HHsearch results for GI: 254780934 and protein with PDBid: 1mjn_A

>1mjn_A Integrin alpha-L; rossmann fold, immune system; 1.30A {Homo sapiens} SCOP: c.62.1.1 PDB: 3hi6_A 1mq8_B* 3eoa_I 3eob_I 1rd4_A* 1lfa_A 1zon_A 1zoo_A 1zop_A 1dgq_A 1xdd_A* 1xdg_A* 1xuo_A* 3e2m_A* 3bqn_B* 1cqp_A* 3bqm_B* 2ica_A* 2o7n_A* 3m6f_A* ...
Probab=99.72  E-value=6.1e-17  Score=118.19  Aligned_cols=170  Identities=19%  Similarity=0.252  Sum_probs=130.2

Q ss_pred             CCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCEEEEEC--CCCHHHHHHHH
Q ss_conf             8724999965786451131353137999999887632210023665673489999826850561020--47868999998
Q gi|254780934|r  170 ARLDMMIVLDVSRSMESFFDSSITKIDMAIKSINAMLEEVKLIPDVNNVVQSGLVTFSNKIEEFFLL--EWGVSHLQRKI  247 (374)
Q Consensus       170 ~~~di~~VlD~SgSM~~~~~~~~~ki~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--t~~~~~~~~~i  247 (374)
                      +++||+||+|.||||...      +++.+|+++..+++.+..     ...+++++.|.........+  ..++..+...+
T Consensus         1 g~~DivfllD~S~Sm~~~------~f~~~k~~~~~~i~~l~~-----~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i   69 (179)
T 1mjn_A            1 GNVDLVFLFDGSMSLQPD------EFQKILDFMKDVMKKCSN-----TSYQFAAVQFSTSYKTEFDFSDYVKRKDPDALL   69 (179)
T ss_dssp             CCEEEEEEEECBTTCCHH------HHHHHHHHHHHHHHHTTT-----SSEEEEEEEESSSEEEEECHHHHHHHCCHHHHH
T ss_pred             CCEEEEEEEECCCCCCHH------HHHHHHHHHHHHHHHHCC-----CCCEEEEEEEEECCEECCCCCCCCCHHHHHHHH
T ss_conf             976999999688999879------999999999999997375-----776699999860211113521204699999987


Q ss_pred             HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEE
Q ss_conf             60133687744420367677643222333310257886564279998068778888806899999999978987999992
Q gi|254780934|r  248 KYLSKFGVSTNSTPGLKYAYNQIFDMQGMRQHCNTEDANYKKIIVFMTDGENLSTKEDQQSLYYCNEAKKRGAIVYAIGI  327 (374)
Q Consensus       248 ~~l~~~g~~T~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~k~iillTDG~~~~~~~~~~~~~~~~~~k~~gi~IytIg~  327 (374)
                      +.+...+++|+++.++.++...+......      ..++.+|++||+|||+++.+...         .+..++.++.+++
T Consensus        70 ~~~~~~~g~~~~~~al~~a~~~~~~~~~~------~r~~~~k~ivllTDG~~~~~~~~---------~~~~~~~~~~~~i  134 (179)
T 1mjn_A           70 KHVKHMLLLTNTFGAINYVATEVFREELG------ARPDATKVLIIITDGEATDSGNI---------DAAKDIIRYIIGI  134 (179)
T ss_dssp             TTCCCCCBCCCHHHHHHHHHHHTSSGGGT------CCTTSEEEEEEEESSCCSSCSCC---------GGGTTSEEEEEEE
T ss_pred             HHCCCCCCCCHHHHHHHHHHHHHHHHHHC------CCCCCCEEEEEECCCCCCCCHHH---------HHHHCCEEEEEEE
T ss_conf             51255789832788999999998545306------89987148999807998860689---------9982986889999


Q ss_pred             CCC----CCHHHHHHHCCC---CCEEEECCHHHHHHHHHHHHHHH
Q ss_conf             482----227889982389---81798389899999999999842
Q gi|254780934|r  328 RVI----RSHEFLRACASP---NSFYLVENPHSMYDAFSHIGKDI  365 (374)
Q Consensus       328 ~~~----~~~~~L~~~As~---~~~~~a~~~~~L~~~f~~I~~~i  365 (374)
                      +..    .+.+.|+.+|+.   .++|.+++.++|.+.+++|.++|
T Consensus       135 ~~~~~~~~~~~~L~~ias~~~~~~~~~~~~~~~L~~~~~~l~~~I  179 (179)
T 1mjn_A          135 GKHFQTKESQETLHKFASKPASEFVKILDTFEKLKDLCTELQKKI  179 (179)
T ss_dssp             SGGGCSHHHHHTTGGGSCSCHHHHEEEESSGGGSCCHHHHHHHHC
T ss_pred             EECCCCCCCHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHC
T ss_conf             946886017999999857998633998799999999999997249