RPSBLAST alignment of GI: 254780934 and protein with PDBid: 1pt6
>1pt6_A Integrin alpha-1; X-RAY diffraction, cell adhesion; 1.87A {Homo sapiens} SCOP: c.62.1.1 PDB: 1qcy_A 1qc5_A 1qc5_B 1ck4_A 1mhp_A Length = 213
Score = 55.2 bits (132), Expect = 2e-08
Identities = 43/216 (19%), Positives = 85/216 (39%), Gaps = 37/216 (17%)
Query: 166 SQTDARLDMMIVLDVSRSMESFFDSSITKIDMAIKSINAMLEEVKLIPDVNNVVQSGLVT 225
S+ +LD++IVLD S S+ + D +N +L+ + + P Q G+V
Sbjct: 2 SECSTQLDIVIVLDGSNSIYPW--------DSVTAFLNDLLKRMDIGPK---QTQVGIVQ 50
Query: 226 FSNKIEEFFLL---EWGVSHLQRKIKYLSKFGVSTNSTPGLKYAYNQIFDM-QGMRQHCN 281
+ + F L L K + + G T + G A + F +G R+
Sbjct: 51 YGENVTHEFNLNKYSSTEEVLVAAKKIVQRGGRQTMTALGTDTARKEAFTEARGARR--- 107
Query: 282 TEDANYKKIIVFMTDGENLSTKEDQQSLYYCNEAKKRGAIVYAIGI---------RVIRS 332
KK++V +TDGE+ ++ + + + ++I I +
Sbjct: 108 ----GVKKVMVIVTDGES---HDNHRLKKVIQDCEDENIQRFSIAILGSYNRGNLSTEKF 160
Query: 333 HEFLRACASPNS---FYLVENPHSMYDAFSHIGKDI 365
E +++ AS + F+ V + ++ +G+ I
Sbjct: 161 VEEIKSIASEPTEKHFFNVSDELALVTIVKTLGERI 196