HHsearch alignment for GI: 254780933 and conserved domain: pfam00133
>pfam00133 tRNA-synt_1 tRNA synthetases class I (I, L, M and V). Other tRNA synthetase sub-families are too dissimilar to be included.
Probab=100.00 E-value=0 Score=1341.20 Aligned_cols=570 Identities=45% Similarity=0.767 Sum_probs=524.5
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 99999987698644534548998089972844999986543788967799999876708983567788154540899999
Q gi|254780933|r 15 KSVEKWNSVDAFRIDVAPKLGSGVFCIAMPPPNVTGSLHMGHAFNTTIQDIMIRFERMRGKNVLWQPGTDHAGIATQITV 94 (947)
Q Consensus 15 ~~~~~W~~~~~f~~~~~~~~~~~~f~~~~ppP~~nG~lHiGH~~~~t~~Di~~Ry~rm~G~~Vl~~~G~D~~GlPiE~~v 94 (947)
T Consensus 1 eiq~~W~~~~~f~~~~~~~~~k~kf~i~~~pPY~nG~lH~GH~~~~t~~D~~aRy~rm~G~~Vl~p~GwD~~GlPiE~~v 80 (606)
T pfam00133 1 QIYQFWDEQGYFKKSLENGKGKPSFTIHDGPPNATGLLHIGHALNKTLKDIVIRYKRMQGFDVLWVPGWDHHGLPTEQKV 80 (606)
T ss_pred CHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 96789875799057633479999589970898978850242668789999999999828997799884561439999999
Q ss_pred HHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCEECCCHHHHHHHHHHHHHHHHCCCEEECC
Q ss_conf 99976745998777798999999999999999999999998083664279811588679999999999999889433133
Q gi|254780933|r 95 ESRLFAQSSLTREDIGRDAFIEKVWEWKKESGGSILSQLKRLGASCDWSRERFTMDEGMSNAVRNAFVVLYKDGLIYRDK 174 (947)
Q Consensus 95 ek~l~~~~~~~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~lG~~~Dw~r~y~T~d~~y~~~v~~~F~~L~~~gliy~~~ 174 (947)
T Consensus 81 ek~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~DW~r~~~T~dp~y~~~~~w~F~~L~~~Gliyr~~ 160 (606)
T pfam00133 81 EKKLGIKGKKDRHKLGREKFREKCREWKMEYADEIRSQFKRLGVSGDWDREYFTLDPGLEAAVWRVFVRLHDKGLIYRGK 160 (606)
T ss_pred HHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 99742115998365799999999999999999999999998291264588725278125499999999999779817751
Q ss_pred CEEEECCCCCCCCCHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHCHHHHHHHH
Q ss_conf 20220377678014868654146876699996530453000124555554424568871699982674010102444444
Q gi|254780933|r 175 RIVNWDPSLKTSVSDLEVIQKEVDGNLWYVRYPLVEGVTYRHPIKFDDDAKPIDWEVRDYIIVSTTRPETMFGDVAIAVH 254 (947)
Q Consensus 175 ~~v~w~p~~~T~ls~~Ev~~~~~~~~~~~ik~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~TtrPeTl~g~~a~~v~ 254 (947)
T Consensus 161 ~~V~wcp~~~T~La~~Ev~~~d~~~~~~~v~f~l~~~-------------------~~~~l~i~TTrPeTl~g~~~l~v~ 221 (606)
T pfam00133 161 KPVNWSPALNTALSEAEVEYKDVKGPSIHVAFPLADG-------------------KGASLVIWTTTPWTLPGNTAVAVN 221 (606)
T ss_pred EEECCCCCCCEECCCCCEEECCCCCCEEEEECCCCCC-------------------CCCEEEEEECCCCCCCCCEEEEEC
T ss_conf 5501244254122444021000333035650445789-------------------876699994354200365368988
Q ss_pred HC-----------------------------------CHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCC
Q ss_conf 10-----------------------------------0012311154233202486573210000342122320321247
Q gi|254780933|r 255 PD-----------------------------------DYRYKELIGKYATLPIVGRLIPIVSDVYPDPEFGDGAVKVTPA 299 (947)
Q Consensus 255 P~-----------------------------------d~~y~~l~G~~~~~Pl~~~~ipi~~~~~V~~~~GTG~V~~~Pa 299 (947)
T Consensus 222 p~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~G~~~~~P~~~~~ipv~~~~~V~~~~GTG~V~~vPa 301 (606)
T pfam00133 222 PEFNYVKIRVTGEYYILAEALLKSLYKKKKEDGEILEDFRGKELIGKKYIHPFVNREIPIIADDYVDMEFGTGAVHIAPA 301 (606)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEECCCEEECCCCCCEEEEEECCCCCCCCCCCCEECCCC
T ss_conf 88765104438606789999999997403302433313345231277897887897578995464156668771333677
