HHsearch alignment for GI: 254780933 and conserved domain: cd07958

>cd07958 Anticodon_Ia_Leu_BEm Anticodon-binding domain of bacterial and eukaryotic mitochondrial leucyl tRNA synthetases. This domain is found in leucyl tRNA synthetases (LeuRS), which belong to the class Ia aminoacyl tRNA synthetases. It lies C-terminal to the catalytic core domain. In contrast to other class Ia enzymes, the anticodon is not used as an identity element in LeuRS (with exceptions such as Saccharomyces cerevisiae and some other eukaryotes). No anticodon-binding site can be defined for this family, which includes bacterial and eukaryotic mitochondrial members, as well as LeuRS from the archaeal Halobacteria. LeuRS catalyzes the transfer of leucine to the 3'-end of its tRNA.
Probab=99.78  E-value=2.9e-19  Score=159.28  Aligned_cols=117  Identities=21%  Similarity=0.321  Sum_probs=88.6

Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC
Q ss_conf             34110111000012344433332024445776767743331555677999999998889987531001024577765310
Q gi|254780933|r  631 LDLERIAGYRNFITKFWNAIRFSKMKNARHSVSFVPQDVKWIVNKWIIKRLATVINDVTVGMENHRFNDVSAVLYRFVWD  710 (947)
Q Consensus       631 fs~~~i~~~r~f~nKLwNa~rf~~~~~~~~~~~~~~~~~~~~~Drwils~l~~~i~~v~~~~e~~~f~~a~~~i~~F~~~  710 (947)
T Consensus         1 Wse~gIeg~~rFl~KlW~l~~~~~~----~~~~~~~~~~~~~~d~~i~~~l~~~i~~vt~~~e~~~fN~aia~l~ef~-N   75 (117)
T cd07958           1 WSDSGVEGAYRFLNRVWRLVTELAE----ALAAPAAAAELSEEDKELRRKLHKTIKKVTEDIERLRFNTAIAALMELV-N   75 (117)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHH----HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH-H
T ss_conf             9800699999999999999998886----3134556544667449999999999999999998522059999999999-9


Q ss_pred             CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHC
Q ss_conf             0136889864765305671444321000145676403456774489999999743
Q gi|254780933|r  711 ELCDWYVEFIKSILNQKDSELVSETLSCFSYVLYNVCKLLHPIIPFVTEDLYSHV  765 (947)
Q Consensus       711 ~~~~~Yie~~K~~l~~~~~~~~~~~~~~l~~vl~~~l~ll~P~~PfitEeiw~~l  765 (947)
T Consensus        76 ~l~~-------~~--~~~----~~~~~~~~~~l~~ll~lL~P~~PHiaEElW~~L  117 (117)
T cd07958          76 ALYK-------YK--KKD----AQHAAVLREALETLVLLLAPFAPHIAEELWEEL  117 (117)
T ss_pred             HHHH-------HH--CCC----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             9988-------46--144----114999999999999998842479999998539