HHsearch alignment for GI: 254780934 and conserved domain: pfam07002
>pfam07002 Copine Copine. This family represents a conserved region approximately 180 residues long within eukaryotic copines. Copines are Ca(2+)-dependent phospholipid-binding proteins that are thought to be involved in membrane-trafficking, and may also be involved in cell division and growth.
Probab=92.02 E-value=0.79 Score=23.52 Aligned_cols=118 Identities=14% Similarity=0.189 Sum_probs=65.8
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCC------EEEEECCCCH------------HHHHHHHHHCCCC
Q ss_conf 137999999887632210023665673489999826850------5610204786------------8999998601336
Q gi|254780934|r 192 ITKIDMAIKSINAMLEEVKLIPDVNNVVQSGLVTFSNKI------EEFFLLEWGV------------SHLQRKIKYLSKF 253 (374)
Q Consensus 192 ~~ki~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~t~~~------------~~~~~~i~~l~~~ 253 (374)
T Consensus 10 ~N~Y~~AI~~vg~il~~YD~------Dk~~p~yGFGa~~~~~~~vsh~F~ln~~~~~p~~~G~~gvl~aY~~~~~~v~l~ 83 (145)
T pfam07002 10 PNPYEQAIRIVGEILQPYDS------DKRFPAFGFGARLPPDYEVSHDFPLNFNPENPECNGIEGVLNAYREALPNLQLS 83 (145)
T ss_pred CCHHHHHHHHHHHHHHHCCC------CCCEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCEEEEC
T ss_conf 88999999999999872689------881365435556699986330123568989997669999999999985810654
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEC
Q ss_conf 877444203676776432223333102578865642799980687788888068999999999789879999924
Q gi|254780934|r 254 GVSTNSTPGLKYAYNQIFDMQGMRQHCNTEDANYKKIIVFMTDGENLSTKEDQQSLYYCNEAKKRGAIVYAIGIR 328 (374)
Q Consensus 254 g~~T~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~k~iillTDG~~~~~~~~~~~~~~~~~~k~~gi~IytIg~~ 328 (374)
T Consensus 84 g-PT~fapiI~~a~~~a~~----~-----~~~~~Y~VLlIiTDG~i~---D~~~Ti~aIv~AS~~PlSIIiVGVG 145 (145)
T pfam07002 84 G-PTNFAPIIDAAARIAEA----T-----QKSGQYHVLLIITDGQVT---DMKATIDAIVRASHLPLSIIIVGVG 145 (145)
T ss_pred C-CCCHHHHHHHHHHHHHH----H-----CCCCEEEEEEEECCCCCC---CHHHHHHHHHHHHCCCEEEEEEEEC
T ss_conf 8-75279999999999997----2-----237718999996389735---6999999999982799279999519