BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780936|ref|YP_003065349.1| hypothetical protein CLIBASIA_04175 [Candidatus Liberibacter asiaticus str. psy62] (182 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done Results from round 1 >gi|254780936|ref|YP_003065349.1| hypothetical protein CLIBASIA_04175 [Candidatus Liberibacter asiaticus str. psy62] gi|254040613|gb|ACT57409.1| hypothetical protein CLIBASIA_04175 [Candidatus Liberibacter asiaticus str. psy62] Length = 182 Score = 376 bits (966), Expect = e-103, Method: Compositional matrix adjust. Identities = 182/182 (100%), Positives = 182/182 (100%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF Sbjct: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS Sbjct: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED Sbjct: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 Query: 181 KK 182 KK Sbjct: 181 KK 182 >gi|315122349|ref|YP_004062838.1| hypothetical protein CKC_03005 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495751|gb|ADR52350.1| hypothetical protein CKC_03005 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 205 Score = 318 bits (816), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 150/179 (83%), Positives = 169/179 (94%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFDPREKIALFIDGANLYA+SKALGFDIDYRKLLKAF++RA V+RAYYYTTV+GD +QQ+ Sbjct: 1 MFDPREKIALFIDGANLYAASKALGFDIDYRKLLKAFKARARVLRAYYYTTVLGDSDQQY 60 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SPLHPLLDWLHYNGF+VV+KVAKEFTE+CGRK++K+SMDVELAVDAFEQSEG++HLVIFS Sbjct: 61 SPLHPLLDWLHYNGFKVVSKVAKEFTESCGRKKIKASMDVELAVDAFEQSEGIDHLVIFS 120 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F TLV ALQRK KKVTIVSTVLS+PSM SDQLRRQAD+F+DLAYLKNEI R+ E Sbjct: 121 GDGDFATLVEALQRKSKKVTIVSTVLSNPSMVSDQLRRQADHFIDLAYLKNEIQRESCE 179 >gi|15964816|ref|NP_385169.1| hypothetical protein SMc02407 [Sinorhizobium meliloti 1021] gi|307300886|ref|ZP_07580655.1| protein of unknown function DUF88 [Sinorhizobium meliloti BL225C] gi|307320703|ref|ZP_07600115.1| protein of unknown function DUF88 [Sinorhizobium meliloti AK83] gi|15073995|emb|CAC45642.1| Conserved hypothetical protein [Sinorhizobium meliloti 1021] gi|306893630|gb|EFN24404.1| protein of unknown function DUF88 [Sinorhizobium meliloti AK83] gi|306903841|gb|EFN34427.1| protein of unknown function DUF88 [Sinorhizobium meliloti BL225C] Length = 192 Score = 255 bits (651), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 118/179 (65%), Positives = 151/179 (84%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R ++RAYYYT ++ D Q++ Sbjct: 1 MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+ELA+DA EQSE ++HLVIFS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPAKEFTDSLGRRKIKGNMDIELAIDAMEQSESVDHLVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG FTTLV ALQRK +KV++VST+ + P M +D LRRQAD+F+DLA L+ EI R+P E Sbjct: 119 GDGDFTTLVEALQRKGRKVSVVSTMSTQPPMIADDLRRQADHFIDLATLRGEIGREPSE 177 >gi|51102762|gb|AAT95984.1| RtsE [Sinorhizobium meliloti] Length = 191 Score = 254 bits (650), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 118/179 (65%), Positives = 151/179 (84%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R ++RAYYYT ++ D Q++ Sbjct: 1 MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+ELA+DA EQSE ++HLVIFS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPAKEFTDSLGRRKIKGNMDIELAIDAMEQSESVDHLVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG FTTLV ALQRK +KV++VST+ + P M +D LRRQAD+F+DLA L+ EI R+P E Sbjct: 119 GDGDFTTLVEALQRKGRKVSVVSTMSTQPPMIADDLRRQADHFIDLATLRGEIGREPSE 177 >gi|227821396|ref|YP_002825366.1| hypothetical protein NGR_c08220 [Sinorhizobium fredii NGR234] gi|227340395|gb|ACP24613.1| hypothetical protein NGR_c08220 [Sinorhizobium fredii NGR234] Length = 192 Score = 254 bits (650), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 118/179 (65%), Positives = 151/179 (84%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R ++RAYYYT ++ D Q++ Sbjct: 1 MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+ELA+DA EQSE ++HLVIFS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPAKEFTDSLGRRKIKGNMDIELAIDAMEQSETVDHLVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG FTTLV ALQRK +KV++VST+ + P M +D LRRQAD+F+DLA L+ EI R+P E Sbjct: 119 GDGDFTTLVEALQRKGRKVSVVSTMSTQPPMIADDLRRQADHFIDLATLRGEIGREPSE 177 >gi|222148076|ref|YP_002549033.1| hypothetical protein Avi_1440 [Agrobacterium vitis S4] gi|221735064|gb|ACM36027.1| conserved hypothetical protein [Agrobacterium vitis S4] Length = 192 Score = 254 bits (650), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 119/179 (66%), Positives = 150/179 (83%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R ++RAYYYT ++ D Q++ Sbjct: 1 MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++V+ K AKEFT++ GR++VK +MD+ELA+DA EQSE ++HLVIFS Sbjct: 59 SSIRPLIDWLDYNGYKVITKPAKEFTDSMGRRKVKGNMDIELAIDAMEQSETVDHLVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG FTTLV ALQRK +KV++VST+ + P M +D LRRQAD+F+DL LK EI RDP E Sbjct: 119 GDGDFTTLVEALQRKGRKVSVVSTMSTQPPMIADDLRRQADHFIDLVSLKAEIGRDPSE 177 >gi|150395899|ref|YP_001326366.1| hypothetical protein Smed_0675 [Sinorhizobium medicae WSM419] gi|150027414|gb|ABR59531.1| protein of unknown function DUF88 [Sinorhizobium medicae WSM419] Length = 193 Score = 254 bits (650), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 118/179 (65%), Positives = 151/179 (84%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R ++RAYYYT ++ D Q++ Sbjct: 2 MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 59 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+ELA+DA EQSE ++HLVIFS Sbjct: 60 SSIRPLIDWLDYNGYKVVTKPAKEFTDSLGRRKIKGNMDIELAIDAMEQSESVDHLVIFS 119 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG FTTLV ALQRK +KV++VST+ + P M +D LRRQAD+F+DLA L+ EI R+P E Sbjct: 120 GDGDFTTLVEALQRKGRKVSVVSTMATQPPMIADDLRRQADHFIDLASLRAEIGREPSE 178 >gi|159184584|ref|NP_354050.2| hypothetical protein Atu1028 [Agrobacterium tumefaciens str. C58] gi|159139886|gb|AAK86835.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58] Length = 189 Score = 253 bits (647), Expect = 7e-66, Method: Compositional matrix adjust. Identities = 119/179 (66%), Positives = 150/179 (83%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R ++RAYYYT ++ D Q++ Sbjct: 1 MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K AKEFT+ GR+++K +MD+ELAVDA EQSE ++HLV+FS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPAKEFTDALGRRKIKGNMDIELAVDAMEQSETVDHLVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG FTTLV ALQRK +KV++VST+ + P+M +D LRRQAD+F+DL LK EI RDP E Sbjct: 119 GDGDFTTLVDALQRKGRKVSVVSTMATQPAMIADDLRRQADHFIDLMTLKAEIGRDPSE 177 >gi|325292407|ref|YP_004278271.1| hypothetical protein AGROH133_05017 [Agrobacterium sp. H13-3] gi|325060260|gb|ADY63951.1| hypothetical protein AGROH133_05017 [Agrobacterium sp. H13-3] Length = 189 Score = 252 bits (644), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 118/179 (65%), Positives = 150/179 (83%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R ++RAYYYT ++ D Q++ Sbjct: 1 MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K AKEFT+ GR+++K +MD+ELAVDA EQSE ++HLV+FS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPAKEFTDALGRRKIKGNMDIELAVDAMEQSETVDHLVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG FT LV ALQRK +KV++VST+ + P+M +D LRRQAD+F+DL LK EI RDP+E Sbjct: 119 GDGDFTKLVDALQRKGRKVSVVSTMATQPAMIADDLRRQADHFIDLMTLKAEIGRDPNE 177 >gi|227819053|ref|YP_002823024.1| hypothetical protein NGR_b08150 [Sinorhizobium fredii NGR234] gi|227338052|gb|ACP22271.1| conserved hypothetical protein [Sinorhizobium fredii NGR234] Length = 194 Score = 252 bits (643), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 119/179 (66%), Positives = 149/179 (83%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFDPREKIALFIDGANL+A+SK LGFDIDYRKLL+AFRSRA ++RAYYYT ++ D E F Sbjct: 1 MFDPREKIALFIDGANLFATSKTLGFDIDYRKLLEAFRSRAYLLRAYYYTALIEDLE--F 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG+ VV K AKEFT++ GR+++K SMD+ELA+DA E S+ ++H VIFS Sbjct: 59 SSIRPLIDWLDYNGYTVVTKPAKEFTDSQGRRKIKGSMDIELAIDAMEHSQTVDHFVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG FT LV ALQRK +KV++VST+L+ P M +DQLRRQAD+F+DLA L++EI R P E Sbjct: 119 GDGDFTPLVEALQRKGRKVSVVSTILTQPPMIADQLRRQADHFIDLATLRSEIGRHPRE 177 >gi|222085384|ref|YP_002543914.1| hypothetical protein Arad_1584 [Agrobacterium radiobacter K84] gi|221722832|gb|ACM25988.1| conserved hypothetical protein [Agrobacterium radiobacter K84] Length = 194 Score = 251 bits (642), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 116/179 (64%), Positives = 150/179 (83%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R ++RAYYYT ++ D Q++ Sbjct: 1 MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+ELA+DA EQSE ++HLVIFS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPAKEFTDSMGRRKIKGNMDIELAIDAMEQSETVDHLVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG FTTLV ALQR+ +KV+++ST+ + P M +D LRRQAD+F+DL LK EI RDP + Sbjct: 119 GDGDFTTLVEALQRRGRKVSVISTMATQPPMIADDLRRQADHFIDLVSLKAEIGRDPSD 177 >gi|116251270|ref|YP_767108.1| hypothetical protein RL1504 [Rhizobium leguminosarum bv. viciae 3841] gi|115255918|emb|CAK06999.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae 3841] Length = 193 Score = 251 bits (641), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 116/179 (64%), Positives = 149/179 (83%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R ++RAYYYT ++ D Q++ Sbjct: 1 MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+ELA+DA EQSE ++HLVIFS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPAKEFTDSMGRRKIKGNMDIELAIDAMEQSETVDHLVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG FT LV ALQR+ +KV+++ST+ + P M +D LRRQAD+F+DL LK EI RDP E Sbjct: 119 GDGDFTNLVEALQRRGRKVSVISTMATQPPMIADDLRRQADHFIDLLSLKAEIGRDPSE 177 >gi|241203882|ref|YP_002974978.1| hypothetical protein Rleg_1144 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240857772|gb|ACS55439.1| protein of unknown function DUF88 [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 193 Score = 251 bits (641), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 116/179 (64%), Positives = 149/179 (83%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R ++RAYYYT ++ D Q++ Sbjct: 1 MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+ELA+DA EQSE ++HLVIFS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPAKEFTDSMGRRKIKGNMDIELAIDAMEQSETVDHLVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG FT LV ALQR+ +KV+++ST+ + P M +D LRRQAD+F+DL LK EI RDP E Sbjct: 119 GDGDFTNLVEALQRRGRKVSVISTMATQPPMIADDLRRQADHFIDLLSLKAEIGRDPSE 177 >gi|190891066|ref|YP_001977608.1| hypothetical protein RHECIAT_CH0001451 [Rhizobium etli CIAT 652] gi|218508406|ref|ZP_03506284.1| hypothetical protein RetlB5_12894 [Rhizobium etli Brasil 5] gi|190696345|gb|ACE90430.1| hypothetical conserved protein [Rhizobium etli CIAT 652] gi|327191317|gb|EGE58350.1| hypothetical protein RHECNPAF_32006 [Rhizobium etli CNPAF512] Length = 193 Score = 251 bits (640), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 116/179 (64%), Positives = 149/179 (83%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R ++RAYYYT ++ D Q++ Sbjct: 1 MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+ELA+DA EQSE ++HLVIFS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPAKEFTDSMGRRKIKGNMDIELAIDAMEQSETVDHLVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG FT LV ALQR+ +KV+++ST+ + P M +D LRRQAD+F+DL LK EI RDP E Sbjct: 119 GDGDFTNLVEALQRRGRKVSVISTMATQPPMIADDLRRQADHFIDLLSLKAEIGRDPSE 177 >gi|218678619|ref|ZP_03526516.1| hypothetical protein RetlC8_06939 [Rhizobium etli CIAT 894] Length = 193 Score = 250 bits (639), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 116/179 (64%), Positives = 149/179 (83%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R ++RAYYYT ++ D Q++ Sbjct: 1 MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+ELA+DA EQSE ++HLVIFS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPAKEFTDSMGRRKIKGNMDIELAIDAMEQSETVDHLVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG FT LV ALQR+ +KV+++ST+ + P M +D LRRQAD+F+DL LK EI RDP E Sbjct: 119 GDGDFTNLVEALQRRGRKVSVISTMATQPPMIADDLRRQADHFIDLLSLKAEIGRDPAE 177 >gi|86357021|ref|YP_468913.1| hypothetical protein RHE_CH01383 [Rhizobium etli CFN 42] gi|86281123|gb|ABC90186.1| hypothetical conserved protein [Rhizobium etli CFN 42] Length = 193 Score = 250 bits (639), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 116/179 (64%), Positives = 149/179 (83%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R ++RAYYYT ++ D Q++ Sbjct: 1 MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+ELA+DA EQSE ++HLVIFS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPAKEFTDSMGRRKIKGNMDIELAIDAMEQSETVDHLVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG FT LV ALQR+ +KV+++ST+ + P M +D LRRQAD+F+DL LK EI RDP E Sbjct: 119 GDGDFTNLVEALQRRGRKVSVISTMATQPPMIADDLRRQADHFIDLLSLKAEIGRDPAE 177 >gi|209548594|ref|YP_002280511.1| hypothetical protein Rleg2_0991 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209534350|gb|ACI54285.1| protein of unknown function DUF88 [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 195 Score = 250 bits (638), Expect = 7e-65, Method: Compositional matrix adjust. Identities = 116/179 (64%), Positives = 149/179 (83%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R ++RAYYYT ++ D Q++ Sbjct: 1 MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+ELA+DA EQSE ++HLVIFS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPAKEFTDSMGRRKIKGNMDIELAIDAMEQSETVDHLVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG FT LV ALQR+ +KV+++ST+ + P M +D LRRQAD+F+DL LK EI RDP E Sbjct: 119 GDGDFTNLVEALQRRGRKVSVISTMSTQPPMIADDLRRQADHFIDLLSLKAEIGRDPAE 177 >gi|163760601|ref|ZP_02167682.1| hypothetical protein HPDFL43_11921 [Hoeflea phototrophica DFL-43] gi|162282216|gb|EDQ32506.1| hypothetical protein HPDFL43_11921 [Hoeflea phototrophica DFL-43] Length = 196 Score = 247 bits (630), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 115/179 (64%), Positives = 150/179 (83%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFDPREKIALFIDGANLYA+SK+L FDIDYRKLLK+F+ R ++RAYYYT ++ D Q++ Sbjct: 1 MFDPREKIALFIDGANLYAASKSLNFDIDYRKLLKSFQGRGYLLRAYYYTALIED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K AKEFT++ GR++VK +MD+ELA+DA EQ+E ++HLVIFS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPAKEFTDSMGRRKVKGNMDIELAIDAMEQAEVVDHLVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG FT+LV ALQRK +KVT+VS++ + P M +D LRRQADYF+DL+ LK+EI R+ E Sbjct: 119 GDGDFTSLVEALQRKGRKVTVVSSLSTQPPMIADDLRRQADYFLDLSTLKSEIGRESSE 177 >gi|13476434|ref|NP_108004.1| hypothetical protein mll7752 [Mesorhizobium loti MAFF303099] gi|319784512|ref|YP_004143988.1| hypothetical protein Mesci_4829 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|14027195|dbj|BAB54149.1| mll7752 [Mesorhizobium loti MAFF303099] gi|317170400|gb|ADV13938.1| hypothetical protein Mesci_4829 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 193 Score = 246 bits (629), Expect = 8e-64, Method: Compositional matrix adjust. Identities = 116/179 (64%), Positives = 146/179 (81%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFDPREKIALFIDGANLYA+S+ALGFDIDYRKLL +F+ R ++RAYYYT +V D Q++ Sbjct: 1 MFDPREKIALFIDGANLYATSRALGFDIDYRKLLSSFQKRGYLLRAYYYTALVED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNGF+VV K AKEFT++ GR+++K +MD+EL VDA E ++ ++H VIFS Sbjct: 59 SSIRPLIDWLDYNGFKVVTKPAKEFTDSTGRRKIKGNMDIELTVDALELADVVDHYVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F TLV ALQR+ +KV+IVST+ S P M SD LRRQAD+F+DL LKNE+ RDP E Sbjct: 119 GDGDFRTLVEALQRRGRKVSIVSTMASQPPMISDDLRRQADHFIDLTTLKNEVGRDPSE 177 >gi|260462331|ref|ZP_05810539.1| protein of unknown function DUF88 [Mesorhizobium opportunistum WSM2075] gi|259031825|gb|EEW33093.1| protein of unknown function DUF88 [Mesorhizobium opportunistum WSM2075] Length = 193 Score = 246 bits (628), Expect = 9e-64, Method: Compositional matrix adjust. Identities = 116/179 (64%), Positives = 146/179 (81%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFDPREKIALFIDGANLYA+S+ALGFDIDYRKLL +F+ R ++RAYYYT +V D Q++ Sbjct: 1 MFDPREKIALFIDGANLYATSRALGFDIDYRKLLSSFQKRGYLLRAYYYTALVED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNGF+VV K AKEFT++ GR+++K +MD+EL VDA E ++ ++H VIFS Sbjct: 59 SSIRPLIDWLDYNGFKVVTKPAKEFTDSTGRRKIKGNMDIELTVDALELADVVDHYVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F TLV ALQR+ +KV+IVST+ S P M SD LRRQAD+F+DL LKNE+ RDP E Sbjct: 119 GDGDFRTLVEALQRRGRKVSIVSTMASQPPMISDDLRRQADHFIDLVTLKNEVGRDPSE 177 >gi|256060778|ref|ZP_05450940.1| hypothetical protein Bneo5_10505 [Brucella neotomae 5K33] gi|256369087|ref|YP_003106595.1| hypothetical protein BMI_I648 [Brucella microti CCM 4915] gi|261324768|ref|ZP_05963965.1| conserved hypothetical protein [Brucella neotomae 5K33] gi|306842086|ref|ZP_07474758.1| cytoplasmic protein [Brucella sp. BO2] gi|306845250|ref|ZP_07477826.1| cytoplasmic protein [Brucella sp. BO1] gi|255999247|gb|ACU47646.1| hypothetical protein BMI_I648 [Brucella microti CCM 4915] gi|261300748|gb|EEY04245.1| conserved hypothetical protein [Brucella neotomae 5K33] gi|306274409|gb|EFM56216.1| cytoplasmic protein [Brucella sp. BO1] gi|306287836|gb|EFM59259.1| cytoplasmic protein [Brucella sp. BO2] Length = 191 Score = 244 bits (622), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 114/179 (63%), Positives = 146/179 (81%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFD REKIALFIDGANLYA+SK LGFDIDYRKLLKAF+ R ++RAYYYT +V D Q++ Sbjct: 1 MFDSREKIALFIDGANLYAASKTLGFDIDYRKLLKAFQKRGYLLRAYYYTALVED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K AKEFT++ GR++VK +MD+EL VDA + ++ ++H VIFS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKAAKEFTDSTGRRKVKGNMDIELTVDAMQLTDTVDHFVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F +LV ALQRK +KV++VST+ + P+M SD+LRRQAD+F+DL LK EI RDP E Sbjct: 119 GDGDFRSLVEALQRKGRKVSVVSTLTTQPAMISDELRRQADHFIDLVSLKAEIGRDPSE 177 >gi|62289609|ref|YP_221402.1| hypothetical protein BruAb1_0666 [Brucella abortus bv. 1 str. 9-941] gi|82699537|ref|YP_414111.1| hypothetical protein BAB1_0669 [Brucella melitensis biovar Abortus 2308] gi|189023863|ref|YP_001934631.1| hypothetical protein BAbS19_I06260 [Brucella abortus S19] gi|237815104|ref|ZP_04594102.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A] gi|254688926|ref|ZP_05152180.1| hypothetical protein Babob68_01821 [Brucella abortus bv. 6 str. 870] gi|254693408|ref|ZP_05155236.1| hypothetical protein Babob3T_01839 [Brucella abortus bv. 3 str. Tulya] gi|254697060|ref|ZP_05158888.1| hypothetical protein Babob28_04920 [Brucella abortus bv. 2 str. 86/8/59] gi|254729957|ref|ZP_05188535.1| hypothetical protein Babob42_01839 [Brucella abortus bv. 4 str. 292] gi|256257174|ref|ZP_05462710.1| hypothetical protein Babob9C_07408 [Brucella abortus bv. 9 str. C68] gi|260545634|ref|ZP_05821375.1| conserved hypothetical protein [Brucella abortus NCTC 8038] gi|260754412|ref|ZP_05866760.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870] gi|260757631|ref|ZP_05869979.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292] gi|260761458|ref|ZP_05873801.1| conserved hypothetical protein [Brucella abortus bv. 2 str. 86/8/59] gi|260883440|ref|ZP_05895054.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68] gi|261213658|ref|ZP_05927939.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya] gi|297248021|ref|ZP_06931739.1| conserved hypothetical protein [Brucella abortus bv. 5 str. B3196] gi|62195741|gb|AAX74041.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941] gi|82615638|emb|CAJ10625.1| Protein of unknown function DUF88 [Brucella melitensis biovar Abortus 2308] gi|189019435|gb|ACD72157.1| Protein of unknown function DUF88 [Brucella abortus S19] gi|237789941|gb|EEP64151.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A] gi|260097041|gb|EEW80916.1| conserved hypothetical protein [Brucella abortus NCTC 8038] gi|260667949|gb|EEX54889.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292] gi|260671890|gb|EEX58711.1| conserved hypothetical protein [Brucella abortus bv. 2 str. 86/8/59] gi|260674520|gb|EEX61341.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870] gi|260872968|gb|EEX80037.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68] gi|260915265|gb|EEX82126.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya] gi|297175190|gb|EFH34537.1| conserved hypothetical protein [Brucella abortus bv. 5 str. B3196] Length = 191 Score = 243 bits (619), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 113/179 (63%), Positives = 146/179 (81%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFD REKIALFIDGANLYA+SK LGFDIDYRKLLKAF+ R ++RAYYYT +V D Q++ Sbjct: 1 MFDSREKIALFIDGANLYAASKTLGFDIDYRKLLKAFQKRGYLLRAYYYTALVED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K A+EFT++ GR++VK +MD+EL VDA + ++ ++H VIFS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKAAREFTDSTGRRKVKGNMDIELTVDAMQLTDTVDHFVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F +LV ALQRK +KV++VST+ + P+M SD+LRRQAD+F+DL LK EI RDP E Sbjct: 119 GDGDFRSLVEALQRKGRKVSVVSTLTTQPAMISDELRRQADHFIDLVSLKAEIGRDPSE 177 >gi|254713779|ref|ZP_05175590.1| hypothetical protein BcetM6_10570 [Brucella ceti M644/93/1] gi|254717164|ref|ZP_05178975.1| hypothetical protein BcetM_12234 [Brucella ceti M13/05/1] gi|261218981|ref|ZP_05933262.1| conserved hypothetical protein [Brucella ceti M13/05/1] gi|261321520|ref|ZP_05960717.1| conserved hypothetical protein [Brucella ceti M644/93/1] gi|260924070|gb|EEX90638.1| conserved hypothetical protein [Brucella ceti M13/05/1] gi|261294210|gb|EEX97706.1| conserved hypothetical protein [Brucella ceti M644/93/1] Length = 191 Score = 242 bits (618), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 114/179 (63%), Positives = 146/179 (81%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFD REKIALFIDGANLYA+SK LGFDIDYRKLLKAF+ R ++RAYYYT +V D Q++ Sbjct: 1 MFDSREKIALFIDGANLYAASKTLGFDIDYRKLLKAFQKRGYLLRAYYYTALVED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K AKEFT++ GR++VK +MD+EL VDA + ++ ++H VIFS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKAAKEFTDSTGRRKVKGNMDIELTVDAKQLTDTVDHFVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F +LV ALQRK +KV++VST+ + P+M SD+LRRQAD+F+DL LK EI RDP E Sbjct: 119 GDGDFRSLVEALQRKGRKVSVVSTLTTQPAMISDELRRQADHFIDLVSLKAEIGRDPSE 177 >gi|254718792|ref|ZP_05180603.1| hypothetical protein Bru83_04498 [Brucella sp. 83/13] gi|265983772|ref|ZP_06096507.1| conserved hypothetical protein [Brucella sp. 83/13] gi|306837511|ref|ZP_07470386.1| cytoplasmic protein [Brucella sp. NF 2653] gi|264662364|gb|EEZ32625.1| conserved hypothetical protein [Brucella sp. 83/13] gi|306407403|gb|EFM63607.1| cytoplasmic protein [Brucella sp. NF 2653] Length = 202 Score = 242 bits (618), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 113/179 (63%), Positives = 145/179 (81%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFD REKI LFIDGANLYA+SK LGFDIDYRKLLKAF+ R ++RAYYYT +V D Q++ Sbjct: 1 MFDSREKIVLFIDGANLYAASKTLGFDIDYRKLLKAFQKRGYLLRAYYYTALVED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K AKEFT++ GR++VK +MD+EL VDA + ++ ++H VIFS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKAAKEFTDSTGRRKVKGNMDIELTVDAMQLTDTVDHFVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F +LV ALQRK +KV++VST+ + P+M SD+LRRQAD+F+DL LK EI RDP E Sbjct: 119 GDGDFRSLVEALQRKGRKVSVVSTLTTQPAMISDELRRQADHFIDLVSLKAEIGRDPSE 177 >gi|23501536|ref|NP_697663.1| hypothetical protein BR0649 [Brucella suis 1330] gi|161618620|ref|YP_001592507.1| hypothetical protein BCAN_A0662 [Brucella canis ATCC 23365] gi|163842921|ref|YP_001627325.1| hypothetical protein BSUIS_A0677 [Brucella suis ATCC 23445] gi|254703984|ref|ZP_05165812.1| hypothetical protein Bsuib36_08664 [Brucella suis bv. 3 str. 686] gi|260566769|ref|ZP_05837239.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40] gi|261754636|ref|ZP_05998345.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686] gi|23347446|gb|AAN29578.1| conserved hypothetical protein [Brucella suis 1330] gi|161335431|gb|ABX61736.1| Hypothetical protein BCAN_A0662 [Brucella canis ATCC 23365] gi|163673644|gb|ABY37755.1| Hypothetical protein BSUIS_A0677 [Brucella suis ATCC 23445] gi|260156287|gb|EEW91367.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40] gi|261744389|gb|EEY32315.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686] Length = 191 Score = 242 bits (618), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 113/179 (63%), Positives = 146/179 (81%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFD REKIALFI+GANLYA+SK LGFDIDYRKLLKAF+ R ++RAYYYT +V D Q++ Sbjct: 1 MFDSREKIALFINGANLYAASKTLGFDIDYRKLLKAFQKRGYLLRAYYYTALVED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K AKEFT++ GR++VK +MD+EL VDA + ++ ++H VIFS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKAAKEFTDSTGRRKVKGNMDIELTVDAMQLTDTVDHFVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F +LV ALQRK +KV++VST+ + P+M SD+LRRQAD+F+DL LK EI RDP E Sbjct: 119 GDGDFRSLVEALQRKGRKVSVVSTLTTQPAMISDELRRQADHFIDLVSLKAEIGRDPSE 177 >gi|153009965|ref|YP_001371180.1| hypothetical protein Oant_2638 [Ochrobactrum anthropi ATCC 49188] gi|151561853|gb|ABS15351.1| protein of unknown function DUF88 [Ochrobactrum anthropi ATCC 49188] Length = 191 Score = 242 bits (617), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 113/179 (63%), Positives = 145/179 (81%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFD REKIALFIDGANLYA+SK LGFDIDYRKLLKAF+ R ++RAYYYT +V D Q++ Sbjct: 1 MFDSREKIALFIDGANLYAASKTLGFDIDYRKLLKAFQKRGYLLRAYYYTALVED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K AKEFT++ GR++VK +MD+EL VDA + ++ ++H VIFS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKAAKEFTDSTGRRKVKGNMDIELTVDAMQLTDTVDHFVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F +L ALQRK +KV++VST+ + P+M SD+LRRQAD+F+DL LK EI RDP E Sbjct: 119 GDGDFRSLAEALQRKGRKVSVVSTLTTQPAMISDELRRQADHFIDLVSLKAEIGRDPSE 177 >gi|239831485|ref|ZP_04679814.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301] gi|239823752|gb|EEQ95320.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301] Length = 191 Score = 242 bits (617), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 113/179 (63%), Positives = 145/179 (81%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFD REKIALFIDGANLYA+SK LGFDIDYRKLLKAF+ R ++RAYYYT +V D Q++ Sbjct: 1 MFDSREKIALFIDGANLYAASKTLGFDIDYRKLLKAFQKRGYLLRAYYYTALVED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K AKEFT++ GR++VK +MD+EL VDA + ++ ++H VIFS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKAAKEFTDSTGRRKVKGNMDIELTVDAMQLTDTVDHFVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F +L ALQRK +KV++VST+ + P+M SD+LRRQAD+F+DL LK EI RDP E Sbjct: 119 GDGDFRSLAEALQRKGRKVSVVSTLTTQPAMISDELRRQADHFIDLVSLKAEIGRDPSE 177 >gi|307322278|ref|ZP_07601643.1| protein of unknown function DUF88 [Sinorhizobium meliloti AK83] gi|306892060|gb|EFN22881.1| protein of unknown function DUF88 [Sinorhizobium meliloti AK83] Length = 196 Score = 241 bits (615), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 115/177 (64%), Positives = 146/177 (82%), Gaps = 2/177 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFDPREKIALFIDGANL+A+SK+LGFDIDY KLL+AFR+RA ++RAYYYT ++ D E F Sbjct: 1 MFDPREKIALFIDGANLFAASKSLGFDIDYCKLLQAFRNRAYLLRAYYYTAIIEDLE--F 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG+ VV K AKEFT+ GR+++K +MD+ELA+DA EQS +HLVIFS Sbjct: 59 SSIRPLIDWLDYNGYTVVTKPAKEFTDAQGRRKIKGNMDIELAIDAMEQSRTADHLVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 GDG FTTLV LQRK +KV++VST+ + P M +D+LRRQAD+F+DLA L++EI R P Sbjct: 119 GDGDFTTLVETLQRKGRKVSVVSTMSTQPPMIADELRRQADHFIDLASLRSEIDRHP 175 >gi|307313917|ref|ZP_07593532.1| protein of unknown function DUF88 [Sinorhizobium meliloti BL225C] gi|306899191|gb|EFN29829.1| protein of unknown function DUF88 [Sinorhizobium meliloti BL225C] Length = 196 Score = 241 bits (615), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 115/177 (64%), Positives = 146/177 (82%), Gaps = 2/177 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFDPREKIALFIDGANL+A+SK+LGFDIDY KLL+AFR+RA ++RAYYYT ++ D E F Sbjct: 1 MFDPREKIALFIDGANLFAASKSLGFDIDYCKLLEAFRNRAYLLRAYYYTAIIEDLE--F 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG+ VV K AKEFT+ GR+++K +MD+ELA+DA EQS +HLVIFS Sbjct: 59 SSIRPLIDWLDYNGYTVVTKPAKEFTDAQGRRKIKGNMDIELAIDAMEQSRTADHLVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 GDG FTTLV LQRK +KV++VST+ + P M +D+LRRQAD+F+DLA L++EI R P Sbjct: 119 GDGDFTTLVETLQRKGRKVSVVSTMSTQPPMIADELRRQADHFIDLASLRSEIDRHP 175 >gi|227820632|ref|YP_002824602.1| hypothetical protein NGR_c00450 [Sinorhizobium fredii NGR234] gi|227339631|gb|ACP23849.1| conserved hypothetical protein [Sinorhizobium fredii NGR234] Length = 191 Score = 241 bits (614), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 115/177 (64%), Positives = 144/177 (81%), Gaps = 2/177 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFD REKIALFIDGANLYA+SK+LGFDIDYRKLL AF+ RA ++RAYYYT ++ D E F Sbjct: 1 MFDSREKIALFIDGANLYATSKSLGFDIDYRKLLSAFQKRAYLVRAYYYTALIEDLE--F 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG+ VV K AKEFT+ GR+++K SMDVELA+DA EQ + ++H V+FS Sbjct: 59 SSIRPLIDWLDYNGYTVVTKPAKEFTDALGRRKIKGSMDVELAIDALEQRQVVDHYVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 GDG FTTLVAALQR +KVT+VST+ + P M +D+LRRQAD+F+DL L++EI R P Sbjct: 119 GDGNFTTLVAALQRNGRKVTVVSTLSTQPPMIADELRRQADHFIDLIALRSEIDRHP 175 >gi|254701438|ref|ZP_05163266.1| hypothetical protein Bsuib55_11349 [Brucella suis bv. 5 str. 513] gi|261751977|ref|ZP_05995686.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513] gi|261741730|gb|EEY29656.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513] Length = 191 Score = 239 bits (611), Expect = 8e-62, Method: Compositional matrix adjust. Identities = 112/179 (62%), Positives = 145/179 (81%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFD REKIALFI+GANLY +SK LGFDIDYRKLLKAF+ R ++RAYYYT +V D Q++ Sbjct: 1 MFDSREKIALFINGANLYTASKTLGFDIDYRKLLKAFQKRGYLLRAYYYTALVED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K AKEFT++ GR++VK +MD+EL VDA + ++ ++H VIFS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKAAKEFTDSTGRRKVKGNMDLELTVDAMQLTDTVDHFVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F +LV ALQRK +KV++VST+ + P+M SD+LRRQAD+F+DL LK EI RDP E Sbjct: 119 GDGDFRSLVEALQRKGRKVSVVSTLTTQPAMISDELRRQADHFIDLVSLKAEIGRDPSE 177 >gi|225627151|ref|ZP_03785189.1| Hypothetical protein, conserved [Brucella ceti str. Cudo] gi|254707641|ref|ZP_05169469.1| hypothetical protein BpinM_11896 [Brucella pinnipedialis M163/99/10] gi|254709777|ref|ZP_05171588.1| hypothetical protein BpinB_05796 [Brucella pinnipedialis B2/94] gi|256031267|ref|ZP_05444881.1| hypothetical protein BpinM2_11548 [Brucella pinnipedialis M292/94/1] gi|260168403|ref|ZP_05755214.1| hypothetical protein BruF5_08553 [Brucella sp. F5/99] gi|261315135|ref|ZP_05954332.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10] gi|261317309|ref|ZP_05956506.1| conserved hypothetical protein [Brucella pinnipedialis B2/94] gi|261757864|ref|ZP_06001573.1| conserved hypothetical protein [Brucella sp. F5/99] gi|265988348|ref|ZP_06100905.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1] gi|225617986|gb|EEH15030.1| Hypothetical protein, conserved [Brucella ceti str. Cudo] gi|261296532|gb|EEY00029.1| conserved hypothetical protein [Brucella pinnipedialis B2/94] gi|261304161|gb|EEY07658.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10] gi|261737848|gb|EEY25844.1| conserved hypothetical protein [Brucella sp. F5/99] gi|264660545|gb|EEZ30806.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1] Length = 191 Score = 239 bits (611), Expect = 9e-62, Method: Compositional matrix adjust. Identities = 113/179 (63%), Positives = 145/179 (81%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFD REKIALFIDGANLYA+SK LGFDIDYRKLLKAF+ R ++RAYYYT +V D Q++ Sbjct: 1 MFDSREKIALFIDGANLYAASKTLGFDIDYRKLLKAFQKRGYLLRAYYYTALVED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++V K AKEFT++ GR++VK +MD+EL VDA + ++ ++H VIFS Sbjct: 59 SSIRPLIDWLDYNGYKVGTKAAKEFTDSTGRRKVKGNMDIELTVDAKQLTDTVDHFVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F +LV ALQRK +KV++VST+ + P+M SD+LRRQAD+F+DL LK EI RDP E Sbjct: 119 GDGDFRSLVEALQRKGRKVSVVSTLTTQPAMISDELRRQADHFIDLVSLKAEIGRDPSE 177 >gi|110633298|ref|YP_673506.1| hypothetical protein Meso_0944 [Mesorhizobium sp. BNC1] gi|110284282|gb|ABG62341.1| protein of unknown function DUF88 [Chelativorans sp. BNC1] Length = 194 Score = 239 bits (610), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 111/179 (62%), Positives = 146/179 (81%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFDPREKIA+FIDGANLYA+S++LGFDIDYRKLL +F+ RA ++RAYYYT +V D Q++ Sbjct: 1 MFDPREKIAMFIDGANLYATSRSLGFDIDYRKLLASFQKRAYLLRAYYYTALVED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+EL +DA + ++H VIFS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPAKEFTDSTGRRKIKGNMDIELTIDALGLVDVVDHYVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F TLV ALQR+ +KV+IVST+ S P M SD+LRRQAD+F+DLA L+ E+ RDP E Sbjct: 119 GDGDFRTLVEALQRRGRKVSIVSTIQSQPPMISDELRRQADHFIDLATLQTEVGRDPSE 177 >gi|17987581|ref|NP_540215.1| putative cytoplasmic protein [Brucella melitensis bv. 1 str. 16M] gi|225852170|ref|YP_002732403.1| hypothetical protein BMEA_A0686 [Brucella melitensis ATCC 23457] gi|256044347|ref|ZP_05447251.1| hypothetical protein Bmelb1R_07603 [Brucella melitensis bv. 1 str. Rev.1] gi|256113190|ref|ZP_05454058.1| hypothetical protein Bmelb3E_10777 [Brucella melitensis bv. 3 str. Ether] gi|256264318|ref|ZP_05466850.1| conserved hypothetical protein [Brucella melitensis bv. 2 str. 63/9] gi|260563699|ref|ZP_05834185.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M] gi|265990761|ref|ZP_06103318.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. Rev.1] gi|265994597|ref|ZP_06107154.1| conserved hypothetical protein [Brucella melitensis bv. 3 str. Ether] gi|17983287|gb|AAL52479.1| hypothetical cytosolic protein [Brucella melitensis bv. 1 str. 16M] gi|225640535|gb|ACO00449.1| Hypothetical protein, conserved [Brucella melitensis ATCC 23457] gi|260153715|gb|EEW88807.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M] gi|262765710|gb|EEZ11499.1| conserved hypothetical protein [Brucella melitensis bv. 3 str. Ether] gi|263001545|gb|EEZ14120.