HHSEARCH alignment of GI: 254780935 and SCOP domain: d1wc2a1

Alignment

Probab=97.23  E-value=0.00091  Score=39.74  Aligned_cols=92  Identities=16%  Similarity=0.218  Sum_probs=64.6

Q ss_pred             EEEEEEEECCCCCCCCCCCC--CE-----EC--CCCCEEECCC------------CCCCCEEEEEEC-----------CC
Q ss_conf             67998885684168706588--72-----24--6101020366------------899848999988-----------99
Q gi|254780935|r   88 AVGMASWYGKAFHGRLTANG--EV-----YG--TEYITAAHPT------------LPLPSYVRVTNM-----------EN  135 (276)
Q Consensus        88 ~~G~ASwYg~~f~G~~TAnG--E~-----~~--~~~lTAAH~t------------LPl~s~VrVTNl-----------~n  135 (276)
                      ....|+|||+...|   |.|  ..     |.  ...+|||-.+            .-.|.-.+|+-.           ..
T Consensus        15 ~~A~aT~Ygd~~~G---ACGyG~~~~~~~~~~g~G~~tAAlS~~lf~~~~~~~~G~~CG~CyeV~C~~~~~~~~~~~~~~   91 (180)
T d1wc2a1          15 SCASTTNYHDSHKG---ACGCGPASGDAQFGWNAGSFVAAASQMYFDSGNKGWCGQHCGQCIKLTTTGGYVPGQGGPVRE   91 (180)
T ss_dssp             EEEEEEEECCCBCT---TTTCSCSSSSBCCSSGGGSCEEEEEHHHHCTTCCSSSCTTTTCEEEEEEEEEECTTSCCCCCT
T ss_pred             CCCCEEEECCCCCC---CCCCCCCCCCCCCCCCCCCEEEECCHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCC
T ss_conf             45525785798987---787873778775344775367652687716776543662347779999789997766877789


Q ss_pred             CCEEEEEECCCCCCC--CC------------------EEEECCHHHHHHHCCCCCCEEEEEEEEEECC
Q ss_conf             857999966888886--96------------------1877588999870973258189999998528
Q gi|254780935|r  136 GISLVVRVNDRGPYH--SN------------------RLIDLSNAAAKILRVEERGVSKVHVEYLGMA  183 (276)
Q Consensus       136 GrsvvVrVNDRGPf~--~g------------------RiIDLS~~AA~~Lg~~~~Gva~V~ve~lg~a  183 (276)
                      |+||+|+|+|-.|-.  .+                  ..+|||. ++.++.-.+.|+..|..+.+.=.
T Consensus        92 g~sV~V~iTd~CP~n~~n~gWCn~p~~~~~~n~~g~~~HFDLs~-af~~ia~~~~G~v~V~yrrV~C~  158 (180)
T d1wc2a1          92 GLSKTFMITNLCPNIYPNQDWCNQGSQYGGHNKYGYELHLDLEN-GRSQVTGMGWNNPETTWEVVNCD  158 (180)
T ss_dssp             TCEEEEEEEEEECSSTTSTTTSCCSSSSSCCCTTSCSEEEEEEC-TTSTTGGGTCSSEEEEEEEECHH
T ss_pred             CCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECHH-HHHHHHHHCCCCCEEEEEEEECC
T ss_conf             98289999736998788887668865455555667631251348-99987652179642589996179

SCOP domain information

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Eng V-like
domain: Endoglucanase (CMCase)
species: Blue mussel (Mytilus edulis) [TaxId: 6550]