HHsearch alignment for GI: 254780935 and conserved domain: PRK10672
>PRK10672 rare lipoprotein A; Provisional.
Probab=100.00 E-value=0 Score=386.90 Aligned_cols=246 Identities=25% Similarity=0.340 Sum_probs=182.2
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCEEECCEEEEEC-CCCCC
Q ss_conf 9999999999853135877665443233777666766---5421135664766777303579869824889625-78782
Q gi|254780935|r 11 KGSVVCVVVLGMSSCFFSSTYKDDKLEYFPESMYGVT---ASDRIVSGKRVPRGGGRYFLGKPYQIMGRWYVPR-QYTAY 86 (276)
Q Consensus 11 k~si~~i~~l~lssCs~~~~~~~~~~~~~p~~~~~~~---~s~~~~~~~~~p~~~~~y~vg~PY~v~Gk~Y~P~-~~~~y 86 (276)
T Consensus 4 ~wl~~~~~~~ll~~c~~~~~~~~~~~-~p~~~~~~~p~~ei~~a~pr~ep~~~~~-----n~~y~~~g~~y~~~~~~~~~ 77 (369)
T PRK10672 4 QWLGICIAAGLLAACTSDDGQQQTVS-QPQPAVCNGPTVEISGAEPRYEPLNPTA-----NQDYQRDGKSYKIVQDPSNF 77 (369)
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCC-----CCCCEECCEEEEECCCCCCC
T ss_conf 35899999999865258864556667-8987678876122699985767877678-----99928888886767688887
Q ss_pred EEEEEEEEECCCCCCCCCCCCCEECCCCCEEECCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCEEEECCHHHHHHHC
Q ss_conf 46799888568416870658872246101020366899848999988998579999668888869618775889998709
Q gi|254780935|r 87 AAVGMASWYGKAFHGRLTANGEVYGTEYITAAHPTLPLPSYVRVTNMENGISLVVRVNDRGPYHSNRLIDLSNAAAKILR 166 (276)
Q Consensus 87 ~~~G~ASwYg~~f~G~~TAnGE~~~~~~lTAAH~tLPl~s~VrVTNl~nGrsvvVrVNDRGPf~~gRiIDLS~~AA~~Lg 166 (276)
T Consensus 78 ~~~g~aswyg~~~~g~~ta~ge~~d~~~~taah~tlp~ps~v~vtnl~ng~~~vvrvndRGpf~~~riidls~aaa~~lg 157 (369)
T PRK10672 78 SQAGLAAIYDAEPGSNLTASGEAFDPNQLTAAHPTLPIPSYARITNLANGRMIVVRINDRGPYGPGRVISLSRAAADRLN 157 (369)
T ss_pred CEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEECCHHHHHHHC
T ss_conf 54789877077668871678773276422211557899877999988899889999848999999966665899999728
Q ss_pred CCCCCEEEEEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCEECCCC--C------CHHH
Q ss_conf 7325818999999852867877048888762168654443012110024421000234442034777--8------5434
Q gi|254780935|r 167 VEERGVSKVHVEYLGMALLNGMDQEYLRSTVMVNSATVLPLGCQYREEIVVIPYLLTRSRTVHLNNC--D------DDSL 238 (276)
Q Consensus 167 ~~~~Gva~V~ve~lg~a~~~~~d~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~------~~s~ 238 (276)
T Consensus 158 ~~~--~a~VrVe~I~vap----------dg~lsGpGt~gt~vakqsyAlP~Rp~l~~~~~s~~~~~a~~~~~v~pi~n~~ 225 (369)
T PRK10672 158 TSN--NTKVRIDPIIVAQ----------DGSLSGPGMAGTTVAKQTYALPARPDLSGGMGTPSQQDAPPQGDVLPVSNST 225 (369)
T ss_pred CCC--CCEEEEEEEEECC----------CCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 767--7505787776357----------6553566554531000012465654334455664323455555444322334
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCCCCC
Q ss_conf 211100000013455323775667610013686644
Q gi|254780935|r 239 QKQREISLRERKKSNLIPLPNGYSPPRKMGKIPIPS 274 (276)
Q Consensus 239 ~k~~~~~~~~~~~~~~~~~p~~~ap~~~~~~~p~p~ 274 (276)
T Consensus 226 l~~~d~~~ap~~~~g~l~ap~~~~~~vl~~s~P~~~ 261 (369)
T PRK10672 226 LKSEDPTGAPVTSSGFLGAPTTLAPGVLEGSEPTPA 261 (369)
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 466555566544554446766556544456677776