HHsearch alignment for GI: 254780930 and conserved domain: PRK11459
>PRK11459 multidrug resistance outer membrane protein MdtQ; Provisional.
Probab=100.00 E-value=0 Score=565.89 Aligned_cols=446 Identities=18% Similarity=0.254 Sum_probs=395.4
Q ss_pred CCCHHH---HHHH-HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCHHHHHHHCCHHHHHHHHHHHHHCHH
Q ss_conf 930699---9999-99999750268999999956475010246776--66676862343660998799999999970899
Q gi|254780930|r 1 MNILRA---IFSL-FIVLLAGCTVGPEYTKPHMPLLPTQFSIGNSK--NLINIDTLKWWESFNDTSLNKLVKIALQQNLT 74 (452)
Q Consensus 1 M~~~~~---~~~l-~~~~l~gC~~~p~~~~p~~~~~~~~~~~~~~~--~~~~~~~~~ww~~~~d~~L~~~i~~Al~~np~ 74 (452)
T Consensus 1 ~~~~~f~~~~a~l~~~llLaGCa~~~~~~~p~~~~~pa~~~~~~~~~~~~~~~p~~~WW~~F~Dp~L~~Li~~Al~~N~d 80 (478)
T PRK11459 1 MNRDSFYAATASLPLFILLAGCAPMHETRQSLTQQTPASHVDTSLPAALKNGWPDSQWWKAYHDAQLDSLIDNALQHAPD 80 (478)
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHCCHH
T ss_conf 99740588899999999983788999999999888985422257876555688706699865998799999999864960
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCC---------------C------CCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 899999999999999987542053011101124566---------------5------5544444321110110012345
Q gi|254780930|r 75 ILQATERINAAKENILSVRADLFPSSYASISHRFIP---------------N------LKTNSTGQLDSDWKIDLFGQRR 133 (452)
Q Consensus 75 l~~a~~~i~~a~~~~~~a~a~~~P~~~~~~~~~~~~---------------~------~~~~~~~~~~~s~~ldl~G~~~ 133 (452)
T Consensus 81 L~~A~arv~~A~a~~~~a~a~~~P~v~~~~~~~r~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~aswElDlwGr~r 160 (478)
T PRK11459 81 MQVAEQRIQLAEAQAKAVAAQDGPQLDFSADIERQKMSAEGLMGPFALNDPAAGTTGPWYTNGTFGLTAGWDLDLWGKNR 160 (478)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEHHHHHH
T ss_conf 99999999999999999865308823256324420037655567644578666777765323321413477521401467
Q ss_pred H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 7-788887776555679999999999999876666777889999999999999999878765543234567776532223
Q gi|254780930|r 134 H-IESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEI 212 (452)
Q Consensus 134 ~-~~~a~~~~~~~~~~~~~~~~~l~~~v~~aY~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~G~~~~~d~~~a~~~~ 212 (452)
T Consensus 161 ~~~~Aa~a~~~A~~a~~~~~~l~l~a~VA~~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~a~~~~ 240 (478)
T PRK11459 161 AEVTARIGTVKARAAEREQTRQLLAGSVARLYWEWQTQAALNTVLQQIEKEQNNIIATDRQLYQNGITSSVEGVETDINA 240 (478)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf 89999999999999999999999999999999999999999999999999999999999999981530055899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 55798999999856888876877639992130001234554433100122104887899730234556555899996430
Q gi|254780930|r 213 KSIESDIPTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292 (452)
Q Consensus 213 ~~~~~~l~~~~~~~~~a~~~L~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~RPdi~~a~~~~~~a~~~i 292 (452)
T Consensus 241 ~~~~a~l~~~~~~~~~~~~~l~~L~g~~~~~~~~-----~~~~lp~~~~~lP~~lP~~LL~rRPDI~aAe~~l~aA~a~i 315 (478)
T PRK11459 241 SKTRQQLNDVAGKMKIIEARLSALTNTQTKSLKL-----KPVALPKVASQLPDELGYSLLARRADLQAAHWYIESSLSTI 315 (478)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-----CCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999870899633468-----97656666767898763888705822999999999998878
Q ss_pred CCHHHHHHHHCCCCCCCCCCC---CCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 101122221001122221122---34454454104431122345101245665677999999999999999999999999
Q gi|254780930|r 293 GIAKSDLYPSLSLNGSIALTH---DNSFPGYNTHWSFGPKLYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEV 369 (452)
Q Consensus 293 ~~a~a~~~P~i~l~~~~~~~~---~~~~~~~~~~~~~g~~l~~Pif~gg~~~a~i~~a~~~~~~a~~~~~~~~~~a~~ev 369 (452)
T Consensus 316 g~A~A~~yP~isLsa~~G~~s~~~~~lf~~~~~~~~~~~~l~~PiFd~G~l~a~~~~a~A~~~~A~~~Y~~tvl~A~~eV 395 (478)
T PRK11459 316 DAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQMGVTAGLTLPIFDSGRLNANLDIAKAQSNLSIASYNKAVVDAVNDV 395 (478)
T ss_pred HHHHHHHCCCEEEECCCCCCCCCHHHHCCCCHHHHHHCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 89999509935883136755444676436750333002111246576568999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 99999999999999999999999999999999998718832899999999999999999999999999999999984999
Q gi|254780930|r 370 ENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSG 449 (452)
Q Consensus 370 ~~a~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~y~~G~~~~~dll~a~~~~~~a~~~~~~a~~~~~~a~~~L~~AlGGg 449 (452)
T Consensus 396 e~Al~~~~~~~~~~~~~~~~~~~a~~a~~la~~ry~~G~~~~l~vL~Aq~~~~~a~~~l~~~~~~~l~~~v~Ly~ALGGG 475 (478)
T PRK11459 396 ARAASQVETLAEKNQHQQQIERDALRVVGLAQARFNAGIIAGSRVSEAKIPALRERANGLLLQGQWLDASIQLTGALGGG 475 (478)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99999999999999999999999999999999999753357999999999999999999999999999999999971887
Q ss_pred CC
Q ss_conf 99
Q gi|254780930|r 450 YN 451 (452)
Q Consensus 450 ~~ 451 (452)
T Consensus 476 Wq 477 (478)
T PRK11459 476 YH 477 (478)
T ss_pred CC
T ss_conf 69