HHsearch alignment of GI: 254780930 and MMDB domain: 1ek9_A_1-34_78-202_407-428

>1ek9_A (A:1-34,A:78-202,A:407-428) Outer membrane protein TOLC; integral membrane protein, alpha helical barrel, beta barrel; 2.10A {Escherichia coli}
Probab=99.65  E-value=2.1e-14  Score=111.50  Aligned_cols=178  Identities=10%  Similarity=0.087  Sum_probs=146.2

Q ss_pred             HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH-HHHHHH
Q ss_conf             9999999997089989999999999999998754205301110112456655544444321110110012345-778888
Q gi|254780930|r   61 LNKLVKIALQQNLTILQATERINAAKENILSVRADLFPSSYASISHRFIPNLKTNSTGQLDSDWKIDLFGQRR-HIESSL  139 (452)
Q Consensus        61 L~~~i~~Al~~np~l~~a~~~i~~a~~~~~~a~a~~~P~~~~~~~~~~~~~~~~~~~~~~~~s~~ldl~G~~~-~~~~a~  139 (452)
                      |.+.-+.+--.||+++.+..+-..+-..+..                                     .|+++ .++.+.
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------------~~krr~~i~~A~   45 (181)
T 1ek9_A            3 LXQVYQQARLSNPELRKSAADRDAAFEKINE-------------------------------------AXSKWRALTLQE   45 (181)
T ss_dssp             HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH-------------------------------------HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH-------------------------------------HCCHHHHHHHHH
T ss_conf             8999999997299999999999999999999-------------------------------------770589999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             77765556799999999999998766667778899999999999999998787655432345677765322235579899
Q gi|254780930|r  140 ANLDSAYAQVDIAKLNVISKLIPSYIDARHFKERISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDI  219 (452)
Q Consensus       140 ~~~~~~~~~~~~~~~~l~~~v~~aY~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~G~~~~~d~~~a~~~~~~~~~~l  219 (452)
                      ...++++++++.++.+++.+|+.+||+++.+++.+++.+++++..++.++.++.+++.|.++..|+.+++.++..++..+
T Consensus        46 ~~~~~a~~~~~~~~~~l~~~v~~aY~~l~~a~~~l~~a~~~l~~~~~~~~~~~~~~~~G~~s~~dl~~a~a~~~~~~~~l  125 (181)
T 1ek9_A           46 KAAGIQDVTYQTDQQTLILNTATAYFNVLNAIDVLSYTQAQKEAIYRQLDQTTQRFNVGLVAITDVQNARAQYDTVLANE  125 (181)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999999999999999999999999999999999999999999999998758886879999987899999999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHH
Q ss_conf             9999856888876877639992130001234554433100122104887899730234
Q gi|254780930|r  220 PTLEKSFRMNVHNISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPD  277 (452)
Q Consensus       220 ~~~~~~~~~a~~~L~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~RPd  277 (452)
                      ..++.++..+...|..++|.++.............+  ....+....++..++.+||+
T Consensus       126 ~~a~~~~~~a~~~L~~llg~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~Al~nRPE  181 (181)
T 1ek9_A          126 LTARNNLDNAVEQLRQITGNYYPELAALNVENFKLN--EQDLLALNNALSKPVSTNPE  181 (181)
T ss_dssp             HHHHHHHHHHHHHHHHHHSCCCSEEEEECTTTCCCC--HHHHHHHHHTEEEEEESSCC
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC--HHHHHHHHHHHCCCCCCCCC
T ss_conf             999999999999999872898410123574212399--88999999864699899988