HHsearch alignment for GI: 254780933 and conserved domain: cd00802

>cd00802 class_I_aaRS_core Class I amino acyl-tRNA synthetase (aaRS) catalytic core domain. These enzymes are mostly monomers, which aminoacylate the 2'-OH of the nucleotide at the 3' of the appropriate tRNA. The core domain is based on the Rossman fold and is responsible for the ATP-dependent formation of the enzyme bound aminoacyl-adenylate. It contains the characteristic class I HIGH and KMSKS motifs, which are involved in ATP binding.
Probab=99.67  E-value=5.7e-17  Score=142.48  Aligned_cols=72  Identities=33%  Similarity=0.467  Sum_probs=60.7

Q ss_pred             EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHH
Q ss_conf             97284499998654378896779999987670898356778815454089999999976745998777798999999999
Q gi|254780933|r   41 IAMPPPNVTGSLHMGHAFNTTIQDIMIRFERMRGKNVLWQPGTDHAGIATQITVESRLFAQSSLTREDIGRDAFIEKVWE  120 (947)
Q Consensus        41 ~~~ppP~~nG~lHiGH~~~~t~~Di~~Ry~rm~G~~Vl~~~G~D~~GlPiE~~vek~l~~~~~~~~~~~g~~~f~~~~~~  120 (947)
T Consensus         2 i~~~~p~ptG~lHiGh~~~~~~~~~~ar~~-----~~~~~~~idd~~~~~~~~a~~~~-----------------~~~~~   59 (142)
T cd00802           2 ITRPGPYPTGPLHIGHARTALLNDVLARYG-----NVLFILGIDDTGLPIEDKAEKEG-----------------KLPKE   59 (142)
T ss_pred             EECCCCCCCCCCCHHHHHHHHHHHHHHHHC-----CCEEEEEECCCCCCCCCHHHHHC-----------------CCCHH
T ss_conf             141488989964188999999999999981-----99899986579920011678844-----------------48899


Q ss_pred             HHHHHHHHHHHHHH
Q ss_conf             99999999999999
Q gi|254780933|r  121 WKKESGGSILSQLK  134 (947)
Q Consensus       121 ~~~~~~~~~~~~~~  134 (947)
T Consensus        60 ~~~~~~~~~~~~~~   73 (142)
T cd00802          60 EVEENIEEIKEDLK   73 (142)
T ss_pred             HHHHHHHHHHHHCE
T ss_conf             99999999998652