HHsearch results for GI: 254780934 and protein with PDBid: 1rrk_A
>1rrk_A Complement factor B; BB, hydrolase; 2.00A {Homo sapiens} SCOP: b.47.1.2 c.62.1.1 PDB: 1rs0_A* 1rtk_A* 2win_I* 1dle_A
Probab=99.91 E-value=5.4e-23 Score=154.24 Aligned_cols=184 Identities=17% Similarity=0.215 Sum_probs=142.6
Q ss_pred CEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCEEEEECC----CCHHHHHHH
Q ss_conf 7249999657864511313531379999998876322100236656734899998268505610204----786899999
Q gi|254780934|r 171 RLDMMIVLDVSRSMESFFDSSITKIDMAIKSINAMLEEVKLIPDVNNVVQSGLVTFSNKIEEFFLLE----WGVSHLQRK 246 (374)
Q Consensus 171 ~~di~~VlD~SgSM~~~~~~~~~ki~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t----~~~~~~~~~ 246 (374)
.+||+||||.||||+. .+++.+|+++..+++.+... ....|++++.|++.+....+++ .++..++..
T Consensus 1 ~lDivfvlD~S~Sm~~------~~~~~~k~~~~~~i~~~~~~---~~~~rv~lv~f~~~~~~~~~l~~~~~~~~~~~~~~ 71 (497)
T 1rrk_A 1 SMNIYLVLDGSDSIGA------SNFTGAKKVLVNLIEKVASY---GVKPRYGLVTYATYPKIWVKVSEADSSNADWVTKQ 71 (497)
T ss_dssp CEEEEEEEECSTTTCH------HHHHHHHHHHHHHHHHHHHT---TCCCEEEEEEESSSEEEEECTTSGGGGCHHHHHHH
T ss_pred CCCEEEEEECCCCCCH------HHHHHHHHHHHHHHHHCCCC---CCCEEEEEEEECCEEEEEECCCCCCCCCHHHHHHH
T ss_conf 9458999957799986------99999999999999853658---99609999998781789973798775689999999
Q ss_pred HHHCCC----CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHH---------
Q ss_conf 860133----6877444203676776432223333102578865642799980687788888068999999---------
Q gi|254780934|r 247 IKYLSK----FGVSTNSTPGLKYAYNQIFDMQGMRQHCNTEDANYKKIIVFMTDGENLSTKEDQQSLYYCN--------- 313 (374)
Q Consensus 247 i~~l~~----~g~~T~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~k~iillTDG~~~~~~~~~~~~~~~~--------- 313 (374)
|+.|.. .+++|++..++..+.+.+...... ......+.+|++||||||.+|.+.++........
T Consensus 72 i~~i~~~~~~~~g~T~~~~al~~a~~~~~~~~~~---~~~~~~~~~~viillTDG~~n~~~~p~~~~~~i~~~~~~~~~~ 148 (497)
T 1rrk_A 72 LNEINYEDHKLKSGTNTKKALQAVYSMMSWPDDV---PPEGWNRTRHVIILMTDGLHNMGGDPITVIDEIRDLLYIGKDR 148 (497)
T ss_dssp HHHCCGGGSCCTTCCCHHHHHHHHHHHHCCC---------CGGGCEEEEEEEECSCCCSSSCTHHHHHHHHHHTTCSSCC
T ss_pred HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC---CCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 9608566886888757999999999998652014---7555567875999997976777898789999999878777777
Q ss_pred -HHHHCCCEEEEEEECCCCCHHHHHHHCC--CC--CEEEECCHHHHHHHHHHHHHHHH
Q ss_conf -9997898799999248222788998238--98--17983898999999999998420
Q gi|254780934|r 314 -EAKKRGAIVYAIGIRVIRSHEFLRACAS--PN--SFYLVENPHSMYDAFSHIGKDIV 366 (374)
Q Consensus 314 -~~k~~gi~IytIg~~~~~~~~~L~~~As--~~--~~~~a~~~~~L~~~f~~I~~~i~ 366 (374)
.+++.||.||+||+|.+.+.+.|+.+|+ ++ +||.+++.++|.++|.++..+-.
T Consensus 149 ~~~~~~gi~i~~vgiG~~~d~~~L~~iAs~~~~~~~~f~~~d~~~L~~~~~~~~~~~~ 206 (497)
T 1rrk_A 149 KNPREDYLDVYVFGVGPLVNQVNINALASKKDNEQHVCKVKDMECLEDVFYQMIDESQ 206 (497)
T ss_dssp -CCCGGGEEEEEEECSSSCCHHHHHHHSCCCTTCCCEEETTCHHHHHHHHHHHSCGGG
T ss_pred HHHHHCCEEEEEEECCCCCCHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHCCCCCC
T ss_conf 6687679079997368867999999875178985049994999999998753024660