HHsearch alignment of GI: 254780930 and MMDB domain: 1yc9_A_323-442

>1yc9_A (A:323-442) VCEC, multidrug resistance protein; outer membrane protein; HET: BOG; 1.80A {Vibrio cholerae}
Probab=99.73  E-value=9e-16  Score=120.43  Aligned_cols=117  Identities=21%  Similarity=0.334  Sum_probs=114.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
Q ss_conf             12456656779999999999999999999999999999999999999999999999999999999999871883289999
Q gi|254780930|r  336 DKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSLSMINYRQGRYSLLDIL  415 (452)
Q Consensus       336 ~gg~~~a~i~~a~~~~~~a~~~~~~~~~~a~~ev~~a~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~y~~G~~~~~dll  415 (452)
                      +||+++++++.++...+.+..+++++..++..+|.++|.++..+.+++...++.++.+++.++..+.+|+.|.++.+|++
T Consensus         1 sGG~~~~~v~~a~~~~~~a~~~~~~~~~~i~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~G~~~~~d~l   80 (120)
T 1yc9_A            1 TGGRLEGQLTSAEARYQEAVAQYNGTLVQALHEIADVVTSSQALQARINKTEQAVQQAEQALHIATNRYQGGLATYLDVL   80 (120)
T ss_dssp             CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSCHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
T ss_conf             14751015999999999999999999999999999999999999999999999999999999999999987996199999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf             9999999999999999999999999999984999998
Q gi|254780930|r  416 DIERATAKVEVDLSIAKRQLAKSYVDLYIAIGSGYNP  452 (452)
Q Consensus       416 ~a~~~~~~a~~~~~~a~~~~~~a~~~L~~AlGGg~~~  452 (452)
                      +++..+.+++.+++++++++..+.+.|.+++||||++
T Consensus        81 ~a~~~l~~a~~~~~~a~~~~~~a~~~L~~~~Gg~~~~  117 (120)
T 1yc9_A           81 VAEESLLNNQRALVNLQSRAFSLDLALIHALGGGFET  117 (120)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCC-
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf             9999999999999999999999999999982799898