HHsearch alignment for GI: 254780933 and conserved domain: COG0060
>COG0060 IleS Isoleucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis].
Probab=100.00 E-value=0 Score=1638.07 Aligned_cols=736 Identities=28% Similarity=0.478 Sum_probs=665.0
Q ss_pred CCCCCCHHHHHHHHHHHHHHCCCCCCCC-CCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 8767897898899999998769864453-454899808997284499998654378896779999987670898356778
Q gi|254780933|r 3 IDKTYDFAFIEQKSVEKWNSVDAFRIDV-APKLGSGVFCIAMPPPNVTGSLHMGHAFNTTIQDIMIRFERMRGKNVLWQP 81 (947)
Q Consensus 3 ~~~~y~~~~iE~~~~~~W~~~~~f~~~~-~~~~~~~~f~~~~ppP~~nG~lHiGH~~~~t~~Di~~Ry~rm~G~~Vl~~~ 81 (947)
T Consensus 14 fpmr~~l~~~E~~i~~~W~e~~iy~k~~~~~~~g~~~FvfhDGPPyANG~iHiGHalnKilKDiI~Ry~~m~G~~v~~~p 93 (933)
T COG0060 14 FPMRANLPKKEPKILKFWEENDIYEKIREERNKGKPKFVLHDGPPYANGNIHIGHALNKILKDIIVRYKTMQGYDVPYVP 93 (933)
T ss_pred CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 77669923418899988887369999999973899808974799977898226566776666634333204588589889
Q ss_pred CCCCCCHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCEECCCHHHHHHHHHHH
Q ss_conf 81545408999999997674599877779899999999999999999999999808366427981158867999999999
Q gi|254780933|r 82 GTDHAGIATQITVESRLFAQSSLTREDIGRDAFIEKVWEWKKESGGSILSQLKRLGASCDWSRERFTMDEGMSNAVRNAF 161 (947)
Q Consensus 82 G~D~~GlPiE~~vek~l~~~~~~~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~lG~~~Dw~r~y~T~d~~y~~~v~~~F 161 (947)
T Consensus 94 GWDcHGLPIE~~vek~lg~-~k~~i~~~~~~efr~~Cr~~a~~~v~~q~~~f~RLGv~~Dw~npY~Tmd~~ye~~~~~~f 172 (933)
T COG0060 94 GWDCHGLPIELKVEKKLGI-GKKDIESFGVEEFREKCREFALEQVDEQKEQFKRLGVWGDWENPYKTMDPSYEESVWWAF 172 (933)
T ss_pred CCCCCCCHHHHHHHHHHCC-CCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEECCCHHHHHHHHHHH
T ss_conf 9767882288999998287-631143348999999999999999999999987636763268980327889999999999
Q ss_pred HHHHHCCCEEECCCEEEECCCCCCCCCHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC
Q ss_conf 99998894331332022037767801486865414687669999653045300012455555442456887169998267
Q gi|254780933|r 162 VVLYKDGLIYRDKRIVNWDPSLKTSVSDLEVIQKEVDGNLWYVRYPLVEGVTYRHPIKFDDDAKPIDWEVRDYIIVSTTR 241 (947)
Q Consensus 162 ~~L~~~gliy~~~~~v~w~p~~~T~ls~~Ev~~~~~~~~~~~ik~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~Ttr 241 (947)
T Consensus 173 ~~~~~kGllyrg~Kpv~wsp~c~TaLAeaEvey~d~~dpSIyV~F~v~~~------------~----~~~~~~lviWTTT 236 (933)
T COG0060 173 KELYEKGLLYRGYKPVPWSPRCETALAEAEVEYGDVKDPSIYVKFPVKDE------------G----LDENAYLVIWTTT 236 (933)
T ss_pred HHHHHCCCEECCCEEEEECCCCCCCHHHHHHCCCCCCCCEEEEEEEECCC------------C----CCCCCEEEEEECC
T ss_conf 99997797522770012268777600366640256689628999773357------------8----8777079999489
Q ss_pred CCHHCHHHHHHHHHCC------------------------------------HHHHHHCCCEEEECCCC----CCCCCCC
Q ss_conf 4010102444444100------------------------------------01231115423320248----6573210
Q gi|254780933|r 242 PETMFGDVAIAVHPDD------------------------------------YRYKELIGKYATLPIVG----RLIPIVS 281 (947)