Q ss_pred CCHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 78556566430465311101677752136654445554346554655531001512334488899888876433321022
Q gi|254780933|r 300 HDFNDFEIAKRHGLGFINILTPEAKIFLSENESFLENIVLSDEARNIFSEFEGLDCFAARSKIVSLLEKSNLLDKTDSYR 379 (947)
Q Consensus 300 h~~~Dy~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~a~~~ii~~L~~~g~l~~~~~~~ 379 (947)
T Consensus 302 h~~~D~~~~~k~~l~~~~~i~~~g~~~~~------------------~~~~~G~~v~~a~~~ii~~L~~~g~l~~~~~~~ 363 (606)
T pfam00133 302 HGEDDYEVGKRHNLEFINPVDDDGTYNEE------------------APEFQGLKRFKARKKIVELLTEKGLLLKIEPIE 363 (606)
T ss_pred CCHHHHHHHHHCCCCCEEEECCCCEECCC------------------CCCCCCCEEEECCHHHHHHHHHCCCEEEEEEEC
T ss_conf 77799999998399850244898846676------------------511158525602189999788689866532201
Q ss_pred CCCCCCCCCCCCEEEEEEHHHEECCCCCHHHHHHHHHCCCCCEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEECC
Q ss_conf 32223566655324443122212145420233343200244112144311356764101112321235456310269838
Q gi|254780933|r 380 HIVPHCERSGVTIEPCITEQWYLDAKVLAESAIRSAKNGCLSFIPQSWDKSYYEWLENIQPWCISRQIWWGHQIPVWYSP 459 (947)
Q Consensus 380 h~~p~c~R~~~~i~~~~~~QWfi~~~~~~~~~l~~~~~~~i~~~P~~~~~~~~~wl~~~~DW~ISRqr~WG~pIPvw~~~ 459 (947)
T Consensus 364 ~~~p~~~R~~~~vi~~~~~QWFi~~~~~k~~~~~~~~--~~~~~P~~~~~~~~~~l~~l~DW~iSRQR~WGtPIPi~~~~ 441 (606)
T pfam00133 364 HSYPHCWRSGTPIIYRATPQWFVRMKNLAEAALKAVE--KVQFVPKWGEKRYGNWLENIQDWCISRQRWWGHPIPAWYSK 441 (606)
T ss_pred CCCCEECCCCCEEEEEECHHHHHHHHHHHHHHHHHHH--HHHCCCHHHCCHHHEEECCCCCCEEEEECCCCCCCCEEECC
T ss_conf 0155554789479996027877755999999998644--33027501012033055256563575414678732269837
Q ss_pred CCCEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCEECCEEECCCCCCCEECHHH-HHHCCCCCC
Q ss_conf 9988765762344542034556787765554100256888831018824100220204423332010111-100012345
Q gi|254780933|r 460 DGKLFVENTEDAALRSAIDYYLSQDNDMTVKVRKMIKDGNISDLLKRDEDVLDTWFSSALWPFASLGWPE-QTAELKTYY 538 (947)
Q Consensus 460 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~DvlDtWfdSg~~p~~~l~~p~-~~~e~~~~~ 538 (947)
T Consensus 442 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~re~DtmDtwfdSg~~~~~~~~~p~~~~~~f~~~~ 519 (606)
T pfam00133 442 DTGEVYVRGSLKELVAGREE--EEGIEAWLHRDAKDLLGKGAGTLEQDEDVLDTWFSSGSWPFSTLGYPFTNTPEFKRFF 519 (606)
T ss_pred CCCCCCCCCHHHHHHHHHHC--CCCCCCCCCCCHHHHCCCCCCCEEECCEEEECEECCCCCHHHHHCCCHHCHHHHHCCC
T ss_conf 89831675024555544304--6675310121246553578875156776120211177568988478512769895388
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHH
Q ss_conf 55301245543210135677766530121133786852000014431000122554312456530233202540344454
Q gi|254780933|r 539 PTSVLVTGFDILFFWVARMMMMGLYFMKDAEGKGIEPFHIVYMHALVRDKNGQKMSKSKGNVVDPIDVIDQYGADALRFY 618 (947)
Q Consensus 539 P~d~~~~G~Di~r~W~~~~l~~~~~l~~~~~~~~~~Pfk~v~~hG~vld~~G~KMSKS~GNvidp~e~i~~yGaDalR~~ 618 (947)
T Consensus 520 PvD~~i~G~D~~r~w~~~~~~~~~~~~------~~~Pfk~l~~~G~vld~~G~KMSKSkGNvv~p~~~i~~yGaD~~Rl~ 593 (606)
T pfam00133 520 PADMLLEGSDQTRGWFYRMIVLGTALT------GSAPYKNVLVHGLVRDEQGRKMSKSLGNVIDPLDVIDKYGADALRLW 593 (606)
T ss_pred CCCEEECCHHHHHHHHHHHHHCCCCCC------CCCCCCEEEECCEEECCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHH
T ss_conf 984897767688489999997000027------99765458876618999887888888997898999987492999999
Q ss_pred HHCCCCCCCCCCCC
Q ss_conf 31233556775434
Q gi|254780933|r 619 FSIMAVQGRDINLD 632 (947)
Q Consensus 619 l~~~~~~~~D~~fs 632 (947)
T Consensus 594 ~~~-a~~~~D~~~S 606 (606)
T pfam00133 594 LAS-SDYGRDINFS 606 (606)
T ss_pred HHC-CCCHHCCCCC
T ss_conf 975-9922046559