HHsearch results for GI: 254780934 and protein with PDBid: 3eh2_A
>3eh2_A Protein transport protein SEC24C; copii-coat protein, vesicle transport, cytoplasm, endoplasmic reticulum, ER-golgi transport, golgi apparatus; 2.35A {Homo sapiens}
Probab=95.82 E-value=0.075 Score=28.33 Aligned_cols=181 Identities=11% Similarity=0.105 Sum_probs=101.2
Q ss_pred CCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC-CCCCCCEEEEEEEECCCCEE---------------
Q ss_conf 78724999965786451131353137999999887632210023-66567348999982685056---------------
Q gi|254780934|r 169 DARLDMMIVLDVSRSMESFFDSSITKIDMAIKSINAMLEEVKLI-PDVNNVVQSGLVTFSNKIEE--------------- 232 (374)
Q Consensus 169 ~~~~di~~VlD~SgSM~~~~~~~~~ki~~~~~a~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--------------- 232 (374)
..+.-++||+|.|...-.. .-.+.+++++...++.+... .......++|++.|+..+..
T Consensus 171 ~~pp~~vfvID~S~~a~~~-----g~~~~~~~~i~~~l~~lp~~~~~~~~~~~vglitf~~~v~~~~~~~~~~~~~~~v~ 245 (766)
T 3eh2_A 171 PSPPAFIFMIDVSYNAIRT-----GLVRLLCEELKSLLDFLPREGGAEESAIRVGFVTYNKVLHFYNVKSSLAQPQMMVV 245 (766)
T ss_dssp CCCCEEEEEEECSHHHHHT-----THHHHHHHHHHHHGGGCCCCSSCSSCCCEEEEEEESSSEEEEECCTTCSSCEEEEE
T ss_pred CCCCEEEEEEECCHHHHHH-----HHHHHHHHHHHHHHHHCHHHHCCCCCCEEEEEEEECCEEEECCCCCCCCCCEEEEC
T ss_conf 9987899999887477665-----48999999999999846122224775248999973877998446786433347640
Q ss_pred --------------EEECCCCHHHHHHHHHHCCC-----CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEE
Q ss_conf --------------10204786899999860133-----68774442036767764322233331025788656427999
Q gi|254780934|r 233 --------------FFLLEWGVSHLQRKIKYLSK-----FGVSTNSTPGLKYAYNQIFDMQGMRQHCNTEDANYKKIIVF 293 (374)
Q Consensus 233 --------------~~~~t~~~~~~~~~i~~l~~-----~g~~T~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~k~iil 293 (374)
..++...+..+.+.++.+.. ....+..+.++..+...+... ...-+++++
T Consensus 246 ~d~~d~~~p~~~~~l~~~~e~~~~i~~lL~~l~~~~~~~~~~~~~~g~Al~~a~~~l~~~-----------~~gG~ii~f 314 (766)
T 3eh2_A 246 SDVADMFVPLLDGFLVNVNESRAVITSLLDQIPEMFADTRETETVFVPVIQAGMEALKAA-----------ECAGKLFLF 314 (766)
T ss_dssp CCTTTCCCCCCTTSSBCTTTTHHHHHHHHHHHHHHHTTCCCCCCCSHHHHHHHHHHHHHT-----------TCCEEEEEE
T ss_pred CCCCCCCCCCCCCCEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCC-----------CCCCCEEEE
T ss_conf 573113555665502155888999999987364334688788754799999999997055-----------779848999
Q ss_pred EECCCCCCCC-----------------------CCHHHHHHHHHHHHCCCEEEEEEECCC-CCHHHHHHHC--CCCCEEE
Q ss_conf 8068778888-----------------------806899999999978987999992482-2278899823--8981798
Q gi|254780934|r 294 MTDGENLSTK-----------------------EDQQSLYYCNEAKKRGAIVYAIGIRVI-RSHEFLRACA--SPNSFYL 347 (374)
Q Consensus 294 lTDG~~~~~~-----------------------~~~~~~~~~~~~k~~gi~IytIg~~~~-~~~~~L~~~A--s~~~~~~ 347 (374)
.+.|..+.+. ...-...++..+...||.|..+.+..+ .+-..|..++ |+|..|.
T Consensus 315 ~~s~P~t~GpG~l~~~~~~~~~~~~~e~~~~~~~~~fY~~la~~~~~~~isvdlf~~s~~~~dl~~l~~l~~~TGG~v~~ 394 (766)
T 3eh2_A 315 HTSLPIAEAPGKLKNRDDRKLINTDKEKTLFQPQTGAYQTLAKECVAQGCCVDLFLFPNQYVDVATLSVVPQLTGGSVYK 394 (766)
T ss_dssp ECSCCCSSSTTCCCCCCCGGGTTSTTGGGGTSCSSTHHHHHHHHHHHHTEEEEEEECCSSCCCHHHHTHHHHHTTCCEEE
T ss_pred ECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHCCCEEEE
T ss_conf 51688778997420443223457620133305625899999999998695799999548765879999998744955999
Q ss_pred ECCH--HH-HHHHHHHHHHHH
Q ss_conf 3898--99-999999999842
Q gi|254780934|r 348 VENP--HS-MYDAFSHIGKDI 365 (374)
Q Consensus 348 a~~~--~~-L~~~f~~I~~~i 365 (374)
.++. .. ......++.+.+
T Consensus 395 ~~~f~~~~~~~~l~~~l~~~~ 415 (766)
T 3eh2_A 395 YASFQVENDQERFLSDLRRDV 415 (766)
T ss_dssp CTTCCHHHHHHHHHHHHHHHH
T ss_pred ECCCCCCCHHHHHHHHHHHHH
T ss_conf 689764222789999999975