HHsearch alignment for GI: 254780930 and conserved domain: TIGR01844

>TIGR01844 type_I_sec_TolC type I secretion outer membrane protein, TolC family; InterPro: IPR010130 Members of group of are outer membrane proteins from the TolC family within the RND (Resistance-Nodulation-cell Division) efflux systems. These proteins, unlike the NodT family, appear not to be lipoproteins. All are believed to participate in type I protein secretion, an ABC transporter system for protein secretion without cleavage of a signal sequence, although they may, like TolC, participate also in the efflux of smaller molecules as well. This family includes the well-documented examples TolC (Escherichia coli), PrtF (Erwinia), and AprF (Pseudomonas aeruginosa).; GO: 0015031 protein transport, 0019867 outer membrane.
Probab=99.82  E-value=1e-17  Score=133.62  Aligned_cols=180  Identities=14%  Similarity=0.184  Sum_probs=161.0

Q ss_pred             HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCC------------------CCCCCCCCC
Q ss_conf             79999999997089989999999999999998754205301110112456655------------------544444321
Q gi|254780930|r   60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNL------------------KTNSTGQLD  121 (452)
Q Consensus        60 ~L~~~i~~Al~~np~l~~a~~~i~~a~~~~~~a~a~~~P~~~~~~~~~~~~~~------------------~~~~~~~~~  121 (452)
T Consensus       224 ~~~~~~~~A~~~~P~llaa~~~~~~A~~~~~~~~A~~~PTl~l~As~~~~~~~~~~~~~~g~~~~~~~D~~~~~~s~~l~  303 (437)
T TIGR01844       224 DLDQLLEIAEASNPALLAAQAAVNAARYEVEQARAGHLPTLSLTASTGKSDTASGGSGNSGAATTQQYDDYSDTDSIGLN  303 (437)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEE
T ss_conf             98999999998548999999999999999998616787413200102412554343312123443335640100035677


Q ss_pred             CCCCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             110110012345-7788887776555679999999999999876666777889999999999999999878765543234
Q gi|254780930|r  122 SDWKIDLFGQRR-HIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGAT  200 (452)
Q Consensus       122 ~s~~ldl~G~~~-~~~~a~~~~~~~~~~~~~~~~~l~~~v~~aY~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~G~~  200 (452)
T Consensus       304 ~~~PlY~GG~~~a~~rqA~~~~~~s~~~~e~~~r~v~~~~~~a~~~~~~~~~~~~a~~~~v~sa~~~~~~~~~~~~vG~R  383 (437)
T TIGR01844       304 VSIPLYQGGATSAQVRQAKHQLNQSRSTLESQKRTVRQQVRNAWSQLEAAAASVQAYEDQVASAQKALDAYRQEYQVGTR  383 (437)
T ss_pred             EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             75202237661899999999999999999878999999999999999877999999999999999999999998834753


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             567776532223557989999998568888768776399
Q gi|254780930|r  201 SKLSLVKLEAEIKSIESDIPTLEKSFRMNVHNISTLLGY  239 (452)
Q Consensus       201 ~~~d~~~a~~~~~~~~~~l~~~~~~~~~a~~~L~~l~G~  239 (452)
T Consensus       384 t~LDvLna~~eLy~A~~~l~~ary~~~~a~~~l~~A~G~  422 (437)
T TIGR01844       384 TLLDVLNAENELYQARQALVQARYDYLLAQLRLLSATGT  422 (437)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             100447558999999999986689999999999987166