HHsearch alignment for GI: 254780934 and conserved domain: pfam06707
>pfam06707 DUF1194 Protein of unknown function (DUF1194). This family consists of several hypothetical Rhizobiales specific proteins of around 270 residues in length. The function of this family is unknown.
Probab=98.02 E-value=0.00049 Score=42.62 Aligned_cols=180 Identities=14% Similarity=0.164 Sum_probs=106.3
Q ss_pred CEEEEEEECCCCCCCCCCCCCHHHHH--HHHHHHHH--HHHHHCCCCCCCCCEEEEEEEECCCCE--EEEECC--CCHHH
Q ss_conf 72499996578645113135313799--99998876--322100236656734899998268505--610204--78689
Q gi|254780934|r 171 RLDMMIVLDVSRSMESFFDSSITKID--MAIKSINA--MLEEVKLIPDVNNVVQSGLVTFSNKIE--EFFLLE--WGVSH 242 (374)
Q Consensus 171 ~~di~~VlD~SgSM~~~~~~~~~ki~--~~~~a~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~t--~~~~~ 242 (374)
T Consensus 3 dlaLvLavDvS~SVD~~----E~~lQr~G~A~Al~dp~V~~Ai~~--g~~g~Iava~~eWsg~~~q~~vv~Wt~I~~~~d 76 (206)
T pfam06707 3 DLALVLAVDVSGSVDEE----EYRLQREGYAAALRDPEVLDALLS--GPHGRIAVTYVEWSGPDDQRVVVPWTLIDSAED 76 (206)
T ss_pred HHHHHHHHHCCCCCCHH----HHHHHHHHHHHHHCCHHHHHHHHC--CCCCEEEEEEEEECCCCCCEEEECCEEECCHHH
T ss_conf 47786773323686999----999999999999759999999962--899718999998027887448869989589999
Q ss_pred HHHH---HHHCC-CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHC
Q ss_conf 9999---86013-3687744420367677643222333310257886564279998068778888806899999999978
Q gi|254780934|r 243 LQRK---IKYLS-KFGVSTNSTPGLKYAYNQIFDMQGMRQHCNTEDANYKKIIVFMTDGENLSTKEDQQSLYYCNEAKKR 318 (374)
Q Consensus 243 ~~~~---i~~l~-~~g~~T~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~k~iillTDG~~~~~~~~~~~~~~~~~~k~~ 318 (374)
T Consensus 77 a~a~A~~i~~~~r~~~~~Taig~Al~~a~~l~~~~~---------~~~~RrvIDiSGDG~nN~G~~p~~--~ard~~~~~ 145 (206)
T pfam06707 77 AEAFAARLAAAPRRAGRRTAIGGALGFAAALLAQNP---------YECLRRVIDVSGDGPNNQGFPPVT--AARDAAVAA 145 (206)
T ss_pred HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCC---------CCCCEEEEEEECCCCCCCCCCCHH--HHHHHHHHC
T ss_conf 999999997588788999769999999999998299---------876179999607998889998137--898767775
Q ss_pred CCEEEEEEECCCC------CHHHHHHHC--CCCCE-EEECCHHHHHHHH-HHHHHHHHE
Q ss_conf 9879999924822------278899823--89817-9838989999999-999984200
Q gi|254780934|r 319 GAIVYAIGIRVIR------SHEFLRACA--SPNSF-YLVENPHSMYDAF-SHIGKDIVT 367 (374)
Q Consensus 319 gi~IytIg~~~~~------~~~~L~~~A--s~~~~-~~a~~~~~L~~~f-~~I~~~i~~ 367 (374)
T Consensus 146 GitINgL~I~~~~~~~~~~L~~yy~~~VIgGpgAFV~~a~~~~df~~AirrKL~rEIag 204 (206)
T pfam06707 146 GVTINGLAIMGAEAPTSDDLDAYYRDCVIGGPGAFVEPANGFEDFAEAIRRKLVREIAG 204 (206)
T ss_pred CEEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHC
T ss_conf 92896677747898762369999973202389844997388799999999999998732