HHsearch results for GI: 254780934 and protein with PDBid: 3eh1_A
>3eh1_A Protein transport protein SEC24B; copii coat protein, vesicle transport, transport signal sequence, cytoplasm, endoplasmic reticulum; 1.80A {Homo sapiens} PDB: 2nut_B 2nup_B 3egd_B 3egx_B
Probab=97.02 E-value=0.014 Score=32.75 Aligned_cols=175 Identities=12% Similarity=0.099 Sum_probs=106.2
Q ss_pred CCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCEE-----------------
Q ss_conf 872499996578645113135313799999988763221002366567348999982685056-----------------
Q gi|254780934|r 170 ARLDMMIVLDVSRSMESFFDSSITKIDMAIKSINAMLEEVKLIPDVNNVVQSGLVTFSNKIEE----------------- 232 (374)
Q Consensus 170 ~~~di~~VlD~SgSM~~~~~~~~~ki~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------- 232 (374)
.+--++||+|.|.+.... ..++.+++++...++.+.. ....+++++.|+..+..
T Consensus 159 ~pp~~vfvID~S~~a~~~-----g~l~~~~~ai~~~l~~l~~----~~~~~VglItf~~~V~~~~~~~~~~~~~~~v~~d 229 (751)
T 3eh1_A 159 QPAVYLFVLDVSHNAVEA-----GYLTILCQSLLENLDKLPG----DSRTRIGFMTFDSTIHFYNLQEGLSQPQMLIVSD 229 (751)
T ss_dssp CCCEEEEEEECSHHHHHH-----THHHHHHHHHHHHTTTSSC----CTTCEEEEEEESSSEEEEECCTTCSSCEEEEESC
T ss_pred CCCEEEEEEECCHHHHHH-----HHHHHHHHHHHHHHHHCCC----CCCEEEEEEEECCEEEEEECCCCCCCCEEEEECC
T ss_conf 986899999896578661-----4999999999999974778----8760899999899789984689866532674148
Q ss_pred ------------EEECCCCHHHHHHHHHHCCCC-----CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEE
Q ss_conf ------------102047868999998601336-----877444203676776432223333102578865642799980
Q gi|254780934|r 233 ------------FFLLEWGVSHLQRKIKYLSKF-----GVSTNSTPGLKYAYNQIFDMQGMRQHCNTEDANYKKIIVFMT 295 (374)
Q Consensus 233 ------------~~~~t~~~~~~~~~i~~l~~~-----g~~T~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~k~iillT 295 (374)
..++...+..+...++.|... ..++..+.++..+...+... --.+++++
T Consensus 230 ~~~~~~p~~~~~l~~l~e~~~~i~~~L~~L~~~~~~~~~~~~~lg~Al~~a~~~l~~~--------------gG~i~~f~ 295 (751)
T 3eh1_A 230 IDDVFLPTPDSLLVNLYESKELIKDLLNALPNMFTNTRETHSALGPALQAAFKLMSPT--------------GGRVSVFQ 295 (751)
T ss_dssp TTCTTSCCGGGTSEETTTTHHHHHHHHHHGGGTSTTCSCCCCCHHHHHHHHHHHHTTT--------------CEEEEEEE
T ss_pred CCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHC--------------CCEEEEEE
T ss_conf 6312467876468437998999999998545541488776410899999999988732--------------97599995
Q ss_pred CCCCCCCC-----------------------CCHHHHHHHHHHHHCCCEEEEEEECCC-CCHHHHHHHC--CCCCEEEEC
Q ss_conf 68778888-----------------------806899999999978987999992482-2278899823--898179838
Q gi|254780934|r 296 DGENLSTK-----------------------EDQQSLYYCNEAKKRGAIVYAIGIRVI-RSHEFLRACA--SPNSFYLVE 349 (374)
Q Consensus 296 DG~~~~~~-----------------------~~~~~~~~~~~~k~~gi~IytIg~~~~-~~~~~L~~~A--s~~~~~~a~ 349 (374)
+|.++.|. ...-...++..+.+.||.|.-+.+..+ .+-..|..++ |+|..|.-+
T Consensus 296 ~g~pt~GpG~l~~~~~~~~~~~~~~~~~~~~~~~fY~~la~~~~~~~isvdif~~s~~~~~l~~l~~l~~~TGG~v~~~~ 375 (751)
T 3eh1_A 296 TQLPSLGAGLLQSREDPNQRSSTKVVQHLGPATDFYKKLALDCSGQQTAVDLFLLSSQYSDLASLACMSKYSAGCIYYYP 375 (751)
T ss_dssp CSCCCSSTTCCCCCCCSCGGGGSSSCTTCSCSCSHHHHHHHHHHHTTEEEEEEECCSSCCCHHHHTHHHHTTTCCEEECT
T ss_pred CCCCCCCCCCEECCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHCCCCEEEEEC
T ss_conf 67997889832126676667854567651405789999999999769479999945877787998889864786599936
Q ss_pred C------HHHHHHHHHHHHHHHHE
Q ss_conf 9------89999999999984200
Q gi|254780934|r 350 N------PHSMYDAFSHIGKDIVT 367 (374)
Q Consensus 350 ~------~~~L~~~f~~I~~~i~~ 367 (374)
+ ..++...++++.+.++.
T Consensus 376 ~f~~~~~~~~~~~l~~dl~~~l~~ 399 (751)
T 3eh1_A 376 SFHYTHNPSQAEKLQKDLKRYLTR 399 (751)
T ss_dssp TCBTTTBHHHHHHHHHHHHHHHHS
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 866433657899999999987554