HHsearch results for GI: 254780934 and protein with PDBid: 1n3y_A
>1n3y_A Integrin alpha-X; alpha/beta rossmann fold, cell adhesion; 1.65A {Homo sapiens} SCOP: c.62.1.1
Probab=99.86 E-value=4.5e-21 Score=142.79 Aligned_cols=183 Identities=20% Similarity=0.271 Sum_probs=142.8
Q ss_pred CCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCEEEEECCC--CHHHHH
Q ss_conf 377872499996578645113135313799999988763221002366567348999982685056102047--868999
Q gi|254780934|r 167 QTDARLDMMIVLDVSRSMESFFDSSITKIDMAIKSINAMLEEVKLIPDVNNVVQSGLVTFSNKIEEFFLLEW--GVSHLQ 244 (374)
Q Consensus 167 ~~~~~~di~~VlD~SgSM~~~~~~~~~ki~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~--~~~~~~ 244 (374)
..+.+.||+||+|.|+||... .++.+|+++..+++.+. ....|++++.|+..+....+++. +...+.
T Consensus 5 ~~~~~~DivfvlD~S~Sm~~~------~~~~~k~~i~~li~~l~-----~~~~rv~vv~f~~~~~~~~~l~~~~~~~~~~ 73 (198)
T 1n3y_A 5 ASRQEQDIVFLIDGSGSISSR------NFATMMNFVRAVISQFQ-----RPSTQFSLMQFSNKFQTHFTFEEFRRSSNPL 73 (198)
T ss_dssp ---CCEEEEEEEECCTTSCHH------HHHHHHHHHHHHHTTSC-----TTTEEEEEEEESSSEEEEECHHHHHHCSSGG
T ss_pred CCCCCCCEEEEEECCCCCCHH------HHHHHHHHHHHHHHHHC-----CCCCEEEEEEEECCEEEECCCCCCCCHHHHH
T ss_conf 668886489999687998879------99999999999999708-----9985899999834323412666643389999
Q ss_pred HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCEEEE
Q ss_conf 99860133687744420367677643222333310257886564279998068778888806899999999978987999
Q gi|254780934|r 245 RKIKYLSKFGVSTNSTPGLKYAYNQIFDMQGMRQHCNTEDANYKKIIVFMTDGENLSTKEDQQSLYYCNEAKKRGAIVYA 324 (374)
Q Consensus 245 ~~i~~l~~~g~~T~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~k~iillTDG~~~~~~~~~~~~~~~~~~k~~gi~Iyt 324 (374)
..++.+...+++|+++.++.++.+.+..... ...++.+|++||+|||..+... ......++.+|+.||.||+
T Consensus 74 ~~i~~~~~~~~~t~~~~al~~a~~~~~~~~~------~~r~~~~kvivlltDG~~~~~~--~~~~~~~~~~~~~gv~i~~ 145 (198)
T 1n3y_A 74 SLLASVHQLQGFTYTATAIQNVVHRLFHASY------GARRDAAKILIVITDGKKEGDS--LDYKDVIPMADAAGIIRYA 145 (198)
T ss_dssp GGGTTCCCCCSCBCHHHHHHHHHTTTTSGGG------TCCTTSEEEEEEEESSCCBSCS--SCHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHC------CCCCCCCCEEEEEECCCCCCCC--CCHHHHHHHHHHCCCEEEE
T ss_conf 9887654036987388999999999842320------5778764259999358988872--0599999999978988999
Q ss_pred EEECCC----CCHHHHHHHCCC---CCEEEECCHHHHHHHHHHHHHHHHEE
Q ss_conf 992482----227889982389---81798389899999999999842001
Q gi|254780934|r 325 IGIRVI----RSHEFLRACASP---NSFYLVENPHSMYDAFSHIGKDIVTK 368 (374)
Q Consensus 325 Ig~~~~----~~~~~L~~~As~---~~~~~a~~~~~L~~~f~~I~~~i~~~ 368 (374)
||++.. .+.+.|+.+|+. .++|.+++.++|.+++++|.+.||..
T Consensus 146 Ig~g~~~~~~~~~~~L~~ias~~~~~~~~~~~~~~~L~~i~~~l~~~ic~~ 196 (198)
T 1n3y_A 146 IGVGLAFQNRNSWKELNDIASKPSQEHIFKVEDFDALKDIQNQLKEKIFAI 196 (198)
T ss_dssp EEESGGGGSSTTHHHHHHHSCSSSGGGEEEESSGGGGGGGHHHHHHHHHTC
T ss_pred EEECCCCCCCCCHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHCCC
T ss_conf 997876677534999999866998651999299999999999999873167