RPSBLAST alignment for GI: 254780930 and conserved domain: pfam02321
>gnl|CDD|145461 pfam02321, OEP, Outer membrane efflux protein. The OEP family (Outer membrane efflux protein) form trimeric channels that allow export of a variety of substrates in Gram negative bacteria. Each member of this family is composed of two repeats. The trimeric channel is composed of a 12 stranded all beta sheet barrel that spans the outer membrane, and a long all helical barrel that spans the periplasm. Length = 186
Score = 85.6 bits (212), Expect = 3e-17
Identities = 47/178 (26%), Positives = 86/178 (48%), Gaps = 2/178 (1%)
Query: 272 IRNRPDIRYQEKKLADSVAKIGIAKSDLYPSLSLNGSIALTHDNSFPGYNTH--WSFGPK 329
+ N PD++ E ++ + A I +AKS+ P LSL+G +NS G + S G
Sbjct: 9 LENNPDLKAAEAEIEAARANIKLAKSEFLPDLSLSGGYGYNGNNSNGGGDDPRNGSVGLG 68
Query: 330 LYLPIFDKGKIKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHA 389
L P+FD GK ++ ++ A++ + ++ EV A ++ K+ + + A
Sbjct: 69 LSQPLFDGGKRRARVKAAKAQLEAAEAQLEQARRQLRLEVAQAYLNLLAAKEQLELAKQA 128
Query: 390 VELHKKSMSLSMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447
+EL ++++ L+ Y G SLLD+L E + ++L A+ L + L +G
Sbjct: 129 LELAEEALELAEARYEAGLISLLDVLQAEVELLEARLELLEAEADLELARAQLEYLLG 186