RPSBLAST alignment of GI: 254780930 and protein with PDBid: 1ek9
>1ek9_A Outer membrane protein TOLC; integral membrane protein, alpha helical barrel, beta barrel; 2.10A {Escherichia coli} SCOP: f.5.1.1 PDB: 1tqq_A 2vde_A 2vdd_A Length = 428
Score = 177 bits (448), Expect = 6e-45
Identities = 53/408 (12%), Positives = 136/408 (33%), Gaps = 24/408 (5%)
Query: 60 SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-------SYASISHRFIPNL 112
+L ++ + A N + ++ +AA E I R+ L P +Y++
Sbjct: 2 NLMQVYQQARLSNPELRKSAADRDAAFEKINEARSPLLPQLGLGADYTYSNGYRDANGIN 61
Query: 113 KTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172
++ L I + R + + +I +Y + + +
Sbjct: 62 SNATSASLQLTQSIFDMSKWRALTLQEKAAGIQDVTYQTDQQTLILNTATAYFNVLNAID 121
Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232
+S + + ++ + +F G + + A+ ++ ++ T + V
Sbjct: 122 VLSYTQAQKEAIYRQLDQTTQRFNVGLVAITDVQNARAQYDTVLANELTARNNLDNAVEQ 181
Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292
+ + G E + +P + + + + + +I
Sbjct: 182 LRQITGNYYPELAALNVENFKTDKP----QPVNALLKEAEKRNLSLLQARLSQDLAREQI 237
Query: 293 GIAKSDLYPSLSLNGSIALTHDNS-------------FPGYNTHWSFGPKLYLPIFDKGK 339
A+ P+L L S ++ + G LPI+ G
Sbjct: 238 RQAQDGHLPTLDLTASTGISDTSYSGSKTRGAAGTQYDDSNMGQNKVGLSFSLPIYQGGM 297
Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399
+ S +++A+ + + + ++ V ++ +IN + + AV + S+
Sbjct: 298 VNSQVKQAQYNFVGASEQLESAHRSVVQTVRSSFNNINASISSINAYKQAVVSAQSSLDA 357
Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIG 447
Y G +++D+LD + +L+ A+ + +++ A+G
Sbjct: 358 MEAGYSVGTRTIVDVLDATTTLYNAKQELANARYNYLINQLNIKSALG 405