Q Consensus 242 PeTl~g~~a~~v~P~d------------------------------------~~y~~l~G~~~~~Pl~~----~~ipi~~ 281 (947)
T Consensus 237 PWTLPaN~aiav~pd~~Y~lv~~~~~~~IlA~~lve~~~~~~~~~~~~vl~~~kG~~Leg~~y~hPf~~~~~~~~~~vi~ 316 (933)
T COG0060 237 PWTLPANLAIAVHPDLDYVLVEVNGEKLILAKALVESVAKKAGVEDYEVLETFKGSELEGLRYEHPFYDFVYDRAFPVIL 316 (933)
T ss_pred CCCCHHCCEEEECCCCCEEEEEECCEEEEEHHHHHHHHHHHCCCCCEEEEEEEEHHHHCCCEEECCCCCCCCCCEEEEEE
T ss_conf 87731004367679851699997888999829989999987098420776775536628787648876545456046885
Q ss_pred CCCCCCCCCCCEEEECCCCCHHHHHHHHHCC-CCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 0003421223203212477855656643046-531110167775213665444555434655465553100151233448
Q gi|254780933|r 282 DVYPDPEFGDGAVKVTPAHDFNDFEIAKRHG-LGFINILTPEAKIFLSENESFLENIVLSDEARNIFSEFEGLDCFAARS 360 (947)
Q Consensus 282 ~~~V~~~~GTG~V~~~Pah~~~Dy~~~~~~~-l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~a~~ 360 (947)
T Consensus 317 gd~VT~d~GTG~VHtAPghGeeDy~vg~~~g~l~v~~pVD~~G~yt~~~------------------~~~~G~~v~dAn~ 378 (933)
T COG0060 317 GDHVTLDDGTGLVHTAPGHGEEDYEVGKKYGLLEVLNPVDDNGRYTEEA------------------PKYEGLFVKDANK 378 (933)
T ss_pred CCEEECCCCCCCEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC------------------HHHCCCEECCCCH
T ss_conf 2767227984105638989878999999829967646668885566654------------------3217824000789
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEHHHEECCCCCHHHHHHHHHCCCCCEECCCCCHHHHHHHHCCCC
Q ss_conf 88998888764333210223222356665532444312221214542023334320024411214431135676410111
Q gi|254780933|r 361 KIVSLLEKSNLLDKTDSYRHIVPHCERSGVTIEPCITEQWYLDAKVLAESAIRSAKNGCLSFIPQSWDKSYYEWLENIQP 440 (947)
Q Consensus 361 ~ii~~L~~~g~l~~~~~~~h~~p~c~R~~~~i~~~~~~QWfi~~~~~~~~~l~~~~~~~i~~~P~~~~~~~~~wl~~~~D 440 (947)
T Consensus 379 ~Ii~~Lk~~g~Ll~~e~i~HsYPhcWR~ktPlIyRAt~QWFi~v~~~r~~~l~~i~--~v~w~P~~~~~R~~~mve~r~D 456 (933)
T COG0060 379 KIIEDLKEKGNLLKSEKIEHSYPHCWRTKTPLIYRATPQWFVSVDKLRDKMLKEIN--KVNWVPDWGKNRFGNMVENRPD 456 (933)
T ss_pred HHHHHHHHCCCEEEEEEEEECCCCCCCCCCEEEEEECCHHEEEHHHHHHHHHHHHH--CCEEECHHHHHHHHHHHCCCCC
T ss_conf 99999986795315335775798666789806985052033678889999999985--5568871578999999718986
Q ss_pred CCCCCCCCCCCCEEEEECCCCCEEECCCCHHHHHHCCCCCCCCCC-CCCC-CCCCCCCCCCCCCCEEECCCEECCEEECC
Q ss_conf 232123545631026983899887657623445420345567877-6555-41002568888310188241002202044
Q gi|254780933|r 441 WCISRQIWWGHQIPVWYSPDGKLFVENTEDAALRSAIDYYLSQDN-DMTV-KVRKMIKDGNISDLLKRDEDVLDTWFSSA 518 (947)
Q Consensus 441 W~ISRqr~WG~pIPvw~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~r~~DvlDtWfdSg 518 (947)
T Consensus 457 W~ISRQR~WGvPiPi~~~~~~g~~~~~~~El~e~~~~~~~~~g~~~w~~~~idel~~~~~~~g~~~~rv~DvlDVWFDSG 536 (933)
T COG0060 457 WCISRQRYWGVPIPVWYCKETGEILVITEELEELVGQLVEEKGIDDWHRPDIDELLPPCPEDGKEYRRVPDVLDVWFDSG 536 (933)
T ss_pred CEEECCCCCCCCEEEEEECCCCCEECCHHHHHHHHHHHHHHCCCHHHHCCCHHHHCCCCCCCCCEEEECCCCEEEEECCC