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. Rev.1] gi|263094592|gb|EEZ18390.1| conserved hypothetical protein [Brucella melitensis bv. 2 str. 63/9] gi|326408671|gb|ADZ65736.1| putative cytoplasmic protein [Brucella melitensis M28] gi|326538396|gb|ADZ86611.1| conserved hypothetical protein [Brucella melitensis M5-90] Length = 191 Score = 239 bits (609), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 112/179 (62%), Positives = 145/179 (81%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFD REKIALFIDGANLYA+SK LGFDIDYRKLLKAF+ R ++RAYYYT +V D Q++ Sbjct: 1 MFDSREKIALFIDGANLYAASKTLGFDIDYRKLLKAFQKRGYLLRAYYYTALVED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K A+EFT++ GR++VK +MD+EL VDA + ++ ++H VIFS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKAAREFTDSTGRRKVKGNMDIELTVDAMQLTDTVDHFVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 G G F +LV ALQRK +KV++VST+ + P+M SD+LRRQAD+F+DL LK EI RDP E Sbjct: 119 GYGDFRSLVEALQRKGRKVSVVSTLTTQPAMISDELRRQADHFIDLVSLKAEIGRDPSE 177 >gi|256159377|ref|ZP_05457159.1| hypothetical protein BcetM4_10523 [Brucella ceti M490/95/1] gi|256254675|ref|ZP_05460211.1| hypothetical protein BcetB_10340 [Brucella ceti B1/94] gi|261221851|ref|ZP_05936132.1| conserved hypothetical protein [Brucella ceti B1/94] gi|265997815|ref|ZP_06110372.1| conserved hypothetical protein [Brucella ceti M490/95/1] gi|260920435|gb|EEX87088.1| conserved hypothetical protein [Brucella ceti B1/94] gi|262552283|gb|EEZ08273.1| conserved hypothetical protein [Brucella ceti M490/95/1] Length = 191 Score = 238 bits (606), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 112/179 (62%), Positives = 144/179 (80%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFD REKIALFIDGANLYA+SK LGFDIDYRKLLKAF+ R ++RAYYYT +V D Q++ Sbjct: 1 MFDSREKIALFIDGANLYAASKTLGFDIDYRKLLKAFQKRGYLLRAYYYTALVED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + P +DWL YNG++V K AKEFT++ GR++VK +MD+EL VDA + ++ ++H VIFS Sbjct: 59 SSIRPFIDWLDYNGYKVGTKAAKEFTDSTGRRKVKGNMDIELTVDAKQLTDTVDHFVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F +LV ALQRK +KV++VST+ + P+M SD+LRRQAD+F+DL LK EI RDP E Sbjct: 119 GDGDFRSLVEALQRKGRKVSVVSTLTTQPAMISDELRRQADHFIDLVSLKAEIGRDPSE 177 >gi|294852014|ref|ZP_06792687.1| hypothetical protein BAZG_00929 [Brucella sp. NVSL 07-0026] gi|294820603|gb|EFG37602.1| hypothetical protein BAZG_00929 [Brucella sp. NVSL 07-0026] Length = 191 Score = 238 bits (606), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 112/179 (62%), Positives = 144/179 (80%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF REKIALFID ANLYA+SK LGFDIDYRKLLKAF+ R ++RAYYYT +V D Q++ Sbjct: 1 MFGSREKIALFIDDANLYAASKTLGFDIDYRKLLKAFQKRGYLLRAYYYTALVED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K AKEFT++ GR++VK +MD+EL VDA + ++ ++H VIFS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKAAKEFTDSTGRRKVKGNMDIELTVDAMQLTDTVDHFVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F +LV ALQRK +KV++VST+ + P+M SD+LRRQAD+F+DL LK EI RDP E Sbjct: 119 GDGDFRSLVEALQRKGRKVSVVSTLTTQPAMISDELRRQADHFIDLVSLKAEIGRDPSE 177 >gi|90420856|ref|ZP_01228761.1| conserved hypothetical protein [Aurantimonas manganoxydans SI85-9A1] gi|90334831|gb|EAS48603.1| conserved hypothetical protein [Aurantimonas manganoxydans SI85-9A1] Length = 201 Score = 234 bits (596), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 110/177 (62%), Positives = 143/177 (80%), Gaps = 2/177 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFD REKIALFIDGANLYA+S+ LGFDIDY+K+L++F +R ++RAYYYT +V D E + Sbjct: 1 MFDQREKIALFIDGANLYAASRGLGFDIDYKKMLRSFEARGYLLRAYYYTALVEDNE--Y 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K A+EFT+ GR+R+K +MD+ELAVDA E + ++H V+FS Sbjct: 59 SSIRPLIDWLDYNGYRVVTKPAREFTDASGRRRIKGNMDIELAVDAMELVDTVDHFVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 GDG F +LVAALQRK +KV++VST+ S P M SD LRRQAD+F++LA LK EI RDP Sbjct: 119 GDGDFRSLVAALQRKGRKVSVVSTLTSSPPMISDDLRRQADHFIELANLKAEIGRDP 175 >gi|254504996|ref|ZP_05117147.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11] gi|222441067|gb|EEE47746.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11] Length = 196 Score = 231 bits (588), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 105/179 (58%), Positives = 145/179 (81%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFD REK+ALFIDGANLY+++KA+GFDIDY++LLK F+ +A ++RAYYYT ++ D Q++ Sbjct: 1 MFDAREKVALFIDGANLYSTAKAIGFDIDYKRLLKEFQGQAYLLRAYYYTALIED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++V+ K KEF ++ GR++VK +MD+ELAVDA E E ++H+V+FS Sbjct: 59 SSIRPLIDWLDYNGYKVITKPVKEFVDSAGRRKVKGNMDIELAVDAMELVESVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F +LV ALQRK +KV++VST+ + P M +D LRRQAD+F+DLA L N+I RDP E Sbjct: 119 GDGDFRSLVEALQRKGRKVSVVSTLKTQPPMIADDLRRQADHFIDLASLANKIGRDPSE 177 >gi|307946592|ref|ZP_07661927.1| RtsE [Roseibium sp. TrichSKD4] gi|307770256|gb|EFO29482.1| RtsE [Roseibium sp. TrichSKD4] Length = 194 Score = 231 bits (588), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 104/179 (58%), Positives = 146/179 (81%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFD REK+ALFIDGANLY+++KA+GFDIDY++LLK F+ +A ++RAYYYT ++ D Q++ Sbjct: 1 MFDAREKVALFIDGANLYSTAKAIGFDIDYKRLLKEFQGQAYLLRAYYYTALIED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++V+ K KEF ++ GR++VK +MD+ELAVDA +Q E ++H+V+FS Sbjct: 59 SSIRPLIDWLDYNGYKVITKPVKEFVDSTGRRKVKGNMDIELAVDAMQQVEHVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F +LV ALQR+ +KV++VST+ + P M +D LRRQAD+F+DLA L N+I RDP E Sbjct: 119 GDGDFRSLVEALQRRGRKVSVVSTLKTQPPMIADDLRRQADHFIDLASLANKIGRDPSE 177 >gi|114706254|ref|ZP_01439156.1| hypothetical protein FP2506_00680 [Fulvimarina pelagi HTCC2506] gi|114538115|gb|EAU41237.1| hypothetical protein FP2506_00680 [Fulvimarina pelagi HTCC2506] Length = 199 Score = 229 bits (583), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 108/179 (60%), Positives = 141/179 (78%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFD REKIALFIDGANLYA+S+ LGFDIDY+K+L F +A ++RAYYYT ++ D Q++ Sbjct: 1 MFDQREKIALFIDGANLYAASRNLGFDIDYKKMLTFFEKKAYLLRAYYYTALIED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K AKEFT+ GR++VK +MD+ELA+DA E S+ ++H V+FS Sbjct: 59 SSIRPLIDWLDYNGYRVVTKPAKEFTDQTGRRKVKGNMDIELAIDAMELSDTVDHFVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F +LV ALQRK +KV++VST+ + P M SD LRRQAD+F+DL LKNEI R E Sbjct: 119 GDGDFRSLVDALQRKGRKVSVVSTLATQPPMISDDLRRQADHFIDLTSLKNEIGRSQAE 177 >gi|254469949|ref|ZP_05083354.1| DUF88 [Pseudovibrio sp. JE062] gi|211961784|gb|EEA96979.1| DUF88 [Pseudovibrio sp. JE062] Length = 194 Score = 226 bits (575), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 101/179 (56%), Positives = 145/179 (81%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFDPREKIALFIDGANLY+++KA+GFDIDY++LLK F+S+ ++RAYYYT +V EQ++ Sbjct: 1 MFDPREKIALFIDGANLYSTAKAIGFDIDYKRLLKEFQSKGYLLRAYYYTALV--EEQEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K KEF ++ GR+++K +MD+ELAVDA + + ++H+V+FS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPVKEFVDSAGRRKIKGNMDIELAVDAMQLIDHVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F +LV ALQR+ +KV++VST+ + P M +D LRRQAD+F++L+ L + RDP+E Sbjct: 119 GDGDFRSLVEALQRRGRKVSVVSTLQTQPPMIADDLRRQADHFIELSTLMQRVGRDPNE 177 >gi|304392073|ref|ZP_07374015.1| hypothetical protein R2A130_0742 [Ahrensia sp. R2A130] gi|303296302|gb|EFL90660.1| hypothetical protein R2A130_0742 [Ahrensia sp. R2A130] Length = 199 Score = 224 bits (570), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 105/175 (60%), Positives = 139/175 (79%), Gaps = 2/175 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFD REKIAL IDGANLYA+S+ALGFDIDYR++L AF+ R V+RAYYYT +V D Q++ Sbjct: 1 MFDEREKIALMIDGANLYATSRALGFDIDYRQMLVAFQKRGYVLRAYYYTALVED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++V+ K AKEFT+ GR++VK +MD+ELAVDA + ++ ++H V+FS Sbjct: 59 SAIRPLIDWLDYNGYRVITKPAKEFTDASGRRKVKGNMDIELAVDALDLADTVDHFVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 GDG F LV +LQRK ++VT+VST S P M +D+LRRQAD F+DL L++EI R Sbjct: 119 GDGDFRALVESLQRKGRRVTVVSTTSSQPPMIADELRRQADVFIDLKSLQDEIGR 173 >gi|158422876|ref|YP_001524168.1| hypothetical protein AZC_1252 [Azorhizobium caulinodans ORS 571] gi|158329765|dbj|BAF87250.1| uncharacterized conserved protein [Azorhizobium caulinodans ORS 571] Length = 201 Score = 222 bits (565), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 104/174 (59%), Positives = 141/174 (81%), Gaps = 2/174 (1%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 EKIALFIDGANLY+++KALGFDIDY++LLK F+SR ++RA+YYTT+V D Q++S + P Sbjct: 5 EKIALFIDGANLYSATKALGFDIDYKRLLKEFQSRGYLLRAFYYTTLVED--QEYSSIRP 62 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125 LLDWL YNG+ VV K+A+EFT++ GR+RV+ +MD+E+AVDA E + L+H+V+FSGDG F Sbjct: 63 LLDWLDYNGYSVVTKLAREFTDSQGRRRVRGNMDIEIAVDAMELAGSLDHIVLFSGDGDF 122 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 +LV ALQRK +V++VST+ + P + SD LRRQAD F+DL L+ +I RDP E Sbjct: 123 RSLVEALQRKGVRVSVVSTISTQPPLISDDLRRQADVFIDLVDLQAKIGRDPAE 176 >gi|328543520|ref|YP_004303629.1| RtsE [polymorphum gilvum SL003B-26A1] gi|326413264|gb|ADZ70327.1| RtsE [Polymorphum gilvum SL003B-26A1] Length = 195 Score = 220 bits (561), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 100/177 (56%), Positives = 140/177 (79%), Gaps = 2/177 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFD REKIALFIDGANLY+++KA+GFDIDY+ LLK F+ + ++RAYYYT ++ D Q++ Sbjct: 1 MFDSREKIALFIDGANLYSTAKAIGFDIDYKMLLKEFQGKGYLLRAYYYTAIIED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++V+ K KEF + GR++VK +MD+ELAVDA + + ++H+V+FS Sbjct: 59 SSIRPLIDWLDYNGYKVITKPVKEFVDASGRRKVKGNMDIELAVDAMQIVDHVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 GDG F +LV ALQRK +KV++VST+ + P M +D LRRQAD+F+DLA L ++ RDP Sbjct: 119 GDGDFRSLVEALQRKGRKVSVVSTLQTQPPMIADDLRRQADHFIDLATLAAKVGRDP 175 >gi|154247759|ref|YP_001418717.1| hypothetical protein Xaut_3836 [Xanthobacter autotrophicus Py2] gi|154161844|gb|ABS69060.1| protein of unknown function DUF88 [Xanthobacter autotrophicus Py2] Length = 202 Score = 218 bits (556), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 101/174 (58%), Positives = 141/174 (81%), Gaps = 2/174 (1%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 EKIAL IDGANLY+++KALGFDIDY++LLK F+SR ++RA+YYTT++ D Q++S + P Sbjct: 5 EKIALLIDGANLYSATKALGFDIDYKRLLKEFQSRGYLLRAFYYTTLIED--QEYSSIRP 62 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125 LLDWL YNG+ VV K+A+EFT++ GR+RV+ +MD+E+AVDA E +E ++H+V+FSGDG F Sbjct: 63 LLDWLDYNGYAVVTKLAREFTDSQGRRRVRGNMDIEIAVDAMELAEHVDHIVLFSGDGDF 122 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 +LV ALQRK +V++VST+ + P + +D LRRQAD F+DL L+ +I RDP E Sbjct: 123 RSLVEALQRKGVRVSVVSTISTQPPLIADDLRRQADVFIDLVDLQPKIGRDPSE 176 >gi|296444871|ref|ZP_06886833.1| protein of unknown function DUF88 [Methylosinus trichosporium OB3b] gi|296257539|gb|EFH04604.1| protein of unknown function DUF88 [Methylosinus trichosporium OB3b] Length = 202 Score = 218 bits (555), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 101/179 (56%), Positives = 142/179 (79%), Gaps = 3/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M DP E+IALFIDGANLYA++K+LGFDIDY++LL+ F+SR +IRA+YYT ++ D Q++ Sbjct: 1 MADP-ERIALFIDGANLYATAKSLGFDIDYKRLLREFQSRGRLIRAFYYTALIED--QEY 57 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG+ VV K KEF ++ GR++VK +MD+ELAVDA E +E ++HLV+FS Sbjct: 58 SSIRPLIDWLDYNGYAVVTKPTKEFVDSLGRRKVKGNMDIELAVDAMEMAEHIDHLVLFS 117 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F +LV A+QRK +V+++ST+ + P M +D+LRRQ+D F+DL +L +I RDP E Sbjct: 118 GDGDFRSLVEAVQRKGVRVSVISTITTQPPMIADELRRQSDEFVDLIHLVGKIGRDPGE 176 >gi|299135108|ref|ZP_07028299.1| protein of unknown function DUF88 [Afipia sp. 1NLS2] gi|298590085|gb|EFI50289.1| protein of unknown function DUF88 [Afipia sp. 1NLS2] Length = 212 Score = 218 bits (555), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 99/179 (55%), Positives = 137/179 (76%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M P KIALFIDGANLYA++K LGFDIDY++LL F++R ++RA+YYT ++ D Q++ Sbjct: 1 MTSPSHKIALFIDGANLYATAKTLGFDIDYKRLLLEFQNRGTLVRAFYYTAIIED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++H+V+FS Sbjct: 59 SSIRPLIDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHIDHMVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F +LV A+QR+ +VT+VST+ S P M +D+LRRQAD F DL L++++ RDP E Sbjct: 119 GDGDFRSLVEAVQRRGVRVTVVSTISSQPPMIADELRRQADVFTDLVQLQSKLGRDPGE 177 >gi|154253305|ref|YP_001414129.1| hypothetical protein Plav_2865 [Parvibaculum lavamentivorans DS-1] gi|154157255|gb|ABS64472.1| protein of unknown function DUF88 [Parvibaculum lavamentivorans DS-1] Length = 206 Score = 218 bits (555), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 99/175 (56%), Positives = 140/175 (80%), Gaps = 2/175 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 +F P E+IALFIDGANLY++++ LGFDIDY++LL FRS+ +++RA+YYT ++ D Q++ Sbjct: 2 IFYPNERIALFIDGANLYSAARGLGFDIDYKRLLDHFRSKGVLVRAFYYTALLED--QEY 59 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SPL PL+DWL YNG+ VV K AKEFT+ GR+R+K +MD+ELA+DA E ++ L+HLV+FS Sbjct: 60 SPLRPLIDWLDYNGYAVVTKPAKEFTDATGRRRIKGNMDIELAIDALEIADKLDHLVLFS 119 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 GDG F LV A+QRK K+VT+VST+ S P M +D+LRRQAD +++L +++ I R Sbjct: 120 GDGDFRRLVDAVQRKGKRVTVVSTMRSQPPMIADELRRQADQYVELESMRDAIGR 174 >gi|27380178|ref|NP_771707.1| hypothetical protein blr5067 [Bradyrhizobium japonicum USDA 110] gi|27353332|dbj|BAC50332.1| blr5067 [Bradyrhizobium japonicum USDA 110] Length = 214 Score = 217 bits (552), Expect = 6e-55, Method: Compositional matrix adjust. Identities = 99/176 (56%), Positives = 136/176 (77%), Gaps = 2/176 (1%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 P KIALFIDGANLYA++K LGFDIDY++LLK F+SR ++RA+YYT ++ D Q++S + Sbjct: 5 PTNKIALFIDGANLYATAKTLGFDIDYKRLLKEFQSRGTLLRAFYYTAIIED--QEYSSI 62 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 PL+DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++ +V+FSGDG Sbjct: 63 RPLIDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHIDQMVLFSGDG 122 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 F +LV A+QR+ +VT+VST+ S P M +D+LRRQAD F DL L++++ RDP E Sbjct: 123 DFRSLVEAVQRRGVRVTVVSTIASQPPMIADELRRQADVFTDLVELQSKLGRDPSE 178 >gi|163852608|ref|YP_001640651.1| hypothetical protein Mext_3193 [Methylobacterium extorquens PA1] gi|218531449|ref|YP_002422265.1| hypothetical protein Mchl_3517 [Methylobacterium chloromethanicum CM4] gi|254562365|ref|YP_003069460.1| hypothetical protein METDI3980 [Methylobacterium extorquens DM4] gi|163664213|gb|ABY31580.1| protein of unknown function DUF88 [Methylobacterium extorquens PA1] gi|218523752|gb|ACK84337.1| protein of unknown function DUF88 [Methylobacterium chloromethanicum CM4] gi|254269643|emb|CAX25615.1| conserved hypothethical protein (DUF88) [Methylobacterium extorquens DM4] Length = 218 Score = 215 bits (547), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 96/175 (54%), Positives = 141/175 (80%), Gaps = 2/175 (1%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 +++ A+FIDGANLYA++KALGFDIDY++LLK F+SR +IRA+YYT ++ D Q++S + Sbjct: 4 KQRTAVFIDGANLYATTKALGFDIDYKRLLKDFQSRDNLIRAFYYTAMIED--QEYSSIR 61 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 PL+DWL YNG++VV K KEFT++ GR+++K +MD+ELA+DA E + ++H+V+FSGDG Sbjct: 62 PLIDWLDYNGYRVVTKPVKEFTDSAGRRKIKGNMDIELAIDALELAPHIDHMVLFSGDGD 121 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 F +LV A+QR+ +V++VST+ + P+M +D LRRQAD F+DLA+L + I RDP E Sbjct: 122 FRSLVEAIQRRGVRVSVVSTIQTQPAMIADDLRRQADEFIDLAHLASRIGRDPSE 176 >gi|217977184|ref|YP_002361331.1| protein of unknown function DUF88 [Methylocella silvestris BL2] gi|217502560|gb|ACK49969.1| protein of unknown function DUF88 [Methylocella silvestris BL2] Length = 205 Score = 215 bits (547), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 99/172 (57%), Positives = 139/172 (80%), Gaps = 2/172 (1%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 +E+IALFIDGANLYA++K+LGFDIDY++LLK F+SR +IRA+YYT +V D Q++S + Sbjct: 4 QERIALFIDGANLYATAKSLGFDIDYKRLLKEFQSRGKLIRAFYYTALVED--QEYSSIR 61 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 PL+DWL YNG+ VV K KEF ++ GR++VK +MD+ELAVDA E +E L+H+V+FSGDG Sbjct: 62 PLVDWLDYNGYSVVTKPTKEFVDSLGRRKVKGNMDIELAVDAMEMAEHLDHIVLFSGDGD 121 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 F +LV A+QRK +V++VST + P+M +D+LRRQAD F+D+ +L ++I RD Sbjct: 122 FRSLVEAIQRKGVRVSVVSTNATQPAMVADELRRQADEFIDIIHLASKIGRD 173 >gi|323137551|ref|ZP_08072628.1| protein of unknown function DUF88 [Methylocystis sp. ATCC 49242] gi|322397177|gb|EFX99701.1| protein of unknown function DUF88 [Methylocystis sp. ATCC 49242] Length = 203 Score = 214 bits (546), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 96/174 (55%), Positives = 139/174 (79%), Gaps = 2/174 (1%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 E+IALFIDGANLYA++K+LGFDIDY++LL+ F+ + +IRA+YYT ++ D Q++S + P Sbjct: 5 ERIALFIDGANLYATAKSLGFDIDYKRLLREFQGKGRLIRAFYYTALIED--QEYSSIRP 62 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125 L+DWL YNG+ VV K KEF ++ GR++VK +MD+ELAVDA E +E ++H+V+FSGDG F Sbjct: 63 LIDWLDYNGYAVVTKPTKEFVDSLGRRKVKGNMDIELAVDAMEMAEHIDHMVLFSGDGDF 122 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 +LV A+QRK +V+++ST+ + P M +D+LRRQAD F+DL +L ++I RDP E Sbjct: 123 RSLVEAVQRKGVRVSVISTITTQPPMIADELRRQADEFIDLIHLVSKIGRDPGE 176 >gi|118587968|ref|ZP_01545378.1| hypothetical protein SIAM614_10343 [Stappia aggregata IAM 12614] gi|118439590|gb|EAV46221.1| hypothetical protein SIAM614_10343 [Stappia aggregata IAM 12614] Length = 188 Score = 214 bits (546), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 97/170 (57%), Positives = 137/170 (80%), Gaps = 2/170 (1%) Query: 10 LFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDW 69 +FIDGANLY+++KA+GFDIDY++LLK F+ +A ++RAYYYT ++ D Q++S + PL+DW Sbjct: 1 MFIDGANLYSTAKAIGFDIDYKRLLKEFQGQAYLLRAYYYTALIED--QEYSSIRPLIDW 58 Query: 70 LHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLV 129 L YNG++V+ K KEF ++ GR++VK +MD+ELAVDA E E ++H+V+FSGDG F +LV Sbjct: 59 LDYNGYKVITKPVKEFVDSAGRRKVKGNMDIELAVDAMELVESVDHVVLFSGDGDFRSLV 118 Query: 130 AALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 ALQRK +KV++VST+ + P M +D LRRQAD+F+DLA L N+I RDP E Sbjct: 119 EALQRKGRKVSVVSTLKTQPPMIADDLRRQADHFIDLASLANKIGRDPSE 168 >gi|188582630|ref|YP_001926075.1| hypothetical protein Mpop_3389 [Methylobacterium populi BJ001] gi|179346128|gb|ACB81540.1| protein of unknown function DUF88 [Methylobacterium populi BJ001] Length = 217 Score = 214 bits (546), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 97/175 (55%), Positives = 140/175 (80%), Gaps = 2/175 (1%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 +++ A+FIDGANLYA++KALGFDIDY++LLK F+SR +IRA+YYT ++ D Q++S + Sbjct: 4 KQRTAVFIDGANLYATTKALGFDIDYKRLLKDFQSRDNLIRAFYYTAMIED--QEYSSIR 61 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 PL+DWL YNG++VV K KEFT++ GR++VK +MD+ELA+DA E + ++H+V+FSGDG Sbjct: 62 PLIDWLDYNGYRVVTKPVKEFTDSAGRRKVKGNMDIELAIDALELAPYIDHMVLFSGDGD 121 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 F +LV A+QR+ +V++VST+ + P+M +D LRRQAD F+DLA+L I RDP E Sbjct: 122 FRSLVEAIQRRGVRVSVVSTIQTQPAMIADDLRRQADEFIDLAHLAGRIGRDPSE 176 >gi|298291613|ref|YP_003693552.1| hypothetical protein Snov_1628 [Starkeya novella DSM 506] gi|296928124|gb|ADH88933.1| protein of unknown function DUF88 [Starkeya novella DSM 506] Length = 203 Score = 214 bits (546), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 99/172 (57%), Positives = 137/172 (79%), Gaps = 2/172 (1%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 EKIALFIDGANLY+++K+LGFDIDY++LLK F+ R V+RA+YYTT+V D E +S + P Sbjct: 2 EKIALFIDGANLYSATKSLGFDIDYKRLLKEFQGRGYVLRAFYYTTLVEDSE--YSSIRP 59 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125 LLDWL YNG+ VV K A+EFT++ GR+RV+ +MD+ELAV+A E + ++H+V+FSGDG F Sbjct: 60 LLDWLDYNGYSVVTKPAREFTDSQGRRRVRGNMDIELAVNAMELAGHVDHIVLFSGDGDF 119 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 +LV A+QRK +VT+VS++ + P M +D+LRRQAD F+DL L+ + RDP Sbjct: 120 RSLVEAIQRKGVRVTVVSSIHTQPPMIADELRRQADVFLDLVDLQGRVGRDP 171 >gi|146341383|ref|YP_001206431.1| hypothetical protein BRADO4470 [Bradyrhizobium sp. ORS278] gi|146194189|emb|CAL78210.1| conserved hypothetical protein with DNA-binding domain (DUF88) [Bradyrhizobium sp. ORS278] Length = 216 Score = 214 bits (546), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 97/173 (56%), Positives = 135/173 (78%), Gaps = 2/173 (1%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 KIALFIDGANLYA++K LGFDIDY++LLK F+SR ++RA+YYT ++ D Q++S + PL Sbjct: 7 KIALFIDGANLYATAKTLGFDIDYKRLLKEFQSRGTLLRAFYYTAIIED--QEYSSIRPL 64 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126 +DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++ +V+FSGDG F Sbjct: 65 IDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHIDQMVLFSGDGDFR 124 Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 +LV A+QR+ +VT++ST+ S P M +D+LRRQAD F DL L++++ RDP E Sbjct: 125 SLVEAMQRRGVRVTVISTISSQPPMIADELRRQADVFTDLVELQSKLGRDPSE 177 >gi|170748311|ref|YP_001754571.1| hypothetical protein Mrad2831_1893 [Methylobacterium radiotolerans JCM 2831] gi|170654833|gb|ACB23888.1| protein of unknown function DUF88 [Methylobacterium radiotolerans JCM 2831] Length = 213 Score = 214 bits (546), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 97/174 (55%), Positives = 138/174 (79%), Gaps = 2/174 (1%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 ++ A+FIDGANLYA++KALGFDIDY+KLLK F+SR ++RA+YYT ++ D Q++S + P Sbjct: 5 QRSAIFIDGANLYATTKALGFDIDYKKLLKEFQSRENLLRAFYYTAMIED--QEYSSIRP 62 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125 L+DWL YNG++VV K KEFT++ GR++ K +MD+ELA+DA E S ++H+++FSGDG F Sbjct: 63 LIDWLDYNGYRVVTKPVKEFTDSMGRRKYKGNMDIELAIDALELSPHIDHMILFSGDGDF 122 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 +LV A+QR+ KVT++ST+ + P+M SD+LRRQAD F+DLA L I R+P E Sbjct: 123 RSLVEAMQRRGVKVTVISTIQTQPAMISDELRRQADEFVDLASLAGRIGREPGE 176 >gi|182679399|ref|YP_001833545.1| hypothetical protein Bind_2447 [Beijerinckia indica subsp. indica ATCC 9039] gi|182635282|gb|ACB96056.1| protein of unknown function DUF88 [Beijerinckia indica subsp. indica ATCC 9039] Length = 203 Score = 214 bits (546), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 99/174 (56%), Positives = 140/174 (80%), Gaps = 2/174 (1%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 E+IALFIDGANLYA++K+LGFDIDY++LLK F+S+ +IRA+YYT +V D Q++S + P Sbjct: 5 ERIALFIDGANLYATAKSLGFDIDYKRLLKEFQSKGKLIRAFYYTALVED--QEYSSIRP 62 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125 L+DWL YNG+ VV K KEF ++ GR++VK +MD+ELAVDA E +E L+H+V+FSGDG F Sbjct: 63 LIDWLDYNGYSVVTKPTKEFVDSLGRRKVKGNMDIELAVDAMEMAEHLDHIVLFSGDGDF 122 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 +LV A+QRK +V++VST + P+M +D+LRRQAD F+DL +L ++I R+ +E Sbjct: 123 RSLVEAVQRKGVRVSVVSTNTTQPAMVADELRRQADEFIDLIHLASKIGREQNE 176 >gi|90424132|ref|YP_532502.1| hypothetical protein RPC_2633 [Rhodopseudomonas palustris BisB18] gi|90106146|gb|ABD88183.1| protein of unknown function DUF88 [Rhodopseudomonas palustris BisB18] Length = 208 Score = 214 bits (545), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 97/173 (56%), Positives = 135/173 (78%), Gaps = 2/173 (1%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 KIALFIDGANLYA++K LGFDIDY++LLK F+SR ++RA+YYT ++ D Q++S + PL Sbjct: 7 KIALFIDGANLYATAKTLGFDIDYKRLLKEFQSRGTLVRAFYYTAIIED--QEYSSIRPL 64 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126 +DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++ +V+FSGDG F Sbjct: 65 IDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHIDQMVLFSGDGDFR 124 Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 +LV A+QR+ +VT++ST+ S P M +D+LRRQAD F DL L++++ RDP E Sbjct: 125 SLVEAVQRRGVRVTVISTISSQPPMIADELRRQADVFTDLVELQSKLGRDPAE 177 >gi|148256038|ref|YP_001240623.1| hypothetical protein BBta_4689 [Bradyrhizobium sp. BTAi1] gi|146408211|gb|ABQ36717.1| hypothetical protein BBta_4689 [Bradyrhizobium sp. BTAi1] Length = 217 Score = 214 bits (545), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 97/173 (56%), Positives = 135/173 (78%), Gaps = 2/173 (1%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 KIALFIDGANLYA++K LGFDIDY++LLK F+SR ++RA+YYT ++ D Q++S + PL Sbjct: 7 KIALFIDGANLYATAKTLGFDIDYKRLLKEFQSRGTLLRAFYYTAIIED--QEYSSIRPL 64 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126 +DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++ +V+FSGDG F Sbjct: 65 IDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHIDQMVLFSGDGDFR 124 Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 +LV A+QR+ +VT++ST+ S P M +D+LRRQAD F DL L++++ RDP E Sbjct: 125 SLVEAMQRRGVRVTVISTISSQPPMIADELRRQADVFTDLVELQSKLGRDPSE 177 >gi|312114934|ref|YP_004012530.1| hypothetical protein Rvan_2206 [Rhodomicrobium vannielii ATCC 17100] gi|311220063|gb|ADP71431.1| hypothetical protein Rvan_2206 [Rhodomicrobium vannielii ATCC 17100] Length = 210 Score = 214 bits (544), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 99/174 (56%), Positives = 136/174 (78%), Gaps = 2/174 (1%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 F E+IALFIDGANLYA++KALGFDIDY++LL FR++ +++RA YYT + EQ++S Sbjct: 3 FYTTERIALFIDGANLYATAKALGFDIDYKRLLNLFRNKGVLLRALYYTALA--EEQEYS 60 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 + PL+DWL YNG+ +V K KEFT+ GR+++K +MD+ELAVDA E SE L+H+++FSG Sbjct: 61 SIRPLIDWLDYNGYSMVTKPTKEFTDASGRRKIKGNMDIELAVDAMELSEHLDHIILFSG 120 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 DG F TLV ALQ K K+V++VST+ + P M +D+LRRQAD F+DLA L+ +I R Sbjct: 121 DGDFRTLVEALQHKGKRVSVVSTLTTQPPMVADELRRQADQFIDLADLQKDICR 174 >gi|91977116|ref|YP_569775.1| hypothetical protein RPD_2645 [Rhodopseudomonas palustris BisB5] gi|91683572|gb|ABE39874.1| protein of unknown function DUF88 [Rhodopseudomonas palustris BisB5] Length = 228 Score = 214 bits (544), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 98/171 (57%), Positives = 134/171 (78%), Gaps = 2/171 (1%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 KIALFIDGANLYA++K LGFDIDY++LLK F+SR +IRA+YYT ++ D Q++S + PL Sbjct: 27 KIALFIDGANLYATAKTLGFDIDYKRLLKEFQSRGTLIRAFYYTAIIED--QEYSSIRPL 84 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126 +DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++ +V+FSGDG F Sbjct: 85 IDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHIDQMVLFSGDGDFR 144 Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 +LV A+QR+ +VT++ST+ S P M +D+LRRQAD F DL L+++I RDP Sbjct: 145 SLVEAVQRRGVRVTVISTISSQPPMIADELRRQADTFTDLVELQSKIGRDP 195 >gi|86749724|ref|YP_486220.1| hypothetical protein RPB_2606 [Rhodopseudomonas palustris HaA2] gi|86572752|gb|ABD07309.1| Protein of unknown function DUF88 [Rhodopseudomonas palustris HaA2] Length = 209 Score = 214 bits (544), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 98/171 (57%), Positives = 133/171 (77%), Gaps = 2/171 (1%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 KIALFIDGANLYA++K LGFDIDY++LLK F SR +IRA+YYT ++ D Q++S + PL Sbjct: 8 KIALFIDGANLYATAKTLGFDIDYKRLLKEFHSRGTLIRAFYYTAIIED--QEYSSIRPL 65 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126 +DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++ +V+FSGDG F Sbjct: 66 IDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHIDQMVLFSGDGDFR 125 Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 +LV A+QR+ +VT++ST+ S P M +D+LRRQAD F DL L+++I RDP Sbjct: 126 SLVEAVQRRGVRVTVISTISSQPPMIADELRRQADVFTDLVELQSKIGRDP 176 >gi|85715063|ref|ZP_01046047.1| hypothetical protein NB311A_00725 [Nitrobacter sp. Nb-311A] gi|85697978|gb|EAQ35851.1| hypothetical protein NB311A_00725 [Nitrobacter sp. Nb-311A] Length = 205 Score = 214 bits (544), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 98/173 (56%), Positives = 134/173 (77%), Gaps = 2/173 (1%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 KIALFIDGANLYA++K LGFDIDY++LLK F+SR ++RA+YYT ++ D Q++S + PL Sbjct: 7 KIALFIDGANLYATAKTLGFDIDYKRLLKEFQSRGTLVRAFYYTAIIED--QEYSSIRPL 64 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126 +DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++ +V+FSGDG F Sbjct: 65 IDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHVDQIVLFSGDGDFR 124 Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 +LV A+QR+ +VT+VST+ S P M +D+LRRQAD F DL L+ ++ RDP E Sbjct: 125 SLVEAVQRRGVRVTVVSTIASQPPMIADELRRQADVFTDLVELQPKLGRDPSE 177 >gi|92117780|ref|YP_577509.1| hypothetical protein Nham_2257 [Nitrobacter hamburgensis X14] gi|91800674|gb|ABE63049.1| protein of unknown function DUF88 [Nitrobacter hamburgensis X14] Length = 206 Score = 213 bits (543), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 99/179 (55%), Positives = 135/179 (75%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M KIALFIDGANLYA++K LGFDIDY++LLK F+SR ++RA+YYT ++ D Q++ Sbjct: 1 MSSASNKIALFIDGANLYATAKTLGFDIDYKRLLKEFQSRGTLVRAFYYTAIIED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++ +V+FS Sbjct: 59 SSIRPLIDWLDYNGYTVVTKATKEFVDASGRRKVKGNMDIELAVDAMELAEHVDQIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F +LV A+QR+ +VT+VST+ S P M +D+LRRQAD F DL L+ ++ RDP E Sbjct: 119 GDGDFRSLVEAVQRRGVRVTVVSTISSQPPMIADELRRQADVFTDLVELQPKLGRDPSE 177 >gi|75676115|ref|YP_318536.1| hypothetical protein Nwi_1924 [Nitrobacter winogradskyi Nb-255] gi|74420985|gb|ABA05184.1| Protein of unknown function DUF88 [Nitrobacter winogradskyi Nb-255] Length = 205 Score = 213 bits (542), Expect = 8e-54, Method: Compositional matrix adjust. Identities = 98/173 (56%), Positives = 134/173 (77%), Gaps = 2/173 (1%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 KIALFIDGANLYA++K LGFDIDY++LLK F+SR ++RA+YYT ++ D Q++S + PL Sbjct: 7 KIALFIDGANLYATAKTLGFDIDYKRLLKEFQSRGTLVRAFYYTAIIED--QEYSSIRPL 64 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126 +DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++ +V+FSGDG F Sbjct: 65 IDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHVDQIVLFSGDGDFR 124 Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 +LV A+QR+ +VT+VST+ S P M +D+LRRQAD F DL L+ ++ RDP E Sbjct: 125 SLVEAVQRRGVRVTVVSTIASQPPMIADELRRQADVFTDLVELQPKLGRDPSE 177 >gi|115525034|ref|YP_781945.1| hypothetical protein RPE_3028 [Rhodopseudomonas palustris BisA53] gi|115518981|gb|ABJ06965.1| protein of unknown function DUF88 [Rhodopseudomonas palustris BisA53] Length = 209 Score = 213 bits (542), Expect = 8e-54, Method: Compositional matrix adjust. Identities = 97/173 (56%), Positives = 135/173 (78%), Gaps = 2/173 (1%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 KIALFIDGANLYA++K LGFDIDY++LLK F+SR ++RA+YYT ++ D Q++S + PL Sbjct: 6 KIALFIDGANLYATAKTLGFDIDYKRLLKEFQSRGTLVRAFYYTAIIED--QEYSSIRPL 63 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126 +DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++ +V+FSGDG F Sbjct: 64 IDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHVDQIVLFSGDGDFR 123 Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 +LV A+QR+ +VT++ST+ S P M +D+LRRQAD F DL L++++ RDP E Sbjct: 124 SLVEAVQRRGVRVTVISTISSQPPMIADELRRQADVFTDLVELQSKLGRDPAE 176 >gi|209884968|ref|YP_002288825.1| DUF88 [Oligotropha carboxidovorans OM5] gi|209873164|gb|ACI92960.1| DUF88 [Oligotropha carboxidovorans OM5] Length = 213 Score = 213 bits (542), Expect = 9e-54, Method: Compositional matrix adjust. Identities = 98/173 (56%), Positives = 134/173 (77%), Gaps = 2/173 (1%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 KIALFIDGANLYA++K LGFDIDY++LL F+SR ++RA+YYT ++ D Q++S + PL Sbjct: 8 KIALFIDGANLYATAKTLGFDIDYKRLLLEFQSRGSLVRAFYYTAIIED--QEYSSIRPL 65 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126 +DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++ +V+FSGDG F Sbjct: 66 IDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHIDQMVLFSGDGDFR 125 Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 +LV A+QR+ +VT+VST+ S P M +D+LRRQAD F DL L+++I RDP E Sbjct: 126 SLVEAVQRRGVRVTVVSTIASQPPMIADELRRQADVFTDLVQLQSKIGRDPGE 178 >gi|39935757|ref|NP_948033.1| hypothetical protein RPA2691 [Rhodopseudomonas palustris CGA009] gi|192291344|ref|YP_001991949.1| hypothetical protein Rpal_2966 [Rhodopseudomonas palustris TIE-1] gi|39649610|emb|CAE28132.1| DUF88 [Rhodopseudomonas palustris CGA009] gi|192285093|gb|ACF01474.1| protein of unknown function DUF88 [Rhodopseudomonas palustris TIE-1] Length = 216 Score = 213 bits (541), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 97/171 (56%), Positives = 134/171 (78%), Gaps = 2/171 (1%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 KIALFIDGANLYA++K LGFDIDY++LLK F+SR ++RA+YYT ++ D Q++S + PL Sbjct: 8 KIALFIDGANLYATAKTLGFDIDYKRLLKEFQSRGNLVRAFYYTAIIED--QEYSSIRPL 65 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126 +DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++ +V+FSGDG F Sbjct: 66 IDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHIDQMVLFSGDGDFR 125 Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 +LV A+QR+ +VT++ST+ S P M +D+LRRQAD F DL L+++I RDP Sbjct: 126 SLVEAVQRRGVRVTVISTISSQPPMIADELRRQADIFTDLVELQSKIGRDP 176 >gi|295690031|ref|YP_003593724.1| hypothetical protein Cseg_2656 [Caulobacter segnis ATCC 21756] gi|295431934|gb|ADG11106.1| protein of unknown function DUF88 [Caulobacter segnis ATCC 21756] Length = 198 Score = 212 bits (540), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 101/174 (58%), Positives = 132/174 (75%), Gaps = 2/174 (1%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 F P ++IALFIDGANLY+++KALGFDIDYRKLL F+ R ++IRAYYYT + + + +S Sbjct: 3 FYPTDRIALFIDGANLYSAAKALGFDIDYRKLLDEFKKRGVLIRAYYYTAIAENDD--YS 60 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 P+ PL+DWL YNGF +V K A+EFT++ GRKR + MD+E+AVD + +E +HLV+FSG Sbjct: 61 PIRPLVDWLDYNGFTLVTKPAREFTDSQGRKRWRGDMDIEIAVDMLQMAETADHLVLFSG 120 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 DG F LV A+QRK ++VT+VST+ S P M SD LRRQAD F+DLA L I R Sbjct: 121 DGDFRALVEAVQRKGRRVTVVSTMKSQPPMTSDDLRRQADNFVDLADLGGIIGR 174 >gi|16125797|ref|NP_420361.1| hypothetical protein CC_1550 [Caulobacter crescentus CB15] gi|221234556|ref|YP_002516992.1| cytosolic protein [Caulobacter crescentus NA1000] gi|13422935|gb|AAK23529.1| conserved hypothetical protein [Caulobacter crescentus CB15] gi|220963728|gb|ACL95084.1| hypothetical cytosolic protein [Caulobacter crescentus NA1000] Length = 198 Score = 212 bits (540), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 101/174 (58%), Positives = 133/174 (76%), Gaps = 2/174 (1%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 F P +++ALFIDGANLY+++KALGFDIDYRKLL F+ R ++IRAYYYT + + + +S Sbjct: 3 FYPTDRLALFIDGANLYSAAKALGFDIDYRKLLDEFKKRGVLIRAYYYTAIAENDD--YS 60 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 P+ PL+DWL YNGF +V K A+EFT++ GRKR + MD+E+AVD + +E +HLV+FSG Sbjct: 61 PIRPLVDWLDYNGFTLVTKPAREFTDSQGRKRWRGDMDIEIAVDMLQIAETADHLVLFSG 120 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 DG F LV A+QRK ++VT+VST+ S P M SD LRRQAD F+DLA L N I R Sbjct: 121 DGDFRALVEAVQRKGRRVTVVSTMKSQPPMTSDDLRRQADNFVDLADLGNIIGR 174 >gi|316934150|ref|YP_004109132.1| hypothetical protein Rpdx1_2816 [Rhodopseudomonas palustris DX-1] gi|315601864|gb|ADU44399.1| hypothetical protein Rpdx1_2816 [Rhodopseudomonas palustris DX-1] Length = 213 Score = 211 bits (538), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 96/171 (56%), Positives = 133/171 (77%), Gaps = 2/171 (1%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 KIALFIDGANLYA++K LGFDIDY++LLK F+ R ++RA+YYT ++ D Q++S + PL Sbjct: 8 KIALFIDGANLYATAKTLGFDIDYKRLLKEFQGRGNLVRAFYYTAIIED--QEYSSIRPL 65 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126 +DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++ +V+FSGDG F Sbjct: 66 IDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHIDQMVLFSGDGDFR 125 Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 +LV A+QR+ +VT++ST+ S P M +D+LRRQAD F DL L+++I RDP Sbjct: 126 SLVEAVQRRGVRVTVISTISSQPPMIADELRRQADIFTDLVELQSKIGRDP 176 >gi|170738400|ref|YP_001767055.1| hypothetical protein M446_0033 [Methylobacterium sp. 4-46] gi|168192674|gb|ACA14621.1| protein of unknown function DUF88 [Methylobacterium sp. 4-46] Length = 216 Score = 211 bits (538), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 98/171 (57%), Positives = 134/171 (78%), Gaps = 2/171 (1%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 ++ ALFIDGAN+YA++KALGFDIDYRKLL FRSR +IRA+YYT ++ D Q++S + P Sbjct: 4 QRSALFIDGANVYATTKALGFDIDYRKLLADFRSRENLIRAFYYTALIED--QEYSSIRP 61 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125 L+DWL YNG++VV K AKEFT++ GR+++K +MD+EL +DA E S ++H+V+FSGDG F Sbjct: 62 LIDWLDYNGYRVVTKPAKEFTDSTGRRKIKGNMDIELTIDALELSPYIDHMVLFSGDGDF 121 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 LVAA+QR+ +VT+VST+ + P M SD LRRQAD F+D+ +L I RD Sbjct: 122 KPLVAAMQRRGVRVTVVSTIQTQPPMVSDDLRRQADDFVDIVHLIPRIGRD 172 >gi|27377446|ref|NP_768975.1| hypothetical protein bll2335 [Bradyrhizobium japonicum USDA 110] gi|27350590|dbj|BAC47600.1| bll2335 [Bradyrhizobium japonicum USDA 110] Length = 203 Score = 211 bits (537), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 101/173 (58%), Positives = 137/173 (79%), Gaps = 3/173 (1%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 EKIALFIDG+NL+A+SKALGFDIDYR+LL F+SR ++RA+YYTT++ D Q++S + P Sbjct: 5 EKIALFIDGSNLHATSKALGFDIDYRRLLGEFQSRGALLRAFYYTTLIED--QEYSSIRP 62 Query: 66 LLDWLHYNGFQVVAKVAKEFTEN-CGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 L+DWL YNG+ VV K KEF + GR++VK SMDV+LAV+A E +E ++ +V+FSGDG Sbjct: 63 LIDWLDYNGYTVVTKFTKEFVDAITGRRKVKGSMDVDLAVNAMELAEHVDQIVLFSGDGN 122 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 F +LV ALQR+ +VT+VST+ + P+M +D LRRQAD F+DLA LK ++ RDP Sbjct: 123 FRSLVEALQRRGVRVTVVSTLCTQPAMVADDLRRQADVFIDLAELKPKVGRDP 175 >gi|197105347|ref|YP_002130724.1| hypothetical protein PHZ_c1884 [Phenylobacterium zucineum HLK1] gi|196478767|gb|ACG78295.