HHsearch alignment for GI: 254780935 and conserved domain: smart00837
>smart00837 DPBB_1 Rare lipoprotein A (RlpA)-like double-psi beta-barrel. Rare lipoprotein A (RlpA) contains a conserved region that has the double-psi beta-barrel (DPBB) fold. The function of RlpA is not well understood, but it has been shown to act as a prc mutant suppressor in Escherichia coli. The DPBB fold is often an enzymatic domain. The members of this family are quite diverse, and if catalytic this family may contain several different functions. Another example of this domain is found in the N terminus of pollen allergen.
Probab=93.62 E-value=0.077 Score=30.72 Aligned_cols=42 Identities=24% Similarity=0.295 Sum_probs=35.6
Q ss_pred CCCEEEEEECCCCCCC-------------CCEEEECCHHHHHHHCCCCCCEEEEE
Q ss_conf 9857999966888886-------------96187758899987097325818999
Q gi|254780935|r 135 NGISLVVRVNDRGPYH-------------SNRLIDLSNAAAKILRVEERGVSKVH 176 (276)
Q Consensus 135 nGrsvvVrVNDRGPf~-------------~gRiIDLS~~AA~~Lg~~~~Gva~V~ 176 (276)
T Consensus 32 ~g~sv~VtaTn~CPpn~~~~~~~ggwCnpp~~HFDLS~pAF~~iA~~~aGivpV~ 86 (87)
T smart00837 32 PGGSITVTATNFCPPNYALSNDNGGWCNPPRKHFDLSQPAFEKIAQYKAGIVPVK 86 (87)
T ss_pred CCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEECCC
T ss_conf 9993899885678987566766897689998472779999999987638741112