HHsearch results for GI: 254780934 and protein with PDBid: 3k6s_A
>3k6s_A Integrin alpha-X; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_A* 3k72_A*
Probab=99.59 E-value=2.1e-15 Score=109.07 Aligned_cols=183 Identities=20% Similarity=0.258 Sum_probs=134.6
Q ss_pred CCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCEEEEECCC--CHHHHHHH
Q ss_conf 7872499996578645113135313799999988763221002366567348999982685056102047--86899999
Q gi|254780934|r 169 DARLDMMIVLDVSRSMESFFDSSITKIDMAIKSINAMLEEVKLIPDVNNVVQSGLVTFSNKIEEFFLLEW--GVSHLQRK 246 (374)
Q Consensus 169 ~~~~di~~VlD~SgSM~~~~~~~~~ki~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~--~~~~~~~~ 246 (374)
...+||+||||.|+|++.. -.+.+++.++.++..+.. ...+++++.|+........+.. ........
T Consensus 128 ~~~~DivfvlDgS~Si~~~------df~~~k~f~~~v~~~f~~-----~~~qvg~vqys~~~~~~f~l~d~~~~~~~~~~ 196 (1095)
T 3k6s_A 128 RQEQDIVFLIDGSGSISSR------NFATMMNFVRAVISQFQR-----PSTQFSLMQFSNKFQTHFTFEEFRRSSNPLSL 196 (1095)
T ss_dssp CCCEEEEEEEECCTTSCSH------HHHHHHHHHHHHHHSSCS-----SSEEEEEEEESSSEEEEECSHHHHSCSCGGGG
T ss_pred CCCCCEEEEEECCCCCCCC------CHHHHHHHHHHHHHHCCC-----CCEEEEEEEECCCEEEEEEHHHCCCCCCHHHH
T ss_conf 6674379999089872743------068999999999862466-----75499999613732588870343333026787
Q ss_pred HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCEEEEEE
Q ss_conf 86013368774442036767764322233331025788656427999806877888880689999999997898799999
Q gi|254780934|r 247 IKYLSKFGVSTNSTPGLKYAYNQIFDMQGMRQHCNTEDANYKKIIVFMTDGENLSTKEDQQSLYYCNEAKKRGAIVYAIG 326 (374)
Q Consensus 247 i~~l~~~g~~T~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~k~iillTDG~~~~~~~~~~~~~~~~~~k~~gi~IytIg 326 (374)
++.+...++.|++..|+..+...+..... ...++..|++|++|||+-+.. ..........++..||.+|+||
T Consensus 197 v~~i~~~~g~T~Ta~ai~~~~~~~f~~~~------g~r~~a~kv~IviTDG~s~~d--~~~l~~~i~~~~~~gI~~~aIG 268 (1095)
T 3k6s_A 197 LASVHQLQGFTYTATAIQNVVHRLFHASY------GARRDAAKILIVITDGKKEGD--SLDYKDVIPMADAAGIIRYAIG 268 (1095)
T ss_dssp TTTCCCCCSCBCHHHHHHHHHTTTTSTTT------TCCSSSEEEEEEEESSCCBSC--SSCHHHHHHHHHHHCEEECCEE
T ss_pred HHHEEECCCCCCHHHHHHHHHHHHHHHHH------CCCCCCCEEEEEEECCCCCCC--CCCHHHHHHHHHHCCCEEEEEE
T ss_conf 54146136743078889999997631642------688898417999926864567--3203444445864892899997
Q ss_pred ECCC----CCHHHHHHHCCC---CCEEEECCHHHHHHHHHHHHHHHHEEEE
Q ss_conf 2482----227889982389---8179838989999999999984200166
Q gi|254780934|r 327 IRVI----RSHEFLRACASP---NSFYLVENPHSMYDAFSHIGKDIVTKRI 370 (374)
Q Consensus 327 ~~~~----~~~~~L~~~As~---~~~~~a~~~~~L~~~f~~I~~~i~~~~~ 370 (374)
++.. .....|+.+|+. .++|.+++..+|.++.+.+.+.|...+.
T Consensus 269 vg~~~~~~~~~~eL~~iAs~p~~~~~f~v~~~~aL~~i~~~L~~~i~~ieg 319 (1095)
T 3k6s_A 269 VGLAFQNRNSWKELNDIASKPSQEHIFKVEDFDALKDIQNQLKEKIFAIEG 319 (1095)
T ss_dssp BSSGGGSTTSSHHHHTTSCSSTTTSCCCBSCSGGGGSSTTTHHHHHHTCCC
T ss_pred CCCCCCCCCCHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHCCCCEEEEC
T ss_conf 254325643353542120588740389935557766777764165256454