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1] Length = 195 Score = 211 bits (536), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 100/174 (57%), Positives = 135/174 (77%), Gaps = 2/174 (1%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 F P +++ALFIDGANLY+++K LGFDIDYRKLL+ FR R++++RAYYYT +V + E +S Sbjct: 3 FYPTDRLALFIDGANLYSAAKNLGFDIDYRKLLEEFRKRSVLVRAYYYTALVENEE--YS 60 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 P+ PL+DWL YNG+++V K A+E+T++ GRKR + MDVE+AVD E + +HLV+FSG Sbjct: 61 PIRPLVDWLDYNGYRLVTKSAREYTDSQGRKRWRGDMDVEIAVDMLEMAAHADHLVLFSG 120 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 DG F LV A+QRK +VT+VST+ S P M SD+LRRQAD F+DLA L + I R Sbjct: 121 DGDFRALVEAVQRKGSRVTVVSTLKSQPPMVSDELRRQADSFVDLADLADIIGR 174 >gi|163793037|ref|ZP_02187013.1| hypothetical protein BAL199_24649 [alpha proteobacterium BAL199] gi|159181683|gb|EDP66195.1| hypothetical protein BAL199_24649 [alpha proteobacterium BAL199] Length = 218 Score = 211 bits (536), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 98/175 (56%), Positives = 137/175 (78%), Gaps = 2/175 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 +F P EK+ALFIDGANLY++++ALGFDIDY++LL F S+A +IRA+YYT ++ D Q++ Sbjct: 2 LFYPHEKVALFIDGANLYSAARALGFDIDYKRLLVLFGSKANLIRAFYYTALLED--QEY 59 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWL YNG+ +V K AKEFT++ GR+R+K +MD+ELAVD E + L+H+V+FS Sbjct: 60 SPIRPLVDWLDYNGYSLVTKPAKEFTDSQGRRRIKGNMDIELAVDMMEMVDRLDHVVLFS 119 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 GDG F +L+ A+QRK + T+VST+ S P M +D+LRRQAD F+DL L +I R Sbjct: 120 GDGDFRSLIEAVQRKGVRATVVSTIRSSPPMIADELRRQADQFIDLDQLAGDIER 174 >gi|300023756|ref|YP_003756367.1| hypothetical protein Hden_2248 [Hyphomicrobium denitrificans ATCC 51888] gi|299525577|gb|ADJ24046.1| protein of unknown function DUF88 [Hyphomicrobium denitrificans ATCC 51888] Length = 213 Score = 210 bits (534), Expect = 7e-53, Method: Compositional matrix adjust. Identities = 97/174 (55%), Positives = 136/174 (78%), Gaps = 2/174 (1%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 F P E+IALFIDGANLYA++K+LGFDIDY++LL FR + ++RA YYT + EQ++S Sbjct: 3 FYPTERIALFIDGANLYATAKSLGFDIDYKRLLGLFRQKGQLVRALYYTALA--EEQEYS 60 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 + PL+DWL YNGF +V K KEFT+ GR++VK +MD+EL VDA ++ L+H+VIFSG Sbjct: 61 SIRPLIDWLDYNGFSMVTKPTKEFTDATGRRKVKGNMDIELTVDAMLLADSLDHIVIFSG 120 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 DG F +LVAALQ+K K+V+++ST+ + P M +D+LRRQAD F+DLA L++++ R Sbjct: 121 DGDFRSLVAALQQKGKRVSVISTLQTQPPMVADELRRQADQFIDLADLEDQVGR 174 >gi|167645687|ref|YP_001683350.1| hypothetical protein Caul_1723 [Caulobacter sp. K31] gi|167348117|gb|ABZ70852.1| protein of unknown function DUF88 [Caulobacter sp. K31] Length = 207 Score = 209 bits (532), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 98/174 (56%), Positives = 133/174 (76%), Gaps = 2/174 (1%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 F P E++ALFIDGAN ++++K+LGFDIDYRKLL FR R +++RAYYYT + + +++S Sbjct: 3 FYPTERLALFIDGANFFSAAKSLGFDIDYRKLLDEFRKRGLLVRAYYYTAIAEN--EEYS 60 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 P+ PL+DWL YNGF +V K A+EFT++ GRKR + MD+E+AVD E + ++HLV+FSG Sbjct: 61 PIRPLVDWLDYNGFTLVTKPAREFTDSQGRKRWRGDMDIEIAVDMLEMAATVDHLVLFSG 120 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 DG F V A+QRK ++VT+VST+ S P MASD LRRQAD F+DLA L + I R Sbjct: 121 DGDFRAAVEAVQRKGRRVTVVSTMKSQPPMASDDLRRQADNFVDLADLGSIIGR 174 >gi|83593194|ref|YP_426946.1| hypothetical protein Rru_A1859 [Rhodospirillum rubrum ATCC 11170] gi|83576108|gb|ABC22659.1| Protein of unknown function DUF88 [Rhodospirillum rubrum ATCC 11170] Length = 214 Score = 209 bits (531), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 97/177 (54%), Positives = 137/177 (77%), Gaps = 2/177 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 +F P+E+I LFIDG+NLYA+++ALGFDIDY++LL+ F ++ +IRA+YYT +V D Q++ Sbjct: 2 IFYPQERIGLFIDGSNLYAAARALGFDIDYKRLLELFAAKGRLIRAFYYTALVED--QEY 59 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWL YNG+ +V K KEFT+ GR+++K +MD+ELA+D E + L+H+V+FS Sbjct: 60 SPIRPLVDWLDYNGYTMVTKPTKEFTDATGRRKIKGNMDIELAIDVMEMAPHLDHIVLFS 119 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 GDG F LV A+QRK +VT+VSTV S P M +D+LRRQAD F++L L+ IAR P Sbjct: 120 GDGDFRRLVDAVQRKGLRVTVVSTVRSQPPMVADELRRQADTFIELLDLEPSIARAP 176 >gi|307322655|ref|ZP_07601988.1| protein of unknown function DUF88 [Sinorhizobium meliloti AK83] gi|306891701|gb|EFN22554.1| protein of unknown function DUF88 [Sinorhizobium meliloti AK83] Length = 200 Score = 208 bits (530), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 97/179 (54%), Positives = 138/179 (77%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFD REKIALFIDG +L+++S++LGF+IDYR++L+AFR R ++R Y YT V+ D + Sbjct: 1 MFDSREKIALFIDGPSLFSASRSLGFEIDYRRVLEAFRRRGYLLRVYLYTAVIEDDAHK- 59 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 + +DWL YNG+QVV KVA +FT+ G++++K +M +ELA+DA EQ+ ++HLVI + Sbjct: 60 -SMRSWIDWLDYNGYQVVTKVAVKFTDFAGQQKIKGNMALELAIDAMEQASNVDHLVIVT 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GD F LV A+QRK +KV+IVST+LS P M +D LRRQAD+F+DLA L++EIAR+P + Sbjct: 119 GDSVFLALVEAIQRKGRKVSIVSTMLSRPPMVADDLRRQADHFIDLATLQHEIAREPSK 177 >gi|220920088|ref|YP_002495389.1| hypothetical protein Mnod_0035 [Methylobacterium nodulans ORS 2060] gi|219944694|gb|ACL55086.1| protein of unknown function DUF88 [Methylobacterium nodulans ORS 2060] Length = 219 Score = 208 bits (530), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 97/171 (56%), Positives = 134/171 (78%), Gaps = 2/171 (1%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 ++ ALFIDGAN+YA++KALGFDIDYRKLL F++R +IRA+YYT +V D Q++S + P Sbjct: 4 QRSALFIDGANVYATTKALGFDIDYRKLLADFKARENLIRAFYYTALVED--QEYSSIRP 61 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125 L+DWL YNG++VV K AKEFT++ GR++VK +MD+EL +DA E S ++H+V+FSGDG F Sbjct: 62 LIDWLDYNGYRVVTKPAKEFTDSSGRRKVKGNMDIELTIDALELSPYIDHMVLFSGDGDF 121 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 LVAA+QR+ +VT+VST+ + P M +D LRRQAD F+D+ +L I RD Sbjct: 122 KPLVAAMQRRGVRVTVVSTIQTQPPMVADDLRRQADDFVDIVHLIPRIGRD 172 >gi|315499955|ref|YP_004088758.1| hypothetical protein Astex_2970 [Asticcacaulis excentricus CB 48] gi|315417967|gb|ADU14607.1| hypothetical protein Astex_2970 [Asticcacaulis excentricus CB 48] Length = 189 Score = 207 bits (527), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 103/175 (58%), Positives = 131/175 (74%), Gaps = 4/175 (2%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVV-GDPEQQF 60 F P +KIALFIDGANLY+++KAL FDIDYRKLL FR R I++RAYYYT +V GD + Sbjct: 3 FYPTDKIALFIDGANLYSAAKALNFDIDYRKLLDEFRKRGILLRAYYYTALVEGD---DY 59 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWL YNGF ++ K AKE+T+ GRKR + MD+E+A D E +E +HLV+FS Sbjct: 60 SPIRPLVDWLDYNGFALITKTAKEYTDAQGRKRWRGDMDIEIACDMMEIAEHADHLVLFS 119 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 GDG F L+ A+QRK +VT+VSTV S P M SD+LRRQAD F+DLA L + + R Sbjct: 120 GDGDFRRLIEAVQRKGCRVTVVSTVKSQPPMTSDELRRQADTFVDLADLASVVGR 174 >gi|86137266|ref|ZP_01055844.1| hypothetical protein MED193_16367 [Roseobacter sp. MED193] gi|85826590|gb|EAQ46787.1| hypothetical protein MED193_16367 [Roseobacter sp. MED193] Length = 190 Score = 207 bits (526), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 98/179 (54%), Positives = 138/179 (77%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + E + Sbjct: 1 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFMRRGKLLRAFYYTALLENDE--Y 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+ELAVDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLHYNGFTMVTKPAKEYTDSMGRRKVKGNMDIELAVDAMELAPRVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F L+A+LQR+ +V++VST+ S P M SD+LRRQAD F++L LK+ I R P E Sbjct: 119 GDGDFRPLIASLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELEELKDVIGRPPRE 177 >gi|99082408|ref|YP_614562.1| hypothetical protein TM1040_2568 [Ruegeria sp. TM1040] gi|99038688|gb|ABF65300.1| protein of unknown function DUF88 [Ruegeria sp. TM1040] Length = 189 Score = 206 bits (525), Expect = 9e-52, Method: Compositional matrix adjust. Identities = 97/179 (54%), Positives = 137/179 (76%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYAS+KALGFDIDY+ L + F R ++RA+YYT ++ + E + Sbjct: 1 MFYKDERLALFIDGSNLYASAKALGFDIDYKLLRQEFMRRGKLVRAFYYTALLENDE--Y 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLHYNGFSMVTKPAKEYTDSMGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F L+A+LQR+ +V++VST+ S P M SD+LRRQAD F++L L++ I R P E Sbjct: 119 GDGDFRPLIASLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELEELRDVIGRPPRE 177 >gi|163738230|ref|ZP_02145646.1| hypothetical protein RGBS107_07449 [Phaeobacter gallaeciensis BS107] gi|163740168|ref|ZP_02147562.1| hypothetical protein RG210_08712 [Phaeobacter gallaeciensis 2.10] gi|161386026|gb|EDQ10401.1| hypothetical protein RG210_08712 [Phaeobacter gallaeciensis 2.10] gi|161388846|gb|EDQ13199.1| hypothetical protein RGBS107_07449 [Phaeobacter gallaeciensis BS107] Length = 189 Score = 205 bits (522), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 97/179 (54%), Positives = 137/179 (76%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + E + Sbjct: 1 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFMRRGKLLRAFYYTALLENDE--Y 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLHYNGFTMVTKPAKEYTDSMGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F L+A+LQR+ +V++VST+ S P M SD+LRRQAD F++L LK+ I R P E Sbjct: 119 GDGDFRPLIASLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELEELKDVIGRPPRE 177 >gi|259417563|ref|ZP_05741482.1| hypothetical protein SCH4B_2747 [Silicibacter sp. TrichCH4B] gi|259346469|gb|EEW58283.1| hypothetical protein SCH4B_2747 [Silicibacter sp. TrichCH4B] Length = 189 Score = 205 bits (522), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 96/177 (54%), Positives = 136/177 (76%), Gaps = 2/177 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYAS+KALGFDIDY+ L + F R ++RA+YYT ++ + E + Sbjct: 1 MFYKDERLALFIDGSNLYASAKALGFDIDYKLLRQEFMRRGKLVRAFYYTALLENDE--Y 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLHYNGFSMVTKPAKEYTDSMGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 GDG F L+A+LQR+ +V++VST+ S P M SD+LRRQAD F++L L++ I R P Sbjct: 119 GDGDFRPLIASLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELEELRDVIGRPP 175 >gi|56698038|ref|YP_168409.1| hypothetical protein SPO3206 [Ruegeria pomeroyi DSS-3] gi|56679775|gb|AAV96441.1| conserved hypothetical protein [Ruegeria pomeroyi DSS-3] Length = 190 Score = 204 bits (519), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 97/179 (54%), Positives = 136/179 (75%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + E + Sbjct: 1 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFMRRGKMLRAFYYTALLENDE--Y 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLHYNGFTMVTKPAKEYTDSMGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F LVA+LQR+ +V++VST+ S P M SD+LRRQAD F++L L+ I R P E Sbjct: 119 GDGDFRPLVASLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELEELREVIGRPPRE 177 >gi|254477746|ref|ZP_05091132.1| DUF88 [Ruegeria sp. R11] gi|214031989|gb|EEB72824.1| DUF88 [Ruegeria sp. R11] Length = 189 Score = 204 bits (518), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 97/179 (54%), Positives = 136/179 (75%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + E + Sbjct: 1 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFMRRGKLLRAFYYTALLENDE--Y 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLHYNGFTMVTKPAKEYTDSMGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F LV +LQR+ +V++VST+ S P M SD+LRRQAD F++L LK+ I R P E Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELEELKDVIGRPPRE 177 >gi|254511909|ref|ZP_05123976.1| hypothetical protein RKLH11_2451 [Rhodobacteraceae bacterium KLH11] gi|221535620|gb|EEE38608.1| hypothetical protein RKLH11_2451 [Rhodobacteraceae bacterium KLH11] Length = 191 Score = 204 bits (518), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 96/179 (53%), Positives = 137/179 (76%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + E + Sbjct: 1 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFMRRGKLLRAFYYTALLENDE--Y 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLHYNGFTMVTKPAKEYTDSMGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F L+A+LQR+ +V++VST+ S P M SD+LRRQAD F++L L++ I R P E Sbjct: 119 GDGDFRPLIASLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELEDLRDVIGRPPRE 177 >gi|254465558|ref|ZP_05078969.1| hypothetical protein RBY4I_2165 [Rhodobacterales bacterium Y4I] gi|206686466|gb|EDZ46948.1| hypothetical protein RBY4I_2165 [Rhodobacterales bacterium Y4I] Length = 189 Score = 203 bits (517), Expect = 7e-51, Method: Compositional matrix adjust. Identities = 96/179 (53%), Positives = 136/179 (75%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + E + Sbjct: 1 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFMRRGKLLRAFYYTALLENDE--Y 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLHYNGFTMVTKPAKEYTDSLGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F L+A+LQR+ +V++VST+ S P M SD LRRQAD F++L L++ I R P E Sbjct: 119 GDGDFRPLIASLQRQGVRVSVVSTIRSQPPMISDDLRRQADNFIELEELRDVIGRPPRE 177 >gi|126739732|ref|ZP_01755424.1| hypothetical protein RSK20926_05732 [Roseobacter sp. SK209-2-6] gi|126719378|gb|EBA16088.1| hypothetical protein RSK20926_05732 [Roseobacter sp. SK209-2-6] Length = 190 Score = 203 bits (516), Expect = 9e-51, Method: Compositional matrix adjust. Identities = 95/180 (52%), Positives = 138/180 (76%), Gaps = 2/180 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++K+LGFDIDY+ L + F R ++RA+YYT ++ + E + Sbjct: 1 MFYKDERLALFIDGSNLYAAAKSLGFDIDYKLLRQEFMRRGKLLRAFYYTALLENDE--Y 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLHYNGFTMVTKPAKEYTDSMGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F L+A+LQR+ +V++VST+ S P M SD+LRRQAD F++L LK+ I R P ++ Sbjct: 119 GDGDFRPLIASLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELEELKDVIGRPPRDN 178 >gi|84684017|ref|ZP_01011919.1| hypothetical protein 1099457000262_RB2654_16251 [Maritimibacter alkaliphilus HTCC2654] gi|84667770|gb|EAQ14238.1| hypothetical protein RB2654_16251 [Rhodobacterales bacterium HTCC2654] Length = 191 Score = 202 bits (515), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 96/181 (53%), Positives = 135/181 (74%), Gaps = 2/181 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++K+LGFDIDY+ L + F R ++RA+YYT ++ + + Sbjct: 1 MFYKDERLALFIDGSNLYAAAKSLGFDIDYKLLRQEFMRRGKLLRAFYYTALLEN--DDY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNGF +V K AKEFT++ GR++VK +MD+EL VDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLHYNGFTMVTKPAKEFTDSMGRRKVKGNMDIELTVDAMEIAPHVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F LV LQRK +V++VST+ S P M +D+LRRQAD F++L LK I R P +D Sbjct: 119 GDGDFRPLVEGLQRKGVRVSVVSTIRSQPPMIADELRRQADNFIELDELKEVIGRPPRDD 178 Query: 181 K 181 + Sbjct: 179 R 179 >gi|323139351|ref|ZP_08074403.1| protein of unknown function DUF88 [Methylocystis sp. ATCC 49242] gi|322395417|gb|EFX97966.1| protein of unknown function DUF88 [Methylocystis sp. ATCC 49242] Length = 215 Score = 202 bits (514), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 96/175 (54%), Positives = 131/175 (74%), Gaps = 2/175 (1%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 +E+IALFIDGANLY ++K FDIDYR+LL F R +IRA+YYT V+ D E FS + Sbjct: 4 QERIALFIDGANLYQAAKTQSFDIDYRRLLSEFEQRGRLIRAFYYTAVIEDEE--FSSIR 61 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 PL+DWL YNG+ VV K AK F + G +++K +MDVELAVDA ++ ++H+ +FSGDG Sbjct: 62 PLIDWLDYNGYAVVTKPAKAFVDATGHRKIKGNMDVELAVDAMGMADHIDHMWLFSGDGD 121 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 F +LVAA+QRK +V++VST+ + PSM +D+LRRQAD +DLA L ++I RDP+E Sbjct: 122 FCSLVAAVQRKGVRVSVVSTITTRPSMLADELRRQADEVIDLADLADKIGRDPNE 176 >gi|83951635|ref|ZP_00960367.1| hypothetical protein ISM_13770 [Roseovarius nubinhibens ISM] gi|83836641|gb|EAP75938.1| hypothetical protein ISM_13770 [Roseovarius nubinhibens ISM] Length = 191 Score = 202 bits (513), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 97/177 (54%), Positives = 134/177 (75%), Gaps = 2/177 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA+ KALGFDIDY+ L F R ++RA+YYT ++ + E + Sbjct: 1 MFYKDERLALFIDGSNLYAAGKALGFDIDYKLLRSEFMRRGKLLRAFYYTALLENDE--Y 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+ELAVDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLHYNGFSMVTKPAKEYTDSQGRRKVKGNMDIELAVDAMELAPHVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 GDG F LV +LQR+ +V++VST+ S P M SD+LRRQAD F++L LK+ I R P Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELDDLKDVIGRPP 175 >gi|294678836|ref|YP_003579451.1| hypothetical protein RCAP_rcc03320 [Rhodobacter capsulatus SB 1003] gi|294477656|gb|ADE87044.1| protein of unknown function DUF88 [Rhodobacter capsulatus SB 1003] Length = 193 Score = 202 bits (513), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 95/182 (52%), Positives = 137/182 (75%), Gaps = 2/182 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + +++ Sbjct: 1 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFERRGKLVRAFYYTALLEN--EEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNG+ +V K AKE+T++ GR++VK +MD+ELAV+A E + L+H V+FS Sbjct: 59 SPIRPLVDWLHYNGYAMVTKPAKEYTDSMGRRKVKGNMDIELAVNAMELAPRLDHAVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F LV ALQR +V++VST+ S P M +D+LRRQAD F++L L+ I R P E Sbjct: 119 GDGDFRPLVEALQRMGVRVSVVSTIRSQPPMIADELRRQADNFIELDALREVIGRPPREP 178 Query: 181 KK 182 ++ Sbjct: 179 RE 180 >gi|126726103|ref|ZP_01741945.1| hypothetical protein RB2150_07843 [Rhodobacterales bacterium HTCC2150] gi|126705307|gb|EBA04398.1| hypothetical protein RB2150_07843 [Rhodobacterales bacterium HTCC2150] Length = 191 Score = 202 bits (513), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 94/179 (52%), Positives = 137/179 (76%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++K+LGFDIDY+ L F R ++RA+YYT ++ + E + Sbjct: 1 MFYRDERLALFIDGSNLYAAAKSLGFDIDYKLLRTEFMRRGKLLRAFYYTALLENDE--Y 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLHYNGFNMVTKPAKEYTDSQGRRKVKGNMDIELTVDALELAPHVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F ++AA+QR+ +V++VST+ S+P M SD+LRRQAD F++L LK+ + R P E Sbjct: 119 GDGDFRPMIAAVQRQGVRVSVVSTIRSNPPMISDELRRQADNFIELDELKDVVGRPPRE 177 >gi|85705102|ref|ZP_01036202.1| hypothetical protein ROS217_04305 [Roseovarius sp. 217] gi|85670424|gb|EAQ25285.1| hypothetical protein ROS217_04305 [Roseovarius sp. 217] Length = 190 Score = 202 bits (513), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 96/177 (54%), Positives = 134/177 (75%), Gaps = 2/177 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA+ KALGFDIDY+ L F R ++RA+YYT ++ + E + Sbjct: 1 MFYKDERLALFIDGSNLYAAGKALGFDIDYKLLRSEFMRRGKLLRAFYYTALLENDE--Y 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNG+ +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLHYNGYSMVTKPAKEYTDSQGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 GDG F LV +LQR+ +V++VST+ S P M SD+LRRQAD F++LA LK+ I R P Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELADLKDVIGRPP 175 >gi|255263963|ref|ZP_05343305.1| hypothetical protein TR2A62_2961 [Thalassiobium sp. R2A62] gi|255106298|gb|EET48972.1| hypothetical protein TR2A62_2961 [Thalassiobium sp. R2A62] Length = 192 Score = 201 bits (512), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 96/179 (53%), Positives = 136/179 (75%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++KALGFDIDY+ L F R ++RA+YYT ++ + E + Sbjct: 1 MFYRDERLALFIDGSNLYAAAKALGFDIDYKLLRTEFMRRGKMLRAFYYTALLENDE--Y 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWL+YNGF +V K AKEFT++ GR+++K +MD+ELAVDA E + ++H+VIFS Sbjct: 59 SPIRPLVDWLNYNGFTMVTKPAKEFTDSIGRRKIKGNMDIELAVDAMELAPHVDHIVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F LV A+QRK +V++VST+ S P M +D+LRRQAD F++L L++ + R P E Sbjct: 119 GDGDFRPLVEAIQRKGVRVSVVSTIRSQPPMIADELRRQADNFIELDELRDVVGRPPRE 177 >gi|89070109|ref|ZP_01157439.1| hypothetical protein OG2516_09048 [Oceanicola granulosus HTCC2516] gi|89044330|gb|EAR50473.1| hypothetical protein OG2516_09048 [Oceanicola granulosus HTCC2516] Length = 193 Score = 201 bits (511), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 95/181 (52%), Positives = 135/181 (74%), Gaps = 2/181 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++K+LGFDIDY+ L + F R ++RA+YYT ++ + + Sbjct: 1 MFYRDERLALFIDGSNLYAAAKSLGFDIDYKLLRQEFMRRGKLLRAFYYTALLEN--DDY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNGF +V K AKEFT++ GR++VK +MD+EL VDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLHYNGFTMVTKPAKEFTDSQGRRKVKGNMDIELTVDAMEIASHVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F LV ALQRK +V++ ST+ S P M +D+LRRQAD F++L L+ + R P ED Sbjct: 119 GDGDFRPLVEALQRKGVRVSVCSTIRSQPPMIADELRRQADNFIELDELREVVGRPPRED 178 Query: 181 K 181 + Sbjct: 179 R 179 >gi|126728513|ref|ZP_01744329.1| hypothetical protein SSE37_21022 [Sagittula stellata E-37] gi|126711478|gb|EBA10528.1| hypothetical protein SSE37_21022 [Sagittula stellata E-37] Length = 195 Score = 201 bits (511), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 95/181 (52%), Positives = 136/181 (75%), Gaps = 2/181 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + E + Sbjct: 6 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFARRGKMVRAFYYTALLENDE--Y 63 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS Sbjct: 64 SPIRPLVDWLHYNGFTMVTKPAKEYTDSQGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 123 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F LV +LQR+ +V++VST+ S P M +D+LRRQAD F++L L+ I R P E Sbjct: 124 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMIADELRRQADNFIELDELREVIGRPPREQ 183 Query: 181 K 181 + Sbjct: 184 Q 184 >gi|84515155|ref|ZP_01002518.1| hypothetical protein SKA53_13063 [Loktanella vestfoldensis SKA53] gi|84511314|gb|EAQ07768.1| hypothetical protein SKA53_13063 [Loktanella vestfoldensis SKA53] Length = 187 Score = 201 bits (511), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 98/183 (53%), Positives = 138/183 (75%), Gaps = 5/183 (2%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA+++ALGFDIDY+ L + F R ++RA+YYT ++ + E + Sbjct: 1 MFYRDERLALFIDGSNLYAAARALGFDIDYKLLRQEFMRRGKLLRAFYYTALLENDE--Y 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNG+ ++ K AKEFT++ GR++VK +MD+ELAVDA E + L+H VIFS Sbjct: 59 SPIRPLVDWLHYNGYSMITKPAKEFTDSLGRRKVKGNMDIELAVDAMELTPYLDHAVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI---ARDP 177 GDG F L+ ALQRK +V++VST+ S P M +D+LRRQAD F++L L++ I AR+P Sbjct: 119 GDGDFRPLIEALQRKGVRVSVVSTIRSQPPMIADELRRQADNFIELEELRDVIGRPAREP 178 Query: 178 DED 180 D Sbjct: 179 RTD 181 >gi|260432747|ref|ZP_05786718.1| RtsE [Silicibacter lacuscaerulensis ITI-1157] gi|260416575|gb|EEX09834.1| RtsE [Silicibacter lacuscaerulensis ITI-1157] Length = 190 Score = 201 bits (510), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 95/179 (53%), Positives = 137/179 (76%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + E + Sbjct: 1 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFMRRGKLLRAFYYTALLENDE--Y 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWL+YNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLNYNGFTMVTKPAKEYTDSMGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F L+A+LQR+ +V++VST+ S P M SD+LRRQAD F++L L++ I R P E Sbjct: 119 GDGDFRPLIASLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELDDLRDVIGRPPRE 177 >gi|84500570|ref|ZP_00998819.1| hypothetical protein OB2597_11446 [Oceanicola batsensis HTCC2597] gi|84391523|gb|EAQ03855.1| hypothetical protein OB2597_11446 [Oceanicola batsensis HTCC2597] Length = 190 Score = 201 bits (510), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 95/179 (53%), Positives = 136/179 (75%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + E + Sbjct: 1 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFMRRGKLLRAFYYTALLENDE--Y 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLHYNGFTMVTKPAKEYTDSQGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F LV +LQR+ +V++VST+ S P M +D+LRRQAD F++L L++ I R P E Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMIADELRRQADNFIELDDLRDVIGRPPRE 177 >gi|260428353|ref|ZP_05782332.1| RtsE [Citreicella sp. SE45] gi|260422845|gb|EEX16096.1| RtsE [Citreicella sp. SE45] Length = 191 Score = 200 bits (509), Expect = 6e-50, Method: Compositional matrix adjust. Identities = 95/181 (52%), Positives = 136/181 (75%), Gaps = 2/181 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + E + Sbjct: 1 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFVRRGKMVRAFYYTALLENDE--Y 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLHYNGFTMVTKPAKEYTDSQGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F LV +LQR+ +V++VST+ S P M +D+LRRQAD F++L L+ I R P E Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMIADELRRQADNFIELDELREVIGRPPREQ 178 Query: 181 K 181 + Sbjct: 179 Q 179 >gi|83855035|ref|ZP_00948565.1| hypothetical protein NAS141_09906 [Sulfitobacter sp. NAS-14.1] gi|83941558|ref|ZP_00954020.1| hypothetical protein EE36_04978 [Sulfitobacter sp. EE-36] gi|83842878|gb|EAP82045.1| hypothetical protein NAS141_09906 [Sulfitobacter sp. NAS-14.1] gi|83847378|gb|EAP85253.1| hypothetical protein EE36_04978 [Sulfitobacter sp. EE-36] Length = 181 Score = 200 bits (509), Expect = 6e-50, Method: Compositional matrix adjust. Identities = 96/179 (53%), Positives = 135/179 (75%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++K LGFDIDY+ L + F R ++RA+YYT ++ + E + Sbjct: 1 MFYKDERLALFIDGSNLYAAAKNLGFDIDYKLLRQEFMRRGKLLRAFYYTALLENDE--Y 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWL+YNGF +V K AKE+T++ GR++VK +MD+ELAVDA E + L+H+VIFS Sbjct: 59 SPIRPLVDWLNYNGFSMVTKPAKEYTDSMGRRKVKGNMDIELAVDAMELAPHLDHIVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F LV +LQR+ +V++VST+ S P M SD+LRRQ D F++L L++ I R P E Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMISDELRRQVDNFIELEDLRDVIGRPPRE 177 >gi|149200815|ref|ZP_01877790.1| hypothetical protein RTM1035_14357 [Roseovarius sp. TM1035] gi|149145148|gb|EDM33174.1| hypothetical protein RTM1035_14357 [Roseovarius sp. TM1035] Length = 190 Score = 200 bits (509), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 96/177 (54%), Positives = 133/177 (75%), Gaps = 2/177 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA+ KALGFDIDY+ L F R ++RA+YYT ++ + E + Sbjct: 1 MFYKDERLALFIDGSNLYAAGKALGFDIDYKLLRSEFMRRGKLLRAFYYTALLENDE--Y 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNG+ +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLHYNGYSMVTKPAKEYTDSQGRRKVKGNMDIELTVDAMELAPRVDHVVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 GDG F LV +LQR+ +V++VST+ S P M SD LRRQAD F++LA LK+ I R P Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMISDDLRRQADNFIELADLKDVIGRPP 175 >gi|163733871|ref|ZP_02141313.1| hypothetical protein RLO149_06148 [Roseobacter litoralis Och 149] gi|161392982|gb|EDQ17309.1| hypothetical protein RLO149_06148 [Roseobacter litoralis Och 149] Length = 182 Score = 200 bits (508), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 95/179 (53%), Positives = 136/179 (75%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++K+LGFDIDY+ L + F R ++RA+YYT ++ + E + Sbjct: 1 MFYKDERLALFIDGSNLYAAAKSLGFDIDYKLLRQEFMRRGKLLRAFYYTALLENDE--Y 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWL+YNGF +V K AKE+T++ GR++VK +MD+ELAVDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLNYNGFTMVTKPAKEYTDSMGRRKVKGNMDIELAVDAMELAPRVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F L+ +LQR +V++VST+ S P M SD+LRRQAD F++L LK+ I R P E Sbjct: 119 GDGDFRPLIESLQRSGVRVSVVSTIRSQPPMISDELRRQADNFIELDELKDVIGRPPRE 177 >gi|254439991|ref|ZP_05053485.1| conserved hypothetical protein [Octadecabacter antarcticus 307] gi|198255437|gb|EDY79751.1| conserved hypothetical protein [Octadecabacter antarcticus 307] Length = 195 Score = 199 bits (507), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 96/175 (54%), Positives = 133/175 (76%), Gaps = 2/175 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF EK+ALFIDG+NLYAS+K+LGFDIDY+ L F R ++RAYYYT ++ + E + Sbjct: 1 MFYRDEKLALFIDGSNLYASAKSLGFDIDYKLLRAEFMRRGKMLRAYYYTALLENDE--Y 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWL+YNGF +V K AKEFT++ GR+++K +MD+ELAVDA E + ++H+VIFS Sbjct: 59 SPIRPLVDWLNYNGFTMVTKPAKEFTDSMGRRKIKGNMDIELAVDALELAPHVDHIVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 GDG F LV +LQRK +V++VST+ S P M +D+LRRQ D F++L L++ I R Sbjct: 119 GDGDFRPLVESLQRKGVRVSVVSTIRSQPPMIADELRRQCDNFIELDELRDVIGR 173 >gi|163744864|ref|ZP_02152224.1| hypothetical protein OIHEL45_04735 [Oceanibulbus indolifex HEL-45] gi|161381682|gb|EDQ06091.1| hypothetical protein OIHEL45_04735 [Oceanibulbus indolifex HEL-45] Length = 184 Score = 199 bits (506), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 96/177 (54%), Positives = 134/177 (75%), Gaps = 2/177 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + E + Sbjct: 1 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFMRRGKLLRAFYYTALLENDE--Y 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWL+YNGF +V K AKE+T++ GR++VK MD+ELAVDA E + ++H+VIFS Sbjct: 59 SPIRPLVDWLNYNGFSMVTKPAKEYTDSMGRRKVKGDMDIELAVDAMELAPRVDHIVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 GDG F LV +LQR+ +V++VST+ S P M SD LRRQAD F++L L++ I R P Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMISDDLRRQADNFIELDDLRDVIGRPP 175 >gi|260576279|ref|ZP_05844271.1| protein of unknown function DUF88 [Rhodobacter sp. SW2] gi|259021547|gb|EEW24851.1| protein of unknown function DUF88 [Rhodobacter sp. SW2] Length = 190 Score = 199 bits (506), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 94/181 (51%), Positives = 137/181 (75%), Gaps = 2/181 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF +++ALFIDG+NLYA++KALGFDIDYR L + F R ++RA+YYT ++ + E + Sbjct: 1 MFYKDDRLALFIDGSNLYAAAKALGFDIDYRLLRQEFMRRGKLLRAFYYTALLENDE--Y 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL V+A E + ++H+V+FS Sbjct: 59 SPIRPLVDWLHYNGFSMVTKPAKEYTDSQGRRKVKGNMDIELTVNAMELAPHVDHVVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F LV +LQR+ +V++VST+ S P M +D+LRRQAD F++L L++ I R P E Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMIADELRRQADNFIELDELRDVIGRPPREP 178 Query: 181 K 181 + Sbjct: 179 R 179 >gi|146278613|ref|YP_001168772.1| hypothetical protein Rsph17025_2579 [Rhodobacter sphaeroides ATCC 17025] gi|145556854|gb|ABP71467.1| protein of unknown function DUF88 [Rhodobacter sphaeroides ATCC 17025] Length = 190 Score = 199 bits (506), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 94/181 (51%), Positives = 135/181 (74%), Gaps = 2/181 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + + Sbjct: 1 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFMRRGKLLRAFYYTALLEN--DDY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLHYNGFTMVTKPAKEYTDSQGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F LV +LQR+ +V++VST+ S P M +D+LRRQAD F++L L+ I R P E Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMIADELRRQADNFIELDELREVIGRPPREP 178 Query: 181 K 181 + Sbjct: 179 R 179 >gi|77462212|ref|YP_351716.1| hypothetical protein RSP_1667 [Rhodobacter sphaeroides 2.4.1] gi|126461074|ref|YP_001042188.1| hypothetical protein Rsph17029_0300 [Rhodobacter sphaeroides ATCC 17029] gi|221641166|ref|YP_002527428.1| hypothetical protein RSKD131_3067 [Rhodobacter sphaeroides KD131] gi|332560093|ref|ZP_08414415.1| hypothetical protein RSWS8N_13570 [Rhodobacter sphaeroides WS8N] gi|77386630|gb|ABA77815.1| conserved hypothetical protein [Rhodobacter sphaeroides 2.4.1] gi|126102738|gb|ABN75416.1| protein of unknown function DUF88 [Rhodobacter sphaeroides ATCC 17029] gi|221161947|gb|ACM02927.1| Hypothetical Protein RSKD131_3067 [Rhodobacter sphaeroides KD131] gi|332277805|gb|EGJ23120.1| hypothetical protein RSWS8N_13570 [Rhodobacter sphaeroides WS8N] Length = 190 Score = 199 bits (506), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 94/181 (51%), Positives = 135/181 (74%), Gaps = 2/181 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + + Sbjct: 1 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFMRRGKLLRAFYYTALLEN--DDY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLHYNGFTMVTKPAKEYTDSQGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F LV +LQR+ +V++VST+ S P M +D+LRRQAD F++L L+ I R P E Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMIADELRRQADNFIELDELREVIGRPPREP 178 Query: 181 K 181 + Sbjct: 179 R 179 >gi|209964804|ref|YP_002297719.1| hypothetical protein RC1_1502 [Rhodospirillum centenum SW] gi|209958270|gb|ACI98906.1| conserved hypothetical protein [Rhodospirillum centenum SW] Length = 233 Score = 199 bits (506), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 90/175 (51%), Positives = 133/175 (76%), Gaps = 2/175 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 +F E++A+FIDGANLYA++++LGFDIDY++LL+ F R ++RA+YYT +V D Q++ Sbjct: 5 IFYQEERLAMFIDGANLYAAARSLGFDIDYKRLLELFAGRGRLVRAFYYTALVED--QEY 62 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWL YNG+ +V K KE+T+ GR+++K +MD+ELA+D E +E ++H+++FS Sbjct: 63 SPIRPLVDWLDYNGYTMVTKPTKEYTDASGRRKIKGNMDIELAIDVMEMAEHVDHILLFS 122 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 GDG F LV A+QRK +VT++STV S P M +D+LRRQAD F++L L I R Sbjct: 123 GDGDFRRLVEAVQRKGVRVTVISTVRSTPPMVADELRRQADNFLELQDLSPNIMR 177 >gi|110678677|ref|YP_681684.1| hypothetical protein RD1_1356 [Roseobacter denitrificans OCh 114] gi|109454793|gb|ABG30998.1| conserved hypothetical protein [Roseobacter denitrificans OCh 114] Length = 182 Score = 199 bits (505), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 94/179 (52%), Positives = 135/179 (75%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++K+LGFDIDY+ L + F R ++RA+YYT ++ + E + Sbjct: 1 MFYKDERLALFIDGSNLYAAAKSLGFDIDYKLLRQEFMRRGKLLRAFYYTALLENDE--Y 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWL+YNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLNYNGFTMVTKPAKEYTDSMGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F L+ +LQR +V++VST+ S P M SD+LRRQAD F++L LK+ I R P E Sbjct: 119 GDGDFRPLIESLQRSGVRVSVVSTIRSQPPMISDELRRQADNFIELDELKDVIGRPPRE 177 >gi|83311350|ref|YP_421614.1| hypothetical protein amb2251 [Magnetospirillum magneticum AMB-1] gi|82946191|dbj|BAE51055.1| Uncharacterized conserved protein [Magnetospirillum magneticum AMB-1] Length = 187 Score = 198 bits (504), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 90/170 (52%), Positives = 132/170 (77%), Gaps = 2/170 (1%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 E++ LFIDG+NLY++++ALGFDIDY+KLL F + +IRA+YYT ++ D Q++SP+ P Sbjct: 7 ERLGLFIDGSNLYSAARALGFDIDYKKLLNLFAGKGRLIRAFYYTALMED--QEYSPIRP 64 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125 L+DWL YNG+ +V K KEFT+ GR+++K +MD+ELA+D E + L+H+V+FSGDG F Sbjct: 65 LVDWLDYNGYTMVTKPTKEFTDAMGRRKIKGNMDIELAIDVMEMCQYLDHVVLFSGDGDF 124 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 LV A+QRK +V++VST+ S P M +D+LRRQAD F++L L+++IAR Sbjct: 125 RRLVEAVQRKGVRVSVVSTIRSQPPMVADELRRQADVFIELQDLESQIAR 174 >gi|83858189|ref|ZP_00951711.1| hypothetical protein OA2633_01781 [Oceanicaulis alexandrii HTCC2633] gi|83853012|gb|EAP90864.1| hypothetical protein OA2633_01781 [Oceanicaulis alexandrii HTCC2633] Length = 190 Score = 198 bits (504), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 90/175 (51%), Positives = 132/175 (75%), Gaps = 2/175 (1%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 F P EK+ LFIDGANLY++++ L FDIDY++LL+ FR R +IRA YYT ++ ++++ Sbjct: 3 FYPNEKLGLFIDGANLYSAARNLDFDIDYKRLLEEFRKRGRLIRANYYTALI--ESEEYT 60 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 P+ PL+DWL YNGF+V+ K AKE+T++ GR+R+K MDV+LA+D E ++ L+H+V+FSG Sbjct: 61 PIRPLIDWLDYNGFKVITKAAKEYTDDSGRRRIKGDMDVDLAIDVMEAADYLDHIVLFSG 120 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 DG F +V A+QRK +V++VST+ S P MA+D LRRQAD F++L L + R+ Sbjct: 121 DGDFKKVVEAVQRKGVRVSVVSTLKSSPPMAADDLRRQADTFIELQDLGKLVGRE 175 >gi|254453678|ref|ZP_05067115.1| DUF88 [Octadecabacter antarcticus 238] gi|198268084|gb|EDY92354.1| DUF88 [Octadecabacter antarcticus 238] Length = 194 Score = 198 bits (504), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 95/175 (54%), Positives = 133/175 (76%), Gaps = 2/175 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF EK+ALFIDG+NLYA++KALGFDIDY+ L F R ++RA+YYT ++ + E + Sbjct: 1 MFYRDEKLALFIDGSNLYAAAKALGFDIDYKLLRSEFMRRGKMLRAFYYTALLENDE--Y 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWL+YNGF +V K AKEFT++ GR+++K +MD+ELAVDA E + ++H+VIFS Sbjct: 59 SPIRPLVDWLNYNGFTMVTKPAKEFTDSMGRRKIKGNMDIELAVDALELAPHVDHIVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 GDG F LV +LQRK +V++VST+ S P M +D+LRRQ D F++L L++ I R Sbjct: 119 GDGDFRPLVESLQRKGVRVSVVSTIRSQPPMIADELRRQCDNFIELDELRDVIGR 173 >gi|254460504|ref|ZP_05073920.1| hypothetical protein RB2083_1094 [Rhodobacterales bacterium HTCC2083] gi|206677093|gb|EDZ41580.1| hypothetical protein RB2083_1094 [Rhodobacteraceae bacterium HTCC2083] Length = 190 Score = 197 bits (501), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 95/179 (53%), Positives = 134/179 (74%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG NLYA++KALGFDIDY+ L F R ++RA+YYT ++ + E + Sbjct: 1 MFYKDERLALFIDGLNLYAAAKALGFDIDYKLLRTEFMRRGKMLRAFYYTALLENDE--Y 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWL+YNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLNYNGFTMVTKQAKEYTDSQGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F LV +LQR+ +V++VST+ S P M SD+LRRQAD F++L LK+ + R P E Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELDELKDVLGRPPRE 177 >gi|46201864|ref|ZP_00208280.1| COG1432: Uncharacterized conserved protein [Magnetospirillum magnetotacticum MS-1] Length = 187 Score = 197 bits (501), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 89/170 (52%), Positives = 132/170 (77%), Gaps = 2/170 (1%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 E++ LFIDG+NLY+++++LGFDIDY+KLL F + +IRA+YYT ++ D Q++SP+ P Sbjct: 7 ERLGLFIDGSNLYSAARSLGFDIDYKKLLNLFAGKGRLIRAFYYTALMED--QEYSPIRP 64 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125 L+DWL YNG+ +V K KEFT+ GR+++K +MD+ELA+D E + L+H+V+FSGDG F Sbjct: 65 LVDWLDYNGYTMVTKPTKEFTDAMGRRKIKGNMDIELAIDVMEMCQYLDHVVLFSGDGDF 124 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 LV A+QRK +V++VST+ S P M +D+LRRQAD F++L L+++IAR Sbjct: 125 RRLVEAVQRKGVRVSVVSTIRSQPPMVADELRRQADVFIELQDLESQIAR 174 >gi|254487193|ref|ZP_05100398.1| DUF88 [Roseobacter sp. GAI101] gi|214044062|gb|EEB84700.1| DUF88 [Roseobacter sp. GAI101] Length = 181 Score = 197 bits (500), Expect = 7e-49, Method: Compositional matrix adjust. Identities = 93/175 (53%), Positives = 134/175 (76%), Gaps = 2/175 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++K+LGFDIDY+ L + F R ++RA+YYT ++ + +++ Sbjct: 1 MFYKDERLALFIDGSNLYAAAKSLGFDIDYKLLRQEFMRRGKLLRAFYYTALLEN--EEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWL+YNGF +V K AKE+T++ GR++VK +MD+ELAVDA E + L+H+VIFS Sbjct: 59 SPIRPLVDWLNYNGFSMVTKPAKEYTDSMGRRKVKGNMDIELAVDAMELAPHLDHIVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 GDG F LV +LQR+ +V++VST+ S P M SD LRRQ D F++L L++ I R Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMISDDLRRQVDNFIELEDLRDVIGR 173 >gi|149913459|ref|ZP_01901992.1| hypothetical protein RAZWK3B_09161 [Roseobacter sp. AzwK-3b] gi|149812579|gb|EDM72408.1| hypothetical protein RAZWK3B_09161 [Roseobacter sp. AzwK-3b] Length = 190 Score = 197 bits (500), Expect = 7e-49, Method: Compositional matrix adjust. Identities = 94/177 (53%), Positives = 134/177 (75%), Gaps = 2/177 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA+++ALGFDIDY+ L F R ++RA+YYT ++ + E + Sbjct: 1 MFYKDERLALFIDGSNLYAAARALGFDIDYKLLRAEFMRRGKLLRAFYYTAMLENDE--Y 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWL+YNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLNYNGFSMVTKPAKEYTDSQGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 GDG F LV +LQR+ +V++VST+ S P M SD+LRRQAD F++L LK+ I R P Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELDDLKDVIGRPP 175 >gi|148259544|ref|YP_001233671.1| hypothetical protein Acry_0528 [Acidiphilium cryptum JF-5] gi|326402750|ref|YP_004282831.1| hypothetical protein ACMV_06020 [Acidiphilium multivorum AIU301] gi|146401225|gb|ABQ29752.1| protein of unknown function DUF88 [Acidiphilium cryptum JF-5] gi|325049611|dbj|BAJ79949.1| hypothetical protein ACMV_06020 [Acidiphilium multivorum AIU301] Length = 190 Score = 197 bits (500), Expect = 7e-49, Method: Compositional matrix adjust. Identities = 92/178 (51%), Positives = 131/178 (73%), Gaps = 3/178 (1%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 P+EK ALFIDGANLYA+S+ALGFD+DYR+LL F R ++RAYYY+ ++ +++SPL Sbjct: 5 PQEKTALFIDGANLYAASRALGFDVDYRRLLDFF-DRVNLVRAYYYSALLD--TEEYSPL 61 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 PL DWL YNG+ +V K AKEFT+ GR+RVK +MD+ELA+D E + ++H ++FSGD Sbjct: 62 KPLTDWLAYNGYTLVTKPAKEFTDGAGRRRVKGNMDIELAIDMLEMAPHIDHAILFSGDS 121 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 F LV A+QR+ +V+++ST+ + P M +D+LRRQ+D F+DLA + NE R E + Sbjct: 122 DFRRLVEAVQRRGVRVSVISTIKTSPPMIADELRRQSDQFVDLADIANEFTRRQTEPR 179 >gi|119384144|ref|YP_915200.1| hypothetical protein Pden_1403 [Paracoccus denitrificans PD1222] gi|119373911|gb|ABL69504.1| protein of unknown function DUF88 [Paracoccus denitrificans PD1222] Length = 183 Score = 197 bits (500), Expect = 8e-49, Method: Compositional matrix adjust. Identities = 93/179 (51%), Positives = 134/179 (74%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF +++ALFIDG+NLYA++K+LGFDIDY+ L + F R +IRAYYYT ++ + + + Sbjct: 1 MFYKDDRLALFIDGSNLYAAAKSLGFDIDYKLLRQEFERRGKLIRAYYYTALLEN--EDY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNG+ +V K A+E+T+ GR++VK +MDVEL ++A E + L+H V+FS Sbjct: 59 SPIRPLVDWLHYNGYSMVTKPAREYTDALGRRKVKGNMDVELVINAMELAPRLDHAVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F LV ALQR+ +V++VST+ S P M +D+LRRQAD F++L L++ I R P E Sbjct: 119 GDGDFRPLVEALQRQGVRVSVVSTMRSQPPMIADELRRQADNFIELDALRDIIGRPPRE 177 >gi|114327650|ref|YP_744807.1| putative cytoplasmic protein [Granulibacter bethesdensis CGDNIH1] gi|114315824|gb|ABI61884.1| hypothetical cytosolic protein [Granulibacter bethesdensis CGDNIH1] Length = 195 Score = 196 bits (498), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 89/166 (53%), Positives = 128/166 (77%), Gaps = 2/166 (1%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 F P E+IALFIDGANLY++S+ LGF++DYR LL FRSR+ ++RAYYY+ V+ +++S Sbjct: 3 FLPTERIALFIDGANLYSASRNLGFEVDYRNLLSTFRSRSQLVRAYYYSAVL--ETEEYS 60 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 PL PL DWL YNG+ +V K A+EFT++ GR+R+K +MD+ELAVD E ++ ++H V+FSG Sbjct: 61 PLKPLTDWLAYNGYNLVTKPAREFTDSSGRRRIKGNMDIELAVDMMEIADRIDHAVLFSG 120 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 D F +V A+QRK +V++VS++ + P M +D LRRQAD F++LA Sbjct: 121 DADFRRVVEAVQRKGVRVSVVSSIRTSPPMIADDLRRQADEFLELA 166 >gi|114770098|ref|ZP_01447636.1| hypothetical protein OM2255_10695 [alpha proteobacterium HTCC2255] gi|114548935|gb|EAU51818.1| hypothetical protein OM2255_10695 [alpha proteobacterium HTCC2255] Length = 174 Score = 196 bits (497), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 90/171 (52%), Positives = 131/171 (76%), Gaps = 2/171 (1%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 E+ ALFIDG+NL+AS+KAL +IDY+KL F R ++RAYYYT ++ + E SPL P Sbjct: 6 ERTALFIDGSNLHASAKALNLEIDYKKLKNEFIKRGKLLRAYYYTALIENEEN--SPLRP 63 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125 L+DWL YNG+ +V+K AKEFT++ G+KR+K +MD+ELA+DA E + +EH++IFSGDG F Sbjct: 64 LVDWLTYNGYTIVSKPAKEFTDSAGQKRIKGNMDIELAIDAMELAPNVEHIIIFSGDGDF 123 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 +LV +LQR+ +V++VST S P M +D+LRRQAD ++DL L++ I+++ Sbjct: 124 QSLVKSLQRQGVRVSVVSTTRSHPPMIADELRRQADNYIDLEELRDVISQN 174 >gi|159042747|ref|YP_001531541.1| hypothetical protein Dshi_0191 [Dinoroseobacter shibae DFL 12] gi|157910507|gb|ABV91940.1| protein of unknown function DUF88 [Dinoroseobacter shibae DFL 12] Length = 190 Score = 196 bits (497), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 93/174 (53%), Positives = 132/174 (75%), Gaps = 2/174 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF +++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + E + Sbjct: 1 MFYKDDRLALFIDGSNLYAAAKALGFDIDYKLLRQEFMRRGKLLRAFYYTALLENDE--Y 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+ELAVDA E + ++H V+FS Sbjct: 59 SPIRPLVDWLHYNGFSMVTKPAKEYTDSQGRRKVKGNMDIELAVDAMELAPHMDHAVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 GDG F L+ +LQR+ +V++VST+ S P M SD+LRRQAD F++L LK I Sbjct: 119 GDGDFRPLIESLQRRGVRVSVVSTIRSHPPMISDELRRQADNFIELDELKEIIG 172 >gi|126733749|ref|ZP_01749496.1| hypothetical protein RCCS2_06319 [Roseobacter sp. CCS2] gi|126716615|gb|EBA13479.1| hypothetical protein RCCS2_06319 [Roseobacter sp. CCS2] Length = 193 Score = 195 bits (495), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 93/181 (51%), Positives = 137/181 (75%), Gaps = 2/181 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++K+LGFDIDY+ L + F R ++RA+YYT ++ + E + Sbjct: 1 MFYRDERLALFIDGSNLYAAAKSLGFDIDYKLLRQEFMRRGKMLRAFYYTALLENDE--Y 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWL+YNGF +V K AKE+T++ GR++VK +MD+ELAVDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLNYNGFTMVTKPAKEYTDSMGRRKVKGNMDIELAVDAMELAPYVDHVVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F LV +LQRK +V++VST+ S P M +D+LRRQAD F++L L++ + R E Sbjct: 119 GDGDFRPLVESLQRKGVRVSVVSTIRSQPPMIADELRRQADNFIELDELRDVVGRPTREP 178 Query: 181 K 181 + Sbjct: 179 R 179 >gi|288958017|ref|YP_003448358.1| hypothetical protein AZL_011760 [Azospirillum sp. B510] gi|288910325|dbj|BAI71814.1| hypothetical protein AZL_011760 [Azospirillum sp. B510] Length = 200 Score = 194 bits (493), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 90/175 (51%), Positives = 130/175 (74%), Gaps = 2/175 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDGANLYA++++LGFDIDY++L F ++RA+YYT +V D Q++ Sbjct: 1 MFYKEERLALFIDGANLYAAARSLGFDIDYKRLRDGFAGEGRLVRAFYYTALVED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWL YNG+ +V K KEFT+ GR+++K +MD+ELA+D E ++ ++H+++FS Sbjct: 59 SPIRPLVDWLDYNGYTMVTKPTKEFTDASGRRKIKGNMDIELAIDVMEMADHVDHILLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 GDG F LV A+QRK + ++VSTV S P M +D+LRRQAD F++L L IAR Sbjct: 119 GDGDFRRLVEAVQRKGVRFSVVSTVRSQPPMVADELRRQADNFIELQELAPFIAR 173 >gi|239787551|emb|CAX84020.1| conserved uncharacterized protein [uncultured bacterium] Length = 206 Score = 194 bits (492), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 97/175 (55%), Positives = 136/175 (77%), Gaps = 2/175 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 +F P+E++ALFIDG+NLYA+++ALGFDIDY++LL+ F + +IRA+YYT +V D Q++ Sbjct: 2 VFYPQERVALFIDGSNLYAAARALGFDIDYKRLLQMFAGKGRLIRAFYYTALVED--QEY 59 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWL YNG+ +V K KEFT+ GR+++K +MD+ELA+D E SE L+H+V+FS Sbjct: 60 SPIRPLVDWLDYNGYTMVTKPTKEFTDASGRRKIKGNMDIELAIDVMEMSEHLDHIVLFS 119 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 GDG F LV A+QRK +VT+VSTV S P M +D+LRRQAD F++L L+ I R Sbjct: 120 GDGDFRRLVDAVQRKGVRVTVVSTVRSQPPMVADELRRQADNFVELQDLQPSIER 174 >gi|89053002|ref|YP_508453.1| hypothetical protein Jann_0511 [Jannaschia sp. CCS1] gi|88862551|gb|ABD53428.1| protein of unknown function DUF88 [Jannaschia sp. CCS1] Length = 191 Score = 192 bits (489), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 94/174 (54%), Positives = 128/174 (73%), Gaps = 2/174 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++KALGFDIDY+ L F R ++RA YYT ++ + + + Sbjct: 1 MFYRDERLALFIDGSNLYAAAKALGFDIDYKLLRSEFMQRGKLLRANYYTALLENDD--Y 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNGF +V K AKEF ++ GR++VK +MD+ELAVDA E + ++H+VIFS Sbjct: 59 SPIRPLVDWLHYNGFNMVTKPAKEFVDSQGRRKVKGNMDIELAVDAMETAPHVDHIVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 GDG F LV +LQRK +V++VST+ S P M +D LRRQ D F++L LK I Sbjct: 119 GDGDFRPLVESLQRKGCRVSVVSTIRSQPPMIADDLRRQCDNFIELLDLKEAIG 172 >gi|254293927|ref|YP_003059950.1| hypothetical protein Hbal_1565 [Hirschia baltica ATCC 49814] gi|254042458|gb|ACT59253.1| protein of unknown function DUF88 [Hirschia baltica ATCC 49814] Length = 184 Score = 189 bits (480), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 89/170 (52%), Positives = 123/170 (72%), Gaps = 2/170 (1%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 E+IALFIDGANLY+++K L ++DYR+LL FR + ++RAYYYT ++ +++SP+ P Sbjct: 7 ERIALFIDGANLYSAAKTLNVELDYRRLLSEFRKKGRLLRAYYYTALI--ENEEYSPIRP 64 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125 L+DWL YNG+ VV K AKEFT+ GR+RVK MDVE+AVD ++ L+H ++FSGDG Sbjct: 65 LVDWLQYNGYNVVTKPAKEFTDAAGRRRVKGDMDVEIAVDMLTLADKLDHAILFSGDGDL 124 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 T LV ALQ + +V++VS+V + P M SD LRR AD F+DL+ L I R Sbjct: 125 TVLVKALQNRGLRVSVVSSVKTQPPMISDDLRRSADNFIDLSDLVKIIGR 174 >gi|310815107|ref|YP_003963071.1| hypothetical protein EIO_0609 [Ketogulonicigenium vulgare Y25] gi|308753842|gb|ADO41771.1| conserved hypothetical protein [Ketogulonicigenium vulgare Y25] Length = 196 Score = 185 bits (470), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 95/182 (52%), Positives = 134/182 (73%), Gaps = 2/182 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E+IALFIDGANLYA+SK+LGFDIDY+ L F R +IRA+YYT ++ + +++ Sbjct: 1 MFYRDERIALFIDGANLYAASKSLGFDIDYKLLRSEFMRRGRLIRAFYYTALLEN--EEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNGF + K AKEF + GR+++K +MD+EL VDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLHYNGFSMRTKPAKEFQDAQGRRKIKGNMDIELTVDAMELAPHVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F L+ ALQR+ +V++VSTV S P M +D+LRRQAD F++L L++ + R P D Sbjct: 119 GDGDFRPLIEALQRRGVRVSVVSTVRSQPPMIADELRRQADNFIELDELRDVLGRPPRPD 178 Query: 181 KK 182 + Sbjct: 179 AR 180 >gi|144899867|emb|CAM76731.1| protein containing DUF88 [Magnetospirillum gryphiswaldense MSR-1] Length = 193 Score = 184 bits (468), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 93/170 (54%), Positives = 131/170 (77%), Gaps = 2/170 (1%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 E++ LFIDG+NLYA++KALGFDIDY++LL F ++ +IRA+YYT +V D Q++SP+ P Sbjct: 12 ERVGLFIDGSNLYAAAKALGFDIDYKRLLDHFATKGRLIRAFYYTALVED--QEYSPIRP 69 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125 L+DWL YNG+ +V K KEFT+ GR+++K +MD+ELA+D E + L+H+V+FSGDG F Sbjct: 70 LVDWLDYNGYTMVTKPTKEFTDAAGRRKIKGNMDIELAIDVMEMAPHLDHVVLFSGDGDF 129 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 LV A+QRK +VT+VSTV S P M +D+LRRQAD F++L L++ I R Sbjct: 130 RRLVEAIQRKGVRVTVVSTVRSQPPMVADELRRQADSFLELLDLESIIGR 179 >gi|114800400|ref|YP_759598.1| hypothetical protein HNE_0871 [Hyphomonas neptunium ATCC 15444] gi|114740574|gb|ABI78699.1| conserved hypothetical protein [Hyphomonas neptunium ATCC 15444] Length = 189 Score = 184 bits (466), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 88/170 (51%), Positives = 127/170 (74%), Gaps = 2/170 (1%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 E++ALFIDGANLY++++A+G +ID+RKLLK F+SR ++RA YYT +V ++SP+ P Sbjct: 7 ERLALFIDGANLYSAARAVGLEIDFRKLLKEFQSRGRLVRASYYTALV--ESDEYSPIRP 64 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125 L+DWL YNGF VV K A+EF + GRKRV+ +MDVELAVD E + +H+V+FSG+G F Sbjct: 65 LVDWLAYNGFNVVKKPAREFVDREGRKRVRGNMDVELAVDMLEAAAYCDHIVLFSGNGDF 124 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 LV A++ + +V++VST+ + P M SD LRR+AD F++L L + +AR Sbjct: 125 RRLVEAVKARGVRVSVVSTMNATPPMISDDLRREADTFIELTDLGDLVAR 174 >gi|304321225|ref|YP_003854868.1| hypothetical protein PB2503_08354 [Parvularcula bermudensis HTCC2503] gi|303300127|gb|ADM09726.1| hypothetical protein PB2503_08354 [Parvularcula bermudensis HTCC2503] Length = 206 Score = 184 bits (466), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 84/174 (48%), Positives = 125/174 (71%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 DP +K A+FIDGANLY +++ LGFDIDY++LL+ R+ ++RAYYYT + + EQ +S Sbjct: 3 LDPDDKTAIFIDGANLYKTARNLGFDIDYKRLLQKTRAETRLVRAYYYTAMPEEREQDYS 62 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 PL PL+DWL YNG+ ++ K A+EFT++ GRKR + S+D++LA+D E ++ ++ LV+F+G Sbjct: 63 PLRPLVDWLDYNGYTMMTKAAREFTDSQGRKRFRGSVDIDLALDFVEMADKVDCLVLFTG 122 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 +G F +A Q + +V VST + P MASD +RRQAD F+DL L++ I R Sbjct: 123 NGDFRPAIAKAQSRGCRVICVSTTATQPPMASDDIRRQADQFVDLTSLEDVIGR 176 >gi|209542561|ref|YP_002274790.1| hypothetical protein Gdia_0379 [Gluconacetobacter diazotrophicus PAl 5] gi|209530238|gb|ACI50175.1| protein of unknown function DUF88 [Gluconacetobacter diazotrophicus PAl 5] Length = 203 Score = 184 bits (466), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 83/174 (47%), Positives = 125/174 (71%), Gaps = 2/174 (1%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 F P E++ LFIDGA+LY++S+ LGFD+DYR LL FRS+ VIRAYYY+ ++ +++S Sbjct: 3 FQPNERVCLFIDGASLYSASRHLGFDVDYRNLLTFFRSKCHVIRAYYYSAIL--ESEEYS 60 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 PL PL DWL YNG+ +V K A+EF ++ GR+RVK +MD+ELAVD E + ++H V+FSG Sbjct: 61 PLKPLTDWLVYNGYFLVTKTAREFVDHNGRRRVKGNMDIELAVDMMEMAPRIDHAVLFSG 120 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 D F L+ +QR+ + +++S++ + P + D+LRRQAD F++LA + + R Sbjct: 121 DADFRRLLETVQRQGVRTSVISSIRTSPPLIGDELRRQADQFIELADIAPQFTR 174 >gi|162147943|ref|YP_001602404.1| hypothetical protein GDI_2159 [Gluconacetobacter diazotrophicus PAl 5] gi|161786520|emb|CAP56102.1| conserved hypothetical protein [Gluconacetobacter diazotrophicus PAl 5] Length = 210 Score = 183 bits (465), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 83/174 (47%), Positives = 125/174 (71%), Gaps = 2/174 (1%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 F P E++ LFIDGA+LY++S+ LGFD+DYR LL FRS+ VIRAYYY+ ++ +++S Sbjct: 10 FQPNERVCLFIDGASLYSASRHLGFDVDYRNLLTFFRSKCHVIRAYYYSAIL--ESEEYS 67 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 PL PL DWL YNG+ +V K A+EF ++ GR+RVK +MD+ELAVD E + ++H V+FSG Sbjct: 68 PLKPLTDWLVYNGYFLVTKTAREFVDHNGRRRVKGNMDIELAVDMMEMAPRIDHAVLFSG 127 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 D F L+ +QR+ + +++S++ + P + D+LRRQAD F++LA + + R Sbjct: 128 DADFRRLLETVQRQGVRTSVISSIRTSPPLIGDELRRQADQFIELADIAPQFTR 181 >gi|296115034|ref|ZP_06833676.1| hypothetical protein GXY_04609 [Gluconacetobacter hansenii ATCC 23769] gi|295978371|gb|EFG85107.1| hypothetical protein GXY_04609 [Gluconacetobacter hansenii ATCC 23769] Length = 204 Score = 183 bits (464), Expect = 9e-45, Method: Compositional matrix adjust. Identities = 83/180 (46%), Positives = 131/180 (72%), Gaps = 2/180 (1%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 F P+E++ LFIDG +LY++S+ LGF++DYRKLL FRS++ V+RAYYY+ V+ +++S Sbjct: 3 FQPQERLCLFIDGTSLYSASRNLGFEVDYRKLLSFFRSKSNVLRAYYYSAVLE--TEEYS 60 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 PL PL DWL YNG+ +V K A+E+T++ GR+RVK +MD+ELAVD E + ++H V+FSG Sbjct: 61 PLKPLTDWLVYNGYFLVTKTAREYTDHTGRRRVKGNMDIELAVDMLEMAPRIDHAVLFSG 120 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 D L+ A+QR+ + T+++++ + P + D+LRRQAD F++LA + + R E++ Sbjct: 121 DADSRRLLEAVQRQGVRTTVIASIKTSPPLIGDELRRQADQFIELADIASHFTRRQIENR 180 >gi|114570128|ref|YP_756808.1| hypothetical protein Mmar10_1578 [Maricaulis maris MCS10] gi|114340590|gb|ABI65870.1| protein of unknown function DUF88 [Maricaulis maris MCS10] Length = 179 Score = 182 bits (462), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 87/176 (49%), Positives = 130/176 (73%), Gaps = 2/176 (1%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 F P E+I LFIDGANL++++KAL FDID+++LL+ FR R +IRA YYT ++ ++++ Sbjct: 3 FYPDERIGLFIDGANLFSTTKALDFDIDFKRLLEEFRKRGKLIRANYYTALL--EHEEYN 60 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 PL PL+DWL YNGF V+ K AKE+T++ GR+R+K MD+ELAVD E + L+H+++F+G Sbjct: 61 PLRPLVDWLDYNGFSVITKPAKEYTDDHGRRRIKGDMDIELAVDMLEAATYLDHIILFTG 120 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 DG F +AA + K ++++VS++ + PSM SD LRR+AD F++L L+ I R P Sbjct: 121 DGDFRYALAAARAKGARISVVSSLKTSPSMISDDLRREADAFIELDDLRAMIGRAP 176 >gi|117925174|ref|YP_865791.1| hypothetical protein Mmc1_1877 [Magnetococcus sp. MC-1] gi|117608930|gb|ABK44385.1| protein of unknown function DUF88 [Magnetococcus sp. MC-1] Length = 194 Score = 181 bits (458), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 87/177 (49%), Positives = 130/177 (73%), Gaps = 3/177 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 +F E++ +FIDG+NLYA+ ++LGFD DY+KLL+ FRS+A +IRAYY+T + GD +Q++ Sbjct: 10 IFRQDERVMVFIDGSNLYAAIRSLGFDFDYKKLLRYFRSQANLIRAYYFTAL-GD-DQEY 67 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTEN-CGRKRVKSSMDVELAVDAFEQSEGLEHLVIF 119 SP+ PL+DWL YNG+ VV K KE+ + G KR K +MD+E+AVD + + +H V+F Sbjct: 68 SPIRPLVDWLAYNGYAVVTKPIKEYVDPVTGHKRTKGNMDIEIAVDMMKLAPYYDHAVLF 127 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 SGDG F ++V Q + K VT+VS++++ P M +D+LRRQADYF++L +K + RD Sbjct: 128 SGDGDFRSVVEVAQGQGKVVTVVSSLMTQPPMIADELRRQADYFIELNRIKEHLQRD 184 >gi|330993366|ref|ZP_08317301.1| hypothetical protein SXCC_03264 [Gluconacetobacter sp. SXCC-1] gi|329759396|gb|EGG75905.1| hypothetical protein SXCC_03264 [Gluconacetobacter sp. SXCC-1] Length = 202 Score = 179 bits (455), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 81/174 (46%), Positives = 126/174 (72%), Gaps = 2/174 (1%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 F P+E++ LFIDG +LY++S+ LGF++DYRKLL+ FR+++ V+RAYYY+ V+ +++S Sbjct: 3 FQPQERLCLFIDGTSLYSASRNLGFEVDYRKLLQFFRAKSNVLRAYYYSAVLD--TEEYS 60 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 PL PL DWL YNG+ +V K A+EF ++ GR+RV+ +MDVEL VD E + ++H V+FSG Sbjct: 61 PLKPLTDWLVYNGYTLVTKNAREFIDHNGRRRVRGNMDVELTVDMMEMAPHIDHAVLFSG 120 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 D F L+ ++QR+ + T+V ++ + P + D+LRRQAD F++LA + R Sbjct: 121 DSDFRRLLESVQRQGVRTTVVGSIKTTPPLIGDELRRQADQFIELADISANFMR 174 >gi|258541738|ref|YP_003187171.1| hypothetical protein APA01_06420 [Acetobacter pasteurianus IFO 3283-01] gi|256632816|dbj|BAH98791.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01] gi|256635873|dbj|BAI01842.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-03] gi|256638928|dbj|BAI04890.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-07] gi|256641982|dbj|BAI07937.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-22] gi|256645037|dbj|BAI10985.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-26] gi|256648092|dbj|BAI14033.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-32] gi|256651145|dbj|BAI17079.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654136|dbj|BAI20063.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-12] Length = 207 Score = 178 bits (452), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 81/177 (45%), Positives = 125/177 (70%), Gaps = 2/177 (1%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 EK LFIDG++LY++S++LGFD+DY+KLL F ++ +IRAYYY ++ + +SPL P Sbjct: 7 EKTCLFIDGSSLYSTSRSLGFDVDYKKLLDFFAAKTHIIRAYYYAAILD--TEDYSPLKP 64 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125 L DWL YNG+ +V K A+EFT++ G++RVK +MD+E+AVD E + ++H ++FSGD F Sbjct: 65 LTDWLSYNGYFLVTKPAREFTDSTGKRRVKGNMDIEIAVDMMEMAPHIDHAILFSGDSDF 124 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182 +V A+QR+ +V++VS++ S P + D LRRQAD F++L+ L R E+ + Sbjct: 125 RRVVEAVQRQGTRVSVVSSMRSTPPLIGDDLRRQADQFLELSALAGNFTRRQTENPR 181 >gi|329114476|ref|ZP_08243238.1| Hypothetical protein APO_1273 [Acetobacter pomorum DM001] gi|326696552|gb|EGE48231.1| Hypothetical protein APO_1273 [Acetobacter pomorum DM001] Length = 207 Score = 178 bits (452), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 81/177 (45%), Positives = 125/177 (70%), Gaps = 2/177 (1%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 EK LFIDG++LY++S++LGFD+DY+KLL F ++ +IRAYYY ++ + +SPL P Sbjct: 7 EKTCLFIDGSSLYSTSRSLGFDVDYKKLLDFFAAKTHIIRAYYYAAILD--TEDYSPLKP 64 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125 L DWL YNG+ +V K A+EFT++ G++RVK +MD+E+AVD E + ++H ++FSGD F Sbjct: 65 LTDWLSYNGYFLVTKPAREFTDSTGKRRVKGNMDIEIAVDMLEMAPHIDHAILFSGDSDF 124 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182 +V A+QR+ +V++VS++ S P + D LRRQAD F++L+ L R E+ + Sbjct: 125 RRVVEAVQRQGTRVSVVSSMRSTPPLIGDDLRRQADQFLELSALAGNFTRRQTENPR 181 >gi|329890088|ref|ZP_08268431.1| hypothetical protein BDIM_17840 [Brevundimonas diminuta ATCC 11568] gi|328845389|gb|EGF94953.1| hypothetical protein BDIM_17840 [Brevundimonas diminuta ATCC 11568] Length = 193 Score = 178 bits (452), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 88/172 (51%), Positives = 119/172 (69%), Gaps = 2/172 (1%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 P ++IALFIDGANLY++++AL D+D++KL F +IRAYYYT ++ ++FSP+ Sbjct: 5 PDDRIALFIDGANLYSAARALNCDLDFKKLSTWFVGEGRLIRAYYYTAII--EGEEFSPV 62 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 PL+DWL YNGF VV K K FT+ G R K +MD+E+AVD E + L+ V+FSGDG Sbjct: 63 RPLVDWLDYNGFTVVTKPVKRFTDAQGHSRTKGNMDMEIAVDMLELAPRLDQAVLFSGDG 122 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 F +V ALQ K +VT+VSTV S P SD LRRQAD F+DLA + N++ + Sbjct: 123 DFRRVVQALQAKGVRVTVVSTVKSQPPQISDDLRRQADAFVDLADIMNQVGK 174 >gi|254418577|ref|ZP_05032301.1| conserved hypothetical protein [Brevundimonas sp. BAL3] gi|196184754|gb|EDX79730.1| conserved hypothetical protein [Brevundimonas sp. BAL3] Length = 180 Score = 177 bits (449), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 86/175 (49%), Positives = 122/175 (69%), Gaps = 2/175 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF +++A+FIDG+NLY++++AL D+D++++L FR ++I+ RAYYYT VV ++F Sbjct: 1 MFHSTDRLAIFIDGSNLYSAARALQHDMDFKRMLDWFREKSILTRAYYYTAVV--EGEEF 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWL YNGF VV K K FT+ G R+K +MD+E+AVD E + L+H V+FS Sbjct: 59 SPVKPLVDWLDYNGFSVVTKPVKRFTDGQGHSRIKGNMDIEIAVDMLELAPRLDHAVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 GDG F LV A+Q +VT+VST + P +D+LRRQAD F+DL L E R Sbjct: 119 GDGDFRRLVQAVQALGVRVTVVSTQKTQPPHIADELRRQADAFLDLNDLMAEFCR 173 >gi|218514126|ref|ZP_03510966.1| hypothetical protein Retl8_10672 [Rhizobium etli 8C-3] Length = 149 Score = 177 bits (448), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 80/135 (59%), Positives = 108/135 (80%), Gaps = 2/135 (1%) Query: 45 RAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAV 104 RAYYYT ++ D Q++S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+ELA+ Sbjct: 1 RAYYYTALIED--QEYSSIRPLIDWLDYNGYKVVTKPAKEFTDSMGRRKIKGNMDIELAI 58 Query: 105 DAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 DA EQSE ++HLVIFSGDG FT LV ALQR+ +KV+++ST+ + P M +D LRRQAD+F+ Sbjct: 59 DAMEQSETVDHLVIFSGDGDFTNLVEALQRRGRKVSVISTMATQPPMIADDLRRQADHFI 118 Query: 165 DLAYLKNEIARDPDE 179 DL LK EI RDP E Sbjct: 119 DLLSLKAEIGRDPSE 133 >gi|6136304|gb|AAF04325.1| unknown [Bradyrhizobium japonicum] Length = 149 Score = 174 bits (442), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 83/150 (55%), Positives = 113/150 (75%), Gaps = 7/150 (4%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 P KIALFIDGANLYA++K LGFDIDY++LLK F+SR ++RA+YYT ++ D Q++S + Sbjct: 5 PTNKIALFIDGANLYATAKTLGFDIDYKRLLKEFQSRGTLLRAFYYTAIIED--QEYSSI 62 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 PL+DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++ +V+FSGDG Sbjct: 63 RPLIDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHIDQMVLFSGDG 122 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMAS 153 F +LV A+QR+ +VT+ S PS AS Sbjct: 123 DFRSLVEAVQRRGVRVTV-----SRPSPAS 147 >gi|312114148|ref|YP_004011744.1| hypothetical protein Rvan_1386 [Rhodomicrobium vannielii ATCC 17100] gi|311219277|gb|ADP70645.1| hypothetical protein Rvan_1386 [Rhodomicrobium vannielii ATCC 17100] Length = 178 Score = 170 bits (431), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 82/172 (47%), Positives = 117/172 (68%), Gaps = 2/172 (1%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 E++ LF+DG NL+A+++ LGF IDY LL+ FR+ +IR YY + D SPL Sbjct: 7 ERLGLFLDGPNLFAAARTLGFMIDYGSLLRLFRNSGQLIRVNYYLPIADDFAT--SPLRG 64 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125 + DWL YNG+ V+ K AK++ + GR+++KS MD+ELAVDA + L+H+V+FSG G F Sbjct: 65 VSDWLQYNGYTVITKPAKDYVDANGRRKIKSGMDIELAVDALSLANSLDHIVLFSGLGDF 124 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 LV+ALQR+ ++VT+VST+ + P + +D LRR AD F+DLA L I R P Sbjct: 125 CGLVSALQRRGRRVTVVSTIRTQPPIVADDLRRMADQFIDLADLAPMIGRAP 176 >gi|240141795|ref|YP_002966303.1| hypothetical protein MexAM1_META2p0024 [Methylobacterium extorquens AM1] gi|240011737|gb|ACS42962.1| hypothetical protein DUF88 [Methylobacterium extorquens AM1] Length = 185 Score = 170 bits (431), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 85/169 (50%), Positives = 127/169 (75%), Gaps = 3/169 (1%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 + A+FIDGANLY+++KA+GFDIDY+KLL ++ R ++R YYT + D E +S L PL Sbjct: 5 RTAVFIDGANLYSTTKAIGFDIDYKKLLAHYK-RDGLLRINYYTALYDDGE--YSSLRPL 61 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126 LDWL YNG++V++K AKE+T++ GR++ K ++D+E+AVDA E + ++ +V+FSGDG F Sbjct: 62 LDWLDYNGYRVISKPAKEWTDSAGRRKTKGNLDIEIAVDALELAPHIDRMVLFSGDGDFR 121 Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 LV A+QR+ +V +VST+ + P+M SD+LRRQAD F+DLA + I + Sbjct: 122 YLVEAMQRRGVRVVVVSTIQTQPAMVSDELRRQADEFVDLAKMMETIGQ 170 >gi|58040236|ref|YP_192200.1| hypothetical protein GOX1805 [Gluconobacter oxydans 621H] gi|58002650|gb|AAW61544.1| Hypothetical protein GOX1805 [Gluconobacter oxydans 621H] Length = 202 Score = 162 bits (409), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 80/171 (46%), Positives = 114/171 (66%), Gaps = 4/171 (2%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ-FSPLH 64 E+ ALFIDGA+L+ +++ LGF++D+R L F S+ + RA+YY + PE +SPL Sbjct: 7 ERTALFIDGASLHHAARNLGFEVDFRSLRNLFESQCLFQRAFYYAAM---PETDDYSPLR 63 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 PL DWL YNG+ +V K A+EFT++ GR+R+K +MDVEL VD EQ+ L+H VI SGD Sbjct: 64 PLTDWLAYNGYHLVLKNAREFTDHSGRRRIKGNMDVELTVDLLEQASRLDHAVIVSGDSD 123 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 V A+Q + +VT++S++ S P M D LRRQAD F++LA + R Sbjct: 124 LRRAVEAVQARGVRVTVISSMRSTPLMIGDDLRRQADLFVELADIAPSFTR 174 >gi|294084108|ref|YP_003550866.1| hypothetical protein SAR116_0539 [Candidatus Puniceispirillum marinum IMCC1322] gi|292663681|gb|ADE38782.1| Protein of unknown function DUF88 [Candidatus Puniceispirillum marinum IMCC1322] Length = 183 Score = 159 bits (403), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 77/171 (45%), Positives = 117/171 (68%), Gaps = 3/171 (1%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 +K ALFIDG+N YA+++AL DID+ ++ F +IRAYYYT + D Q+FS L P Sbjct: 2 DKTALFIDGSNFYAAARALNLDIDFARMRTHFAKDTNLIRAYYYTAIPED--QEFSSLRP 59 Query: 66 LLDWLHYNGFQVVAKVAKEFT-ENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 L+DWL YNG+ VV+K+ +EF E GR+R+K +MD+ELA+D + + ++H ++FSGDG Sbjct: 60 LVDWLDYNGYAVVSKLTREFIDEETGRRRLKGNMDMELALDMLKLAPHIDHAILFSGDGD 119 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 F L+ +Q + T+VST + P M +DQLRR AD ++D+A + +I++ Sbjct: 120 FCRLLEDVQALGVRTTVVSTNKTSPPMVADQLRRMADVYIDMADIAADISK 170 >gi|240139942|ref|YP_002964419.1| hypothetical protein MexAM1_META1p3405 [Methylobacterium extorquens AM1] gi|240009916|gb|ACS41142.1| Conserved hypothetical protein (DUF88) [Methylobacterium extorquens AM1] Length = 168 Score = 151 bits (382), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 64/123 (52%), Positives = 97/123 (78%) Query: 57 EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHL 116 +Q++S + PL+DWL YNG++VV K KEFT++ GR+++K +MD+ELA+DA E + ++H+ Sbjct: 4 DQEYSSIRPLIDWLDYNGYRVVTKPVKEFTDSAGRRKIKGNMDIELAIDALELAPHIDHM 63 Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 V+FSGDG F +LV A+QR+ +V++VST+ + P+M +D LRRQAD F+DLA+L + I RD Sbjct: 64 VLFSGDGDFRSLVEAIQRRGVRVSVVSTIQTQPAMIADDLRRQADEFIDLAHLASRIGRD 123 Query: 177 PDE 179 P E Sbjct: 124 PSE 126 >gi|254461881|ref|ZP_05075297.1| hypothetical protein RB2083_2472 [Rhodobacterales bacterium HTCC2083] gi|206678470|gb|EDZ42957.1| hypothetical protein RB2083_2472 [Rhodobacteraceae bacterium HTCC2083] Length = 200 Score = 151 bits (382), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 73/175 (41%), Positives = 115/175 (65%), Gaps = 2/175 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E+IA+FIDG +L+A SKALGFDID++ K F R + + Y+TT+V ++F Sbjct: 1 MFYKDERIAVFIDGKSLFACSKALGFDIDFKLFRKEFSQRGKLNKLSYFTTLVD--SEEF 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG+ V K KE+ + GR++VK ++ VE+ + + ++H++I + Sbjct: 59 SSVKPLVDWLSYNGYNTVTKPVKEYVDTAGRRKVKGNISVEMTIAVLDMVPFVDHIIIVT 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 GD F LV A+Q++ +V++VS++ P M SD LRRQAD F++L L++ I + Sbjct: 119 GDKDFKPLVEAVQQRGTRVSVVSSIRVQPPMLSDDLRRQADNFIELDELRSVIEK 173 >gi|193782651|ref|NP_435936.2| hypothetical protein SMa1264 [Sinorhizobium meliloti 1021] gi|46403700|gb|AAS92906.1| hypothetical protein [Sinorhizobium meliloti] gi|193073107|gb|AAK65348.2| Conserved hypothetical protein [Sinorhizobium meliloti 1021] Length = 177 Score = 149 bits (376), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 73/145 (50%), Positives = 103/145 (71%), Gaps = 2/145 (1%) Query: 35 KAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRV 94 + F S I YY +V D Q+ + L+DWL YNG+Q+V K +EFT+ GR+R+ Sbjct: 18 RLFGSAPICCGGNYYAPLVED--QETPTIRLLIDWLDYNGYQMVTKPIREFTDTLGRRRI 75 Query: 95 KSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASD 154 K +MD++LA+DA E ++ +HLVIFSGDG FT++VAALQRK +VT+VST+ + P M S Sbjct: 76 KGNMDIDLAIDAIELAKTADHLVIFSGDGNFTSVVAALQRKGCRVTVVSTMATRPPMISG 135 Query: 155 QLRRQADYFMDLAYLKNEIARDPDE 179 +LRR+AD+F+DLA L+ EIAR+ E Sbjct: 136 ELRREADHFIDLAKLRGEIAREHAE 160 >gi|254510985|ref|ZP_05123052.1| hypothetical protein RKLH11_1520 [Rhodobacteraceae bacterium KLH11] gi|221534696|gb|EEE37684.1| hypothetical protein RKLH11_1520 [Rhodobacteraceae bacterium KLH11] Length = 183 Score = 143 bits (361), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 75/178 (42%), Positives = 115/178 (64%), Gaps = 3/178 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E A+F+DG NL+ S+KALGFD+DY +L + ++RA Y+T ++ ++ Sbjct: 3 MFHQNETTAIFVDGYNLHHSAKALGFDVDYERLKSMVEKQCHLLRATYFTMLI--ERDEY 60 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 PL+D+L YNG+ V AK A+EF GR R K ++V+LA+ A + + H V+F+ Sbjct: 61 IATRPLVDFLQYNGWTVTAKDAREFVHGDGRSRFKGRIEVDLALAAARITPHINHAVLFT 120 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178 G F LV LQ + +V++VST+ ++P +ASDQLRR+AD F++LA +++ IAR PD Sbjct: 121 GSQDFCPLVEYLQDQGVRVSVVSTIKTEPILASDQLRRKADKFIELADIRDVIAR-PD 177 >gi|94985935|ref|YP_605299.1| hypothetical protein Dgeo_1835 [Deinococcus geothermalis DSM 11300] gi|94556216|gb|ABF46130.1| protein of unknown function DUF88 [Deinococcus geothermalis DSM 11300] Length = 194 Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 62/173 (35%), Positives = 102/173 (58%), Gaps = 13/173 (7%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTV---VGDPEQQFSP 62 E+IALFIDGAN+YA++K LG++ D+RK+L+ FRS + A+YYT V + D +++F Sbjct: 3 ERIALFIDGANVYAAAKRLGWNFDHRKMLEFFRSYGSLHNAFYYTAVPLPMDDKQKRF-- 60 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122 +D L Y G+ V + +E T+ G ++S+D+E+ D S+ + V+ +GD Sbjct: 61 ----IDALTYMGYTVRTRPLRESTDEHGDTHRRASLDIEIVTDLLTTSDRFDTAVLLTGD 116 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 G F V L+ + K+V + S P M S +LR AD ++DL ++ ++ R Sbjct: 117 GDFERPVEVLRARGKRVVVASI----PEMTSYELRNAADEYVDLGAIREQVER 165 >gi|114766684|ref|ZP_01445623.1| hypothetical protein 1100011001297_R2601_11634 [Pelagibaca bermudensis HTCC2601] gi|114541074|gb|EAU44129.1| hypothetical protein R2601_11634 [Roseovarius sp. HTCC2601] Length = 117 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 52/103 (50%), Positives = 76/103 (73%) Query: 77 VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKV 136 +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FSGDG F LV +LQR+ Sbjct: 1 MVTKPAKEYTDSQGRRKVKGNMDIELTVDAMELAPRVDHIVLFSGDGDFRPLVESLQRQG 60 Query: 137 KKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 +V++VST+ S P M +D+LRRQAD F++L L+ I R P E Sbjct: 61 VRVSVVSTIRSQPPMIADELRRQADNFIELDELREVIGRPPRE 103 >gi|15807658|ref|NP_295720.1| hypothetical protein DR_1997m [Deinococcus radiodurans R1] gi|970086|dbj|BAA09936.1| ORF1 [Deinococcus radiodurans] Length = 200 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 64/173 (36%), Positives = 99/173 (57%), Gaps = 13/173 (7%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTV---VGDPEQQFSP 62 E+IALFIDGAN+YA++K LG++ D+RK+L+ F + A+YYT V V D +++F Sbjct: 2 ERIALFIDGANVYAAAKRLGWNFDHRKILEHFAGLGALYNAFYYTAVPWPVDDKQKRF-- 59 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122 +D L Y G+ V + +E T+ G ++S+D+EL D + V+ SGD Sbjct: 60 ----VDALTYMGYTVRTRPLRENTDENGDTSRRASLDIELVTDLLTTESRYDVAVLLSGD 115 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 G F V L+ + KKV + S P M S +LR AD ++DLA ++ ++ R Sbjct: 116 GDFERPVEVLRARGKKVIVASI----PEMTSAELRNAADEYVDLASIREQVER 164 >gi|23009928|ref|ZP_00050797.1| COG1432: Uncharacterized conserved protein [Magnetospirillum magnetotacticum MS-1] Length = 110 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 48/94 (51%), Positives = 74/94 (78%) Query: 78 VAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVK 137 + K KEFT++ GR+++K +MD+ELA+DA E + ++H+V+FSGDG F +LV A+QR+ Sbjct: 1 MTKPVKEFTDSAGRRKIKGNMDIELAIDALELAPYIDHMVLFSGDGDFRSLVEAIQRRGV 60 Query: 138 KVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 +V++VST+ + P+M +D LRRQAD F+DLA+L N Sbjct: 61 RVSVVSTIQTQPAMIADDLRRQADEFVDLAHLAN 94 >gi|6459785|gb|AAF11547.1|AE002037_8 conserved hypothetical protein [Deinococcus radiodurans R1] Length = 263 Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 64/173 (36%), Positives = 99/173 (57%), Gaps = 13/173 (7%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTV---VGDPEQQFSP 62 E+IALFIDGAN+YA++K LG++ D+RK+L+ F + A+YYT V V D +++F Sbjct: 65 ERIALFIDGANVYAAAKRLGWNFDHRKILEHFAGLGALYNAFYYTAVPWPVDDKQKRF-- 122 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122 +D L Y G+ V + +E T+ G ++S+D+EL D + V+ SGD Sbjct: 123 ----VDALTYMGYTVRTRPLRENTDENGDTSRRASLDIELVTDLLTTESRYDVAVLLSGD 178 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 G F V L+ + KKV + S P M S +LR AD ++DLA ++ ++ R Sbjct: 179 GDFERPVEVLRARGKKVIVASI----PEMTSAELRNAADEYVDLASIREQVER 227 >gi|86607727|ref|YP_476489.1| hypothetical protein CYB_0228 [Synechococcus sp. JA-2-3B'a(2-13)] gi|86556269|gb|ABD01226.1| conserved hypothetical protein [Synechococcus sp. JA-2-3B'a(2-13)] Length = 200 Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 63/173 (36%), Positives = 100/173 (57%), Gaps = 12/173 (6%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 D R ++A+FIDG+NL+ ++ LG +IDY +LLK R+ ++R+++YT V + E+Q Sbjct: 18 DNRGRVAIFIDGSNLFYAALQLGIEIDYTRLLKTLSGRSPLLRSFFYTGVDRNNEKQ--- 74 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122 L W+ NG++VV K + + G KR +++DVE+AVD E V+ SGD Sbjct: 75 -QGFLLWMRRNGYRVVTKELTQLPD--GSKR--ANLDVEIAVDMLSLVRWYETAVLVSGD 129 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 G V A+ + +V +VS SM SDQL AD ++DL +K++I + Sbjct: 130 GDLAYAVNAVSYQGARVEVVSL----RSMTSDQLINLADRYIDLESIKDQIKK 178 >gi|86605182|ref|YP_473945.1| hypothetical protein CYA_0464 [Synechococcus sp. JA-3-3Ab] gi|86553724|gb|ABC98682.1| conserved hypothetical protein [Synechococcus sp. JA-3-3Ab] Length = 198 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 62/173 (35%), Positives = 100/173 (57%), Gaps = 12/173 (6%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 D R ++A+FIDG+NL+ ++ +G +IDY +LLK R+ ++R+++YT V + E+Q Sbjct: 18 DDRGRVAIFIDGSNLFYAALQMGIEIDYTRLLKTLTGRSPLLRSFFYTGVDRNNEKQ--- 74 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122 L W+ NG++VV K + + G KR +++DVE+AVD E V+ SGD Sbjct: 75 -QGFLLWMRRNGYRVVTKELTQLPD--GSKR--ANLDVEIAVDMLSLVRWYETAVLVSGD 129 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 G V A+ + +V +VS SM SDQL AD ++DL +K++I + Sbjct: 130 GDLAYAVNAVSYQGARVEVVSLR----SMTSDQLINLADRYIDLESIKDQIKK 178 >gi|320335491|ref|YP_004172202.1| hypothetical protein Deima_2908 [Deinococcus maricopensis DSM 21211] gi|319756780|gb|ADV68537.1| Domain of unknown function DUF88 [Deinococcus maricopensis DSM 21211] Length = 192 Score = 101 bits (251), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 58/173 (33%), Positives = 98/173 (56%), Gaps = 13/173 (7%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTV---VGDPEQQFSP 62 E+I LFIDGAN+YA++K LG++ D+RK+L+ F + A+YYT V V D +++F Sbjct: 2 ERIGLFIDGANVYAAAKRLGWNFDHRKILEHFAGYGRLYNAFYYTAVPTPVDDKQKRF-- 59 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122 +D L Y G+ V K+ +E T+ G ++++D+ L D ++ + ++ +GD Sbjct: 60 ----IDALTYMGYTVRTKMLRENTDEHGDTHRRANLDILLVTDLLATADLYDTAILLTGD 115 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 G F V L+ K K+V + S P M S +LR AD ++D ++ ++ R Sbjct: 116 GDFERPVEVLRAKGKRVIVASI----PEMTSYELRNAADAYVDFKDIRGDVER 164 >gi|226356860|ref|YP_002786600.1| hypothetical protein Deide_18580 [Deinococcus deserti VCD115] gi|226318850|gb|ACO46846.1| Conserved hypothetical protein [Deinococcus deserti VCD115] Length = 197 Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 57/173 (32%), Positives = 99/173 (57%), Gaps = 13/173 (7%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTV---VGDPEQQFSP 62 E+IALFIDGAN+YA++K LG++ D+RK+L+ F ++ + A+YYT V + D +++F+ Sbjct: 2 ERIALFIDGANVYAAAKRLGWNFDHRKILEHFAAQGRLYNAFYYTAVPMPIDDKQKRFT- 60 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122 D L Y G+ V + +E T+ G ++++DVE+ D ++ + V+ +GD Sbjct: 61 -----DALTYMGYTVRTRPLRESTDEHGDTSRRANLDVEIVTDLLTTADRYDTAVLLTGD 115 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 G F V L+ + K+V + S M S +LR AD ++D ++ + R Sbjct: 116 GDFERPVEVLRARGKRVVVASIA----EMTSYELRNAADEYVDFKDIRVHVER 164 >gi|325282672|ref|YP_004255213.1| hypothetical protein Deipr_0426 [Deinococcus proteolyticus MRP] gi|324314481|gb|ADY25596.1| Domain of unknown function DUF88 [Deinococcus proteolyticus MRP] Length = 214 Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 56/173 (32%), Positives = 96/173 (55%), Gaps = 13/173 (7%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVG---DPEQQFSP 62 ++IALF+DGA++Y+++K LG++ D+RK+L+ FR R + A+YYT + D +++F+ Sbjct: 4 QRIALFVDGASIYSAAKRLGWNFDHRKVLEYFRERGRLHNAFYYTALPAQFDDKQKRFT- 62 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122 D L Y G+ V + +E + G ++S+D+EL D + + V+ SG Sbjct: 63 -----DALTYMGYTVRTQPLRETVDESGVSYRQTSLDIELVTDLLTGLDHFDAAVLMSGG 117 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 G F + L+ + K+ +VS P M S +LR AD ++DL L+ R Sbjct: 118 GGFERPLEVLRARGKRTVVVSI----PEMTSYELRNAADEYLDLRDLRQRFER 166 >gi|149913285|ref|ZP_01901818.1| hypothetical protein RAZWK3B_08291 [Roseobacter sp. AzwK-3b] gi|149812405|gb|EDM72234.1| hypothetical protein RAZWK3B_08291 [Roseobacter sp. AzwK-3b] Length = 186 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 58/174 (33%), Positives = 97/174 (55%), Gaps = 3/174 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M +K+A+ IDG L + LG IDYR+L F + + YY V D ++ Sbjct: 6 MLYSTDKLAILIDGQALTSLGFGLGMKIDYRRLKSRFARVSKLTTVKYYAIV--DADKVE 63 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 +P LLDWL YNG+Q+ K+A+ F + G RVK S+ +L+VD ++ ++H+++ Sbjct: 64 NPYVKLLDWLDYNGYQIHRKMARVFDDVDG-ARVKGSITADLSVDIIMMAKQVDHILLIG 122 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 G + + +R +VT++S++ ++ +D LRR D F++L L+NEIA Sbjct: 123 GHTDYCYAIQQAKRFGARVTLLSSLKAEGFRPADDLRRIVDDFIELEDLRNEIA 176 >gi|284052456|ref|ZP_06382666.1| hypothetical protein AplaP_13393 [Arthrospira platensis str. Paraca] gi|291571487|dbj|BAI93759.1| hypothetical protein [Arthrospira platensis NIES-39] Length = 205 Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 61/177 (34%), Positives = 99/177 (55%), Gaps = 12/177 (6%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 + + R ++A+FIDG+NL+ ++ LG +IDY KLL S + ++R+++YT V E+Q Sbjct: 18 ILENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTSGSRLLRSFFYTGVDRTNEKQ- 76 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 L W+ NG++VVAK + + G K K+++DVE+AVD + V+ S Sbjct: 77 ---QGFLLWMRRNGYRVVAKDLVQLPD--GSK--KANLDVEIAVDMIALVGAYDTAVLVS 129 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 GDG V + + +V ++S SM SD L AD ++DL +K+EI + P Sbjct: 130 GDGDLAYAVDCVSYRGVRVEVISL----RSMTSDSLINVADRYIDLEAIKDEIQKTP 182 >gi|16331574|ref|NP_442302.1| hypothetical protein slr0650 [Synechocystis sp. PCC 6803] gi|1001641|dbj|BAA10372.1| slr0650 [Synechocystis sp. PCC 6803] Length = 201 Score = 94.7 bits (234), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 59/177 (33%), Positives = 97/177 (54%), Gaps = 12/177 (6%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 + + R ++A+FIDG+NL+ ++ LG +IDY KLL + ++RA++YT V E+Q Sbjct: 16 LLENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLHCLTGGSRLLRAFFYTGVDRSNEKQ- 74 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 L W+ NG++V+AK + + G K K+++DVE+AVD + V+ S Sbjct: 75 ---QGFLLWMRRNGYRVIAKDLVQLPD--GSK--KANLDVEIAVDLMSLVGSYDTAVVVS 127 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 GDG A+ + ++ +VS SM SD L +D ++DL +K EI + P Sbjct: 128 GDGDLAYAADAVSYRGARIEVVSL----RSMTSDSLINVSDRYVDLDSIKEEIQKQP 180 >gi|56750416|ref|YP_171117.1| hypothetical protein syc0407_c [Synechococcus elongatus PCC 6301] gi|81299952|ref|YP_400160.1| hypothetical protein Synpcc7942_1143 [Synechococcus elongatus PCC 7942] gi|56685375|dbj|BAD78597.1| hypothetical protein [Synechococcus elongatus PCC 6301] gi|81168833|gb|ABB57173.1| conserved hypothetical protein [Synechococcus elongatus PCC 7942] Length = 198 Score = 94.0 bits (232), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 62/179 (34%), Positives = 99/179 (55%), Gaps = 12/179 (6%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 + + R +IA+FIDG+NL+ ++ LG +IDY KLL + + ++R+++YT V E+Q Sbjct: 16 ILENRGRIAIFIDGSNLFYAALQLGIEIDYTKLLACLTNGSRLLRSFFYTGVDRSNEKQ- 74 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 L W+ NG++VVAK + + G K K+++DVE+AVD + + V+ S Sbjct: 75 ---QGFLLWMRRNGYRVVAKDLIQLPD--GTK--KANLDVEIAVDMLALAGTYDTAVLVS 127 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG V + + +V +VS SM SD L AD ++DL LK I + P + Sbjct: 128 GDGDLAYAVEVVGYRGVRVEVVSL----RSMTSDNLINVADRYIDLESLKASIQKLPRQ 182 >gi|119487031|ref|ZP_01620903.1| hypothetical protein L8106_18981 [Lyngbya sp. PCC 8106] gi|119455960|gb|EAW37094.1| hypothetical protein L8106_18981 [Lyngbya sp. PCC 8106] Length = 205 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 60/177 (33%), Positives = 98/177 (55%), Gaps = 12/177 (6%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 + + R ++A+FIDG+NL+ ++ LG +IDY KLL + ++R+++YT V E+Q Sbjct: 16 VLENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTGGSRLLRSFFYTGVDRTNEKQ- 74 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 L W+ NG++V+AK + + G K K+++DVE+AVD + V+ S Sbjct: 75 ---QGFLLWMRRNGYRVIAKDLVQLPD--GSK--KANLDVEIAVDMLALVGSYDTAVLVS 127 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 GDG V + + +V +VS SM SD L AD ++DL +K EI ++P Sbjct: 128 GDGDLAYAVDCVSYRGVRVEVVSL----RSMTSDSLINVADRYIDLENVKEEIQKNP 180 >gi|119512208|ref|ZP_01631298.1| hypothetical protein N9414_13695 [Nodularia spumigena CCY9414] gi|119463174|gb|EAW44121.1| hypothetical protein N9414_13695 [Nodularia spumigena CCY9414] Length = 209 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 58/177 (32%), Positives = 100/177 (56%), Gaps = 12/177 (6%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 + + R ++A+FIDG+NL+ ++ LG +IDY KLL + ++R+++YT V E+Q Sbjct: 16 VLENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTGGSRLLRSFFYTGVDRTNEKQ- 74 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 L W+ NG++V+AK + + G K K+++DVE+AVD + + V+ S Sbjct: 75 ---QGFLLWMRRNGYRVIAKDLVQLPD--GSK--KANLDVEIAVDMMALVDSYDTAVLVS 127 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 GDG V ++ + +V +VS SM SD L +D ++DL +K +I ++P Sbjct: 128 GDGDLAYAVNSVSYRGVRVEVVSL----RSMTSDSLINVSDRYIDLEAIKEDIQKNP 180 >gi|220908708|ref|YP_002484019.1| hypothetical protein Cyan7425_3333 [Cyanothece sp. PCC 7425] gi|219865319|gb|ACL45658.1| protein of unknown function DUF88 [Cyanothece sp. PCC 7425] Length = 207 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 61/177 (34%), Positives = 99/177 (55%), Gaps = 12/177 (6%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 + + R ++A+FIDG+NL+ ++ LG +IDY KLL S + ++R+++YT V E+Q Sbjct: 15 VLENRGRVAIFIDGSNLFYAALQLGIEIDYSKLLCRLTSGSRLLRSFFYTGVDPTNEKQ- 73 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 L W+ NG++V+AK + + G K K+++DVE+AVD + V+ S Sbjct: 74 ---QGFLLWMRRNGYRVIAKDLVQLPD--GSK--KANLDVEIAVDMMSLVGSYDTGVLVS 126 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 GDG V A+ + +V +VS SM SD L AD ++DL +K +I + P Sbjct: 127 GDGDLAYAVDAVSYRGVRVEVVSL----RSMTSDSLINVADRYIDLDSIKEDIQKAP 179 >gi|298492951|ref|YP_003723128.1| hypothetical protein Aazo_4859 ['Nostoc azollae' 0708] gi|298234869|gb|ADI66005.1| protein of unknown function DUF88 ['Nostoc azollae' 0708] Length = 210 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 59/177 (33%), Positives = 99/177 (55%), Gaps = 12/177 (6%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 + + R ++A+FIDG+NL+ ++ LG +IDY KLL + ++RA++YT V E+Q Sbjct: 17 VLENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTGGSRLLRAFFYTGVDRTNEKQ- 75 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 L W+ NG++V+AK + + G K K+++DVE+AVD + + V+ S Sbjct: 76 ---QGFLLWMRRNGYRVIAKDLVQLPD--GSK--KANLDVEIAVDMMALVDSYDTAVLVS 128 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 GDG V ++ + +V +VS SM SD L +D ++DL +K +I + P Sbjct: 129 GDGDLAYAVNSVSYRGVRVEVVSL----RSMTSDSLINVSDRYIDLEAIKEDIQKTP 181 >gi|17227728|ref|NP_484276.1| hypothetical protein all0232 [Nostoc sp. PCC 7120] gi|75908934|ref|YP_323230.1| hypothetical protein Ava_2722 [Anabaena variabilis ATCC 29413] gi|17135210|dbj|BAB77756.1| all0232 [Nostoc sp. PCC 7120] gi|75702659|gb|ABA22335.1| Protein of unknown function DUF88 [Anabaena variabilis ATCC 29413] Length = 209 Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 59/177 (33%), Positives = 99/177 (55%), Gaps = 12/177 (6%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 + + R ++A+FIDG+NL+ ++ LG +IDY KLL + ++RA++YT V E+Q Sbjct: 16 VLENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTGGSRLLRAFFYTGVDRTNEKQ- 74 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 L W+ NG++V+AK + + G K K+++DVE+AVD + + V+ S Sbjct: 75 ---QGFLLWMRRNGYRVIAKDLVQLPD--GSK--KANLDVEIAVDMMALVDSYDTAVLVS 127 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 GDG V ++ + +V +VS SM SD L +D ++DL +K +I + P Sbjct: 128 GDGDLAYAVNSVSYRGVRVEVVSL----RSMTSDSLINVSDRYIDLEAIKEDIQKTP 180 >gi|218248715|ref|YP_002374086.1| hypothetical protein PCC8801_3991 [Cyanothece sp. PCC 8801] gi|257061778|ref|YP_003139666.1| hypothetical protein Cyan8802_4033 [Cyanothece sp. PCC 8802] gi|218169193|gb|ACK67930.1| protein of unknown function DUF88 [Cyanothece sp. PCC 8801] gi|256591944|gb|ACV02831.1| protein of unknown function DUF88 [Cyanothece sp. PCC 8802] Length = 226 Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 60/177 (33%), Positives = 97/177 (54%), Gaps = 12/177 (6%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 + + R ++A+FIDG+NL+ ++ LG +IDY KLL + ++RA++YT V E+Q Sbjct: 41 VLENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTGGSRLLRAFFYTGVDRTNEKQ- 99 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 L W+ NG++V+AK + + G K K+++DVE+AVD + VI S Sbjct: 100 ---QGFLLWMRRNGYRVIAKDLVQLPD--GSK--KANLDVEIAVDLMALVGSYDTAVIVS 152 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 GDG A+ + ++ +VS SM SD L AD ++DL +K +I + P Sbjct: 153 GDGDLAYAADAVSYRGSRIEVVSL----RSMTSDSLINVADRYIDLDQIKEDIQKSP 205 >gi|282896531|ref|ZP_06304551.1| Protein of unknown function DUF88 [Raphidiopsis brookii D9] gi|281198637|gb|EFA73518.1| Protein of unknown function DUF88 [Raphidiopsis brookii D9] Length = 248 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 58/177 (32%), Positives = 99/177 (55%), Gaps = 12/177 (6%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 + + R ++A+FIDG+NL+ ++ LG +IDY KLL + ++RA++YT V E+Q Sbjct: 55 VLENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTGGSRLLRAFFYTGVDRTNEKQ- 113 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 L W+ NG++V+AK + + G K K+++DVE+AVD + + V+ S Sbjct: 114 ---QGFLLWMRRNGYRVIAKDLVQLPD--GSK--KANLDVEIAVDMMALVDSYDTAVLVS 166 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 GDG V ++ + +V +VS SM SD L +D ++DL ++ +I + P Sbjct: 167 GDGDLAYAVNSVSYRGVRVEVVSL----RSMTSDSLINVSDRYIDLEAIREDIQKTP 219 >gi|37522591|ref|NP_925968.1| hypothetical protein gll3022 [Gloeobacter violaceus PCC 7421] gi|35213592|dbj|BAC90963.1| gll3022 [Gloeobacter violaceus PCC 7421] Length = 216 Score = 92.0 bits (227), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 59/176 (33%), Positives = 98/176 (55%), Gaps = 12/176 (6%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 R ++A+FIDG+NL+ ++ LG +IDY KLL + + ++R+++YT V E+Q Sbjct: 19 RGRVAIFIDGSNLFYAALQLGIEIDYTKLLNRLTNGSRLLRSFFYTGVDRANEKQ----Q 74 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 L W+ NG++V+ K + + G K K+++DVE+AVD + + ++ SGDG Sbjct: 75 GFLLWMRRNGYRVITKDLVQLPD--GSK--KANLDVEIAVDMLSLAGSYDTAILVSGDGD 130 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 V A K +V +VS SM SD L AD ++DL +K +I + P ++ Sbjct: 131 LAYAVNAASYKGVRVEVVSL----RSMTSDYLINVADRYIDLEQIKEDIQKAPRQN 182 >gi|282900793|ref|ZP_06308733.1| protein of unknown function DUF88 [Cylindrospermopsis raciborskii CS-505] gi|281194323|gb|EFA69280.1| protein of unknown function DUF88 [Cylindrospermopsis raciborskii CS-505] Length = 251 Score = 92.0 bits (227), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 58/177 (32%), Positives = 99/177 (55%), Gaps = 12/177 (6%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 + + R ++A+FIDG+NL+ ++ LG +IDY KLL + ++RA++YT V E+Q Sbjct: 58 VLENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTGGSRLLRAFFYTGVDRTNEKQ- 116 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 L W+ NG++V+AK + + G K K+++DVE+AVD + + V+ S Sbjct: 117 ---QGFLLWMRRNGYRVIAKDLVQLPD--GSK--KANLDVEIAVDMMALVDSYDTAVLVS 169 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 GDG V ++ + +V +VS SM SD L +D ++DL ++ +I + P Sbjct: 170 GDGDLAYAVNSVSYRGVRVEVVSL----RSMTSDSLINVSDRYIDLEAIREDIQKTP 222 >gi|269837665|ref|YP_003319893.1| hypothetical protein Sthe_1637 [Sphaerobacter thermophilus DSM 20745] gi|269786928|gb|ACZ39071.1| protein of unknown function DUF88 [Sphaerobacter thermophilus DSM 20745] Length = 201 Score = 92.0 bits (227), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 59/161 (36%), Positives = 83/161 (51%), Gaps = 12/161 (7%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 +K+A+F D +NLY +++ LG IDY +LL + RAY Y V D P Sbjct: 8 DKVAVFFDMSNLYFAARDLGIKIDYTRLLDFIVGGRRLHRAYAYMAVAPDDNTAV----P 63 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125 L WL NGF+V+ K + +++ K +D+ELAVD Q+ ++ VI SGDG F Sbjct: 64 FLTWLRRNGFRVITKTLRRYSDGTS----KGDLDMELAVDLLSQAPYIDVAVIVSGDGDF 119 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 T LV QR +V I ST P + L AD ++DL Sbjct: 120 TYLVDRAQRLGLRVEIAST----PRYTATDLMEIADRYIDL 156 >gi|186686260|ref|YP_001869456.1| hypothetical protein Npun_R6229 [Nostoc punctiforme PCC 73102] gi|186468712|gb|ACC84513.1| protein of unknown function DUF88 [Nostoc punctiforme PCC 73102] Length = 231 Score = 91.7 bits (226), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 61/174 (35%), Positives = 95/174 (54%), Gaps = 12/174 (6%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 R ++A+FIDG NL+ ++ LG +IDY KLL + + ++RA++YT V E+Q Sbjct: 57 RGRVAIFIDGLNLFHTALQLGIEIDYVKLLCHLTNGSRLLRAFFYTGVDNSNEKQ----Q 112 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 L W+ NG++VVAK + EN KS+++VE+AVD + + V+ SGDG Sbjct: 113 GFLLWMRRNGYRVVAKDIMQPAENFK----KSNLNVEIAVDMITLAPYYDTAVLVSGDGD 168 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178 V A+ R +V +VS + S+ L AD F+DL +K I +D + Sbjct: 169 LAYAVNAVSRMGVRVEVVSL----QTTTSESLIDVADCFIDLDSIKAHIQKDSN 218 >gi|186680639|ref|YP_001863835.1| hypothetical protein Npun_R0091 [Nostoc punctiforme PCC 73102] gi|186463091|gb|ACC78892.1| protein of unknown function DUF88 [Nostoc punctiforme PCC 73102] Length = 210 Score = 91.7 bits (226), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 58/177 (32%), Positives = 99/177 (55%), Gaps = 12/177 (6%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 + + R ++A+FIDG+NL+ ++ LG +IDY KLL + ++R+++YT V E+Q Sbjct: 17 VLENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTGGSRLLRSFFYTGVDRTNEKQ- 75 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 L W+ NG++V+AK + + G K K+++DVE+AVD + + V+ S Sbjct: 76 ---QGFLLWMRRNGYRVIAKDLVQLPD--GSK--KANLDVEIAVDMMALVDSYDTAVLVS 128 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 GDG V ++ + +V +VS SM SD L +D ++DL +K +I + P Sbjct: 129 GDGDLAYAVNSVSYRGVRVEVVSL----RSMTSDSLINVSDRYIDLEAIKEDIQKTP 181 >gi|284929296|ref|YP_003421818.1| hypothetical protein UCYN_07430 [cyanobacterium UCYN-A] gi|284809740|gb|ADB95437.1| uncharacterized conserved protein [cyanobacterium UCYN-A] Length = 227 Score = 91.7 bits (226), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 58/175 (33%), Positives = 97/175 (55%), Gaps = 12/175 (6%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M + R ++A+FIDG+NL+ ++ LG +IDY +LL + ++RA++YT V E+Q Sbjct: 42 MLENRGRVAIFIDGSNLFYAALQLGIEIDYTRLLYRLTEGSRLLRAFFYTGVDRTNEKQ- 100 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 L W+ NG++V+AK + + G K K+++DVE+AVD + +I S Sbjct: 101 ---QGFLLWMRRNGYRVIAKDLVQLPD--GSK--KANLDVEIAVDLMALVGSYDTAIIVS 153 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 GDG ++ + +V +VS SM SD L AD+++DL +K +I + Sbjct: 154 GDGDLAYAANSVSYRGARVEVVSL----RSMTSDSLINVADHYIDLDQIKEDIQK 204 >gi|218437105|ref|YP_002375434.1| hypothetical protein PCC7424_0096 [Cyanothece sp. PCC 7424] gi|218169833|gb|ACK68566.1| protein of unknown function DUF88 [Cyanothece sp. PCC 7424] Length = 201 Score = 91.3 bits (225), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 60/175 (34%), Positives = 97/175 (55%), Gaps = 12/175 (6%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 + + R ++A+FIDG+NL+ ++ LG +IDY KLL + + ++RA++YT V E+Q Sbjct: 16 ILENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLYRLTNGSKLLRAFFYTGVDRSNEKQ- 74 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 L W+ NG++V+AK + + G K K+++DVE+AVD + VI S Sbjct: 75 ---QGFLLWMRRNGYRVIAKDLVQLPD--GSK--KANLDVEIAVDLMSLVGSYDTAVIVS 127 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 GDG A+ + +V +VS SM SD L AD ++DL +K +I + Sbjct: 128 GDGDLAYAANAVSYQGARVEVVSL----RSMTSDSLINVADRYVDLDQIKEDIQK 178 >gi|307151237|ref|YP_003886621.1| hypothetical protein Cyan7822_1345 [Cyanothece sp. PCC 7822] gi|306981465|gb|ADN13346.1| protein of unknown function DUF88 [Cyanothece sp. PCC 7822] Length = 222 Score = 90.9 bits (224), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 60/175 (34%), Positives = 97/175 (55%), Gaps = 12/175 (6%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 + + R ++A+FIDG+NL+ ++ LG +IDY KLL + + ++RA++YT V E+Q Sbjct: 37 ILENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLFRLTNGSKLLRAFFYTGVDRSNEKQ- 95 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 L W+ NG++V+AK + + G K K+++DVE+AVD + VI S Sbjct: 96 ---QGFLLWMRRNGYRVIAKDLVQLPD--GSK--KANLDVEIAVDLMSLVGSYDTAVIVS 148 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 GDG A+ + +V +VS SM SD L AD ++DL +K +I + Sbjct: 149 GDGDLAYAANAVSYRGARVEVVSL----RSMTSDSLINVADRYVDLDQIKEDIQK 199 >gi|189347490|ref|YP_001944019.1| hypothetical protein Clim_2008 [Chlorobium limicola DSM 245] gi|189341637|gb|ACD91040.1| protein of unknown function DUF88 [Chlorobium limicola DSM 245] Length = 304 Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 55/146 (37%), Positives = 81/146 (55%), Gaps = 16/146 (10%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 +K ALFIDGANL+ + + LG+ ID+ +L+ F +R V+ A YY SP P Sbjct: 31 QKAALFIDGANLFYTQRHLGWQIDFSRLMLYFTNRYTVVSARYYVP---------SPDPP 81 Query: 66 LLDWLHYN------GFQVVAK-VAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVI 118 D + +N GF++++K V K + G +K ++D+ELAVDA E V+ Sbjct: 82 SEDQVAFNRVLITHGFEIISKPVKKIVNRDTGEIIMKGNLDIELAVDAMLTEHQFEVFVL 141 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVST 144 FSGD F L+ A+Q K K V++ ST Sbjct: 142 FSGDSDFLPLIMAMQMKGKTVSVFST 167 >gi|159029235|emb|CAO87595.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 201 Score = 90.5 bits (223), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 60/175 (34%), Positives = 97/175 (55%), Gaps = 12/175 (6%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 + + R ++A+FIDG+NL+ ++ LG +IDY KLL + + ++RA++YT V E+Q Sbjct: 16 VLENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTAGSRLLRAFFYTGVDRTNEKQ- 74 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 L W+ NG++V+AK + + G K K+++DVE+AVD + VI S Sbjct: 75 ---QGFLLWMRRNGYRVIAKDLVQLPD--GSK--KANLDVEIAVDLMALVGSYDTAVIVS 127 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 GDG ++ + +V +VS SM SD L AD ++DL +K EI + Sbjct: 128 GDGDLAYAADSVSYRGARVEVVSL----RSMTSDSLINVADRYVDLDQIKEEIQK 178 >gi|166367025|ref|YP_001659298.1| hypothetical protein MAE_42840 [Microcystis aeruginosa NIES-843] gi|166089398|dbj|BAG04106.1| hypothetical protein MAE_42840 [Microcystis aeruginosa NIES-843] Length = 201 Score = 90.5 bits (223), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 60/175 (34%), Positives = 97/175 (55%), Gaps = 12/175 (6%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 + + R ++A+FIDG+NL+ ++ LG +IDY KLL + + ++RA++YT V E+Q Sbjct: 16 VLENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTAGSRLLRAFFYTGVDRTNEKQ- 74 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 L W+ NG++V+AK + + G K K+++DVE+AVD + VI S Sbjct: 75 ---QGFLLWMRRNGYRVIAKDLVQLPD--GSK--KANLDVEIAVDLMALVGSYDTAVIVS 127 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 GDG ++ + +V +VS SM SD L AD ++DL +K EI + Sbjct: 128 GDGDLAYAADSVSYRGARVEVVSL----RSMTSDSLINVADRYVDLDQIKEEIQK 178 >gi|332707287|ref|ZP_08427340.1| hypothetical protein LYNGBM3L_34690 [Lyngbya majuscula 3L] gi|332354021|gb|EGJ33508.1| hypothetical protein LYNGBM3L_34690 [Lyngbya majuscula 3L] Length = 200 Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 58/180 (32%), Positives = 100/180 (55%), Gaps = 12/180 (6%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 + + R ++A+FIDG+NL+ ++ LG +IDY KLL + + ++R+++YT V E+Q Sbjct: 16 VLENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTAGSRLLRSFFYTGVDRTNEKQ- 74 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 L W+ NG++V+AK + + G K K+++DVE+AVD + V+ S Sbjct: 75 ---QGFLLWMRRNGYRVIAKDLVQLPD--GSK--KANLDVEIAVDMMALVGSYDTAVLVS 127 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG V ++ + +V +VS SM SD L AD ++DL ++ I + P ++ Sbjct: 128 GDGDLAYAVDSVSYRGVRVEVVSL----RSMTSDSLINVADRYIDLDTIQESIQKTPKQN 183 >gi|22298293|ref|NP_681540.1| hypothetical protein tlr0751 [Thermosynechococcus elongatus BP-1] gi|22294472|dbj|BAC08302.1| tlr0751 [Thermosynechococcus elongatus BP-1] Length = 227 Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 59/173 (34%), Positives = 95/173 (54%), Gaps = 12/173 (6%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 R ++A+FIDG+NL+ ++ LG +IDY KLL + + R+++YT V E+Q Sbjct: 19 RGRVAIFIDGSNLFYAALQLGIEIDYSKLLCHLTQGSRLFRSFFYTGVDPTNEKQ----Q 74 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 L W+ NG++VV+K + + G K K+++DVE+AVD + ++ SGDG Sbjct: 75 GFLLWMRRNGYRVVSKELVQLPD--GSK--KANLDVEIAVDMMALVGCYDTAILVSGDGD 130 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 V A+ + +V +VS SM SD L AD ++DL ++ EI + P Sbjct: 131 LAYAVDAVSYRGARVEVVSLR----SMTSDSLINVADRYIDLESIREEIQKAP 179 >gi|37521016|ref|NP_924393.1| hypothetical protein glr1447 [Gloeobacter violaceus PCC 7421] gi|35212012|dbj|BAC89388.1| glr1447 [Gloeobacter violaceus PCC 7421] Length = 190 Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 55/167 (32%), Positives = 92/167 (55%), Gaps = 10/167 (5%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 ++++++FIDG N++ + ++ G+ D RK+L+ F ++ A++YT + DP+ Q Sbjct: 7 QDRVSIFIDGNNMFYAQRSNGWFFDPRKVLEYFNRHEALVNAFWYTGI-RDPQDQ----R 61 Query: 65 PLLDWLHYNGFQVVAKVAKEFTEN-CGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 D L GF V K KE+ + G K+++D+E+ VD F H V+FSGDG Sbjct: 62 GFRDALIAMGFTVREKFLKEYYDRLSGEMTQKANLDIEIVVDMFNTVAQYNHAVLFSGDG 121 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170 F V L+ K ++T+VST M + +LR AD ++DL L+ Sbjct: 122 DFERAVELLRSKDTRITVVST----EGMIARELRNAADRYIDLNDLR 164 >gi|221633438|ref|YP_002522663.1| hypothetical protein trd_1460 [Thermomicrobium roseum DSM 5159] gi|221157206|gb|ACM06333.1| Protein of unknown function superfamily [Thermomicrobium roseum DSM 5159] Length = 198 Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 52/161 (32%), Positives = 90/161 (55%), Gaps = 12/161 (7%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 +++A+F D +NLY ++ LG IDY +LL+ + ++ AY Y T+ G+ S P Sbjct: 8 DRVAVFFDMSNLYFVARDLGVRIDYARLLEFLVAGRRLVCAYAYVTLAGEE----SSAVP 63 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125 L WL NGF+VV + + ++ ++ +D+E+AVD Q+ ++ +V+ +GDG + Sbjct: 64 FLTWLRRNGFRVVTRTLRRGSDGA----LRGDLDLEMAVDVLLQTPHVDVIVLVTGDGEY 119 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 LV +QR ++V I S P + +L ADY++DL Sbjct: 120 CYLVETVQRLGRRVEIASA----PRNTAVELMELADYYVDL 156 >gi|300867847|ref|ZP_07112489.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506] gi|300334178|emb|CBN57665.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506] Length = 201 Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 58/175 (33%), Positives = 98/175 (56%), Gaps = 12/175 (6%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 + + R ++A+FIDG+NL+ ++ LG +IDY KLL + + ++R+++YT V E+Q Sbjct: 16 VLENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTAGSRLLRSFFYTGVDRTNEKQ- 74 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 L W+ NG++V++K + + G K K+++DVE+AVD + V+ S Sbjct: 75 ---QGFLLWMRRNGYRVISKDLVQLPD--GSK--KANLDVEIAVDMMALVGSYDTAVLVS 127 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 GDG V A+ + +V +VS SM SD L AD ++DL +K +I + Sbjct: 128 GDGDLAYAVDAVSYRGVRVEVVSL----RSMTSDSLINVADRYIDLESIKEDIQK 178 >gi|254424426|ref|ZP_05038144.1| conserved hypothetical protein [Synechococcus sp. PCC 7335] gi|196191915|gb|EDX86879.1| conserved hypothetical protein [Synechococcus sp. PCC 7335] Length = 211 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 59/175 (33%), Positives = 96/175 (54%), Gaps = 12/175 (6%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 + + R ++A+FIDG+NL+ ++ LG +IDY KLL S + + R+++YT V E+Q Sbjct: 19 VLENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLSRLTSGSRLFRSFFYTGVDRSNEKQ- 77 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 L W+ NG++V+AK + + G K K+++DVE+AVD + V+ S Sbjct: 78 ---QGFLLWMRRNGYRVIAKDLVQLPD--GSK--KANLDVEIAVDMMALVGCYDTAVLVS 130 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 GDG V A K +V +VS +M SD L +D ++DL +K +I + Sbjct: 131 GDGDLAYAVDAASYKGVRVEVVSL----RAMTSDSLINVSDRYIDLDSIKEDICK 181 >gi|170079300|ref|YP_001735938.1| hypothetical protein SYNPCC7002_A2707 [Synechococcus sp. PCC 7002] gi|169886969|gb|ACB00683.1| conserved hypothetical protein [Synechococcus sp. PCC 7002] Length = 204 Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 58/175 (33%), Positives = 97/175 (55%), Gaps = 12/175 (6%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 + + R ++A+FIDG+NL+ ++ LG +IDY KLL + ++R+++YT V E+Q Sbjct: 16 VLENRGRVAIFIDGSNLFYAALQLGIEIDYSKLLYRLTGGSRLLRSFFYTGVDRANEKQ- 74 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 L W+ NG++V+AK + + G K K+++DVE+AVD + V+ S Sbjct: 75 ---QGFLLWMRRNGYRVIAKDLVQLPD--GSK--KANLDVEIAVDMMALVGSYDTAVLVS 127 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 GDG V A+ + +V +VS SM SD L AD ++DL ++ +I + Sbjct: 128 GDGDLAYAVDAVSYRGARVEVVSL----RSMTSDSLINVADRYIDLEQIQTDIQK 178 >gi|254421306|ref|ZP_05035024.1| conserved hypothetical protein [Synechococcus sp. PCC 7335] gi|196188795|gb|EDX83759.1| conserved hypothetical protein [Synechococcus sp. PCC 7335] Length = 328 Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 63/168 (37%), Positives = 93/168 (55%), Gaps = 12/168 (7%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 I +FIDG+NL+ ++ L ++DYR+LL + ++RAY+YT V E+Q L Sbjct: 173 ITIFIDGSNLFYAASHLNIEVDYRRLLTSLVRGRRLLRAYFYTGVDPQNEKQ----RGFL 228 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTT 127 WL+ +G +V V+KE T N K++M VE+AVD SE ++ + GDG Sbjct: 229 LWLNRHGHRV---VSKELT-NLPDGSRKANMHVEMAVDMMRISEYCSNITLLGGDG---N 281 Query: 128 LVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 L ALQ ++ T + V+S SM SD L AD + DLA L++ I R Sbjct: 282 LAYALQVLSQRGTFIE-VVSLQSMTSDSLIDIADSYTDLADLRDRIKR 328 >gi|158335465|ref|YP_001516637.1| hypothetical protein AM1_2313 [Acaryochloris marina MBIC11017] gi|158305706|gb|ABW27323.1| conserved hypothetical protein [Acaryochloris marina MBIC11017] Length = 210 Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 58/175 (33%), Positives = 96/175 (54%), Gaps = 12/175 (6%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 + + R +IA+FIDG+NL+ ++ LG +IDY KLL + ++R+++YT V E+Q Sbjct: 18 VLENRGRIAIFIDGSNLFYAALQLGIEIDYTKLLCRLTCGSRLLRSFFYTGVDPTNEKQ- 76 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 L W+ NG++V+ K + + G K K+++DVE+AVD + ++ S Sbjct: 77 ---QGFLLWMRRNGYRVITKELVQLPD--GSK--KANLDVEIAVDMMSLVGCYDTAILVS 129 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 GDG V A+ + +V +VS SM SD L AD ++DL +K +I + Sbjct: 130 GDGDLAYAVDAVSYRGIRVEVVSL----RSMTSDSLINVADRYIDLEGIKGDIQK 180 >gi|75908331|ref|YP_322627.1| hypothetical protein Ava_2110 [Anabaena variabilis ATCC 29413] gi|75702056|gb|ABA21732.1| Protein of unknown function DUF88 [Anabaena variabilis ATCC 29413] Length = 173 Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 54/179 (30%), Positives = 99/179 (55%), Gaps = 13/179 (7%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFR---SRAIVIRAYYYTTVVGDPE 57 M P ++++F+DG N++ + + G+ D R++L+ F+ S +I A++YT + DP+ Sbjct: 1 MGSPMNRLSIFVDGNNMFYAQQKNGWFFDPRRVLEYFKNEQSETTLINAFWYTGL-KDPQ 59 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENC-GRKRVKSSMDVELAVDAFEQSEGLEHL 116 Q D L G+ V K+ KE+ ++ GR K+++D+E+ VD F + + + Sbjct: 60 DQ----RGFRDALISLGYTVRTKILKEYYDDSSGRYSQKANLDIEIVVDMFNTVDQYDRV 115 Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 V+FSGDG F + L+ K +T+VST M + +LR D ++DL +++ I + Sbjct: 116 VLFSGDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIRDRIEK 170 >gi|282896757|ref|ZP_06304763.1| Protein of unknown function DUF88 [Raphidiopsis brookii D9] gi|281198166|gb|EFA73056.1| Protein of unknown function DUF88 [Raphidiopsis brookii D9] Length = 173 Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 54/179 (30%), Positives = 100/179 (55%), Gaps = 13/179 (7%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSR---AIVIRAYYYTTVVGDPE 57 M P ++++F+DG N++ + + G+ D R++L+ F++ +I A++YT + DP+ Sbjct: 1 MVLPMSRLSIFVDGNNMFYAQQKNGWFFDPRRVLEYFKNEQPETTLINAFWYTGL-KDPQ 59 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENC-GRKRVKSSMDVELAVDAFEQSEGLEHL 116 Q D L G+ V K+ KE+ ++ GR K+++D+E+ VD F + + + Sbjct: 60 DQ----RGFRDALISLGYTVRTKILKEYYDDVSGRYSQKANLDIEIVVDMFNTVDQYDRV 115 Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 V+FSGDG F + L+ K +T+VST M + +LR D ++DL +K++I + Sbjct: 116 VLFSGDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIKDQIEK 170 >gi|172036862|ref|YP_001803363.1| hypothetical protein cce_1947 [Cyanothece sp. ATCC 51142] gi|171698316|gb|ACB51297.1| unknown [Cyanothece sp. ATCC 51142] Length = 225 Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 57/175 (32%), Positives = 96/175 (54%), Gaps = 12/175 (6%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 + + R ++A+FIDG+NL+ ++ LG +IDY KLL + ++RA++YT V E+Q Sbjct: 41 VLENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLYRLTEGSRLLRAFFYTGVDRTNEKQ- 99 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 L W+ NG++V+AK + + G K K+++DVE+AVD + +I S Sbjct: 100 ---QGFLLWMRRNGYRVIAKDLVQLPD--GSK--KANLDVEIAVDLMALVGSYDTAIIVS 152 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 GDG ++ + ++ +VS SM SD L AD ++DL +K +I + Sbjct: 153 GDGDLAYAADSVSYRGARIEVVSL----RSMTSDSLINVADRYIDLDQIKEDIQK 203 >gi|126656216|ref|ZP_01727600.1| hypothetical protein CY0110_03999 [Cyanothece sp. CCY0110] gi|126622496|gb|EAZ93202.1| hypothetical protein CY0110_03999 [Cyanothece sp. CCY0110] Length = 225 Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 57/175 (32%), Positives = 96/175 (54%), Gaps = 