HHsearch alignment for GI: 254780933 and conserved domain: PRK12418

Probab=99.83  E-value=7.6e-19  Score=156.18  Aligned_cols=141  Identities=19%  Similarity=0.153  Sum_probs=103.5

Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHCC-CCHHHHHH
Q ss_conf             55301245543210135677766530121133786852000014431000122554312456530233202-54034445
Q gi|254780933|r  539 PTSVLVTGFDILFFWVARMMMMGLYFMKDAEGKGIEPFHIVYMHALVRDKNGQKMSKSKGNVVDPIDVIDQ-YGADALRF  617 (947)
Q Consensus       539 P~d~~~~G~Di~r~W~~~~l~~~~~l~~~~~~~~~~Pfk~v~~hG~vld~~G~KMSKS~GNvidp~e~i~~-yGaDalR~  617 (947)
T Consensus       214 ~~DIHgGG~DL~FPHHENEiAQsea~~------g~~~~a~yW~H~g~l~~~geKMSKSlGN~i~i~dl~~~g~~p~~~R~  287 (384)
T PRK12418        214 GFDIQGGGSDLIFPHHEFSAAHAEAAT------GERRFARHYVHAGMIGLDGEKMSKSRGNLVFVSRLRAAGVDPAAIRL  287 (384)
T ss_pred             CEEEECCCCCCCCCCCHHHHHHHHHHH------CCCHHHHHHHHHCEEEECCEECCCCCCCEEEHHHHHHCCCCHHHHHH
T ss_conf             767846862565888354999999865------89748788860042668886745668871469999863898799999


Q ss_pred             HHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-HHHC
Q ss_conf             431233556775434110111000012344433332024445776767743331555677999999998889987-5310
Q gi|254780933|r  618 YFSIMAVQGRDINLDLERIAGYRNFITKFWNAIRFSKMKNARHSVSFVPQDVKWIVNKWIIKRLATVINDVTVGM-ENHR  696 (947)
Q Consensus       618 ~l~~~~~~~~D~~fs~~~i~~~r~f~nKLwNa~rf~~~~~~~~~~~~~~~~~~~~~Drwils~l~~~i~~v~~~~-e~~~  696 (947)
T Consensus       288 ~lL~~hYR-~~l~fs~~~l~~A~~~l~r~~~a~~~-------~--~-~~-------------~~~~~~~~~~~al~DDlN  343 (384)
T PRK12418        288 ALLAGHYR-SDREWTDAVLAEAEARLARWRAATAL-------P--A-GP-------------DAADVVARVREYLADDLD  343 (384)
T ss_pred             HHHCCCCC-CCCCCCHHHHHHHHHHHHHHHHHHHC-------C--C-CC-------------CHHHHHHHHHHHHHHCCC
T ss_conf             99705679-97688999999999999999998716-------6--7-88-------------668899999999874265


Q ss_pred             CCHHHHHHHHHHH
Q ss_conf             0102457776531
Q gi|254780933|r  697 FNDVSAVLYRFVW  709 (947)
Q Consensus       697 f~~a~~~i~~F~~  709 (947)
T Consensus       344 TP~Ala~l~~l~~  356 (384)
T PRK12418        344 TPGALAAVDGWAT  356 (384)
T ss_pred             HHHHHHHHHHHHH
T ss_conf             5899999999999