HHsearch alignment for GI: 254780934 and conserved domain: pfam11775
>pfam11775 CobT_C Cobalamin biosynthesis protein CobT VWA domain. This family consists of several bacterial cobalamin biosynthesis (CobT) proteins. CobT is involved in the transformation of precorrin-3 into cobyrinic acid.
Probab=98.79 E-value=6.6e-07 Score=59.71 Aligned_cols=166 Identities=13% Similarity=0.147 Sum_probs=89.3
Q ss_pred CCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCC-----E---------EE--
Q ss_conf 8724999965786451131353137999999887632210023665673489999826850-----5---------61--
Q gi|254780934|r 170 ARLDMMIVLDVSRSMESFFDSSITKIDMAIKSINAMLEEVKLIPDVNNVVQSGLVTFSNKI-----E---------EF-- 233 (374)
Q Consensus 170 ~~~di~~VlD~SgSM~~~~~~~~~ki~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~---------~~-- 233 (374)
T Consensus 11 ~Dt~VtlLID~SGSMrgr------~i~~Aa~~adiL~~~Ler~gv-----~~EILGFtT~~wkGg~~r~~w~~~G~p~~p 79 (220)
T pfam11775 11 RDACVQLLIDLSGSMGGR------KIQLAAACADIIADALDRCGV-----KNEILGFTTFAWKGGPDREAMLAAGFPAFE 79 (220)
T ss_pred CCEEEEEEEECCCCCCCC------HHHHHHHHHHHHHHHHHHCCC-----CEEEEEECCCCCCCCCHHHHHHHCCCCCCC
T ss_conf 752899988688888988------678999999999999987699-----879985404765775029999875997672
Q ss_pred ---------EECCCCHH--HHHHHHHHCCCCC--CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCC-
Q ss_conf ---------02047868--9999986013368--774442036767764322233331025788656427999806877-
Q gi|254780934|r 234 ---------FLLEWGVS--HLQRKIKYLSKFG--VSTNSTPGLKYAYNQIFDMQGMRQHCNTEDANYKKIIVFMTDGEN- 299 (374)
Q Consensus 234 ---------~~~t~~~~--~~~~~i~~l~~~g--~~T~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~k~iillTDG~~- 299 (374)
T Consensus 80 gRlndl~hiiyk~ad~~wrrar~~lg~m~~~gllkENiDGEAL~wA~~RL~~R-----------~e~RkILmViSDGaP~ 148 (220)
T pfam11775 80 ALLLDIIHIINEKADAPEIRARKNLGCMCEEFLLKENIDGEALAQAAKLFAGR-----------MEDKKILLMISDGAPC 148 (220)
T ss_pred HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC-----------CCCCEEEEEECCCCCC
T ss_conf 36655664212446883077899987776631443189719999999998639-----------3124699997589967
Q ss_pred -------CCCCCCH-HHHHHHHHH-HHCCCEEEEEEECCCCCHHHHHHHCCCCCEEEECCHHHHHHHH-HHHHH
Q ss_conf -------8888806-899999999-9789879999924822278899823898179838989999999-99998
Q gi|254780934|r 300 -------LSTKEDQ-QSLYYCNEA-KKRGAIVYAIGIRVIRSHEFLRACASPNSFYLVENPHSMYDAF-SHIGK 363 (374)
Q Consensus 300 -------~~~~~~~-~~~~~~~~~-k~~gi~IytIg~~~~~~~~~L~~~As~~~~~~a~~~~~L~~~f-~~I~~ 363 (374)
T Consensus 149 ddst~s~n~~~yL~~hLr~vi~~ie~~~~iel~aIGIghDv~r~yY~~a------v~i~d~eeL~~~~~~~L~~ 216 (220)
T pfam11775 149 DDSTLSVAAGDGFEQHLRHIIEEIETLSEIDLIAIGIGHDAPRRYYKNA------ALINDAEELGGAITEELAE 216 (220)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHCC------EEECCHHHHHHHHHHHHHH
T ss_conf 7641125877767999999999985068826999874777686665065------6860388865999999999