T ss_conf 43651666788533799889997423289999999877432172665156347645788887650596575468887378
Q ss_pred CCCCCEECHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHCC
Q ss_conf 23332010111100012345553012455432101356777665301211337868520000144310001225543124
Q gi|254780933|r 519 LWPFASLGWPEQTAELKTYYPTSVLVTGFDILFFWVARMMMMGLYFMKDAEGKGIEPFHIVYMHALVRDKNGQKMSKSKG 598 (947)
Q Consensus 519 ~~p~~~l~~p~~~~e~~~~~P~d~~~~G~Di~r~W~~~~l~~~~~l~~~~~~~~~~Pfk~v~~hG~vld~~G~KMSKS~G 598 (947)
T Consensus 537 s~~~a~~~-~~~~~~~~~~~-aD~~lEGsDQ~RGWF~Ssl~~s~a~~------~~aPYk~vltHGfvlDe~GrKMSKSlG 608 (933)
T COG0060 537 STPYAVLH-PRENLKFPALF-ADFYLEGSDQTRGWFYSSLLTSTALF------GRAPYKNVLTHGFVLDEKGRKMSKSLG 608 (933)
T ss_pred CCCCCCCC-CCCCCCCCCCC-CCEEEEECCCCCHHHHHHHHHHHHHC------CCCHHHHHHHCCCEECCCCCCCCCCCC
T ss_conf 97111107-75444676555-75799706655226899999999972------885078776326178888887655578
Q ss_pred CCCCHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC--CCCCCCCHHHHH
Q ss_conf 565302332025403444543123355677543411011100001234443333202444577676--774333155567
Q gi|254780933|r 599 NVVDPIDVIDQYGADALRFYFSIMAVQGRDINLDLERIAGYRNFITKFWNAIRFSKMKNARHSVSF--VPQDVKWIVNKW 676 (947)
Q Consensus 599 Nvidp~e~i~~yGaDalR~~l~~~~~~~~D~~fs~~~i~~~r~f~nKLwNa~rf~~~~~~~~~~~~--~~~~~~~~~Drw 676 (947)
T Consensus 609 N~v~P~~V~~~yGADiLRLwv~ssd-~~~dl~~s~~il~~~~~~~r~irNt~rF~l~nl~~fdp~~~~~~~~~~~~~Drw 687 (933)
T COG0060 609 NVVDPQDVIDKYGADILRLWVASSD-YWEDLRFSDEILKQVREVYRKIRNTYRFLLGNLDDFDPKKDAVLPEELRELDRW 687 (933)
T ss_pred CCCCHHHHHHHHCCHHEEEEEEECC-CHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCHHHHH
T ss_conf 8189899987627634046656158-230320278899999999999999999998850589942133514442321799
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCC--CHHHHHHHHHHHHHHHHHHCCCCCCCH
Q ss_conf 799999999888998753100102457776531001368898647653056--714443210001456764034567744
Q gi|254780933|r 677 IIKRLATVINDVTVGMENHRFNDVSAVLYRFVWDELCDWYVEFIKSILNQK--DSELVSETLSCFSYVLYNVCKLLHPII 754 (947)
Q Consensus 677 ils~l~~~i~~v~~~~e~~~f~~a~~~i~~F~~~~~~~~Yie~~K~~l~~~--~~~~~~~~~~~l~~vl~~~l~ll~P~~ 754 (947)
T Consensus 688 il~rl~~l~~~v~eaye~y~f~~v~~~l~~F~~~dLS~~Yld~~kdr~y~~~~~s~~rraa~~~Ly~il~~l~~~lAPil 767 (933)
T COG0060 688 ILSRLNSLVKEVREAYENYDFHKVVRALMNFVSEDLSNWYLDIIKDRLYTEAADSPDRRAAQTTLYHILKALVRLLAPIL 767 (933)
T ss_pred HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99999999999999998467999999999998856658898887887640479998899999999999999999971010
Q ss_pred HHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCC
Q ss_conf 899999997435666767565366357878774
Q gi|254780933|r 755 PFVTEDLYSHVSPQDDMDKQGLLCHAQWPSLII 787 (947)
Q Consensus 755 PfitEeiw~~l~~~~~~~~~~si~~~~wP~~~~ 787 (947)
T Consensus 768 PftaEeiw~~l~~~~~---~eSVhl~~~p~~~~ 797 (933)
T COG0060 768 PFTAEEIWQNLPGERK---EESVHLEDWPEVDE 797 (933)
T ss_pred HHHHHHHHHHCCCCCC---CCEEEECCCCCCCC
T ss_conf 3659999974766788---75367035765543