12/175 (6%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 + + R ++A+FIDG+NL+ ++ LG +IDY KLL + ++RA++YT V E+Q Sbjct: 41 VLENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLYRLTEGSRLLRAFFYTGVDRTNEKQ- 99 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 L W+ NG++V+AK + + G K K+++DVE+AVD + +I S Sbjct: 100 ---QGFLLWMRRNGYRVIAKDLVQLPD--GSK--KANLDVEIAVDLMALVGSYDTAIIVS 152 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 GDG ++ + ++ +VS SM SD L AD ++DL +K +I + Sbjct: 153 GDGDLAYAADSVSYRGARIEVVSL----RSMTSDSLINVADRYIDLDQIKEDIQK 203 >gi|282901769|ref|ZP_06309684.1| protein of unknown function DUF88 [Cylindrospermopsis raciborskii CS-505] gi|281193386|gb|EFA68368.1| protein of unknown function DUF88 [Cylindrospermopsis raciborskii CS-505] Length = 173 Score = 87.4 bits (215), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 53/179 (29%), Positives = 100/179 (55%), Gaps = 13/179 (7%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSR---AIVIRAYYYTTVVGDPE 57 M P ++++F+DG N++ + + G+ D R++L+ F++ +I A++YT + DP+ Sbjct: 1 MVLPMSRLSIFVDGNNMFYAQQKNGWFFDPRRVLEYFKNEQPETTLINAFWYTGL-KDPQ 59 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENC-GRKRVKSSMDVELAVDAFEQSEGLEHL 116 Q D L G+ V K+ KE+ ++ GR K+++D+E+ VD F + + + Sbjct: 60 DQ----RGFRDALISLGYTVRTKILKEYYDDVSGRYSQKANLDIEIVVDMFNTVDQYDRV 115 Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 V+FSGDG F + L+ K +T+VST M + +LR D ++DL ++++I + Sbjct: 116 VLFSGDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIRDQIEK 170 >gi|119511234|ref|ZP_01630350.1| hypothetical protein N9414_18593 [Nodularia spumigena CCY9414] gi|119464112|gb|EAW45033.1| hypothetical protein N9414_18593 [Nodularia spumigena CCY9414] Length = 173 Score = 87.4 bits (215), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 54/179 (30%), Positives = 98/179 (54%), Gaps = 13/179 (7%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFR---SRAIVIRAYYYTTVVGDPE 57 M P ++++F+DG N++ + + G+ D R++L F+ S +I A++YT + DP+ Sbjct: 1 MGSPMNRLSIFVDGNNMFYAQQKNGWFFDPRRVLDYFKHEQSDTTLINAFWYTGL-KDPQ 59 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENC-GRKRVKSSMDVELAVDAFEQSEGLEHL 116 Q D L G+ V K+ KE+ ++ GR K+++D+E+ VD F + + + Sbjct: 60 DQ----RGFRDALISLGYTVRTKILKEYYDDSSGRYSQKANLDIEIVVDMFNTVDQYDRV 115 Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 V+FSGDG F + L+ K +T+VST M + +LR D ++DL +++ I + Sbjct: 116 VLFSGDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIRDSIEK 170 >gi|282899662|ref|ZP_06307626.1| protein of unknown function DUF88 [Cylindrospermopsis raciborskii CS-505] gi|281195541|gb|EFA70474.1| protein of unknown function DUF88 [Cylindrospermopsis raciborskii CS-505] Length = 230 Score = 87.0 bits (214), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 58/172 (33%), Positives = 92/172 (53%), Gaps = 12/172 (6%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 R ++A+FIDG NL+ ++ +G +IDY KLL + ++RA++YT V E+Q Sbjct: 56 RGRVAIFIDGLNLFHAALQIGIEIDYVKLLCRLTQTSRLLRAFFYTGVDTSKEKQ----Q 111 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 L W+ NG++VV K TE+ G+ K +++VE+AVD + + V+ SGDG Sbjct: 112 GFLLWMRRNGYRVVTKDIIALTES-GK---KPNLNVEIAVDMITLAPYYDTAVLVSGDGD 167 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 V A+ +V ++ +M SD L ADYF+D +K I +D Sbjct: 168 LAYAVNAVTSLGSRVEVIGL----QTMTSDSLIDVADYFIDFDSIKQYIQKD 215 >gi|298491324|ref|YP_003721501.1| hypothetical protein Aazo_2466 ['Nostoc azollae' 0708] gi|298233242|gb|ADI64378.1| protein of unknown function DUF88 ['Nostoc azollae' 0708] Length = 228 Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 57/172 (33%), Positives = 90/172 (52%), Gaps = 12/172 (6%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 R ++A+FIDG NL+ ++ LG +IDY KLL + ++RA++YT V E+Q Sbjct: 54 RGRVAIFIDGLNLFHAALQLGIEIDYVKLLCRLTQSSRLLRAFFYTGVDASKEKQ----Q 109 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 L W+ NG++VV K EN G+ K +++VE+A+D + + V+ SGDG Sbjct: 110 GFLLWMRRNGYRVVTKDILAVAEN-GK---KPNLNVEIAIDMITLAPYYDTAVLVSGDGD 165 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 V A+ +V ++ + SD L ADYF+D +K I +D Sbjct: 166 LAYAVNAVSSLGSRVEVIGL----QTTTSDTLINVADYFIDFDSVKQHIQKD 213 >gi|209528287|ref|ZP_03276748.1| protein of unknown function DUF88 [Arthrospira maxima CS-328] gi|284053607|ref|ZP_06383817.1| hypothetical protein AplaP_19301 [Arthrospira platensis str. Paraca] gi|209491273|gb|EDZ91667.1| protein of unknown function DUF88 [Arthrospira maxima CS-328] gi|291565674|dbj|BAI87946.1| hypothetical protein [Arthrospira platensis NIES-39] Length = 173 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 54/179 (30%), Positives = 99/179 (55%), Gaps = 13/179 (7%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRA---IVIRAYYYTTVVGDPE 57 M + R ++++F+DG N++ + + G+ D R++L F+ I I A++YT + DP+ Sbjct: 1 MPNLRNRLSIFVDGNNMFYAQQKNGWFFDPRRVLDYFKHEQADLIFINAFWYTGL-KDPQ 59 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENC-GRKRVKSSMDVELAVDAFEQSEGLEHL 116 Q D L G+ V K+ KE+ ++ GR K+++D+E+ VD F + + + Sbjct: 60 DQ----RGFRDALISLGYTVRTKILKEYYDDSSGRYSQKANLDIEIVVDMFNTVDQYDRV 115 Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 V+FSGDG F + L+ K +T+VST M + +LR D ++DL ++++I + Sbjct: 116 VLFSGDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIRDQIEK 170 >gi|17232221|ref|NP_488769.1| hypothetical protein all4729 [Nostoc sp. PCC 7120] gi|75908164|ref|YP_322460.1| hypothetical protein Ava_1943 [Anabaena variabilis ATCC 29413] gi|17133866|dbj|BAB76428.1| all4729 [Nostoc sp. PCC 7120] gi|75701889|gb|ABA21565.1| Protein of unknown function DUF88 [Anabaena variabilis ATCC 29413] Length = 236 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 62/183 (33%), Positives = 96/183 (52%), Gaps = 26/183 (14%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTV-----------V 53 R ++A+FIDGANL+ ++ LG +IDY KLL + + ++RA++YT V Sbjct: 54 RGRVAIFIDGANLFQAALQLGIEIDYLKLLCRLTAGSRLLRAFFYTGVDMSRPTPTRQRT 113 Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGL 113 D +Q F L W+ NG++VV K + T+N K +++VE+AVD + Sbjct: 114 NDKQQGF------LFWMRRNGYRVVTK-ELQVTDN----NKKPNLNVEIAVDMITLAPHY 162 Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 + V+ SGDG V A+ +V +VS +M +D L ADYF+DL +K I Sbjct: 163 DTAVLVSGDGDLAYAVNAVSSTGVRVEVVSL----RTMTNDCLIDVADYFIDLDSIKQYI 218 Query: 174 ARD 176 +D Sbjct: 219 QKD 221 >gi|113475474|ref|YP_721535.1| hypothetical protein Tery_1805 [Trichodesmium erythraeum IMS101] gi|110166522|gb|ABG51062.1| protein of unknown function DUF88 [Trichodesmium erythraeum IMS101] Length = 204 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 55/175 (31%), Positives = 97/175 (55%), Gaps = 12/175 (6%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 + + R ++A+FIDG+NL+ ++ LG +IDY KLL + ++R+++YT V E+Q Sbjct: 20 ILENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTGGSRLLRSFFYTGVDRTNEKQ- 78 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 L W+ NG++V++K + + G K K+++DVE+AVD + ++ S Sbjct: 79 ---QGFLLWMRRNGYRVISKDLVQLPD--GSK--KANLDVEIAVDMMALVGSYDTAILVS 131 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 GDG V A+ + +V +VS +M SD L +D ++DL +K +I + Sbjct: 132 GDGDLAYAVDAVSYRGVRVEVVSL----RAMTSDSLINVSDRYIDLEQIKEDIQK 182 >gi|186681406|ref|YP_001864602.1| hypothetical protein Npun_F0925 [Nostoc punctiforme PCC 73102] gi|186463858|gb|ACC79659.1| protein of unknown function DUF88 [Nostoc punctiforme PCC 73102] Length = 169 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 52/173 (30%), Positives = 98/173 (56%), Gaps = 13/173 (7%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFR---SRAIVIRAYYYTTVVGDPEQQFSPL 63 ++++F+DG N++ + + G+ D R++L+ F+ S +I A++YT + DP+ Q Sbjct: 3 RLSIFVDGNNMFYAQQKNGWFFDPRRVLEYFKHEQSETTLINAFWYTGL-KDPQDQ---- 57 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENC-GRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122 D L G+ V K+ KE+ ++ GR K+++D+E+ VD F + + +V+FSGD Sbjct: 58 RGFRDALISLGYTVRTKILKEYYDDTSGRYSQKANLDIEIVVDMFNTVDQYDRVVLFSGD 117 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 G F + L+ K +T+VST M + +LR D ++DL ++++I + Sbjct: 118 GDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIRDQIEK 166 >gi|220910043|ref|YP_002485354.1| hypothetical protein Cyan7425_4688 [Cyanothece sp. PCC 7425] gi|219866654|gb|ACL46993.1| protein of unknown function DUF88 [Cyanothece sp. PCC 7425] Length = 172 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 53/172 (30%), Positives = 95/172 (55%), Gaps = 12/172 (6%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIV--IRAYYYTTVVGDPEQQFSPLH 64 ++++F+DG N++ + + G+ D R++L F S V + A++YT + DP+ Q Sbjct: 7 RVSIFVDGNNMFYAQQKNGWFFDPRRVLDYFTSEPSVTLVNAFWYTGL-KDPQDQ----R 61 Query: 65 PLLDWLHYNGFQVVAKVAKEF-TENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 D L G+ V K+ KE+ +N GR K+++D+E+ VD F E + +++FSGDG Sbjct: 62 GFRDALISLGYTVRTKILKEYYDDNSGRYSQKANLDIEIVVDMFNTVEQYDRVILFSGDG 121 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 F + L+ K +T+VST M + +LR D ++DL ++ +I + Sbjct: 122 DFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIRPKIEK 169 >gi|218440568|ref|YP_002378897.1| hypothetical protein PCC7424_3645 [Cyanothece sp. PCC 7424] gi|218173296|gb|ACK72029.1| protein of unknown function DUF88 [Cyanothece sp. PCC 7424] Length = 180 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 51/175 (29%), Positives = 98/175 (56%), Gaps = 12/175 (6%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIV--IRAYYYTTVVGDPEQQFS 61 P++++++F+DG N++ + + G+ D R++L+ F + V I A++YT + +Q+ Sbjct: 12 PKDRLSIFVDGNNMFYAQQKNGWFFDPRRVLEYFTNDPTVNLINAFWYTGLKDSQDQR-- 69 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENC-GRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 D L G+ V K+ KE+ ++ GR K+++D+E+ VD F + + +++FS Sbjct: 70 ---GFRDALISLGYTVRTKILKEYYDDSSGRYSQKANLDIEIVVDMFNTVDQYDRVILFS 126 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 GDG F + L+ K +T+VST M + +LR D ++DL ++N I + Sbjct: 127 GDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIRNFIEK 177 >gi|166368642|ref|YP_001660915.1| hypothetical protein MAE_59010 [Microcystis aeruginosa NIES-843] gi|159030407|emb|CAO91305.1| unnamed protein product [Microcystis aeruginosa PCC 7806] gi|166091015|dbj|BAG05723.1| hypothetical protein MAE_59010 [Microcystis aeruginosa NIES-843] Length = 183 Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 50/175 (28%), Positives = 98/175 (56%), Gaps = 12/175 (6%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRS--RAIVIRAYYYTTVVGDPEQQFS 61 P++++++F+DG N++ + + G+ D RK+L F + ++I A++YT + +Q+ Sbjct: 15 PKDRLSIFVDGNNMFYAQQKNGWFFDPRKVLNYFTNDPNIMLINAFWYTGLKDSQDQR-- 72 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENC-GRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 D L G+ V K+ KE+ ++ GR K+++D+E+ VD F + + +++FS Sbjct: 73 ---GFRDALISLGYTVRTKILKEYYDDSSGRFSQKANLDIEIVVDMFNTVDQYDRVILFS 129 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 GDG F + L+ K +T+VST M + +LR D ++DL ++ +I + Sbjct: 130 GDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIRKDIEK 180 >gi|332711770|ref|ZP_08431701.1| hypothetical protein LYNGBM3L_65720 [Lyngbya majuscula 3L] gi|332349748|gb|EGJ29357.1| hypothetical protein LYNGBM3L_65720 [Lyngbya majuscula 3L] Length = 165 Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 51/171 (29%), Positives = 96/171 (56%), Gaps = 12/171 (7%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRA--IVIRAYYYTTVVGDPEQQFSPLHP 65 +++F+DG N++ + + G+ D R++L F++ ++ A++YT + DP+ Q Sbjct: 1 MSIFVDGNNMFYAQQKNGWFFDPRRVLDYFKNEPGITLVNAFWYTGL-KDPQDQ----RG 55 Query: 66 LLDWLHYNGFQVVAKVAKEF-TENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 D L G+ V K+ KE+ +N GR K+++D+E+ VD F E + +++FSGDG Sbjct: 56 FRDALISLGYTVRTKILKEYYDDNSGRYSQKANLDIEIVVDMFNTVEQYDKVILFSGDGD 115 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 F + L+ K +T+VST M + +LR D ++DL ++++I + Sbjct: 116 FERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDVRDQIEK 162 >gi|254413060|ref|ZP_05026832.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC 7420] gi|196180224|gb|EDX75216.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC 7420] Length = 172 Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 51/173 (29%), Positives = 97/173 (56%), Gaps = 12/173 (6%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRA--IVIRAYYYTTVVGDPEQQFSPL 63 +I++F+DG N++ + + G+ D +++L+ FR +++ A++YT + DP+ Q Sbjct: 6 NRISIFVDGNNMFYAQQKNGWFFDPKRVLEYFRKEPHIVLVNAFWYTGL-KDPQDQ---- 60 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENC-GRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122 D L G+ V K+ KE+ ++ GR K+++D+E+ VD F E + +++FSGD Sbjct: 61 RGFRDALISLGYTVRTKILKEYYDDSSGRYSQKANLDIEIVVDMFNTVEQYDRVILFSGD 120 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 G F + L+ K +T+VST M + +LR D ++DL +++ I + Sbjct: 121 GDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIRDYIEK 169 >gi|298492621|ref|YP_003722798.1| hypothetical protein Aazo_4322 ['Nostoc azollae' 0708] gi|298234539|gb|ADI65675.1| protein of unknown function DUF88 ['Nostoc azollae' 0708] Length = 173 Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 51/173 (29%), Positives = 98/173 (56%), Gaps = 13/173 (7%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSR---AIVIRAYYYTTVVGDPEQQFSPL 63 ++++F+DG N++ + + G+ D R++L+ F++ +I A++YT + DP+ Q Sbjct: 7 RLSIFVDGNNMFYAQQKNGWFFDPRRVLEYFKNEQPETTLINAFWYTGL-KDPQDQ---- 61 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENC-GRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122 D L G+ V K+ KE+ ++ GR K+++D+E+ VD F + + +V+FSGD Sbjct: 62 RGFRDALISLGYTVRTKILKEYYDDVSGRYSQKANLDIEIVVDMFNTVDQYDRVVLFSGD 121 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 G F + L+ K +T+VST M + +LR D ++DL ++++I + Sbjct: 122 GDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIRDQIEK 170 >gi|56752213|ref|YP_172914.1| hypothetical protein syc2204_c [Synechococcus elongatus PCC 6301] gi|81300700|ref|YP_400908.1| hypothetical protein Synpcc7942_1891 [Synechococcus elongatus PCC 7942] gi|56687172|dbj|BAD80394.1| hypothetical protein [Synechococcus elongatus PCC 6301] gi|81169581|gb|ABB57921.1| conserved hypothetical protein [Synechococcus elongatus PCC 7942] gi|121309776|dbj|BAF44194.1| LabA [Synechococcus elongatus PCC 7942] Length = 186 Score = 84.3 bits (207), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 54/173 (31%), Positives = 95/173 (54%), Gaps = 13/173 (7%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIV--IRAYYYTTVVGDPEQQFSPLH 64 ++A+FIDG N++ + + G+ D R++L F +R + + AY+YT + DP+ Q Sbjct: 7 RLAIFIDGNNMFYAQQKNGWFFDPRRVLNYFANRPEIELVNAYWYTGL-KDPQDQ----R 61 Query: 65 PLLDWLHYNGFQVVAKVAKEFTE--NCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122 D L G+ V K+ KEF + N R ++++D+E+ +D F E + +V+FSGD Sbjct: 62 GFRDALVSLGYTVRTKMLKEFHDESNGNRYFQRANLDIEIVIDMFNTVEQYDEIVLFSGD 121 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 G F + L+ K +T+VST M + +LR D ++DL +++ I + Sbjct: 122 GDFERAIELLRAKQTHITVVST----DGMIARELRNATDRYIDLNDIRSFIEK 170 >gi|157273336|gb|ABV27235.1| RtsE [Candidatus Chloracidobacterium thermophilum] Length = 332 Score = 84.0 bits (206), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 57/173 (32%), Positives = 94/173 (54%), Gaps = 12/173 (6%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 R ++A+FIDG NL+ ++++ G +IDY KLL R ++RA++YT V +QQ Sbjct: 22 RGRVAIFIDGNNLFHAARSAGVEIDYAKLLAYLRGDDPLLRAFFYTGV----DQQAERQQ 77 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 L W+ NG++VV K K F + G K K+++DVE+AVD ++ + ++ SGD Sbjct: 78 GFLLWMRRNGYRVVQKELKTFPD--GTK--KANLDVEIAVDMLSLADKYDTAILVSGDED 133 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 FT + + K +V + + S +L AD F +L + EI++ P Sbjct: 134 FTYALNVIAYKGVRVEVAGFRAN----TSPRLIDVADRFHELDSVLAEISKSP 182 >gi|86607567|ref|YP_476329.1| hypothetical protein CYB_0065 [Synechococcus sp. JA-2-3B'a(2-13)] gi|86556109|gb|ABD01066.1| conserved hypothetical protein [Synechococcus sp. JA-2-3B'a(2-13)] Length = 175 Score = 84.0 bits (206), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 55/167 (32%), Positives = 91/167 (54%), Gaps = 13/167 (7%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAF-RSRAIV--IRAYYYTTVVGDPEQQF 60 P ++++FIDG N++ + + G+ D R++L F RS+ V + A++YT + DP Q Sbjct: 6 PVTRVSIFIDGNNMFYAQQKNGWFFDPRRVLDYFVRSQPNVELVNAFWYTGI-KDPHDQ- 63 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFT-ENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIF 119 D L GF V K+ KE+ E+ GR K+++D+E+ +D F + +++F Sbjct: 64 ---RAFRDALISMGFTVRTKILKEYRDEDSGRYSQKANLDIEIVIDMFNTVGQYDRIILF 120 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 SGDG F V L+ K +T+VST M + +LR D ++DL Sbjct: 121 SGDGDFERAVELLRSKNTLITVVST----EGMIARELRNATDRYIDL 163 >gi|86605299|ref|YP_474062.1| hypothetical protein CYA_0583 [Synechococcus sp. JA-3-3Ab] gi|86553841|gb|ABC98799.1| conserved hypothetical protein [Synechococcus sp. JA-3-3Ab] Length = 174 Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 55/167 (32%), Positives = 91/167 (54%), Gaps = 13/167 (7%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAF-RSRAIV--IRAYYYTTVVGDPEQQF 60 P ++++FIDG N++ + + G+ D R++L F RS+ V + A++YT + DP Q Sbjct: 5 PVTRVSIFIDGNNMFYAQQKNGWFFDPRRVLDYFVRSQPNVELVNAFWYTGI-KDPNDQ- 62 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFT-ENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIF 119 D L GF V K+ KE+ E+ GR K+++D+E+ +D F + +++F Sbjct: 63 ---RAFRDALISLGFTVRTKILKEYRDEDSGRYSQKANLDIEIVIDMFNTVGQYDRIILF 119 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 SGDG F V L+ K +T+VST M + +LR D ++DL Sbjct: 120 SGDGDFERAVELLRSKNTLITVVST----EGMIARELRNATDRYIDL 162 >gi|113477728|ref|YP_723789.1| hypothetical protein Tery_4322 [Trichodesmium erythraeum IMS101] gi|110168776|gb|ABG53316.1| protein of unknown function DUF88 [Trichodesmium erythraeum IMS101] Length = 171 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 51/171 (29%), Positives = 96/171 (56%), Gaps = 11/171 (6%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAI-VIRAYYYTTVVGDPEQQFSPLHP 65 ++++F+DG N++ + + G+ D R++L+ F + +I A++YT + DP+ Q Sbjct: 7 RLSIFVDGNNMFYAQQKNGWFFDPRRVLEYFNKPEVKLINAFWYTGL-KDPQDQ----RG 61 Query: 66 LLDWLHYNGFQVVAKVAKEFTENC-GRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 D L G+ V K+ KE+ ++ GR K+++D+E+ VD F + + +V+FSGDG Sbjct: 62 FRDALISLGYTVRTKILKEYYDDVSGRYSQKANLDIEIVVDMFNTVDQYDEVVLFSGDGD 121 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 F + L+ K +T+VST M + +LR D ++DL ++ +I + Sbjct: 122 FERAIELLRSKNTHITVVST----EGMIARELRNATDQYVDLNDIRYQIEK 168 >gi|307153372|ref|YP_003888756.1| hypothetical protein Cyan7822_3539 [Cyanothece sp. PCC 7822] gi|306983600|gb|ADN15481.1| protein of unknown function DUF88 [Cyanothece sp. PCC 7822] Length = 180 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 50/175 (28%), Positives = 96/175 (54%), Gaps = 12/175 (6%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIV--IRAYYYTTVVGDPEQQFS 61 P++++++F+DG N++ + + G+ D R++L F + V I A++YT + +Q+ Sbjct: 12 PKDRLSIFVDGNNMFYAQQKNGWFFDPRRVLDHFTNDPTVTLINAFWYTGLKDSQDQR-- 69 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENC-GRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 D L G+ V K+ KE+ ++ GR K+++D+E+ VD F + + +++FS Sbjct: 70 ---GFRDALISLGYTVRTKILKEYYDDSSGRYSQKANLDIEIVVDMFNTVDQYDRVILFS 126 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 GDG F + L+ K +T+VST M + +LR D ++DL ++ I + Sbjct: 127 GDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIRTFIEK 177 >gi|67925984|ref|ZP_00519254.1| Protein of unknown function DUF88 [Crocosphaera watsonii WH 8501] gi|67852173|gb|EAM47662.1| Protein of unknown function DUF88 [Crocosphaera watsonii WH 8501] Length = 178 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 50/174 (28%), Positives = 96/174 (55%), Gaps = 12/174 (6%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRS--RAIVIRAYYYTTVVGDPEQQFSP 62 +E++++F+DG N++ + + G+ D R++L F + +I A++YT + +Q+ Sbjct: 11 KERLSIFVDGNNMFYAQQKNGWFFDPRRVLDYFTNDPHVSLINAFWYTGLKDSQDQR--- 67 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENC-GRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 D L G+ V K+ KE+ ++ GR K+++D+E+ VD F + + +++FSG Sbjct: 68 --GFRDALISLGYTVRTKILKEYYDDTSGRYSQKANLDIEIVVDMFNTVDQYDRVILFSG 125 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 DG F + L+ K +T+VST M + +LR D ++DL +K+ I + Sbjct: 126 DGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIKDSIEK 175 >gi|172038230|ref|YP_001804731.1| hypothetical protein cce_3317 [Cyanothece sp. ATCC 51142] gi|171699684|gb|ACB52665.1| unknown [Cyanothece sp. ATCC 51142] Length = 178 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 50/174 (28%), Positives = 96/174 (55%), Gaps = 12/174 (6%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRS--RAIVIRAYYYTTVVGDPEQQFSP 62 +E++++F+DG N++ + + G+ D R++L F + +I A++YT + +Q+ Sbjct: 11 KERLSIFVDGNNMFYAQQKNGWFFDPRRVLDYFTNDPHVSLINAFWYTGLKDSQDQR--- 67 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENC-GRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 D L G+ V K+ KE+ ++ GR K+++D+E+ VD F + + +++FSG Sbjct: 68 --GFRDALISLGYTVRTKILKEYYDDTSGRYSQKANLDIEIVVDMFNTVDQYDRVILFSG 125 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 DG F + L+ K +T+VST M + +LR D ++DL +K+ I + Sbjct: 126 DGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIKDSIEK 175 >gi|218246675|ref|YP_002372046.1| hypothetical protein PCC8801_1847 [Cyanothece sp. PCC 8801] gi|257059717|ref|YP_003137605.1| hypothetical protein Cyan8802_1873 [Cyanothece sp. PCC 8802] gi|218167153|gb|ACK65890.1| protein of unknown function DUF88 [Cyanothece sp. PCC 8801] gi|256589883|gb|ACV00770.1| protein of unknown function DUF88 [Cyanothece sp. PCC 8802] Length = 178 Score = 81.6 bits (200), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 48/175 (27%), Positives = 96/175 (54%), Gaps = 12/175 (6%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIV--IRAYYYTTVVGDPEQQFS 61 P+E++++F+DG N++ + + + D R++L+ F + + + A++YT + +Q+ Sbjct: 10 PKERLSIFVDGNNMFYAQQKNSWFFDPRRVLEYFTNDPTITLVNAFWYTGLKDSQDQR-- 67 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENC-GRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 D L G+ V K+ KE+ ++ GR K+++D+E+ VD F + + +++FS Sbjct: 68 ---GFRDALISLGYTVRTKILKEYYDDTSGRYSQKANLDIEIVVDMFNTVDQYDRVILFS 124 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 GDG F + L+ K +T+VST M + +LR D ++DL ++ I + Sbjct: 125 GDGDFERAIELLRSKSTHITVVST----EGMIARELRNATDRYIDLNDIRPHIEK 175 >gi|22298340|ref|NP_681587.1| hypothetical protein tll0798 [Thermosynechococcus elongatus BP-1] gi|22294519|dbj|BAC08349.1| tll0798 [Thermosynechococcus elongatus BP-1] Length = 176 Score = 80.5 bits (197), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 53/176 (30%), Positives = 98/176 (55%), Gaps = 16/176 (9%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRS--RAIVIRAYYYTTVVGDPEQ 58 M +E++++FIDG N++ + + G+ D R++L+ F + +++ A++YT + D + Sbjct: 1 MLPAQERLSIFIDGNNMFYAQQKNGWFFDPRRVLEFFTRDPKIVLVNAFWYTGL-KDMQD 59 Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEF-TENCGRKRVKSSMDVELAVDAFEQSEGLEHLV 117 Q S L++ G+ V K+ KE+ E+ G+ K+++D+E+ +D F + +V Sbjct: 60 QRSFRDALINL----GYTVRTKLLKEYYDESLGKYYQKANLDIEIVIDMFNTVGQYDRVV 115 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 +FSGDG F + L+ K +T+VST M + +LR D ++DL NEI Sbjct: 116 LFSGDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDL----NEI 163 >gi|170077971|ref|YP_001734609.1| hypothetical protein SYNPCC7002_A1357 [Synechococcus sp. PCC 7002] gi|169885640|gb|ACA99353.1| Protein of unknown function (PF01936) [Synechococcus sp. PCC 7002] Length = 172 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 50/174 (28%), Positives = 93/174 (53%), Gaps = 12/174 (6%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIV--IRAYYYTTVVGDPEQQFSP 62 + ++++F+DG N++ + + + D R++L F V I A++YT + +Q+ Sbjct: 5 QRRLSIFVDGNNMFYAQQKNNWFFDPRRVLDYFTCDPTVRLINAFWYTGLKDSQDQR--- 61 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENC-GRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 D L G+ V K+ KE+ ++ GR K+++D+E+ VD F + + +++FSG Sbjct: 62 --GFRDALISLGYTVRTKILKEYYDDVSGRYSQKANLDIEIVVDMFNTVDQYDQVILFSG 119 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 DG F + L+ K +T+VST M + +LR D ++DL L+ EI + Sbjct: 120 DGDFERAIELLRSKNTHITVVST----EGMIARELRNATDCYIDLNNLRAEIEK 169 >gi|218290176|ref|ZP_03494335.1| protein of unknown function DUF88 [Alicyclobacillus acidocaldarius LAA1] gi|258512267|ref|YP_003185701.1| hypothetical protein Aaci_2303 [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|218239771|gb|EED06961.1| protein of unknown function DUF88 [Alicyclobacillus acidocaldarius LAA1] gi|257478993|gb|ACV59312.1| protein of unknown function DUF88 [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 168 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 51/171 (29%), Positives = 92/171 (53%), Gaps = 9/171 (5%) Query: 7 KIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 +++LF+DGAN Y + L + ID +KLL+ +S+ ++ A+YY +G Sbjct: 2 RVSLFVDGANYYYMQRDKLKWTIDAQKLLEWAKSKGELVDAFYY---IGRSSPSDVREQK 58 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125 LD L Y+G+ +V K KE + G K+++D+E+ +D F E + ++ SGDG F Sbjct: 59 YLDMLAYSGYSIVTKDIKEIVQEDGSITRKANLDIEIVLDMFNTIENYDMAILVSGDGDF 118 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD-YFMDLAYLKNEIAR 175 + L+ + KK ++ST + +LR A +F+D+ L++++ R Sbjct: 119 ERALQLLRARGKKFIVLST----AGFIASELRMVAGMHFIDVNTLRDQLER 165 >gi|158333892|ref|YP_001515064.1| hypothetical protein AM1_0704 [Acaryochloris marina MBIC11017] gi|158304133|gb|ABW25750.1| conserved hypothetical protein [Acaryochloris marina MBIC11017] Length = 172 Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 49/173 (28%), Positives = 92/173 (53%), Gaps = 12/173 (6%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIV--IRAYYYTTVVGDPEQQFSPL 63 + ++F+DG N++ + + G+ D R++L F V I A++YT + DP+ Q Sbjct: 6 NRTSIFVDGNNMFYAQQKNGWFFDPRRILNYFTEPTDVRLINAFWYTGL-KDPQDQ---- 60 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENC-GRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122 D L G+ V K+ KE+ ++ GR K+++D+E+ +D F + + +++ SGD Sbjct: 61 RGFRDALISLGYTVRTKILKEYYDDSSGRYSQKANLDIEIVIDMFNTVDQYDQVILLSGD 120 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 G F + L+ K +T+VST M + +LR D ++DL +++ I + Sbjct: 121 GDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNKIRDRIEK 169 >gi|194335638|ref|YP_002017432.1| protein of unknown function DUF88 [Pelodictyon phaeoclathratiforme BU-1] gi|194308115|gb|ACF42815.1| protein of unknown function DUF88 [Pelodictyon phaeoclathratiforme BU-1] Length = 287 Score = 78.2 bits (191), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 56/178 (31%), Positives = 92/178 (51%), Gaps = 27/178 (15%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTV---VGDPEQQFSPL 63 + A+FIDGANL+ + + LG+ ID+ +L+ F S + A YY V + F+ + Sbjct: 10 RAAVFIDGANLFYTQRHLGWQIDFSRLMAFFISGYATVEANYYVPASEPVSEENAAFTRV 69 Query: 64 HPLLDWLHYNGFQVVAK-VAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122 L +G+ + +K V K + G +K ++DVEL VDA +++ + ++FSGD Sbjct: 70 ------LMAHGYHITSKPVKKIVNKETGVIVMKGNLDVELVVDALSRADQYDTFILFSGD 123 Query: 123 GCFTTLVAALQRKVKKVTIVST-------VLSDPSMASDQLRRQADYFMDLAYLKNEI 173 F L+ AL+ K K+V + ST +L++P +A + DLA LK I Sbjct: 124 SDFIPLLRALKEKGKEVLVYSTQGLSARELLAEPGIA----------YHDLALLKERI 171 >gi|16332216|ref|NP_442944.1| hypothetical protein slr0755 [Synechocystis sp. PCC 6803] gi|1653846|dbj|BAA18756.1| slr0755 [Synechocystis sp. PCC 6803] Length = 185 Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 49/174 (28%), Positives = 94/174 (54%), Gaps = 12/174 (6%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIV--IRAYYYTTVVGDPEQQFSP 62 R+++++F+DG N++ + + G+ D R++L F V + A++YT + +Q+ Sbjct: 11 RDRLSIFVDGNNMFYAQQKNGWFFDPRRVLSFFTEDPSVKLVNAFWYTGLKDTQDQR--- 67 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTEN-CGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 D L G+ V K+ KE+ ++ G+ K+++D+E+ VD F + + +V+FSG Sbjct: 68 --GFRDALISLGYTVRTKILKEYYDDISGKYSQKANLDIEIVVDMFNTVDQYDRVVLFSG 125 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 DG F + L+ K +T+VST M + +LR D ++DL ++ I + Sbjct: 126 DGDFERAIELLRSKSTHITVVST----EGMIARELRNATDRYIDLNDIRPAIEK 175 >gi|110597861|ref|ZP_01386144.1| conserved hypothetical protein [Chlorobium ferrooxidans DSM 13031] gi|110340586|gb|EAT59069.1| conserved hypothetical protein [Chlorobium ferrooxidans DSM 13031] Length = 280 Score = 77.4 bits (189), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 53/174 (30%), Positives = 94/174 (54%), Gaps = 15/174 (8%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTV---VGDPEQQFSPL 63 + A+FIDGANL+ + + LG+ ID+ +L+ F + + A YY V + F+ + Sbjct: 3 RAAVFIDGANLFYTQRHLGWQIDFSRLMAFFMTGYASVEANYYVPASEPVSEENAAFTRV 62 Query: 64 HPLLDWLHYNGFQVVAK-VAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122 L +G+++++K V K + G +K ++DVEL VDA SE + ++FSGD Sbjct: 63 ------LTAHGYRIISKPVKKIVNKETGEVIMKGNLDVELVVDALIGSEHYDTFILFSGD 116 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADY-FMDLAYLKNEIAR 175 F L+ AL+ K K+V + ST +++ +L + + + DL+ L++ I Sbjct: 117 SDFLPLLRALKEKGKEVIVYST----QGLSARELLAEPNVTYFDLSLLRDRIGH 166 >gi|119356319|ref|YP_910963.1| hypothetical protein Cpha266_0482 [Chlorobium phaeobacteroides DSM 266] gi|119353668|gb|ABL64539.1| protein of unknown function DUF88 [Chlorobium phaeobacteroides DSM 266] Length = 287 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 54/171 (31%), Positives = 90/171 (52%), Gaps = 7/171 (4%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 ++ A++IDGANL+ + ++LG+ ID+ +L+ F R + A YY V ++ + Sbjct: 4 KRAAVYIDGANLFFTQRSLGWQIDFSRLITFFLDRYASVEARYYVPVSEPASEEQAAFTR 63 Query: 66 LLDWLHYNGFQVVAK-VAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 +L +G+ + +K V K + G +K ++DVELAVDA + ++FSGD Sbjct: 64 VLA---AHGYILTSKPVKKIVNKTTGEIIIKGNLDVELAVDALVGEIAYDTFILFSGDSD 120 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 F L+ AL+ K K+V + ST + A + L F DLA L++ I Sbjct: 121 FLPLLRALKEKGKEVLVYST---EGISAWELLIEPGIDFHDLAGLRDRIGH 168 >gi|307305137|ref|ZP_07584886.1| protein of unknown function DUF88 [Sinorhizobium meliloti BL225C] gi|306902477|gb|EFN33072.1| protein of unknown function DUF88 [Sinorhizobium meliloti BL225C] Length = 92 Score = 74.7 bits (182), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 44/87 (50%), Positives = 54/87 (62%), Gaps = 4/87 (4%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFD REKIAL +DG NLYA+SKALGFDIDY KLL+AFR RA ++R T P Sbjct: 1 MFDHREKIALLMDGPNLYAASKALGFDIDYCKLLEAFRKRAYLLRGQLLRTFGRRPGNAD 60 Query: 61 SPL-HPL--LDWLHYNGFQVVAKVAKE 84 PL H L L W+ +G Q ++ + Sbjct: 61 DPLAHRLARLQWI-PDGHQADQRIHRH 86 >gi|319959094|gb|ADV90711.1| LabA [Nostoc linckia NK105] Length = 160 Score = 73.9 bits (180), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 51/154 (33%), Positives = 82/154 (53%), Gaps = 12/154 (7%) Query: 24 LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAK 83 LG +IDY KLL + ++RA++YT V E+Q L W+ NG++V+AK Sbjct: 3 LGIEIDYTKLLCRLTGGSRLLRAFFYTGVDRTNEKQ----QGFLLWMRRNGYRVIAKDLV 58 Query: 84 EFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVS 143 + + G K K+++DVE+AVD + + V+ SGDG V ++ + +V +VS Sbjct: 59 QLPD--GSK--KANLDVEIAVDMMALVDSYDTAVLVSGDGDLAYAVNSVSYRGVRVEVVS 114 Query: 144 TVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 SM SD L +D ++DL +K +I + P Sbjct: 115 L----RSMTSDSLINVSDRYLDLEAIKEDIQKTP 144 >gi|254787275|ref|YP_003074704.1| hypothetical protein TERTU_3357 [Teredinibacter turnerae T7901] gi|237685617|gb|ACR12881.1| conserved hypothetical protein [Teredinibacter turnerae T7901] Length = 258 Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 58/178 (32%), Positives = 89/178 (50%), Gaps = 15/178 (8%) Query: 7 KIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE----QQFS 61 K +F+D NL + + FD+ RKL++A V+RA Y V E + Sbjct: 3 KAGIFLDMENLNMNGGWGMRFDV-IRKLVEA--QGTTVLRANVYIAVDNAREKYDFEYRE 59 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 D + GF +V K + FT G + +K++ D++LAVDA Q+E L+++++ +G Sbjct: 60 KAQARRDKMRLAGFHIVEKEIRRFTNADGTQNIKANADLDLAVDAMLQAENLDYILLGTG 119 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN--EIARDP 177 DG F LV ALQ K K+V V+ S +LRR+ DY+ A + I DP Sbjct: 120 DGDFLRLVRALQSKGKRVDAVAI-----HNVSGELRREVDYYFHGATIPGLLPIKNDP 172 >gi|319959046|gb|ADV90687.1| LabA [Nostoc linckia EC102] gi|319959048|gb|ADV90688.1| LabA [Nostoc linckia EC105] gi|319959050|gb|ADV90689.1| LabA [Nostoc linckia EC106] gi|319959052|gb|ADV90690.1| LabA [Nostoc linckia EC109] gi|319959054|gb|ADV90691.1| LabA [Nostoc linckia EC113] gi|319959056|gb|ADV90692.1| LabA [Nostoc linckia EC119] gi|319959058|gb|ADV90693.1| LabA [Nostoc linckia EC121] gi|319959060|gb|ADV90694.1| LabA [Nostoc linckia EC205] gi|319959062|gb|ADV90695.1| LabA [Nostoc linckia EC206] gi|319959064|gb|ADV90696.1| LabA [Nostoc linckia EC220] gi|319959066|gb|ADV90697.1| LabA [Nostoc linckia EC221] gi|319959068|gb|ADV90698.1| LabA [Nostoc linckia EC222] gi|319959070|gb|ADV90699.1| LabA [Nostoc linckia EC326] gi|319959072|gb|ADV90700.1| LabA [Nostoc linckia NK217] gi|319959074|gb|ADV90701.1| LabA [Nostoc linckia EC501] gi|319959076|gb|ADV90702.1| LabA [Nostoc linckia EC505] gi|319959078|gb|ADV90703.1| LabA [Nostoc linckia EC519] gi|319959080|gb|ADV90704.1| LabA [Nostoc linckia EC521] gi|319959082|gb|ADV90705.1| LabA [Nostoc linckia EC602] gi|319959084|gb|ADV90706.1| LabA [Nostoc linckia EC724] gi|319959086|gb|ADV90707.1| LabA [Nostoc linckia EC204] gi|319959090|gb|ADV90709.1| LabA [Nostoc linckia EC210] gi|319959092|gb|ADV90710.1| LabA [Nostoc linckia EC322] gi|319959096|gb|ADV90712.1| LabA [Nostoc linckia NK207] gi|319959098|gb|ADV90713.1| LabA [Nostoc linckia EC703] gi|319959100|gb|ADV90714.1| LabA [Nostoc linckia EC720] Length = 173 Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 51/154 (33%), Positives = 82/154 (53%), Gaps = 12/154 (7%) Query: 24 LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAK 83 LG +IDY KLL + ++RA++YT V E+Q L W+ NG++V+AK Sbjct: 3 LGIEIDYTKLLCRLTGGSRLLRAFFYTGVDRTNEKQ----QGFLLWMRRNGYRVIAKDLV 58 Query: 84 EFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVS 143 + + G K K+++DVE+AVD + + V+ SGDG V ++ + +V +VS Sbjct: 59 QLPD--GSK--KANLDVEIAVDMMALVDSYDTAVLVSGDGDLAYAVNSVSYRGVRVEVVS 114 Query: 144 TVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 SM SD L +D ++DL +K +I + P Sbjct: 115 L----RSMTSDSLINVSDRYIDLEAIKEDIQKTP 144 >gi|119493449|ref|ZP_01624118.1| hypothetical protein L8106_08531 [Lyngbya sp. PCC 8106] gi|119452693|gb|EAW33872.1| hypothetical protein L8106_08531 [Lyngbya sp. PCC 8106] Length = 157 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 51/163 (31%), Positives = 88/163 (53%), Gaps = 14/163 (8%) Query: 17 LYASSKALGFDIDYRKLLKAFR---SRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYN 73 YA K G+ D R++L F+ S I++ A++YT + DP+ Q D L Sbjct: 2 FYAQQKN-GWFFDPRRVLTYFKHEQSDVILVNAFWYTGL-KDPQDQ----RGFRDALISL 55 Query: 74 GFQVVAKVAKEFTENC-GRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAAL 132 G+ V K+ KE+ ++ GR K+++D+E+ VD F + + +V+FSGDG F + L Sbjct: 56 GYTVRTKILKEYYDDSSGRYSQKANLDIEIVVDMFNTVDQYDRVVLFSGDGDFERAIELL 115 Query: 133 QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 + K +T+VST M + +LR D ++DL ++++I + Sbjct: 116 RSKNTHITVVST----EGMIARELRNATDRYIDLNDIRDQIEK 154 >gi|17232331|ref|NP_488879.1| hypothetical protein alr4839 [Nostoc sp. PCC 7120] gi|17133976|dbj|BAB76538.1| alr4839 [Nostoc sp. PCC 7120] Length = 157 Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 51/163 (31%), Positives = 87/163 (53%), Gaps = 14/163 (8%) Query: 17 LYASSKALGFDIDYRKLLKAFR---SRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYN 73 YA K G+ D R++L+ F+ S +I A++YT + DP+ Q D L Sbjct: 2 FYAQQKN-GWFFDPRRVLEYFKNEQSETTLINAFWYTGL-KDPQDQ----RGFRDALISL 55 Query: 74 GFQVVAKVAKEFTENC-GRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAAL 132 G+ V K+ KE+ ++ GR K+++D+E+ VD F + + +V+FSGDG F + L Sbjct: 56 GYTVRTKILKEYCDDSSGRYSQKANLDIEIVVDMFNTVDQYDRVVLFSGDGDFERAIELL 115 Query: 133 QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 + K +T+VST M + +LR D ++DL +++ I + Sbjct: 116 RSKNTHITVVST----EGMIARELRNATDRYIDLNDIRDRIEK 154 >gi|300866267|ref|ZP_07110978.