HHsearch alignment for GI: 254780933 and conserved domain: TIGR03447
>TIGR03447 mycothiol_MshC cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase. Members of this protein family are MshC, l-cysteine:1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase, an enzyme that uses ATP to ligate a Cys residue to a mycothiol precursor molecule, in the second to last step in mycothiol biosynthesis. This enzyme shows considerable homology to Cys--tRNA ligases, and many instances are misannotated as such. Mycothiol is found in Mycobacterium tuberculosis, Corynebacterium glutamicum, Streptomyces coelicolor, and various other members of the Actinobacteria. Mycothiol is an analog to glutathione.
Probab=99.83 E-value=5e-19 Score=157.53 Aligned_cols=141 Identities=16% Similarity=0.155 Sum_probs=104.6
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCC-CCCCHHHHHHHHHCCCCCCHHHHHCC-CCHHHHH
Q ss_conf 553012455432101356777665301211337868520000144-31000122554312456530233202-5403444
Q gi|254780933|r 539 PTSVLVTGFDILFFWVARMMMMGLYFMKDAEGKGIEPFHIVYMHA-LVRDKNGQKMSKSKGNVVDPIDVIDQ-YGADALR 616 (947)
Q Consensus 539 P~d~~~~G~Di~r~W~~~~l~~~~~l~~~~~~~~~~Pfk~v~~hG-~vld~~G~KMSKS~GNvidp~e~i~~-yGaDalR 616 (947)
T Consensus 241 ~~DIHgGG~DL~FPHHENEiAQsea~~------g~~~~a~yWmH~g~l-~~~geKMSKSlGN~~ti~dl~~~g~~p~~iR 313 (411)
T TIGR03447 241 GFDIQGGGSDLIFPHHEFSAAHAEAAT------GVRRMARHYVHAGMI-GLDGEKMSKSLGNLVFVSKLRAAGVDPAAIR 313 (411)
T ss_pred CEEEECCCCCCCCCCCHHHHHHHHHHH------CCCHHHHHHHECCEE-EECCEECCCCCCCEEEHHHHHHCCCCHHHHH
T ss_conf 757878860357888530999999866------887376676530023-1287055666887257999986499899999
Q ss_pred HHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-HHH
Q ss_conf 5431233556775434110111000012344433332024445776767743331555677999999998889987-531
Q gi|254780933|r 617 FYFSIMAVQGRDINLDLERIAGYRNFITKFWNAIRFSKMKNARHSVSFVPQDVKWIVNKWIIKRLATVINDVTVGM-ENH 695 (947)
Q Consensus 617 ~~l~~~~~~~~D~~fs~~~i~~~r~f~nKLwNa~rf~~~~~~~~~~~~~~~~~~~~~Drwils~l~~~i~~v~~~~-e~~ 695 (947)
T Consensus 314 ~~lL~~HYR-spl~fs~~~L~~A~~~l~r~~~a~~~~------------~~~-----------~~~~~~~~~~~Al~DDl 369 (411)
T TIGR03447 314 LGLLAGHYR-QDRDWTDAVLAEAEARLARWRAALAAT------------DAP-----------DATDLIARLRQHLANDL 369 (411)
T ss_pred HHHHCCCCC-CCCCCCHHHHHHHHHHHHHHHHHHHCC------------CCC-----------CHHHHHHHHHHHHHCCC
T ss_conf 999714489-976889899999999999999987266------------775-----------22679999999986016
Q ss_pred CCCHHHHHHHHHHHC
Q ss_conf 001024577765310
Q gi|254780933|r 696 RFNDVSAVLYRFVWD 710 (947)
Q Consensus 696 ~f~~a~~~i~~F~~~ 710 (947)
T Consensus 370 NTp~Ala~l~~~~~~ 384 (411)
T TIGR03447 370 DTPAALAAVDNWAAA 384 (411)
T ss_pred CCHHHHHHHHHHHHH
T ss_conf 729999999999999