RPSBLAST alignment for GI: 254780933 and conserved domain: cd00814
>gnl|CDD|173907 cd00814, MetRS_core, catalytic core domain of methioninyl-tRNA synthetases. Methionine tRNA synthetase (MetRS) catalytic core domain. This class I enzyme aminoacylates the 2'-OH of the nucleotide at the 3' of the appropriate tRNA. MetRS, which consists of the core domain and an anti-codon binding domain, functions as a monomer. However, in some species the anti-codon binding domain is followed by an EMAP domain. In this case, MetRS functions as a homodimer. The core domain is based on the Rossman fold and is responsible for the ATP-dependent formation of the enzyme bound aminoacyl-adenylate. It contains the characteristic class I HIGH and KMSKS motifs, which are involved in ATP binding. As a result of a deletion event, MetRS has a significantly shorter core domain insertion than IleRS, ValRS, and LeuR. Consequently, the MetRS insertion lacks the editing function. Length = 319
Score = 66.8 bits (164), Expect = 3e-11
Identities = 59/208 (28%), Positives = 86/208 (41%), Gaps = 72/208 (34%)
Query: 433 EWLEN-IQPWCISRQIW-WGHQIPVWYSPDGKLFVENTEDAALRSAIDYYLSQDNDMTVK 490
WL+ ++ I+R ++ WG IPV P ++V DA + Y+S
Sbjct: 173 SWLKEGLKDLSITRDLFDWG--IPVPLDPGKVIYV--WFDALIG-----YIS-------- 215
Query: 491 VRKMIKDGNISDLLKRDEDVLDTWFSSALWPFASLGWPEQTAELKTYYPTSVLVTGFDIL 550
N +E W+ GWPE V G DI+
Sbjct: 216 ---ATGYYN-------EEWGNSWWWKD--------GWPE-----------LVHFIGKDII 246
Query: 551 FF----WVARMMMMGLYFMKDAEGKGIE-PFHIV---YMHALVRDKNGQKMSKSKGNVVD 602
F W A M++G G+ P IV Y+ G+KMSKS+GNVVD
Sbjct: 247 RFHAIYWPA--MLLGA---------GLPLPTRIVAHGYLTV-----EGKKMSKSRGNVVD 290
Query: 603 PIDVIDQYGADALRFYFSIMAVQGRDIN 630
P D++++YGADALR+Y +G+D +
Sbjct: 291 PDDLLERYGADALRYYLLRERPEGKDSD 318