RPSBLAST alignment of GI: 254780930 and SCOP domain: d1ek9a_

Alignment

 Score =  120 bits (300), Expect = 2e-28
 Identities = 53/409 (12%), Positives = 134/409 (32%), Gaps = 24/409 (5%)

Query: 60  SLNKLVKIALQQNLTILQATERINAAKENILSVRADLFPS-------SYASISHRFIPNL 112
           +L ++ + A   N  + ++    +AA E I   R+ L P        +Y++         
Sbjct: 2   NLMQVYQQARLSNPELRKSAADRDAAFEKINEARSPLLPQLGLGADYTYSNGYRDANGIN 61

Query: 113 KTNSTGQLDSDWKIDLFGQRRHIESSLANLDSAYAQVDIAKLNVISKLIPSYIDARHFKE 172
              ++  L     I    + R +                 +  +I     +Y +  +  +
Sbjct: 62  SNATSASLQLTQSIFDMSKWRALTLQEKAAGIQDVTYQTDQQTLILNTATAYFNVLNAID 121

Query: 173 RISIAHQILDLYKKNIELSHLKFTQGATSKLSLVKLEAEIKSIESDIPTLEKSFRMNVHN 232
            +S      +   + ++ +  +F  G  +   +    A+  ++ ++  T   +    V  
Sbjct: 122 VLSYTQAQKEAIYRQLDQTTQRFNVGLVAITDVQNARAQYDTVLANELTARNNLDNAVEQ 181

Query: 233 ISTLLGYPATEFLHYMQKQSNNFQPNLYIPINIGIPADLIRNRPDIRYQEKKLADSVAKI 292
           +  + G    E      +     +P     +      +  +    +         +  +I
Sbjct: 182 LRQITGNYYPELAALNVENFKTDKPQPVNALLK----EAEKRNLSLLQARLSQDLAREQI 237

Query: 293 GIAKSDLYPSLSLNGSI-------------ALTHDNSFPGYNTHWSFGPKLYLPIFDKGK 339
             A+    P+L L  S                               G    LPI+  G 
Sbjct: 238 RQAQDGHLPTLDLTASTGISDTSYSGSKTRGAAGTQYDDSNMGQNKVGLSFSLPIYQGGM 297

Query: 340 IKSNIRRAESSAQEQYITWQETVLNAIKEVENALTSINEDKKIVTKLQHAVELHKKSMSL 399
           + S +++A+ +        +    + ++ V ++  +IN     +   + AV   + S+  
Sbjct: 298 VNSQVKQAQYNFVGASEQLESAHRSVVQTVRSSFNNINASISSINAYKQAVVSAQSSLDA 357

Query: 400 SMINYRQGRYSLLDILDIERATAKVEVDLSIAKRQLAKSYVDLYIAIGS 448
               Y  G  +++D+LD        + +L+ A+     + +++  A+G+
Sbjct: 358 MEAGYSVGTRTIVDVLDATTTLYNAKQELANARYNYLINQLNIKSALGT 406

SCOP domain information

class: Membrane and cell surface proteins and peptides
fold: Outer membrane efflux proteins (OEP)
superfamily: Outer membrane efflux proteins (OEP)
family: Outer membrane efflux proteins (OEP)
domain: Integral outer membrane protein TolC, efflux pump component
species: Escherichia coli [TaxId: 562]