HHsearch alignment for GI: 254780934 and conserved domain: cd01455

>cd01455 vWA_F11C1-5a_type Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A
Probab=98.30  E-value=0.00012  Score=46.23  Aligned_cols=175  Identities=12%  Similarity=0.164  Sum_probs=106.1

Q ss_pred             EEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCE------EEEECCCCHHHHH--H
Q ss_conf             9999657864511313531379999998876322100236656734899998268505------6102047868999--9
Q gi|254780934|r  174 MMIVLDVSRSMESFFDSSITKIDMAIKSINAMLEEVKLIPDVNNVVQSGLVTFSNKIE------EFFLLEWGVSHLQ--R  245 (374)
Q Consensus       174 i~~VlD~SgSM~~~~~~~~~ki~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~t~~~~~~~--~  245 (374)
T Consensus         3 lr~v~DvSgSM-YRFNg~DgRL~R~lEa~~MvMEaf~g~e---~k~~ydIvGHSGd~~~I~lV~~~~~Pk~~keRl~vl~   78 (191)
T cd01455           3 LKLVVDVSGSM-YRFNGYDGRLDRSLEAVVMVMEAFDGFE---DKIQYDIIGHSGDGPCVPFVKTNHPPKNNKERLETLK   78 (191)
T ss_pred             EEEEEECCCCE-EEECCCCHHHHHHHHHHHHHHHHHHCCC---CEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf             69999735442-3304753289999999999999861754---0057887502688775102348999986689999999


Q ss_pred             HHHHCCCC-CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHH-HHCCCEEE
Q ss_conf             98601336-87744420367677643222333310257886564279998068778888806899999999-97898799
Q gi|254780934|r  246 KIKYLSKF-GVSTNSTPGLKYAYNQIFDMQGMRQHCNTEDANYKKIIVFMTDGENLSTKEDQQSLYYCNEA-KKRGAIVY  323 (374)
Q Consensus       246 ~i~~l~~~-g~~T~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~k~iillTDG~~~~~~~~~~~~~~~~~~-k~~gi~Iy  323 (374)
T Consensus        79 ~M~AHsQyC~sGD~Tlea~~~Ai~~l~a~~d----------~De~fVivlSDANL~RYgI~--p~~l~~~l~~~p~V~a~  146 (191)
T cd01455          79 MMHAHSQFCWSGDHTVEATEFAIKELAAKED----------FDEAIVIVLSDANLERYGIQ--PKKLADALAREPNVNAF  146 (191)
T ss_pred             HHHHHHHHEECCCCHHHHHHHHHHHHHHCCC----------CCCCEEEEECCCCHHHCCCC--HHHHHHHHHCCCCCCEE
T ss_conf             8631201002588448999999998753026----------77608999814764431889--89999997338776689


Q ss_pred             EEEECCCCCH-HHHHHHCCCCCEEEECCHHHHHHHHHHHHHH
Q ss_conf             9992482227-8899823898179838989999999999984
Q gi|254780934|r  324 AIGIRVIRSH-EFLRACASPNSFYLVENPHSMYDAFSHIGKD  364 (374)
Q Consensus       324 tIg~~~~~~~-~~L~~~As~~~~~~a~~~~~L~~~f~~I~~~  364 (374)
T Consensus       147 ~IfIgslg~eA~~l~~~lP~G~~fVc~dt~~lP~il~qIfts  188 (191)
T cd01455         147 VIFIGSLSDEADQLQRELPAGKAFVCMDTSELPHIMQQIFTS  188 (191)
T ss_pred             EEEEECHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHH
T ss_conf             999735167999999748997417853653678999999887