HHsearch alignment for GI: 254780933 and conserved domain: cd00802
>cd00802 class_I_aaRS_core Class I amino acyl-tRNA synthetase (aaRS) catalytic core domain. These enzymes are mostly monomers, which aminoacylate the 2'-OH of the nucleotide at the 3' of the appropriate tRNA. The core domain is based on the Rossman fold and is responsible for the ATP-dependent formation of the enzyme bound aminoacyl-adenylate. It contains the characteristic class I HIGH and KMSKS motifs, which are involved in ATP binding.
Probab=99.67 E-value=5.7e-17 Score=142.48 Aligned_cols=72 Identities=33% Similarity=0.467 Sum_probs=60.7
Q ss_pred EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHH
Q ss_conf 97284499998654378896779999987670898356778815454089999999976745998777798999999999
Q gi|254780933|r 41 IAMPPPNVTGSLHMGHAFNTTIQDIMIRFERMRGKNVLWQPGTDHAGIATQITVESRLFAQSSLTREDIGRDAFIEKVWE 120 (947)
Q Consensus 41 ~~~ppP~~nG~lHiGH~~~~t~~Di~~Ry~rm~G~~Vl~~~G~D~~GlPiE~~vek~l~~~~~~~~~~~g~~~f~~~~~~ 120 (947)
T Consensus 2 i~~~~p~ptG~lHiGh~~~~~~~~~~ar~~-----~~~~~~~idd~~~~~~~~a~~~~-----------------~~~~~ 59 (142)
T cd00802 2 ITRPGPYPTGPLHIGHARTALLNDVLARYG-----NVLFILGIDDTGLPIEDKAEKEG-----------------KLPKE 59 (142)
T ss_pred EECCCCCCCCCCCHHHHHHHHHHHHHHHHC-----CCEEEEEECCCCCCCCCHHHHHC-----------------CCCHH
T ss_conf 141488989964188999999999999981-----99899986579920011678844-----------------48899
Q ss_pred HHHHHHHHHHHHHH
Q ss_conf 99999999999999
Q gi|254780933|r 121 WKKESGGSILSQLK 134 (947)
Q Consensus 121 ~~~~~~~~~~~~~~ 134 (947)
T Consensus 60 ~~~~~~~~~~~~~~ 73 (142)
T cd00802 60 EVEENIEEIKEDLK 73 (142)
T ss_pred HHHHHHHHHHHHCE
T ss_conf 99999999998652