HHsearch alignment for GI: 254780933 and conserved domain: PRK05710
>PRK05710 glutamyl-Q tRNA(Asp) synthetase; Reviewed.
Probab=97.74 E-value=0.00047 Score=48.06 Aligned_cols=88 Identities=24% Similarity=0.361 Sum_probs=57.3
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHH
Q ss_conf 49999865437889677999998767089835677881545408999999997674599877779899999999999999
Q gi|254780933|r 46 PNVTGSLHMGHAFNTTIQDIMIRFERMRGKNVLWQPGTDHAGIATQITVESRLFAQSSLTREDIGRDAFIEKVWEWKKES 125 (947)
Q Consensus 46 P~~nG~lHiGH~~~~t~~Di~~Ry~rm~G~~Vl~~~G~D~~GlPiE~~vek~l~~~~~~~~~~~g~~~f~~~~~~~~~~~ 125 (947)
T Consensus 11 PSPTG~LHlG~~rtAl~n~l~Ar~--~~G~~iLRIEDtD~~R---------------------------------~~~~~ 55 (299)
T PRK05710 11 PSPSGPLHFGSLVSALLSYLDARA--QGGRWLVRIEDIDPPR---------------------------------EVPGA 55 (299)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHH--HCCEEEEEECCCCCCC---------------------------------CCHHH
T ss_conf 699985328999999999999998--2998999867789765---------------------------------87689
Q ss_pred HHHHHHHHHHHCCEEECCCCEECCCHHHHHHHHHHHHHHHHCCCEE
Q ss_conf 9999999998083664279811588679999999999999889433
Q gi|254780933|r 126 GGSILSQLKRLGASCDWSRERFTMDEGMSNAVRNAFVVLYKDGLIY 171 (947)
Q Consensus 126 ~~~~~~~~~~lG~~~Dw~r~y~T~d~~y~~~v~~~F~~L~~~gliy 171 (947)
T Consensus 56 ~~~Il~~L~wlGl--~wD~~~~~-QS~R~~~Y~~~~~~L~~~g~aY 98 (299)
T PRK05710 56 AAAILADLEWLGL--HWDGPVRR-QSERHDAYRAALDRLAAAGLVY 98 (299)
T ss_pred HHHHHHHHHHHCC--CCCCCCHH-HHHHHHHHHHHHHHHHHCCCCE
T ss_conf 9999999999568--88874048-8858999999999999769902