ss_pred             CCHHHHHHHHCCCCCCCCCCC---CCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             101122221001122221122---34454454104431122345101245665677999999999999999999999999
Q gi|254780930|r  293 GIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEV  369 (452)
Q Consensus       293 ~~a~a~~~P~i~l~~~~~~~~---~~~~~~~~~~~~~g~~l~~Pif~gg~~~a~i~~a~~~~~~a~~~~~~~~~~a~~ev  369 (452)
T Consensus       316 g~A~A~~yP~isLsa~~G~~s~~~~~lf~~~~~~~~~~~~l~~PiFd~G~l~a~~~~a~A~~~~A~~~Y~~tvl~A~~eV  395 (478)
T PRK11459        316 DAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQMGVTAGLTLPIFDSGRLNANLDIAKAQSNLSIASYNKAVVDAVNDV  395 (478)
T ss_pred             HHHHHHHCCCEEEECCCCCCCCCHHHHCCCCHHHHHHCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             89999509935883136755444676436750333002111246576568999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             99999999999999999999999999999999998718832899999999999999999999999999999999984999
Q gi|254780930|r  370 ENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG  449 (452)
Q Consensus       370 ~~a~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~y~~G~~~~~dll~a~~~~~~a~~~~~~a~~~~~~a~~~L~~AlGGg  449 (452)
T Consensus       396 e~Al~~~~~~~~~~~~~~~~~~~a~~a~~la~~ry~~G~~~~l~vL~Aq~~~~~a~~~l~~~~~~~l~~~v~Ly~ALGGG  475 (478)
T PRK11459        396 ARAASQVETLAEKNQHQQQIERDALRVVGLAQARFNAGIIAGSRVSEAKIPALRERANGLLLQGQWLDASIQLTGALGGG  475 (478)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             99999999999999999999999999999999999753357999999999999999999999999999999999971887


Q ss_pred             CC
Q ss_conf             99
Q gi|254780930|r  450 YN  451 (452)
Q Consensus       450 ~~  451 (452)
T Consensus       476 Wq  477 (478)
T PRK11459        476 YH  477 (478)
T ss_pred             CC
T ss_conf             69