HHsearch results for GI: 254780934 and protein with PDBid: 2b2x_A
>2b2x_A Integrin alpha-1; computational design, antibody-antigen complex, immune system; 2.20A {Rattus norvegicus} SCOP: c.62.1.1
Probab=99.87 E-value=5.7e-21 Score=142.16 Aligned_cols=182 Identities=20% Similarity=0.293 Sum_probs=143.1
Q ss_pred CCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCEEEEECCC--CHHHHHHH
Q ss_conf 7872499996578645113135313799999988763221002366567348999982685056102047--86899999
Q gi|254780934|r 169 DARLDMMIVLDVSRSMESFFDSSITKIDMAIKSINAMLEEVKLIPDVNNVVQSGLVTFSNKIEEFFLLEW--GVSHLQRK 246 (374)
Q Consensus 169 ~~~~di~~VlD~SgSM~~~~~~~~~ki~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~--~~~~~~~~ 246 (374)
..++|++|++|.|+||.. ++..|+.+..++..+.. .....|++++.|+..+....+++. ++..+...
T Consensus 20 ~~~~DivfvlD~S~sv~~--------~~~~k~fv~~li~~~~i---~~~~~rv~lv~fs~~~~~~~~l~~~~~~~~~~~~ 88 (223)
T 2b2x_A 20 STQLDIVIVLDGSNSIYP--------WESVIAFLNDLLKRMDI---GPKQTQVGIVQYGENVTHEFNLNKYSSTEEVLVA 88 (223)
T ss_dssp --CEEEEEEEECSTTCCC--------HHHHHHHHHHHHTTSCC---STTSCCEEEEEESSSEEEEECTTTCCSHHHHHHH
T ss_pred CCCEEEEEEEECCCCCCC--------HHHHHHHHHHHHHHCCC---CCCCCEEEEEEEECCEEEECCCCCCCCHHHHHHH
T ss_conf 986569999979887436--------99999999999997155---8886089899860426786054555768999999
Q ss_pred HHHCCCCC-CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCEEEEE
Q ss_conf 86013368-77444203676776432223333102578865642799980687788888068999999999789879999
Q gi|254780934|r 247 IKYLSKFG-VSTNSTPGLKYAYNQIFDMQGMRQHCNTEDANYKKIIVFMTDGENLSTKEDQQSLYYCNEAKKRGAIVYAI 325 (374)
Q Consensus 247 i~~l~~~g-~~T~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~k~iillTDG~~~~~~~~~~~~~~~~~~k~~gi~IytI 325 (374)
++.+...| ++|+++.++.++.+.+...... ..++.+|++||+|||..+. .......+..+|+.||+||+|
T Consensus 89 i~~i~~~~~~~t~~~~aL~~~~~~~~~~~~g------~R~~~~kvlillTDG~~~d---~~~~~~~a~~lk~~gi~v~~I 159 (223)
T 2b2x_A 89 ANKIVQRGGRQTMTALGIDTARKEAFTEARG------ARRGVKKVMVIVTDGESHD---NYRLKQVIQDCEDENIQRFSI 159 (223)
T ss_dssp HTTCCCCCCSSCCHHHHHHHHHHTTSSGGGT------CCTTSEEEEEEEESSCCTT---GGGHHHHHHHHHTTTEEEEEE
T ss_pred HHHHHCCCCCCCCHHHHHHHHHHHHCCCCCC------CCCCCCEEEEEEECCCCCC---CHHHHHHHHHHHHCCCEEEEE
T ss_conf 8743124773322177788888875033358------8878725799982698788---312999999998759989999
Q ss_pred EECCCCCH---------HHHHHHCCC---CCEEEECCHHHHHHHHHHHHHHHHEEEE
Q ss_conf 92482227---------889982389---8179838989999999999984200166
Q gi|254780934|r 326 GIRVIRSH---------EFLRACASP---NSFYLVENPHSMYDAFSHIGKDIVTKRI 370 (374)
Q Consensus 326 g~~~~~~~---------~~L~~~As~---~~~~~a~~~~~L~~~f~~I~~~i~~~~~ 370 (374)
|+|...+. +.|+.+||. .++|.+++.++|.+++++|.+.|+....
T Consensus 160 gvg~~~~~~~~~~~~~~~eL~~IAs~p~~~~~f~~~d~~~L~~i~~~l~~~ic~~e~ 216 (223)
T 2b2x_A 160 AILGHYNRGNLSTEKFVEEIKSIASEPTEKHFFNVSDELALVTIVKALGERIFALEA 216 (223)
T ss_dssp EECGGGC---CCCHHHHHHHHTTSCSSGGGTEEEESSTTGGGGGHHHHHTTTC----
T ss_pred EEECCCCCCCCCCCCCHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCC
T ss_conf 984666644324423699999986699855189818999999999999988643103