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506] gi|300335738|emb|CBN56138.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506] Length = 157 Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 50/163 (30%), Positives = 87/163 (53%), Gaps = 14/163 (8%) Query: 17 LYASSKALGFDIDYRKLLKAFRS---RAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYN 73 YA K G+ D R++L+ F++ ++I A++YT + DP+ Q D L Sbjct: 2 FYAQQKN-GWFFDPRRVLEYFKNAQQNVMLINAFWYTGL-KDPQDQ----RGFRDALISL 55 Query: 74 GFQVVAKVAKEFTENC-GRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAAL 132 G+ V K+ KE+ ++ GR K+++D+E+ VD F + + +V+FSGDG F + L Sbjct: 56 GYTVRTKILKEYYDDASGRYSQKANLDIEIVVDMFNTVDQYDQVVLFSGDGDFERAIELL 115 Query: 133 QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 + K +T+VST M + +LR D ++DL ++ I + Sbjct: 116 RSKNTHITVVST----EGMIARELRNATDRYIDLNEIREHIEK 154 >gi|119509873|ref|ZP_01629016.1| hypothetical protein N9414_11729 [Nodularia spumigena CCY9414] gi|119465482|gb|EAW46376.1| hypothetical protein N9414_11729 [Nodularia spumigena CCY9414] Length = 236 Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 52/180 (28%), Positives = 87/180 (48%), Gaps = 14/180 (7%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 + R ++A+FIDG +L+ ++ LG +IDY KLL + ++RA++YT + Sbjct: 51 LENRGRVAIFIDGVSLFHTALQLGIEIDYLKLLCHLTGGSRLLRAFFYTAIDTSRPNAAR 110 Query: 62 P-----LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHL 116 P L W+ NG++VV K + K +++VE+AVD + + Sbjct: 111 PRPNEKQQGFLFWMRRNGYRVVTKEVQ-----LADHTKKHNLNVEIAVDMITLAPYYDTA 165 Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 ++ SGD V A+ +V +VS ++ SD L AD F+DL +K I +D Sbjct: 166 ILVSGDRDLAYAVNAVSATGSRVEVVSL----RALTSDSLIDVADEFIDLDRIKQYIQKD 221 >gi|194333277|ref|YP_002015137.1| hypothetical protein Paes_0433 [Prosthecochloris aestuarii DSM 271] gi|194311095|gb|ACF45490.1| protein of unknown function DUF88 [Prosthecochloris aestuarii DSM 271] Length = 294 Score = 70.5 bits (171), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 4/139 (2%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 K +FIDGANL+ + + +G+ ID+ +L+ F + A YY G Q+ + + Sbjct: 8 KAGVFIDGANLFFTQRHMGWQIDFSRLIAFFMQCFDSVEARYYVPESGALSQEQVAFNRM 67 Query: 67 LDWLHYNGFQVVAK-VAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125 L+ NG+ + +K V K + G +K ++DVEL VDA + + ++ SGD F Sbjct: 68 LE---ANGYTITSKPVKKIVNKETGEVVMKGNLDVELVVDALTTASRYDSFILVSGDSDF 124 Query: 126 TTLVAALQRKVKKVTIVST 144 L+ AL+ + K + + ST Sbjct: 125 LPLIRALRSRGKDIQVYST 143 >gi|662866|emb|CAA87004.1| orf1 [Nostoc sp. PCC 7120] Length = 157 Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 47/151 (31%), Positives = 82/151 (54%), Gaps = 13/151 (8%) Query: 29 DYRKLLKAFR---SRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEF 85 D R++L+ F+ S +I A++YT + DP+ Q D L G+ V K+ KE+ Sbjct: 13 DPRRVLEYFKNEQSETTLINAFWYTGL-KDPQDQ----RGFRDALISLGYTVRTKILKEY 67 Query: 86 TENC-GRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVST 144 ++ GR K+++D+E+ VD F + + +V+FSGDG F + L+ K +T+VST Sbjct: 68 CDDSSGRYSQKANLDIEIVVDMFNTVDQYDRVVLFSGDGDFERAIELLRSKNTHITVVST 127 Query: 145 VLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 M + +LR D ++DL +++ I + Sbjct: 128 ----EGMIARELRNATDRYIDLNDIRDRIEK 154 >gi|220910751|ref|YP_002486061.1| protein of unknown function DUF88 [Cyanothece sp. PCC 7425] gi|219867523|gb|ACL47860.1| protein of unknown function DUF88 [Cyanothece sp. PCC 7425] Length = 343 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 56/166 (33%), Positives = 85/166 (51%), Gaps = 14/166 (8%) Query: 9 ALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYT-TVVGDPEQQFSPLHPLL 67 A+FID ANL S++ L +DY+K+ + R ++YT GD Q+ L Sbjct: 171 AIFIDAANLEYSARDLNLQLDYQKIYRFLTKGMKQPRVFFYTGERPGDARQKKQ-----L 225 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTT 127 DWL G+Q+V K K + G + K+++DVELA+D + ++ L V+ SGDG FT Sbjct: 226 DWLTGIGYQLVTK--KIVRQPGGTE--KANLDVELALDMYRLADTLSRAVLVSGDGDFTQ 281 Query: 128 LVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 + L K+ I V+S S S L + A+ ++DL EI Sbjct: 282 ALQLL----KQQGIAVDVISFRSCTSKALIKAANRYIDLEQRTAEI 323 >gi|218295249|ref|ZP_03496085.1| protein of unknown function DUF88 [Thermus aquaticus Y51MC23] gi|218244452|gb|EED10977.1| protein of unknown function DUF88 [Thermus aquaticus Y51MC23] Length = 180 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 49/171 (28%), Positives = 87/171 (50%), Gaps = 17/171 (9%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 +IALFIDG+ +Y ++K LG+++D+R+++ F + + A+YY + DPE + Sbjct: 2 RIALFIDGSYMYQAAKRLGWNVDHRRVITQFATPEQLYNAFYYVPIT-DPEDERQ--QRF 58 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126 +D L + G+ V +++ + G R ++ M A D + + V+ SG G Sbjct: 59 IDALVFMGYTVRSRLVR------GEARFEAMM----ATDLLTTAPRWDRAVVASGSGELA 108 Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 AL+ K+V + L +A +LR QAD F++LA + + R P Sbjct: 109 HAFQALRAMGKEVHL----LGVHELADLELRNQADRFLNLAEWREVLERTP 155 >gi|291297150|ref|YP_003508548.1| hypothetical protein Mrub_2781 [Meiothermus ruber DSM 1279] gi|290472109|gb|ADD29528.1| protein of unknown function DUF88 [Meiothermus ruber DSM 1279] Length = 190 Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 51/171 (29%), Positives = 86/171 (50%), Gaps = 21/171 (12%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVV--GDPEQQFSPLH 64 K ALFIDG+ +Y ++K LG++ID+RK + F + A+YY V D QQ Sbjct: 2 KTALFIDGSYMYDAAKRLGWNIDHRKAIGVFSKPEDLYNAFYYAPVTDSNDERQQ----- 56 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 LD L + G+ V ++ E G R ++ + +L V A E V+ SG G Sbjct: 57 KFLDALVFMGYTVRSR------ETHGDPRFEAMIATDLLVTAPR----WERAVVASGSGD 106 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 ++AL+ + K++ ++ P + +LR Q+D ++DL L+ ++ R Sbjct: 107 LAHTLSALRAQGKEIHLLGV----PELTDLELRNQSDRYLDLRELQAQLER 153 >gi|150378220|ref|YP_001314815.1| hypothetical protein Smed_6284 [Sinorhizobium medicae WSM419] gi|150032767|gb|ABR64882.1| conserved hypothetical protein [Sinorhizobium medicae WSM419] Length = 48 Score = 67.4 bits (163), Expect = 9e-10, Method: Composition-based stats. Identities = 33/45 (73%), Positives = 38/45 (84%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIR 45 MFD REKIAL IDGANL+A+SKALGF+ID+ KLL AFR RA + R Sbjct: 1 MFDQREKIALLIDGANLHAASKALGFEIDFCKLLSAFRRRASLPR 45 >gi|318040287|ref|ZP_07972243.1| hypothetical protein SCB01_01212 [Synechococcus sp. CB0101] Length = 175 Score = 67.4 bits (163), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 52/171 (30%), Positives = 87/171 (50%), Gaps = 10/171 (5%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLK-AFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 ++AL +DG +++ + LG+ D R+LL A + + I + ++ T + DP Q P Sbjct: 2 QLALAVDGHSMFYVQQKLGWFFDPRRLLAYATATPGVEISSAFWYTGLKDPTDQ----RP 57 Query: 66 LLDWLHYNGFQVVAKVAKEFT-ENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 D L GF V K +E E R+ ++++DVE+A+D + + + + SG Sbjct: 58 FRDALTSLGFTVRTKPLREVGGEADQRQFARANLDVEVAIDLLAVAHRTDEVWLLSGSRD 117 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 LV L+ K KV +VST M +LR AD F+DLA L+ ++ + Sbjct: 118 LERLVEVLRIKGLKVVLVST----DGMVPRELRNAADRFLDLAELRPQLEK 164 >gi|114764533|ref|ZP_01443758.1| hypothetical protein 1100011001295_R2601_11629 [Pelagibaca bermudensis HTCC2601] gi|114543100|gb|EAU46119.1| hypothetical protein R2601_11629 [Roseovarius sp. HTCC2601] Length = 60 Score = 67.4 bits (163), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 31/59 (52%), Positives = 45/59 (76%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59 MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + E + Sbjct: 1 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFVRRGKMVRAFYYTALLENDEYR 59 >gi|330984094|gb|EGH82197.1| hypothetical protein PLA107_03594 [Pseudomonas syringae pv. lachrymans str. M301315] Length = 282 Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 49/161 (30%), Positives = 86/161 (53%), Gaps = 14/161 (8%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLK-AFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 E++ ++ID AN+ A+ GF++DY L + A R A + Y++ ++ H Sbjct: 4 ERVGVYIDQANVNANQ---GFEMDYSVLREFALRGGARGVHLNVYSSTNPAKAERDPAWH 60 Query: 65 PLL----DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 L + G+ + K AKE+ E R VK++ DV++AVD E + L+ +++ S Sbjct: 61 SRLKAYQSQIRSMGYHINLKEAKEYGEG-DRLVVKANADVDIAVDVLESASKLDRILLVS 119 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161 GDG F++LVAA +R+ +V +++ S+QLR +D Sbjct: 120 GDGDFSSLVAAARRQGARVEVLAF-----DHCSEQLRGASD 155 >gi|328951205|ref|YP_004368540.1| Domain of unknown function DUF88 [Marinithermus hydrothermalis DSM 14884] gi|328451529|gb|AEB12430.1| Domain of unknown function DUF88 [Marinithermus hydrothermalis DSM 14884] Length = 186 Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 49/174 (28%), Positives = 85/174 (48%), Gaps = 20/174 (11%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP--EQQFSPL 63 E+I LFIDG+ +Y+++K +G+++D+R++L+ FR + A+YY + DP E+Q Sbjct: 2 ERIGLFIDGSYIYSAAKRMGWNVDHRRVLEHFRGDRALYNAFYYAPIT-DPNDERQLK-- 58 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 LD L + G+ V + + + N G V L D + E +I SG Sbjct: 59 --FLDALVFMGYTVRSHEVRGESPNLG---------VYLVTDLLLTAPRWEVALISSGAR 107 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 V A++ K+V + L P + +LR +D F+D+ + + R P Sbjct: 108 EIAPAVEAVRAMGKEVRL----LGLPELTDLELRSSSDRFIDIREYREVLERQP 157 >gi|254424011|ref|ZP_05037729.1| conserved hypothetical protein [Synechococcus sp. PCC 7335] gi|196191500|gb|EDX86464.1| conserved hypothetical protein [Synechococcus sp. PCC 7335] Length = 157 Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 48/163 (29%), Positives = 84/163 (51%), Gaps = 14/163 (8%) Query: 17 LYASSKALGFDIDYRKLLKAFRSR---AIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYN 73 YA K G+ D +++L+ F ++ A++YT + DP+ Q D L Sbjct: 2 FYAQQKN-GWFFDPKRVLEYFLKEIEGNVLGNAFWYTGL-KDPQDQ----RAFRDALISL 55 Query: 74 GFQVVAKVAKEFTENC-GRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAAL 132 G+ V K+ KE+ ++ GR K+++D+E+ VD F + + +V+FSGDG F + L Sbjct: 56 GYTVRTKILKEYYDDASGRYSQKANLDIEIVVDMFNTVDQYDRVVLFSGDGDFERAIELL 115 Query: 133 QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 + K +T+VST M + +LR D ++DL ++ I + Sbjct: 116 RSKSTHITVVST----EGMIARELRNVTDRYIDLNSIRRRIEK 154 >gi|83646130|ref|YP_434565.1| hypothetical protein HCH_03390 [Hahella chejuensis KCTC 2396] gi|83634173|gb|ABC30140.1| uncharacterized conserved protein [Hahella chejuensis KCTC 2396] Length = 303 Score = 65.1 bits (157), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 52/151 (34%), Positives = 78/151 (51%), Gaps = 12/151 (7%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRA-IVIRAYYYTTVVGDPEQQFSPLH- 64 K +FID NL G +DY ++K +VIRA Y V D EQ+ + Sbjct: 7 KAGIFIDNDNLIYGQDREG--LDYSAIIKFVEDLGMLVIRANTYMAVDEDREQKDAKYRQ 64 Query: 65 ---PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 + GF+V K K++ + G K ++D+ELAVDA Q++ L+++++ SG Sbjct: 65 EQRKHRSDIRNAGFRVFEKPLKKYQQEDGTVYAKGNVDLELAVDALLQTDNLDYVLLGSG 124 Query: 122 DGCFTTLVAALQRKVKKVTI-----VSTVLS 147 DG F+ +V+ALQ K KKV +ST LS Sbjct: 125 DGDFSRVVSALQHKGKKVEAFAFDNISTELS 155 >gi|254417286|ref|ZP_05031030.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC 7420] gi|196175939|gb|EDX70959.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC 7420] Length = 110 Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/103 (34%), Positives = 64/103 (62%), Gaps = 8/103 (7%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 + + R ++A+FIDG+NL+ ++ LG +IDY KLL + + ++R+++YT V E+Q Sbjct: 16 VLENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLVRLTAGSRLLRSFFYTGVDRTNEKQ- 74 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELA 103 L W+ NG++V+AK + + G K K+++DVE+A Sbjct: 75 ---QGFLLWMRRNGYRVIAKDLVQLPD--GSK--KANLDVEIA 110 >gi|320451037|ref|YP_004203133.1| hypothetical protein TSC_c19750 [Thermus scotoductus SA-01] gi|320151206|gb|ADW22584.1| hypothetical protein TSC_c19750 [Thermus scotoductus SA-01] Length = 182 Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 44/169 (26%), Positives = 85/169 (50%), Gaps = 17/169 (10%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 ++ALFIDG+ +Y ++K LG+++D+R++L F + + A+YY + DPE + Sbjct: 2 RVALFIDGSYMYLATKRLGWNVDHRRVLTQFATPEQLYNAFYYVPIT-DPEDERQ--QRF 58 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126 +D L + G+ V +++ + G R ++ M A D + + ++ SG G Sbjct: 59 IDALVFMGYTVRSRLVR------GEARFEAMM----ATDLLTTAPRWDRAIVASGSGELA 108 Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 + L+ K++ + L +A +LR QAD F++L + + R Sbjct: 109 HTFSTLRAMGKEIHL----LGVHELADLELRNQADRFLNLPEWREVLER 153 >gi|126655888|ref|ZP_01727327.1| hypothetical protein CY0110_19792 [Cyanothece sp. CCY0110] gi|126623367|gb|EAZ94072.1| hypothetical protein CY0110_19792 [Cyanothece sp. CCY0110] Length = 103 Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 34/103 (33%), Positives = 59/103 (57%), Gaps = 5/103 (4%) Query: 74 GFQVVAKVAKEFTENC-GRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAAL 132 G+ V K+ KE+ ++ GR K+++D+E+ VD F E + +++FSGDG F + L Sbjct: 2 GYTVRTKILKEYYDDTSGRYSQKANLDIEIVVDMFNTVEQYDRVILFSGDGDFERAIELL 61 Query: 133 QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 + K +T+VST M + +LR D ++DL +K+ I + Sbjct: 62 RSKNTHITVVST----EGMIARELRNATDRYIDLNDIKDSIEK 100 >gi|313127027|ref|YP_004037297.1| hypothetical protein Hbor_22910 [Halogeometricum borinquense DSM 11551] gi|312293392|gb|ADQ67852.1| uncharacterized conserved protein [Halogeometricum borinquense DSM 11551] Length = 165 Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 47/165 (28%), Positives = 83/165 (50%), Gaps = 14/165 (8%) Query: 4 PREKIALFIDGANLYASSKAL-GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 P +++A+ D NLY S+++L +IDY LL+ S + RA Y PE++ Sbjct: 6 PGQRVAILADAQNLYHSAQSLYSRNIDYSSLLEKGVSDRTLTRAIAYVVRADSPEEE--- 62 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122 D L GF+ K K F G K+ DV +++DA + ++ +V+ +GD Sbjct: 63 --SFFDALVEIGFETKIKDIKTF----GDGSKKADWDVGMSLDAVTLANHVDTVVLCTGD 116 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 G F+ L + L+ + +V +++ S +D+L AD F+D++ Sbjct: 117 GDFSRLCSHLRHEGVRVEVIAFKES----TADELIEAADTFLDMS 157 >gi|328952819|ref|YP_004370153.1| Domain of unknown function DUF88 [Desulfobacca acetoxidans DSM 11109] gi|328453143|gb|AEB08972.1| Domain of unknown function DUF88 [Desulfobacca acetoxidans DSM 11109] Length = 297 Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 45/164 (27%), Positives = 83/164 (50%), Gaps = 16/164 (9%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLK-AFRSRAIVIRAYYYTT-----VVGDPEQQF 60 KI +++D N+ + G+ + Y L + A R+ ++R Y V DP + Sbjct: 30 KIGVYVDSMNIVRNG---GYGMRYEVLRRFATRNGGQIVRLNAYVALDEERVGADP--NY 84 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 + + L GF+V+ K + FT+ GR K++ D+++A+D QS+ L+ +++ + Sbjct: 85 NATLNFISTLRDLGFKVIEKPIRWFTDESGRTYGKANADMDMALDIISQSDRLDMVLLLT 144 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 GDG F +V +Q K +V +V+ + S LRR+ D F+ Sbjct: 145 GDGDFCNVVTMVQNKGCRVELVAF-----ANVSSWLRREVDLFV 183 >gi|282895638|ref|ZP_06303763.1| Protein of unknown function DUF88 [Raphidiopsis brookii D9] gi|281199332|gb|EFA74197.1| Protein of unknown function DUF88 [Raphidiopsis brookii D9] Length = 156 Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 34/88 (38%), Positives = 52/88 (59%), Gaps = 5/88 (5%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 R ++A+FIDG NL+ ++ +G +IDY KLL + ++RA++YT V E+Q Sbjct: 56 RGRVAIFIDGLNLFHAALQIGIEIDYVKLLCRLTQTSRLLRAFFYTGVDTSKEKQ----Q 111 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRK 92 L W+ NG++VV K TEN G+K Sbjct: 112 GFLLWMRRNGYRVVTKDIIALTEN-GKK 138 >gi|317050842|ref|YP_004111958.1| hypothetical protein Selin_0654 [Desulfurispirillum indicum S5] gi|316945926|gb|ADU65402.1| hypothetical protein Selin_0654 [Desulfurispirillum indicum S5] Length = 290 Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 47/163 (28%), Positives = 88/163 (53%), Gaps = 13/163 (7%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLK-AFRSRAIVIRAYYYTTVVGDPEQQFSP--- 62 K+ +++D ANL + G+ + Y L + A R A ++R Y + D + +P Sbjct: 20 KVGVYVDVANLVRNG---GYGMRYEVLREFACRDGAELVRLNAYVSFDVDRASKDAPYKY 76 Query: 63 -LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 + L G++V+ K K + + G + K++ D+++AVDA QSE L+ +++ +G Sbjct: 77 KMTNFYAILRDFGYKVIEKPVKWYVDESGNRFGKANADLDMAVDALLQSENLDRVLLVTG 136 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 DG F +V ALQ K +V ++ +++SD L++++D FM Sbjct: 137 DGDFVQVVRALQNKGCRVETMAF----QNISSD-LKKESDMFM 174 >gi|113474390|ref|YP_720451.1| hypothetical protein Tery_0526 [Trichodesmium erythraeum IMS101] gi|110165438|gb|ABG49978.1| protein of unknown function DUF88 [Trichodesmium erythraeum IMS101] Length = 295 Score = 61.2 bits (147), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 48/170 (28%), Positives = 81/170 (47%), Gaps = 13/170 (7%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 + + L ID ANL ++K+L +DY +L + + A Y + +Q Sbjct: 137 QRRTLLAIDSANLDGAAKSLNMKVDYERLKRYVNVHFGSLEARIYVGKYDNSSRQ----K 192 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 ++L NG+ V K + VK+++DV+LA+D E +++V+ SGDG Sbjct: 193 LWFNYLEKNGYVVKTKPVTVYGNT-----VKANVDVDLALDIREHGVNFKNVVLCSGDGD 247 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 + LV LQ + I VL+ P + L+RQAD ++ L + EI+ Sbjct: 248 YLPLVEQLQ----GLGIKVIVLASPGHTNHFLQRQADEYISLIDIMGEIS 293 >gi|317970442|ref|ZP_07971832.1| hypothetical protein SCB02_12967 [Synechococcus sp. CB0205] Length = 168 Score = 60.8 bits (146), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 46/172 (26%), Positives = 90/172 (52%), Gaps = 12/172 (6%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLK--AFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 ++AL +DG +++ + LG+ D R+LL+ +S + A++YT + +Q+ Sbjct: 2 QLALAVDGHSMFYVQQKLGWFFDPRRLLEYATAQSGVELGSAFWYTGLKDATDQR----- 56 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKR-VKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 P D L GF V K +E + +++ ++++DVE+A+D + ++ + + SG Sbjct: 57 PFRDALTSLGFTVRTKPLREVGHDSDQRQFARANLDVEIAIDLMAVAHRIDEVWVMSGSR 116 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 L+ L+ + KV ++ST M +LR AD F+DL+ LK ++ + Sbjct: 117 DLERLLEVLRIRGLKVVLMST----EGMVPRELRNAADRFVDLSSLKPQLEK 164 >gi|219883176|ref|YP_002478338.1| protein of unknown function DUF88 [Cyanothece sp. PCC 7425] gi|219867301|gb|ACL47639.1| protein of unknown function DUF88 [Cyanothece sp. PCC 7425] Length = 356 Score = 60.5 bits (145), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 47/160 (29%), Positives = 79/160 (49%), Gaps = 14/160 (8%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTV-VGDPEQQFSPLHPL 66 +A+ +D AN+Y LG ++Y +L+ ++ + ++YT + GD QQ Sbjct: 188 LAILVDAANIYHCGNELGVKVNYDQLIPGLQAGFESSQVWFYTGLKSGDFRQQ-----RF 242 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126 L L G+QVV K + + K+++DVELA++ + +E +++ SGDG Sbjct: 243 LASLRQQGYQVVTKRVVRHEDG----KEKANLDVELALEMVKLAERYSDILLLSGDGDLA 298 Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 V A ++K +V ++S S S L R AD F DL Sbjct: 299 CAVRAARQKGARVEVISF----RSRTSQDLIRAADDFRDL 334 >gi|225851407|ref|YP_002731641.1| hypothetical protein PERMA_1879 [Persephonella marina EX-H1] gi|225645689|gb|ACO03875.1| conserved hypothetical protein [Persephonella marina EX-H1] Length = 224 Score = 60.5 bits (145), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 46/175 (26%), Positives = 81/175 (46%), Gaps = 15/175 (8%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVG-----DPEQ 58 P EK+A+FIDG N++ + + I+Y+KL+ R ++RAY+YT + D + Sbjct: 19 PNEKVAIFIDGGNMFHACNYMQIKINYKKLIDILRKDRWLLRAYFYTGIPSGDLPRDVRE 78 Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHL 116 Q L+ L G +V K+ E ++ +D+ LA D + + Sbjct: 79 QLRKQQGFLNELQNLGIKVKTMPLKKTPEGY----IEKGIDILLATDMVSLAFRNAYDTA 134 Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 ++ SGD + +V +Q K+V S +S +LR+ D F+ L +K+ Sbjct: 135 ILVSGDSDYVPVVKEIQELGKRVENASF----KRTSSYELRKVCDEFILLDNIKH 185 >gi|320160886|ref|YP_004174110.1| hypothetical protein ANT_14820 [Anaerolinea thermophila UNI-1] gi|319994739|dbj|BAJ63510.1| hypothetical protein ANT_14820 [Anaerolinea thermophila UNI-1] Length = 302 Score = 60.5 bits (145), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 47/159 (29%), Positives = 83/159 (52%), Gaps = 9/159 (5%) Query: 9 ALFIDGANLYASS-KALGFDIDYRKLLKAFRSRAIVIRAY--YYTTVVGDPEQQFSPLHP 65 +F+D AN+Y + + + +D+ R+ + AI + AY Y D E+ Sbjct: 34 GVFVDVANIYLNGGQRMQYDV-LREFACRDHAEAIRLNAYVTYDVERAEDDEEYRKGAQN 92 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125 L G++V+ K +T+ G + K++ D+++AVDA QS+ L+ ++I SGDG F Sbjct: 93 FHGALRDLGYKVIVKDIHWYTDVNGIRVAKANADLDMAVDALTQSDYLDRVLIASGDGDF 152 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 +V ALQ K +V +V S++L+ +AD+F+ Sbjct: 153 VQVVRALQNKGCRVEVVGL-----DNVSNRLKAEADFFI 186 >gi|289582398|ref|YP_003480864.1| hypothetical protein Nmag_2746 [Natrialba magadii ATCC 43099] gi|289531951|gb|ADD06302.1| protein of unknown function DUF88 [Natrialba magadii ATCC 43099] Length = 165 Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 51/165 (30%), Positives = 87/165 (52%), Gaps = 16/165 (9%) Query: 4 PREKIALFIDGANLYASSKAL-GFDIDYRKLL-KAFRSRAIVIRAYYYTTVVGDPEQQFS 61 P +++A+ +D NLY S+++L +IDY LL KA + R + RA Y PE++ Sbjct: 6 PGQRVAVLVDAQNLYHSAQSLHSRNIDYSALLSKAVQDRQLT-RAIAYVIRADAPEEE-- 62 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 D L GF+ K K F++ G K K+ DV +++DA + ++ +V+ +G Sbjct: 63 ---SFFDALVDIGFETKIKDIKTFSD--GTK--KADWDVGMSLDAVTLANHVDTVVLCTG 115 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 DG F+ L + L+ + +V V++ S +D+L D F+DL Sbjct: 116 DGDFSRLCSHLRHEGVRV----EVMAFESSTADELIDATDTFLDL 156 >gi|297567250|ref|YP_003686222.1| hypothetical protein Mesil_2873 [Meiothermus silvanus DSM 9946] gi|296851699|gb|ADH64714.1| protein of unknown function DUF88 [Meiothermus silvanus DSM 9946] Length = 213 Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 44/169 (26%), Positives = 82/169 (48%), Gaps = 17/169 (10%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 +IALFIDG+ +Y ++K LG+++D+R+++ F + + A+YY + D E + Sbjct: 6 RIALFIDGSYMYNAAKRLGWNVDHRRVIGQFATPEELYNAFYYAPIT-DSEDERQ--QKF 62 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126 LD L + G+ V ++ R + + +A D + + V+ SG G Sbjct: 63 LDALVFMGYTVRSREV----------RGEPRFEALIATDMLITAPRWDRAVVASGAGELA 112 Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 + AL+ + K++ +V + LR QAD F+DL ++ + R Sbjct: 113 HALGALRAQGKELYLVGVA----ELTDLWLRNQADRFLDLRDMREGLER 157 >gi|5441510|emb|CAB46751.1| hypothetical protein [Synechococcus elongatus] Length = 142 Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 41/135 (30%), Positives = 73/135 (54%), Gaps = 14/135 (10%) Query: 40 RAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEF-TENCGRKRVKSSM 98 + +++ A++YT + D + Q S L++ G+ V K+ KE+ E+ G+ K+++ Sbjct: 8 KIVLVNAFWYTGL-KDMQDQRSFRDALINL----GYTVRTKLLKEYYDESLGKYYQKANL 62 Query: 99 DVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRR 158 D+E+ +D F + +V+FSGDG F + L+ K +T+VST M + +LR Sbjct: 63 DIEIVIDMFNTVGQYDRVVLFSGDGDFERAIELLRSKNTHITVVST----EGMIARELRN 118 Query: 159 QADYFMDLAYLKNEI 173 D ++DL NEI Sbjct: 119 ATDRYIDL----NEI 129 >gi|300712124|ref|YP_003737938.1| hypothetical protein HacjB3_13825 [Halalkalicoccus jeotgali B3] gi|299125807|gb|ADJ16146.1| hypothetical protein HacjB3_13825 [Halalkalicoccus jeotgali B3] Length = 165 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 48/164 (29%), Positives = 84/164 (51%), Gaps = 14/164 (8%) Query: 4 PREKIALFIDGANLYASSKAL-GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 P +++A+ +D NLY S+ +L +IDY LL+ ++RA Y PE++ S Sbjct: 6 PNQRVAVLVDSQNLYHSAHSLYSRNIDYSALLEEAVGGRELVRAIAYVIRADSPEEE-SF 64 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122 L+D GF+ K K F G K+ DV +++DA + ++ +V+ +GD Sbjct: 65 FEALIDI----GFETKIKDIKTF----GDGSKKADWDVGMSLDAVTLASHVDTVVLCTGD 116 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 G F+ L + L+ + +V +++ PS A ++L D F+DL Sbjct: 117 GDFSRLCSHLRHQGVRVEVMAL---GPSTA-EELIEATDSFVDL 156 >gi|51244756|ref|YP_064640.1| hypothetical protein DP0904 [Desulfotalea psychrophila LSv54] gi|50875793|emb|CAG35633.1| hypothetical protein DP0904 [Desulfotalea psychrophila LSv54] Length = 258 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 44/169 (26%), Positives = 81/169 (47%), Gaps = 13/169 (7%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLK-AFRSRAIVIRAYYYTTV----VGD 55 M++ K +++D N+ G+ + Y L++ A A ++RA Y D Sbjct: 1 MYNDMLKTGIYVDAENIRMCG---GYGMRYDVLVELAGSGNAALLRANSYVAEDRERTKD 57 Query: 56 PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEH 115 + L+ D L GF+V+ K K F ++ G K++ D++LA+DA Q+ L+ Sbjct: 58 DAEYRHKLYRYHDVLRQCGFKVIKKFVKHFVDDEGILTTKANADMDLAIDALLQARNLDR 117 Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 +++ +GD F L+ ALQ +V +++ S +L+ AD F+ Sbjct: 118 IILLTGDSDFIRLILALQNMGCRVEVIAF-----KHVSQELKECADNFL 161 >gi|195953568|ref|YP_002121858.1| protein of unknown function DUF88 [Hydrogenobaculum sp. Y04AAS1] gi|195933180|gb|ACG57880.1| protein of unknown function DUF88 [Hydrogenobaculum sp. Y04AAS1] Length = 176 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 45/165 (27%), Positives = 80/165 (48%), Gaps = 13/165 (7%) Query: 3 DPREKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 + R+ +FIDG NLY K L F +D KL++ F + + ++Y + E+Q Sbjct: 6 NSRKIAGIFIDGTNLYFVQKQFLDFKVDILKLVRYFANYFAIYNTFFYLAYKEEEEKQ-- 63 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 + L + G V+ K K+ + +K ++DV+LA+D + + ++ +G Sbjct: 64 --NKFYRMLTFGGVTVIKKAVKQLKDGS----MKGNLDVDLAMDCLLTKDNYDVAILVTG 117 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 D F L+ L+ K++ +VST D S S +L D F++L Sbjct: 118 DSDFEKLINILRTFGKQIIVVST--KDSS--SIELVNICDLFVEL 158 >gi|87302148|ref|ZP_01084973.1| hypothetical protein WH5701_08104 [Synechococcus sp. WH 5701] gi|87283073|gb|EAQ75029.1| hypothetical protein WH5701_08104 [Synechococcus sp. WH 5701] Length = 260 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 44/166 (26%), Positives = 82/166 (49%), Gaps = 10/166 (6%) Query: 10 LFIDGANLYASSKALGFDIDYRKLLK-AFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLD 68 + +DG ++ + + LG+ D R+LL+ A + + Y+ T + DP Q P D Sbjct: 54 VIVDGHGMFYAQQKLGWFFDPRRLLELATADPGVELDGAYWYTGLKDPADQ----RPFRD 109 Query: 69 WLHYNGFQVVAKVAKEFTENC-GRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTT 127 L G+ V +K +EF + R+ ++++DVE+ +D + L+ + + SG Sbjct: 110 ALTSLGYTVRSKPLREFGADPEHRQFARANLDVEICLDLMMVAHRLDEVWLLSGSRDLER 169 Query: 128 LVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 LV L+ K ++T+ L+ M +LR D F+DLA + ++ Sbjct: 170 LVETLRAKGIRITL----LNADGMVPRELRNAVDVFLDLAGRRKQL 211 >gi|284164086|ref|YP_003402365.1| hypothetical protein Htur_0796 [Haloterrigena turkmenica DSM 5511] gi|284013741|gb|ADB59692.1| protein of unknown function DUF88 [Haloterrigena turkmenica DSM 5511] Length = 165 Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 51/166 (30%), Positives = 90/166 (54%), Gaps = 16/166 (9%) Query: 4 PREKIALFIDGANLYASSKAL-GFDIDYRKLL-KAFRSRAIVIRAYYYTTVVGDPEQQFS 61 P +++A+ +D NLY ++++L +IDY LL KA + R + RA Y PE++ S Sbjct: 6 PGQRVAVLVDAQNLYHTAQSLHSRNIDYSALLDKAVQDRQLT-RAIAYVIRADSPEEE-S 63 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 L+D GF+ K K F++ G K K+ DV +++DA + ++ +V+ +G Sbjct: 64 FFEALIDI----GFEPKIKDIKTFSD--GTK--KADWDVGMSLDAVTLANHVDTVVLCTG 115 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 DG F+ L + L+ + +V V++ S +++L AD F+DL Sbjct: 116 DGDFSRLCSHLRHEGVRV----EVMAFESSTAEELIAAADSFVDLG 157 >gi|320352193|ref|YP_004193532.1| hypothetical protein Despr_0047 [Desulfobulbus propionicus DSM 2032] gi|320120695|gb|ADW16241.1| hypothetical protein Despr_0047 [Desulfobulbus propionicus DSM 2032] Length = 258 Score = 57.4 bits (137), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 38/145 (26%), Positives = 73/145 (50%), Gaps = 14/145 (9%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLK-AFRSRAIVIRAYYY-------TTVVGDPEQ 58 K A+++D N+ S G+ + Y L+ A + ++++RA Y T + Q Sbjct: 3 KTAIYVDAENIKMSG---GYGMRYDVLVDLANNTNSVMLRANCYLAEDHERTQRDAEYRQ 59 Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVI 118 + H +L GF+++ K + F + G K++ D++LA+DA Q+ L+ +++ Sbjct: 60 KVYSYHNILRQC---GFKIIKKYVRRFKDEDGNITTKANADMDLAIDALLQARNLDRIIL 116 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVS 143 +GDG F L+ ALQ +V ++ Sbjct: 117 LTGDGDFLRLIIALQNMGCRVEVIG 141 >gi|222479108|ref|YP_002565345.1| protein of unknown function DUF88 [Halorubrum lacusprofundi ATCC 49239] gi|222452010|gb|ACM56275.1| protein of unknown function DUF88 [Halorubrum lacusprofundi ATCC 49239] Length = 165 Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 47/165 (28%), Positives = 84/165 (50%), Gaps = 14/165 (8%) Query: 4 PREKIALFIDGANLYASSKAL-GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 P +++A+ D NLY S++++ +IDY LL+ + ++RA Y PE++ Sbjct: 6 PDQRVAVLADSQNLYHSAQSVYSRNIDYSGLLEEAVNDRSLVRAIAYVIRADSPEEE--- 62 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122 + L GF+ K K F + G K K+ D+ +++DA + ++ +VI +GD Sbjct: 63 --SFFEALRDIGFETKIKEIKTFAD--GSK--KADWDLGMSLDAVSLASHVDTVVICTGD 116 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 G F L + L+ + +V + + A+D+L AD F+DLA Sbjct: 117 GDFARLCSHLRHEGVRV----EAMGFGNSAADELIDAADDFVDLA 157 >gi|288818569|ref|YP_003432917.1| hypothetical protein HTH_1263 [Hydrogenobacter thermophilus TK-6] gi|288787969|dbj|BAI69716.1| hypothetical protein HTH_1263 [Hydrogenobacter thermophilus TK-6] gi|308752160|gb|ADO45643.1| protein of unknown function DUF88 [Hydrogenobacter thermophilus TK-6] Length = 165 Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 13/164 (7%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +++ +FIDGAN Y K L ID KL++ F+ + ++Y E+Q Sbjct: 2 KKRAGIFIDGANFYFIQKHILHQKIDLIKLVEYFKRDYTIYNTFFYLAYREGDEKQ---- 57 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 + L ++G VV K K+ + K S+DV++A+D + + V+ SGD Sbjct: 58 ENFIKLLAFSGITVVKKPIKQLKDGT----YKGSLDVDMALDVLLTKDNYDVAVLCSGDS 113 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F LV L+ K+V VST +S +L D ++DLA Sbjct: 114 DFERLVWVLRDFSKEVICVST----KESSSVELVNACDRYIDLA 153 >gi|195953366|ref|YP_002121656.1| protein of unknown function DUF88 [Hydrogenobaculum sp. Y04AAS1] gi|195932978|gb|ACG57678.1| protein of unknown function DUF88 [Hydrogenobaculum sp. Y04AAS1] Length = 195 Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 51/174 (29%), Positives = 84/174 (48%), Gaps = 23/174 (13%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE------Q 58 +EK+ +FIDG+N++ K F +DY KL++ ++RAY+Y+ + D + + Sbjct: 3 KEKLVIFIDGSNVFHGLKNETFRLDYLKLIEFLTGDRYLVRAYFYSALPSDKDVDKQSKE 62 Query: 59 QFSPLHPLLDWLHYNGFQV-VAKVAKEFTENCGRKRVKSSMDVELAVD--AFEQSEGLEH 115 F+ L+ L + G +V +AK+ K N K V D+ LA D + + Sbjct: 63 GFNKQKKFLEDLAFMGIKVKLAKLRKLPDGNFLEKEV----DIMLATDMLSLAYKNAYDS 118 Query: 116 LVIFSGDGCFTTLVAALQ---RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 V+ SGD F+ V A+Q ++V+ T T +S LRR D F+ L Sbjct: 119 CVLVSGDSDFSYTVEAVQFLGKRVENATFKKT-------SSYSLRRLCDKFIYL 165 >gi|254481697|ref|ZP_05094940.1| conserved hypothetical protein [marine gamma proteobacterium HTCC2148] gi|214037826|gb|EEB78490.1| conserved hypothetical protein [marine gamma proteobacterium HTCC2148] Length = 200 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 15/161 (9%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ-QFSPL 63 EKI +F+D N+Y + + G + DY K ++ AY Y T GD +Q QF + Sbjct: 44 EKITIFVDVQNIYYTCRQTYGRNFDYNKFWAEVTQNRELVGAYAYATDRGDAKQMQFQSI 103 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 LH GF V K + + K+ D+ +A+D +E ++ + +V+ +GDG Sbjct: 104 ------LHAIGFTVKLKPVLKRRDG----STKADWDIGIALDVYEAAQQCDTVVLLTGDG 153 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F L+ ++R+ V V P++ SD L A F+ Sbjct: 154 DFGLLLDRIKRRFDTNCEVYGV---PALTSDILISAASRFV 191 >gi|260901483|ref|ZP_05909878.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ4037] gi|308107667|gb|EFO45207.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ4037] Length = 162 Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 46/163 (28%), Positives = 77/163 (47%), Gaps = 13/163 (7%) Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 D +EKIA+ +D N+Y + + A + DY + V+ A Y DP+Q+ Sbjct: 4 DHKEKIAILVDVQNVYYTCREAYRSNFDYNQFWYVATQEKEVVSAKAYAIASNDPKQR-- 61 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 H +L + GF+V+ K + + K DV + +DA E + ++ +++ SG Sbjct: 62 QFHHILRGV---GFEVMLKPYIQRRDGSA----KGDWDVGITLDAIEIAPDVDRVILVSG 114 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 DG F+ LV +Q++ K TV P + S L AD F+ Sbjct: 115 DGDFSLLVERIQQRYNKKV---TVYGAPRLTSQTLIDCADNFV 154 >gi|153836889|ref|ZP_01989556.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ3810] gi|149749847|gb|EDM60592.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ3810] Length = 162 Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 47/164 (28%), Positives = 79/164 (48%), Gaps = 15/164 (9%) Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 D +EKIA+ +D N+Y + + A + DY + V+ A Y DP+Q+ Sbjct: 4 DHKEKIAILVDVQNVYYTCREAYRSNFDYNQFWYVATQEKEVVSAKAYAIASNDPKQR-- 61 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 H +L + GF+V+ K + + K DV + +DA E + ++ +++ SG Sbjct: 62 QFHHILRGV---GFEVMLKPYIQRRDGSA----KGDWDVGITLDAIEITPDVDRVILVSG 114 Query: 122 DGCFTTLVAALQRKV-KKVTIVSTVLSDPSMASDQLRRQADYFM 164 DG F+ LV +Q++ KKVT+ P + S L AD F+ Sbjct: 115 DGDFSLLVERIQQRYNKKVTVYGV----PRLTSQTLIDCADNFV 154 >gi|114319473|ref|YP_741156.1| hypothetical protein Mlg_0311 [Alkalilimnicola ehrlichii MLHE-1] gi|114225867|gb|ABI55666.1| protein of unknown function DUF88 [Alkalilimnicola ehrlichii MLHE-1] Length = 274 Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 44/162 (27%), Positives = 83/162 (51%), Gaps = 13/162 (8%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLK-AFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 + +++D AN+ + GF + Y L + A R+ A IR Y T ++ H Sbjct: 8 VGIYVDAANIQMNG---GFGMQYDVLREFACRTGAEPIRLNAYVTYDEQRAERDRGYHQR 64 Query: 67 LDWLHYN----GFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122 ++ + G++V+ K + + + G K++ D+++AVDA QS+ L +++ +GD Sbjct: 65 VNNFFQSIREFGYKVIIKKYRWYRDEEGNAYAKANADLDMAVDALLQSQSLTRVMMVTGD 124 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 G F +V ALQ + +V +++ S +LRR+AD F+ Sbjct: 125 GDFVQVVRALQNQGCRVELLAF-----DNISSELRREADVFV 161 >gi|237755695|ref|ZP_04584304.1| RtsE [Sulfurihydrogenibium yellowstonense SS-5] gi|237692145|gb|EEP61144.1| RtsE [Sulfurihydrogenibium yellowstonense SS-5] Length = 174 Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 47/173 (27%), Positives = 83/173 (47%), Gaps = 14/173 (8%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 +++A+F+D NLY S++ +++ +L I++RA+ Y + +Q+ Sbjct: 9 QRVAIFVDIQNLYYSARDTFNRKVNFESILYKTLGDRILVRAFAYIVKLQGVDQK----- 63 Query: 65 PLLDWLHYNGFQVVAKVAKEFT----ENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 ++ L + G+QV K K F E +K+ D+ +A+DA SE ++ ++ + Sbjct: 64 GFINTLKHIGYQVREKEPKIFKRLDEEGNLWTTIKADWDMGIAIDAIALSEKIDVAILTT 123 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 GDG F LV LQ K KV I + + +L AD F+DL +I Sbjct: 124 GDGDFKDLVKYLQTKGVKVEIAAF----KQTTAKELIEVADEFIDLTTFGEDI 172 >gi|110667467|ref|YP_657278.1| hypothetical protein HQ1506A [Haloquadratum walsbyi DSM 16790] gi|109625214|emb|CAJ51634.1| conserved hypothetical protein [Haloquadratum walsbyi DSM 16790] Length = 165 Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 49/165 (29%), Positives = 84/165 (50%), Gaps = 14/165 (8%) Query: 4 PREKIALFIDGANLYASSKAL-GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 P +++A+ D NLY ++++L IDY LLK S + RA Y PE++ + Sbjct: 6 PGQRVAVLADAQNLYHTAQSLYSQKIDYGSLLKKGVSGRELTRAIAYVIQADAPEEE-TF 64 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122 L+D GF+ K K F G K+ DV +++DA + ++ +V+ +GD Sbjct: 65 FEALVDI----GFEPKIKQIKTF----GDGTKKADWDVGMSLDAVTLANHVDTVVLCTGD 116 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 G F+ L + L+ + +V ++S S +D+L AD F+DL+ Sbjct: 117 GDFSRLCSHLRHEGVRVEVMSFRES----TADELVDAADTFIDLS 157 >gi|28900837|ref|NP_800492.1| hypothetical protein VPA0982 [Vibrio parahaemolyticus RIMD 2210633] gi|260362550|ref|ZP_05775470.1| conserved hypothetical protein [Vibrio parahaemolyticus K5030] gi|260879204|ref|ZP_05891559.1| conserved hypothetical protein [Vibrio parahaemolyticus AN-5034] gi|260896739|ref|ZP_05905235.1| conserved hypothetical protein [Vibrio parahaemolyticus Peru-466] gi|13506637|gb|AAK08637.1| hypothetical protein [Vibrio parahaemolyticus] gi|28809283|dbj|BAC62325.