HHsearch alignment for GI: 254780933 and conserved domain: COG0018
>COG0018 ArgS Arginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis].
Probab=99.71 E-value=4.5e-14 Score=121.30 Aligned_cols=165 Identities=21% Similarity=0.270 Sum_probs=100.2
Q ss_pred CCCCCCCHHHHHHHHHCCCCCCHHHHHCCCC----------------------HHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 1443100012255431245653023320254----------------------034445431233556775434110111
Q gi|254780933|r 581 MHALVRDKNGQKMSKSKGNVVDPIDVIDQYG----------------------ADALRFYFSIMAVQGRDINLDLERIAG 638 (947)
Q Consensus 581 ~hG~vld~~G~KMSKS~GNvidp~e~i~~yG----------------------aDalR~~l~~~~~~~~D~~fs~~~i~~ 638 (947)
T Consensus 372 ~~~l~~~~~g~kmStR~G~~vtl~dllde~~era~~~~~~~~~~~~~iA~~vgi~Avry~~l~~~~-~~~~~Fd~d~~ls 450 (577)
T COG0018 372 GVGLVRGGEGVKMSTRAGNVVTLDDLLDEAGERAPEEMEEKEEKNEEIAEVVGIDAVRYADLSRSR-DKDYVFDWDKALS 450 (577)
T ss_pred EEEEEECCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CCCCEEEHHHHHH
T ss_conf 775257787763422488657899999999887666765432115777777524067899886289-9994753999974
Q ss_pred CHH-HH-------HHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC
Q ss_conf 000-01-------2344433332024445776767743331555677999999998889987531001024577765310
Q gi|254780933|r 639 YRN-FI-------TKFWNAIRFSKMKNARHSVSFVPQDVKWIVNKWIIKRLATVINDVTVGMENHRFNDVSAVLYRFVWD 710 (947)
Q Consensus 639 ~r~-f~-------nKLwNa~rf~~~~~~~~~~~~~~~~~~~~~Drwils~l~~~i~~v~~~~e~~~f~~a~~~i~~F~~~ 710 (947)
T Consensus 451 fegNt~pYvQYA~ARi~SIlrka~e~~~~~~-~~~~~~l~~~~E~~L~~~L~~fp~vl~~aa~~~~Ph~la~YL~~LA-~ 528 (577)
T COG0018 451 FEGNTAPYVQYAHARICSILRKAGEDELDLS-TEADALLTELEERELVKKLLEFPEVLEEAAEELEPHRLANYLYDLA-G 528 (577)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC-CCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH-H
T ss_conf 4599721599999999999985444345533-2221010682799999999984999999998569559999999999-9
Q ss_pred CHHHHHHHHHHHHHHCCCHHHHHH---HHHHHHHHHHHHCCCC
Q ss_conf 013688986476530567144432---1000145676403456
Q gi|254780933|r 711 ELCDWYVEFIKSILNQKDSELVSE---TLSCFSYVLYNVCKLL 750 (947)
Q Consensus 711 ~~~~~Yie~~K~~l~~~~~~~~~~---~~~~l~~vl~~~l~ll 750 (947)
T Consensus 529 ~Fn~fY~~-~-~Vl~~~~~~~~~aRL~L~~a~~~vL~ngL~LL 569 (577)
T COG0018 529 SFNSFYNA-C-PVLGAENEELRAARLALVKATRQVLKNGLDLL 569 (577)
T ss_pred HHHHHHHH-C-CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 99999850-8-77789957899999999999999999778760