HHsearch alignment for GI: 254780934 and conserved domain: PRK13406
>PRK13406 bchD magnesium chelatase subunit D; Provisional.
Probab=99.29 E-value=8.7e-10 Score=76.88 Aligned_cols=168 Identities=17% Similarity=0.203 Sum_probs=122.8
Q ss_pred CCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECC-CCEEEEECCCCHHHHHHHHH
Q ss_conf 87249999657864511313531379999998876322100236656734899998268-50561020478689999986
Q gi|254780934|r 170 ARLDMMIVLDVSRSMESFFDSSITKIDMAIKSINAMLEEVKLIPDVNNVVQSGLVTFSN-KIEEFFLLEWGVSHLQRKIK 248 (374)
Q Consensus 170 ~~~di~~VlD~SgSM~~~~~~~~~ki~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~t~~~~~~~~~i~ 248 (374)
T Consensus 400 ~~~lviFvVDASGS~A~------~Rm~~aKGAV~~LL~dAY~-----~RD~ValIaFRG~~AevlLPPTrSv~~A~r~L~ 468 (584)
T PRK13406 400 SETTTIFVVDASGSAAL------HRLAEAKGAVELLLAECYV-----RRDHVALVAFRGRGAELLLPPTRSLVRAKRSLA 468 (584)
T ss_pred CCEEEEEEEECCCCHHH------HHHHHHHHHHHHHHHHHHH-----HHCEEEEEEECCCCCEEEECCCCCHHHHHHHHH
T ss_conf 66069999828862799------9999999999999999996-----004478998768763074188655999999996
Q ss_pred HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCC--------HHHHHHHHHHHHCCC
Q ss_conf 013368774442036767764322233331025788656427999806877888880--------689999999997898
Q gi|254780934|r 249 YLSKFGVSTNSTPGLKYAYNQIFDMQGMRQHCNTEDANYKKIIVFMTDGENLSTKED--------QQSLYYCNEAKKRGA 320 (374)
Q Consensus 249 ~l~~~g~~T~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~k~iillTDG~~~~~~~~--------~~~~~~~~~~k~~gi 320 (374)
T Consensus 469 ~LP~G-G~TPLA~GL~~A~~l~~~~r~---------~~~~p~~VllTDGRaNv~ldg~~~r~~a~~da~~~A~~l~~~g~ 538 (584)
T PRK13406 469 GLPGG-GGTPLAAGLDAALALALSVRR---------KGQTPTVVLLTDGRANIARDGAGGRAQAEEDALAAARALRAAGL 538 (584)
T ss_pred CCCCC-CCCHHHHHHHHHHHHHHHHHC---------CCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
T ss_conf 29999-988599999999999999755---------79954899982798777877788711489999999999997699
Q ss_pred EEEEEEECCCCCHHHHHHHC--CCCCEEEEC--CHHHHHHHHH
Q ss_conf 79999924822278899823--898179838--9899999999
Q gi|254780934|r 321 IVYAIGIRVIRSHEFLRACA--SPNSFYLVE--NPHSMYDAFS 359 (374)
Q Consensus 321 ~IytIg~~~~~~~~~L~~~A--s~~~~~~a~--~~~~L~~~f~ 359 (374)
T Consensus 539 ~~vVIDT~~-~~~~~a~~LA~~l~a~Y~~Lp~~~A~~l~~~V~ 580 (584)
T PRK13406 539 PALVIDTSP-RPQPQARALAEAMGARYLPLPRADATRLSQAVR 580 (584)
T ss_pred CEEEEECCC-CCCHHHHHHHHHCCCCEEECCCCCHHHHHHHHH
T ss_conf 789994898-886269999998399189789789899999999