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD 2210633] gi|308087322|gb|EFO37017.1| conserved hypothetical protein [Vibrio parahaemolyticus Peru-466] gi|308094054|gb|EFO43749.1| conserved hypothetical protein [Vibrio parahaemolyticus AN-5034] gi|308115257|gb|EFO52797.1| conserved hypothetical protein [Vibrio parahaemolyticus K5030] gi|328470741|gb|EGF41652.1| hypothetical protein VP10329_08072 [Vibrio parahaemolyticus 10329] Length = 162 Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 47/164 (28%), Positives = 79/164 (48%), Gaps = 15/164 (9%) Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 D +EKIA+ +D N+Y + + A + DY + V+ A Y DP+Q+ Sbjct: 4 DHKEKIAILVDVQNVYYTCREAYRSNFDYNQFWYVATQEKEVVSAKAYAIASNDPKQR-- 61 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 H +L + GF+V+ K + + K DV + +DA E + ++ +++ SG Sbjct: 62 QFHHILRGV---GFEVMLKPYIQRRDGSA----KGDWDVGITLDAIEIAPDVDRVILVSG 114 Query: 122 DGCFTTLVAALQRKV-KKVTIVSTVLSDPSMASDQLRRQADYFM 164 DG F+ LV +Q++ KKVT+ P + S L AD F+ Sbjct: 115 DGDFSLLVERIQQRYNKKVTVYGV----PRLTSQTLIDCADNFV 154 >gi|149190237|ref|ZP_01868512.1| hypothetical protein VSAK1_15107 [Vibrio shilonii AK1] gi|148835984|gb|EDL52946.1| hypothetical protein VSAK1_15107 [Vibrio shilonii AK1] Length = 174 Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 47/164 (28%), Positives = 82/164 (50%), Gaps = 17/164 (10%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRS--RAIVIRAYYYTTVVGDPEQQFSP 62 E IA+F+D N+Y +++ A G DY L R + RAY ++ DP+Q+ Sbjct: 17 ESIAIFVDVQNVYYTTRQAFGRRFDYNALWAKLSQSYRIDIARAYAISST--DPKQR--Q 72 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122 H +L + +N Q+ K F + K DV LA+D +E + ++ +V+ SGD Sbjct: 73 FHHILRGIGFN-VQL-----KPFIQRLD-GSAKGDWDVGLALDVYETANSVDRIVLISGD 125 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 G F LV +Q++ V+ V S+ ++ L + AD ++++ Sbjct: 126 GDFQVLVERIQQRFNTKVTVAGV---RSLTANNLIQAADDYIEI 166 >gi|327482342|gb|AEA85652.1| conserved hypothetical protein [Pseudomonas stutzeri DSM 4166] Length = 158 Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 46/163 (28%), Positives = 74/163 (45%), Gaps = 16/163 (9%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP-EQQFSPL 63 +KIALF D NLY + + A G DY L R ++ AY Y GDP +QQF + Sbjct: 2 KKIALFADVQNLYYTVRQAHGCHFDYSALWADVSRRGSIVEAYAYAIERGDPRQQQFQQI 61 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + ++ K DV + +D + + ++ +V+ SGDG Sbjct: 62 ------LRKLGFTVKLKPYIQRSDGS----AKGDWDVGITIDVLDAAARVDEVVLASGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 F L+ +V+ + +T P + + L R A ++ + Sbjct: 112 DFDLLL----ERVRAAGVEATAYGVPGLTAQSLIRAATRYVPI 150 >gi|163782630|ref|ZP_02177627.1| hypothetical protein HG1285_17140 [Hydrogenivirga sp. 128-5-R1-1] gi|159882203|gb|EDP75710.1| hypothetical protein HG1285_17140 [Hydrogenivirga sp. 128-5-R1-1] Length = 198 Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 55/178 (30%), Positives = 83/178 (46%), Gaps = 31/178 (17%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTV-------VGDPE- 57 E++ +FIDG+NL+ + L IDY +L+ R ++RAY+YT V G PE Sbjct: 4 ERLMIFIDGSNLFHGIRYLNIKIDYGRLVDFLRESRRLVRAYFYTAVPQDRDVKKGTPEW 63 Query: 58 QQFSPLHPLLDWLHYNGFQV-VAKVAK----EFTENCGRKRVKSSMDVELAVD----AFE 108 + LD L +G +V +AK+ K EF E +D+ LA D AF+ Sbjct: 64 ESLIRQKRFLDELALSGIKVKLAKLRKLPSGEFIE--------KEVDIMLATDMLSLAFQ 115 Query: 109 QSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 + + V+ SGD F V +QR K+V + +S LR+ D F+ L Sbjct: 116 NA--YDTAVLVSGDSDFIYTVEEIQRIGKRVENATF----KKTSSYNLRKTCDRFVLL 167 >gi|149911940|ref|ZP_01900538.1| hypothetical protein PE36_11027 [Moritella sp. PE36] gi|149804987|gb|EDM65016.1| hypothetical protein PE36_11027 [Moritella sp. PE36] Length = 157 Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 42/159 (26%), Positives = 78/159 (49%), Gaps = 13/159 (8%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 +KIA+F+D N+Y +++ G +YRKL + + V+ AY Y GD +Q+ Sbjct: 2 QKIAVFVDVQNIYYTTRQTYGRQFNYRKLWQHLLLQGDVVTAYAYAIDKGDDQQR----- 56 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 D L + GF V K + ++ K DV + +D + +E ++ +V+ SGDG Sbjct: 57 KFQDALKHIGFDVKLKPFIQRSDGSA----KGDWDVGITIDVLQVAESVDTVVLLSGDGD 112 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163 F L+ ++ + + + + V P++ ++ L A F Sbjct: 113 FAILLDTIKARHQ---VRAEVYGVPALTANALINSATVF 148 >gi|157835942|pdb|2QIP|A Chain A, Crystal Structure Of A Protein Of Unknown Function Vpa0982 From Vibrio Parahaemolyticus Rimd 2210633 Length = 165 Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 47/164 (28%), Positives = 78/164 (47%), Gaps = 15/164 (9%) Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 D +EKIA+ +D N+Y + + A + DY + V+ A Y DP+Q+ Sbjct: 7 DHKEKIAILVDVQNVYYTCREAYRSNFDYNQFWYVATQEKEVVSAKAYAIASNDPKQR-- 64 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 H +L + GF+V K + + K DV + +DA E + ++ +++ SG Sbjct: 65 QFHHILRGV---GFEVXLKPYIQRRDGSA----KGDWDVGITLDAIEIAPDVDRVILVSG 117 Query: 122 DGCFTTLVAALQRKV-KKVTIVSTVLSDPSMASDQLRRQADYFM 164 DG F+ LV +Q++ KKVT+ P + S L AD F+ Sbjct: 118 DGDFSLLVERIQQRYNKKVTVYGV----PRLTSQTLIDCADNFV 157 >gi|325283309|ref|YP_004255850.1| hypothetical protein Deipr_1081 [Deinococcus proteolyticus MRP] gi|324315118|gb|ADY26233.1| Domain of unknown function DUF88 [Deinococcus proteolyticus MRP] Length = 186 Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 39/142 (27%), Positives = 70/142 (49%), Gaps = 6/142 (4%) Query: 4 PREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 P+ ++ +FID NLY S++ L +++ LL A ++ A YT + S Sbjct: 6 PKPRVGIFIDTQNLYHSARDLLERTVNFETLLHAGADGRELVHAIAYTV----ERENEST 61 Query: 63 LHPLLDWLHYNGFQVV-AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 P + L G++V + FT + GR + + D+ + D + L+ +V+ SG Sbjct: 62 ARPFIYKLSTLGYKVRRMNLTLHFTSDSGRPIYEGNWDMGMVADMVRLMDHLDIVVLGSG 121 Query: 122 DGCFTTLVAALQRKVKKVTIVS 143 DG FT +V LQ + K+V +++ Sbjct: 122 DGDFTDIVEVLQERGKRVEVLA 143 >gi|49081554|gb|AAT50177.1| PA3951 [synthetic construct] Length = 168 Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 44/163 (26%), Positives = 76/163 (46%), Gaps = 15/163 (9%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP-EQQFSPL 63 +KIA+F D NLY + + A G ++Y L ++ AY Y GDP +QQF + Sbjct: 10 KKIAVFADVQNLYYTVRQAYGCHLNYAALWADIARGGSIVEAYAYAIDRGDPRQQQFQQI 69 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + + K DV + +D + + ++ +V+ SGDG Sbjct: 70 ------LRNLGFTVKLKPYIQRADGS----AKGDWDVGITIDVLDAAPRVDEVVLLSGDG 119 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 F L L++ ++ +V+T P + ++ L R A ++ + Sbjct: 120 DFDLL---LEKVIRAHGVVATAYGVPGLTANALIRAASRYVPI 159 >gi|15599146|ref|NP_252640.1| hypothetical protein PA3951 [Pseudomonas aeruginosa PAO1] gi|107103468|ref|ZP_01367386.1| hypothetical protein PaerPA_01004538 [Pseudomonas aeruginosa PACS2] gi|116051991|ref|YP_789166.1| hypothetical protein PA14_12750 [Pseudomonas aeruginosa UCBPP-PA14] gi|218889766|ref|YP_002438630.1| hypothetical protein PLES_10241 [Pseudomonas aeruginosa LESB58] gi|254242637|ref|ZP_04935959.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] gi|296387523|ref|ZP_06876998.1| hypothetical protein PaerPAb_05192 [Pseudomonas aeruginosa PAb1] gi|313109387|ref|ZP_07795349.1| hypothetical protein PA39016_001770011 [Pseudomonas aeruginosa 39016] gi|9950139|gb|AAG07338.1|AE004813_5 conserved hypothetical protein [Pseudomonas aeruginosa PAO1] gi|115587212|gb|ABJ13227.1| conserved hypothetical protein [Pseudomonas aeruginosa UCBPP-PA14] gi|126196015|gb|EAZ60078.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] gi|218769989|emb|CAW25751.1| conserved hypothetical protein [Pseudomonas aeruginosa LESB58] gi|310881851|gb|EFQ40445.1| hypothetical protein PA39016_001770011 [Pseudomonas aeruginosa 39016] Length = 167 Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 44/163 (26%), Positives = 76/163 (46%), Gaps = 15/163 (9%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP-EQQFSPL 63 +KIA+F D NLY + + A G ++Y L ++ AY Y GDP +QQF + Sbjct: 10 KKIAVFADVQNLYYTVRQAYGCHLNYAALWADIARGGSIVEAYAYAIDRGDPRQQQFQQI 69 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + + K DV + +D + + ++ +V+ SGDG Sbjct: 70 ------LRNLGFTVKLKPYIQRADGS----AKGDWDVGITIDVLDAAPRVDEVVLLSGDG 119 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 F L L++ ++ +V+T P + ++ L R A ++ + Sbjct: 120 DFDLL---LEKVIRAHGVVATAYGVPGLTANALIRAASRYVPI 159 >gi|120598045|ref|YP_962619.1| hypothetical protein Sputw3181_1222 [Shewanella sp. W3-18-1] gi|120558138|gb|ABM24065.1| protein of unknown function DUF88 [Shewanella sp. W3-18-1] Length = 157 Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 45/159 (28%), Positives = 74/159 (46%), Gaps = 13/159 (8%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 +KIALF+D N+Y + + A G +YRKL + ++ A Y GD Q Sbjct: 2 KKIALFVDVQNIYYTCREAYGRQFNYRKLWQHLGYEGDIVLAVAYAIHKGDDGQL----- 56 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 D L + GF+V K + ++ K DV + +D E + ++ +++ SGDG Sbjct: 57 KFQDALKHIGFEVKLKPFIQRSDGS----AKGDWDVGITIDIMEAASEVDTVILLSGDGD 112 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163 F L LQ+ +K + + V P++ + LR A F Sbjct: 113 FDLL---LQKIYQKYGVETQVYGVPTLTAKSLRDAASQF 148 >gi|15605762|ref|NP_213139.1| hypothetical protein aq_200 [Aquifex aeolicus VF5] gi|2982933|gb|AAC06550.1| hypothetical protein aq_200 [Aquifex aeolicus VF5] Length = 208 Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 48/174 (27%), Positives = 79/174 (45%), Gaps = 23/174 (13%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTV-------VGDPE- 57 E++ +FIDG+NL+ + L +DY KL++ R ++RAY+YT V G PE Sbjct: 3 ERLMIFIDGSNLFHGIRYLNIKVDYSKLVEFLREGRYLVRAYFYTAVPQEKDIKKGTPEW 62 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEH 115 LD L + G +V ++ + ++ +D+ LA D + + Sbjct: 63 DSLQRQKRFLDELSFMGIKVKTAHLRKLPSG---EYLEKEVDIMLATDMLSLAYRNAYDT 119 Query: 116 LVIFSGDGCFTTLVAALQ---RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 V+ SGD F V A+Q ++V+ T T +S LR+ D F+ L Sbjct: 120 AVLVSGDSDFIHTVEAVQSLGKRVENATFKKT-------SSYNLRKVCDRFILL 166 >gi|269967719|ref|ZP_06181767.1| hypothetical protein VMC_31970 [Vibrio alginolyticus 40B] gi|269827625|gb|EEZ81911.1| hypothetical protein VMC_31970 [Vibrio alginolyticus 40B] Length = 162 Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 45/163 (27%), Positives = 77/163 (47%), Gaps = 13/163 (7%) Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 + ++KIA+ +D N+Y + + A + DY + V+ A Y DP+Q+ Sbjct: 4 ESKQKIAILVDVQNVYYTCREAYRSNFDYNQFWYVATQGKEVVSARAYAIASNDPKQR-- 61 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 H +L + GF+V+ K + + K DV + +DA E + +E +++ SG Sbjct: 62 QFHHILRGV---GFEVMLKPYIQRRDGSS----KGDWDVGITLDAIEIAPEVEEVILVSG 114 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 DG F+ LV +Q++ K TV P + S L AD F+ Sbjct: 115 DGDFSLLVERIQQRFNKTV---TVYGVPKLTSQTLIDCADNFV 154 >gi|225848799|ref|YP_002728963.1| RtsE [Sulfurihydrogenibium azorense Az-Fu1] gi|225644319|gb|ACN99369.1| RtsE [Sulfurihydrogenibium azorense Az-Fu1] Length = 174 Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 45/166 (27%), Positives = 82/166 (49%), Gaps = 14/166 (8%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 +++A+F+D NLY S++ +++ +L+ I++RA+ Y + +Q+ Sbjct: 9 QRVAVFVDIQNLYYSARDTFNRKVNFESILQKTVGDRILVRAFAYIVKLHGVDQK----- 63 Query: 65 PLLDWLHYNGFQVVAKVAKEFT----ENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 ++ L + G+QV K K F E +K+ D+ +A+DA ++ ++ V+ + Sbjct: 64 GFINTLKHIGYQVREKEPKIFKRLDEEGNLWTTIKADWDMGIAIDAISLADKIDVAVLTT 123 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 GDG F LV LQ K KV I + + +L AD F+DL Sbjct: 124 GDGDFKDLVKYLQTKGVKVEIAAF----KQTTAKELIEAADEFIDL 165 >gi|262395374|ref|YP_003287227.1| hypothetical protein VEA_000074 [Vibrio sp. Ex25] gi|262338968|gb|ACY52762.1| hypothetical protein VEA_000074 [Vibrio sp. Ex25] Length = 162 Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 45/161 (27%), Positives = 76/161 (47%), Gaps = 13/161 (8%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 ++KIA+ +D N+Y + + A + DY + V+ A Y DP+Q+ Sbjct: 6 KQKIAILVDVQNVYYTCREAYRSNFDYNQFWYVATQGKEVVSARAYAIASNDPKQR--QF 63 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 H +L + GF+V+ K + + K DV + +DA E + +E +++ SGDG Sbjct: 64 HHILRGV---GFEVMLKPYIQRRDGSS----KGDWDVGITLDAIEIAPEVEEVILVSGDG 116 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F+ LV +Q++ K TV P + S L AD F+ Sbjct: 117 DFSLLVERIQQRFNKTV---TVYGVPKLTSQTLIDCADNFV 154 >gi|255020942|ref|ZP_05292998.1| hypothetical protein ACA_1164 [Acidithiobacillus caldus ATCC 51756] gi|254969733|gb|EET27239.1| hypothetical protein ACA_1164 [Acidithiobacillus caldus ATCC 51756] Length = 336 Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 39/147 (26%), Positives = 74/147 (50%), Gaps = 13/147 (8%) Query: 5 REKIALFIDGANL-YASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 R+ I +++D N+ Y A+ +D+ L+ F R R T + E++ Sbjct: 6 RQGIGVYVDAENIRYNGGYAMRYDV-----LRRFAGRGDDARLLRLNTYMAIDEERLRRD 60 Query: 64 HPLLDWLH-YN------GFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHL 116 D + Y G++++ K + FT+ G + K++ D++LAVD QSE L+ + Sbjct: 61 PDYRDGIRGYQQAVRDLGWKIIEKPVRWFTDEEGNRLSKANADLDLAVDVMLQSERLDQV 120 Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVS 143 ++ +GDG F +V ALQ + +V +++ Sbjct: 121 LLVTGDGDFLQVVRALQNRGCRVEVLA 147 >gi|27366806|ref|NP_762333.1| hypothetical protein VV2_0365 [Vibrio vulnificus CMCP6] gi|320158689|ref|YP_004191067.1| hypothetical protein VVM_01748 [Vibrio vulnificus MO6-24/O] gi|27358373|gb|AAO07323.1| hypothetical protein VV2_0365 [Vibrio vulnificus CMCP6] gi|319934001|gb|ADV88864.1| hypothetical protein VVMO6_03842 [Vibrio vulnificus MO6-24/O] Length = 162 Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 15/162 (9%) Query: 7 KIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 K+A+F+D N+Y + K DY + ++ V+ A+ Y DP Q+ H Sbjct: 7 KVAIFVDVQNIYYTCKEKYRKHFDYNRFWQSATQGKQVVVAHAYAISSKDPGQR--QFHH 64 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125 +L + GF V K + + K DV LA+DAFE + ++ +++ SGDG F Sbjct: 65 ILRGI---GFDVKLKPFIQRWDGSA----KGDWDVGLALDAFEHAPMVDEVILLSGDGDF 117 Query: 126 TTLVAALQRKV-KKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 LV +Q+K KKVT+ P + + L+ D ++ + Sbjct: 118 EILVERIQQKFGKKVTVYGV----PGLTAQNLQAVVDKYIPI 155 >gi|37676581|ref|NP_936977.1| hypothetical protein VVA0921 [Vibrio vulnificus YJ016] gi|37201124|dbj|BAC96947.1| uncharacterized conserved protein [Vibrio vulnificus YJ016] Length = 162 Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 15/162 (9%) Query: 7 KIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 K+A+F+D N+Y + K DY + ++ V+ A+ Y DP Q+ H Sbjct: 7 KVAIFVDVQNIYYTCKEKYRKHFDYNRFWQSATQDKQVVVAHAYAISSKDPGQR--QFHH 64 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125 +L + GF V K + + K DV LA+DAFE + ++ +++ SGDG F Sbjct: 65 ILRGI---GFDVKLKPFIQRWDGSA----KGDWDVGLALDAFEHAPMVDEVILLSGDGDF 117 Query: 126 TTLVAALQRKV-KKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 LV +Q+K KKVT+ P + + L+ D ++ + Sbjct: 118 EILVERIQQKFGKKVTVYGV----PGLTAQNLQAVVDKYIPI 155 >gi|146293884|ref|YP_001184308.1| hypothetical protein Sputcn32_2790 [Shewanella putrefaciens CN-32] gi|145565574|gb|ABP76509.1| protein of unknown function DUF88 [Shewanella putrefaciens CN-32] Length = 157 Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 45/159 (28%), Positives = 74/159 (46%), Gaps = 13/159 (8%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 +KIALF+D N+Y + + A G +YRKL + ++ A Y GD Q Sbjct: 2 KKIALFVDVQNIYYTCREAYGRQFNYRKLWQHLGYEGDIVLAVAYAIHKGDDGQL----- 56 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 D L + GF+V K + ++ K DV + +D E + ++ +++ SGDG Sbjct: 57 KFQDALKHIGFEVKLKPFIQRSDGS----AKGDWDVGITIDIMEAASEVDTVILLSGDGD 112 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163 F L LQ+ +K + + V P++ + LR A F Sbjct: 113 FDLL---LQKIHQKYGVETQVYGVPTLTAKSLRDAASQF 148 >gi|319427256|gb|ADV55330.1| conserved hypothetical protein [Shewanella putrefaciens 200] Length = 157 Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 45/159 (28%), Positives = 74/159 (46%), Gaps = 13/159 (8%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 +KIALF+D N+Y + + A G +YRKL + ++ A Y GD Q Sbjct: 2 KKIALFVDVQNIYYTCREAYGRQFNYRKLWQHLGYEGDIVLAVAYAIHKGDDGQL----- 56 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 D L + GF+V K + ++ K DV + +D E + ++ +++ SGDG Sbjct: 57 KFQDALKHIGFEVKLKPFIQRSDGSA----KGDWDVGITIDIMEAASEVDTVILLSGDGD 112 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163 F L LQ+ +K + + V P++ + LR A F Sbjct: 113 FDLL---LQKIHQKYWVETQVYGVPTLTAKSLRDAASQF 148 >gi|89092681|ref|ZP_01165634.1| hypothetical protein MED92_15283 [Oceanospirillum sp. MED92] gi|89083193|gb|EAR62412.1| hypothetical protein MED92_15283 [Oceanospirillum sp. MED92] Length = 160 Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 43/161 (26%), Positives = 76/161 (47%), Gaps = 13/161 (8%) Query: 7 KIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 KIA+F+D N+Y +++ A G +YRK +A ++ ++ A Y D Q+ Sbjct: 3 KIAIFVDVQNIYYTTRQAFGGSFNYRKFWQAISTQGEIVEANAYAIERADDGQK-----K 57 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125 D L + GF V K + + K DV + +D EQ+ ++ +++ SGDG F Sbjct: 58 FQDALRHIGFNVKLKPFIQRKDGTA----KGDWDVGITIDVLEQAAHVDKVILLSGDGDF 113 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 L+ + R KVT + V S ++ + L D++ + Sbjct: 114 DLLLKKI-RSTYKVT--TEVYSIEALTAKSLISATDHYHSI 151 >gi|262274163|ref|ZP_06051975.1| hypothetical protein VHA_001139 [Grimontia hollisae CIP 101886] gi|262221973|gb|EEY73286.1| hypothetical protein VHA_001139 [Grimontia hollisae CIP 101886] Length = 161 Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 46/162 (28%), Positives = 79/162 (48%), Gaps = 13/162 (8%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 +KIA+F D N+Y +++ A G +YRKL + + V+ A Y + D +QQ Sbjct: 6 KKIAVFADVQNVYYTTRQAYGRQFNYRKLWQRLQEMGDVVCANAYA-IRRDDDQQIK--- 61 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 D L + GF+V K + ++ K DV +A+D E + ++ +V+ SGDG Sbjct: 62 -FQDALRHIGFEVKLKPYIQRSDGS----TKGDWDVGIAIDVMEMAPEVDTVVLLSGDGD 116 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 F L+ ++ + K IV V P + ++ L D F+ + Sbjct: 117 FDLLMNKVRERYGKEAIVFGV---PMLTANSLINSVDRFIGI 155 >gi|269962746|ref|ZP_06177088.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269832501|gb|EEZ86618.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 163 Score = 53.9 bits (128), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 45/162 (27%), Positives = 79/162 (48%), Gaps = 15/162 (9%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 ++KIA+ +D N+Y + + A + DY + V+ A Y DP+Q+ Sbjct: 7 KQKIAILVDVQNVYYTCREAYRSNFDYNQFWYVATQGKEVVSARAYAIASNDPKQR--QF 64 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 H +L + GF+V+ K + + K DV + +DA E + ++ +++ SGDG Sbjct: 65 HHILRGV---GFEVMLKPYIQRRDGSA----KGDWDVGITLDAIEIAPEVDEVILVSGDG 117 Query: 124 CFTTLVAALQRKV-KKVTIVSTVLSDPSMASDQLRRQADYFM 164 F+ LV +Q++ KKVT+ P + S L AD+F+ Sbjct: 118 DFSLLVERIQQRFNKKVTVYGV----PRLTSQTLIDCADHFV 155 >gi|292655260|ref|YP_003535157.1| hypothetical protein HVO_1102 [Haloferax volcanii DS2] gi|291371756|gb|ADE03983.1| Uncharacterized conserved protein [Haloferax volcanii DS2] Length = 165 Score = 53.9 bits (128), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 47/169 (27%), Positives = 83/169 (49%), Gaps = 14/169 (8%) Query: 4 PREKIALFIDGANLYASSKAL-GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 P +++A+ D NLY ++++L +IDY LL+ + + RA Y + D + S Sbjct: 6 PDQRVAILADAQNLYHTAQSLYSRNIDYSSLLQKGTAGRALTRAIAYV-IRADSPDEVSF 64 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122 L+D GF+ K K F G K+ D+ +A+DA ++ ++ +V+ SGD Sbjct: 65 FDALVDI----GFETKIKDIKTF----GDGSKKADWDLGIALDAVSLADHVDTVVLCSGD 116 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 G F L L+ + +V V++ +++L AD F+DL+ K Sbjct: 117 GDFERLCTHLRHEGVRV----EVMAFKESTAEELVAAADTFIDLSERKE 161 >gi|152985348|ref|YP_001346543.1| hypothetical protein PSPA7_1157 [Pseudomonas aeruginosa PA7] gi|150960506|gb|ABR82531.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7] Length = 167 Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 43/163 (26%), Positives = 76/163 (46%), Gaps = 15/163 (9%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP-EQQFSPL 63 +KIA+F D NLY + + A G ++Y L R ++ AY Y GDP +QQF + Sbjct: 10 KKIAVFADVQNLYYTVRQAYGCHLNYAALWADIARRGRIVEAYAYAIDRGDPRQQQFQRI 69 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + + K DV + +D + + ++ +V+ SGDG Sbjct: 70 ------LRNLGFTVKLKPYIQRADGS----AKGDWDVGITIDVLDAAPRVDEVVLLSGDG 119 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 F L L++ ++ + ++ P + ++ L R A ++ + Sbjct: 120 DFDLL---LEKVIRAHGVEASAYGVPGLTANALIRAASRYVPI 159 >gi|15605927|ref|NP_213304.1| hypothetical protein aq_430 [Aquifex aeolicus VF5] gi|2983099|gb|AAC06705.1| hypothetical protein aq_430 [Aquifex aeolicus VF5] Length = 183 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 13/159 (8%) Query: 9 ALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 A+F+DG NLY K L ID K + F+ + ++Y + E+Q Sbjct: 27 AIFVDGTNLYFIQKNFLNAKIDIVKFVNYFKQFYDIYNTFFYLAYKEEDEKQ----ERFF 82 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTT 127 L ++G VV K K+ + +K +DV++A+D + + ++ SGD F Sbjct: 83 KLLAFSGITVVKKPVKQLKDG----SLKGDVDVDIAIDMLLTKDNYDTAILCSGDSDFER 138 Query: 128 LVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 LV L+ K+V VST +S +L D ++DL Sbjct: 139 LVYVLRNFGKEVICVST----KESSSIELVNACDRYIDL 173 >gi|254432040|ref|ZP_05045743.1| DUF88 [Cyanobium sp. PCC 7001] gi|197626493|gb|EDY39052.1| DUF88 [Cyanobium sp. PCC 7001] Length = 219 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 47/198 (23%), Positives = 87/198 (43%), Gaps = 37/198 (18%) Query: 2 FDPREK-IALFIDGANLYASSKALGFDIDYRKLLKAFRSR-AIVIRAYYYTTVVGDPEQQ 59 F PR + + + +DG +++ + + LG+ D R+LL+ S+ + + ++ + DP Q Sbjct: 13 FQPRPRQLVVAVDGHSMFYAQQKLGWFFDPRRLLRHASSQPGLELAGAFWYAGLKDPSDQ 72 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCG---------------------------RK 92 P D L GF V + +E R Sbjct: 73 ----RPFRDALTSLGFTVRTRPLRELAPPASNGSTQAADGEHRHPEPPRPTDQRPADQRH 128 Query: 93 RVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMA 152 V++++DVE+AVD + + + + SG LV L+ + ++T+++T M Sbjct: 129 FVRANLDVEVAVDLMMVAPRTDEVWLLSGSRDLDRLVEVLRAQGVRITLMTTE----GMV 184 Query: 153 SDQLRRQADYFMDLAYLK 170 + +LR AD F+DLA L+ Sbjct: 185 ARELRNAADGFVDLASLR 202 >gi|163803423|ref|ZP_02197297.1| hypothetical protein 1103602000421_AND4_08566 [Vibrio sp. AND4] gi|159172772|gb|EDP57618.1| hypothetical protein AND4_08566 [Vibrio sp. AND4] Length = 162 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 45/164 (27%), Positives = 79/164 (48%), Gaps = 15/164 (9%) Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 + ++KIA+ +D N+Y + + A + DY + + V A Y DP+Q+ Sbjct: 4 ESKQKIAILVDVQNVYYTCREAYRSNFDYNQFWYVATNGKEVASARAYAIASNDPKQR-- 61 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 H +L + GF+V+ K + + K DV + +DA E + ++ +++ SG Sbjct: 62 QFHHILRGV---GFEVMLKPYIQRRDGSA----KGDWDVGITLDAIEAAAEVDEIILVSG 114 Query: 122 DGCFTTLVAALQRKV-KKVTIVSTVLSDPSMASDQLRRQADYFM 164 DG F+ LV +Q++ KKVT+ P + S L AD F+ Sbjct: 115 DGDFSMLVERIQQRFNKKVTVYGV----PKLTSQNLIDCADNFV 154 >gi|298246249|ref|ZP_06970055.1| protein of unknown function DUF88 [Ktedonobacter racemifer DSM 44963] gi|297553730|gb|EFH87595.1| protein of unknown function DUF88 [Ktedonobacter racemifer DSM 44963] Length = 933 Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 48/173 (27%), Positives = 86/173 (49%), Gaps = 18/173 (10%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYY--TTVVGDPEQQ 59 F E++ +F+D ANL S++ L +D+ KLL R ++RA Y T+ EQ Sbjct: 771 FPSTERVGVFVDVANLLYSARTLRMSVDFGKLLDFLRGNRRLVRAQAYCPTSPQAGDEQM 830 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLV 117 F L + G+++ K K F+ G K K+ +D++L +D EG ++ +V Sbjct: 831 F------LQAVKGLGYRITTKNYKTFSS--GAK--KADLDLDLCMDVVRLVEGRAVDCIV 880 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170 + SGD F ++ +V + + D +M++ LR+ D F++L+ L+ Sbjct: 881 LVSGDSDFMPMLDYCSDHGVRVEVAAF---DEAMSA-TLRQSCDLFVNLSLLE 929 >gi|229592764|ref|YP_002874883.1| hypothetical protein PFLU5385 [Pseudomonas fluorescens SBW25] gi|229364630|emb|CAY52542.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25] Length = 158 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 15/161 (9%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP-EQQFSPL 63 +KIA+F D NLY + + A G +Y L SR ++ AY Y GD +QQF + Sbjct: 2 KKIAVFADVQNLYYTVRQAYGCHFNYAALWADISSRGQIVEAYAYAIDRGDSKQQQFQQI 61 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + ++ K DV + +D + ++ ++ +V+ SGDG Sbjct: 62 ------LRNLGFTVKLKPYIQRSDGS----AKGDWDVGITIDIMDAADHVDEIVLASGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F L L R + K + + P + ++ L R A ++ Sbjct: 112 DFDML---LDRIINKHGVEAVAYGVPGLTANSLIRAASRYV 149 >gi|91224643|ref|ZP_01259904.1| hypothetical protein V12G01_07878 [Vibrio alginolyticus 12G01] gi|91190531|gb|EAS76799.1| hypothetical protein V12G01_07878 [Vibrio alginolyticus 12G01] Length = 162 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 44/163 (26%), Positives = 76/163 (46%), Gaps = 13/163 (7%) Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 + ++KIA+ +D N+Y + + A + DY + V+ A Y DP+Q+ Sbjct: 4 ESKQKIAILVDVQNVYYTCREAYRSNFDYNQFWYVATQGKEVVSARAYAIASNDPKQR-- 61 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 H +L + GF+V+ K + + K DV + +DA E + +E +++ SG Sbjct: 62 QFHHILRGV---GFEVMLKPYIQRRDGSS----KGDWDVGITLDAIEIAPEVEEVILVSG 114 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 DG F+ LV +Q++ TV P + S L AD F+ Sbjct: 115 DGDFSLLVERIQQRFNNTV---TVYGVPKLTSQTLIDCADNFV 154 >gi|108805593|ref|YP_645530.1| hypothetical protein Rxyl_2805 [Rubrobacter xylanophilus DSM 9941] gi|108766836|gb|ABG05718.1| protein of unknown function DUF88 [Rubrobacter xylanophilus DSM 9941] Length = 189 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 43/134 (32%), Positives = 72/134 (53%), Gaps = 6/134 (4%) Query: 6 EKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF-SPL 63 E++A+F+DGANLY S K+ G +DY +LL+A + ++RA +Y + ++Q S Sbjct: 7 ERVAVFVDGANLYHSIKSYYGGVLDYGRLLEAAVAGRRLLRATFYLVEKQEADEQVASST 66 Query: 64 HPLLDWLHYNGFQVVAK-VAKEFTENCGRKRV---KSSMDVELAVDAFEQSEGLEHLVIF 119 + L+ G++V +K + T G +RV K DV + VD ++ + V+ Sbjct: 67 RSFVYNLNRFGYKVRSKPLTVHETTTPGVERVVSHKGDWDVGIVVDMIRLADHADTYVLV 126 Query: 120 SGDGCFTTLVAALQ 133 SGDG + +V LQ Sbjct: 127 SGDGDYVEVVDYLQ 140 >gi|153001687|ref|YP_001367368.1| hypothetical protein Shew185_3175 [Shewanella baltica OS185] gi|160876425|ref|YP_001555741.1| hypothetical protein Sbal195_3319 [Shewanella baltica OS195] gi|217972380|ref|YP_002357131.1| hypothetical protein Sbal223_1195 [Shewanella baltica OS223] gi|151366305|gb|ABS09305.1| protein of unknown function DUF88 [Shewanella baltica OS185] gi|160861947|gb|ABX50481.1| protein of unknown function DUF88 [Shewanella baltica OS195] gi|217497515|gb|ACK45708.1| protein of unknown function DUF88 [Shewanella baltica OS223] gi|315268615|gb|ADT95468.1| hypothetical protein Sbal678_3326 [Shewanella baltica OS678] Length = 157 Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 45/159 (28%), Positives = 73/159 (45%), Gaps = 13/159 (8%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 +KIALF+D N+Y + + A G +YRKL + + A Y GD Q Sbjct: 2 KKIALFVDVQNIYYTCREAYGRQFNYRKLWQHLGYEGDIALAVAYAIHKGDDGQL----- 56 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 D L + GF+V K + ++ K DV + +D E + ++ +++ SGDG Sbjct: 57 KFQDALKHIGFEVKLKPFIQRSDGS----AKGDWDVGITIDIMEAASEVDTVILLSGDGD 112 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163 F L LQ+ +K + + V P++ + LR A F Sbjct: 113 FDLL---LQKIHQKYGVETQVYGVPTLTAKSLRDAASQF 148 >gi|225850534|ref|YP_002730768.1| RtsE [Persephonella marina EX-H1] gi|225645811|gb|ACO03997.1| RtsE [Persephonella marina EX-H1] Length = 179 Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 47/175 (26%), Positives = 85/175 (48%), Gaps = 14/175 (8%) Query: 4 PREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 +++A+F+D NLY S++ + +++ +L + +++RA Y + +Q+ Sbjct: 12 KNQRVAVFLDIQNLYYSARDSFNRKVNFESVLDKVLNGRVLVRAIAYLVKLQGVDQK--- 68 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFT--ENCGR--KRVKSSMDVELAVDAFEQSEGLEHLVI 118 ++ L + G+QV K K F + G +K+ D+ +A+DA +E ++ V+ Sbjct: 69 --GFINTLKHIGYQVRVKEPKIFKRLDEYGNLWTTIKADWDMGIAMDAISLAEKIDVAVL 126 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 SGDG F LV L K KV I + A+ +L AD F+DL E+ Sbjct: 127 ASGDGDFADLVRYLHTKGVKVEIAAF----KQTAAKELIEVADEFIDLTAFGEEV 177 >gi|126175377|ref|YP_001051526.1| hypothetical protein Sbal_3176 [Shewanella baltica OS155] gi|304410207|ref|ZP_07391826.1| hypothetical protein Sbal183DRAFT_1664 [Shewanella baltica OS183] gi|307302082|ref|ZP_07581840.1| hypothetical protein Sbal175DRAFT_0340 [Shewanella baltica BA175] gi|125998582|gb|ABN62657.1| protein of unknown function DUF88 [Shewanella baltica OS155] gi|304351616|gb|EFM16015.1| hypothetical protein Sbal183DRAFT_1664 [Shewanella baltica OS183] gi|306914120|gb|EFN44541.1| hypothetical protein Sbal175DRAFT_0340 [Shewanella baltica BA175] Length = 157 Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 45/159 (28%), Positives = 73/159 (45%), Gaps = 13/159 (8%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 +KIALF+D N+Y + + A G +YRKL + + A Y GD Q Sbjct: 2 KKIALFVDVQNIYYTCREAYGRQFNYRKLWQHLGYEGDIALAVAYAIHKGDDGQL----- 56 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 D L + GF+V K + ++ K DV + +D E + ++ +++ SGDG Sbjct: 57 KFQDALKHIGFEVKLKPFIQRSDGS----AKGDWDVGITIDIMEAASEVDTVILLSGDGD 112 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163 F L LQ+ +K + + V P++ + LR A F Sbjct: 113 FDLL---LQKIHQKYGVETQVYGVPTLTAKSLRDAASQF 148 >gi|163785396|ref|ZP_02180018.1| hypothetical protein HG1285_09231 [Hydrogenivirga sp. 128-5-R1-1] gi|159879334|gb|EDP73216.1| hypothetical protein HG1285_09231 [Hydrogenivirga sp. 128-5-R1-1] Length = 186 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 46/168 (27%), Positives = 78/168 (46%), Gaps = 15/168 (8%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP-----EQQF 60 EKIA+FID N++ +S I+Y+KL++ R ++RAY+YT V ++Q+ Sbjct: 22 EKIAIFIDAGNMFHASNYYKIKINYKKLVEFLRRDRWLLRAYFYTGVPTQDLDKSLKEQW 81 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVI 118 L+ L G +V K+ E ++ +DV LA D + + ++ Sbjct: 82 KKQKGFLNELQNLGIKVKTMPLKKTPEGF----IEKGVDVLLATDMVSLAFRNAYDTAIL 137 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 SGD + +V +Q K+V S +S +LR+ D F+ L Sbjct: 138 VSGDSDYVPVVEEIQELGKRVENASF----KRTSSFELRKVCDRFILL 181 >gi|262404166|ref|ZP_06080721.1| hypothetical protein VOA_002156 [Vibrio sp. RC586] gi|262349198|gb|EEY98336.1| hypothetical protein VOA_002156 [Vibrio sp. RC586] Length = 157 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 45/165 (27%), Positives = 83/165 (50%), Gaps = 15/165 (9%) Query: 6 EKIALFIDGANLYASSKA-LGFDIDYRKLL-KAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 EKIA+ +D N+Y + + G DY + +A + RA+V +A Y DP+Q+ Sbjct: 2 EKIAILVDVQNVYYTCRERYGRHFDYNQFWSQATQGRAVV-KANAYAIASKDPQQR--QF 58 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 H +L + GF+V+ K + ++ K DV +A+D +E ++ ++ +V+ SGDG Sbjct: 59 HHILRGI---GFEVMLKPFIQRSDGSA----KGDWDVGIALDGYELAQEVDTVVLVSGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F LV +Q++ + + V P + + L A+ F + + Sbjct: 112 DFEPLVTRIQQRFQ---VKVEVYGVPKLTAQNLIDVANQFHPIEH 153 >gi|119946864|ref|YP_944544.1| hypothetical protein Ping_3258 [Psychromonas ingrahamii 37] gi|119865468|gb|ABM04945.1| hypothetical protein DUF88 [Psychromonas ingrahamii 37] Length = 157 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 10/123 (8%) Query: 7 KIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 KIA+F D N+Y +++ A G +YRKL + + ++ AY Y GD +Q+ Sbjct: 3 KIAVFADVQNIYYTTRQAYGKQFNYRKLWQQLEQQGDIVSAYAYAIERGDNQQK-----K 57 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125 D L + GF+V K + ++ K DV + +D E + ++ +++ SGDG F Sbjct: 58 FQDVLTHLGFEVKLKPFIQRSDGTA----KGDWDVGITIDIMETAPQVDTIILLSGDGDF 113 Query: 126 TTL 128 L Sbjct: 114 AIL 116 >gi|313680485|ref|YP_004058224.1| hypothetical protein Ocepr_1598 [Oceanithermus profundus DSM 14977] gi|313153200|gb|ADR37051.1| protein of unknown function DUF88 [Oceanithermus profundus DSM 14977] Length = 189 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 42/173 (24%), Positives = 80/173 (46%), Gaps = 20/173 (11%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVV--GDPEQQFSPL 63 +++ALFIDG+ +Y +K +G+++D+RK+++ F S + A+YY + D QQ Sbjct: 2 DRLALFIDGSFVYNCAKRMGWNVDHRKVIEHFPSGFALFNAFYYAPITDWNDERQQ---- 57 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 LD L + G+ V ++ + S + +A D + + ++ SG Sbjct: 58 -KFLDALIFMGYSVRSREVRG---------EAPSFEAHIATDLLITAPRWDVALLASGAA 107 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 V A++ K+V + L P + +R D F+DL + + R+ Sbjct: 108 QLVPAVEAVRTMGKEVHL----LGIPELVDLDIRSATDRFIDLKEYRELLERE 156 >gi|297567046|ref|YP_003686018.1| hypothetical protein Mesil_2661 [Meiothermus silvanus DSM 9946] gi|296851495|gb|ADH64510.1| protein of unknown function DUF88 [Meiothermus silvanus DSM 9946] Length = 181 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 46/175 (26%), Positives = 87/175 (49%), Gaps = 12/175 (6%) Query: 6 EKIALFIDGANLY---ASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 E++A+FIDG+NLY SS + + +D+ + ++ + ++RAYYY + + Sbjct: 2 ERVAVFIDGSNLYKGLVSSLSSDYRLDFVQFIETLVAGRKLLRAYYYNAPLPVEDPAAKA 61 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFS 120 L++L + V ++ + E G V+ +D+++A+D + + + V+ S Sbjct: 62 HQSFLNYLKRVPY-VAVRLGR--LERRGEGFVEKGVDIQIAIDLLKLAYANAYDVAVLVS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 GDG F +V +Q K+V + +++S +L +QAD F L L E R Sbjct: 119 GDGDFADVVKVIQDMGKQVENSTF----QALSSHRLAQQADRFFPLDELPWERLR 169 >gi|15789664|ref|NP_279488.1| hypothetical protein VNG0419C [Halobacterium sp. NRC-1] gi|169235378|ref|YP_001688578.1| hypothetical protein OE1626F [Halobacterium salinarum R1] gi|10580028|gb|AAG18968.1| conserved hypothetical protein [Halobacterium sp. NRC-1] gi|167726444|emb|CAP13229.1| conserved hypothetical protein [Halobacterium salinarum R1] Length = 165 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 46/166 (27%), Positives = 82/166 (49%), Gaps = 16/166 (9%) Query: 4 PREKIALFIDGANLYASSKAL-GFDIDYRKLL-KAFRSRAIVIRAYYYTTVVGDPEQQFS 61 P +++A+ D NLY S++++ +IDY LL K + R + Y + E +F Sbjct: 6 PAQRVAVLADSQNLYHSAQSVYSQNIDYAALLDKGVQDRELTRAIAYVIRAQSEDEDRF- 64 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 D L GF+ K K F G K+ DV +++DA ++ ++ +V+ +G Sbjct: 65 -----FDALRDIGFETKIKAIKTF----GDGSKKADWDVGMSLDAVSLADHIDTIVLCTG 115 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 DG F+ L L+ + +V +++ S A+ +L AD F+DL+ Sbjct: 116 DGDFSRLCRHLRHEGVRVEVMAFEES----AATELVDAADSFVDLS 157 >gi|153832763|ref|ZP_01985430.1| protein of unknown function [Vibrio harveyi HY01] gi|156976905|ref|YP_001447811.1| hypothetical protein VIBHAR_05689 [Vibrio harveyi ATCC BAA-1116] gi|148870897|gb|EDL69787.1| protein of unknown function [Vibrio harveyi HY01] gi|156528499|gb|ABU73584.1| hypothetical protein VIBHAR_05689 [Vibrio harveyi ATCC BAA-1116] Length = 162 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 45/164 (27%), Positives = 79/164 (48%), Gaps = 15/164 (9%) Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 + ++KIA+ +D N+Y + + A + DY + V+ A Y DP+Q+ Sbjct: 4 ESKQKIAILVDVQNVYYTCREAYRSNFDYNQFWYVATQGKEVVSARAYAIASNDPKQR-- 61 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 H +L + GF+V+ K + + K DV + +DA E + ++ +++ SG Sbjct: 62 QFHHILRGV---GFEVMLKPYIQRRDGSA----KGDWDVGITLDAIEIAPEVDEVILVSG 114 Query: 122 DGCFTTLVAALQRKV-KKVTIVSTVLSDPSMASDQLRRQADYFM 164 DG F+ LV +Q++ KKVT+ P + S L AD F+ Sbjct: 115 DGDFSLLVERIQQRFNKKVTVYGV----PKLTSQTLIDCADNFV 154 >gi|117919529|ref|YP_868721.1| hypothetical protein Shewana3_1080 [Shewanella sp. ANA-3] gi|117611861|gb|ABK47315.1| protein of unknown function DUF88 [Shewanella sp. ANA-3] Length = 170 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 44/162 (27%), Positives = 77/162 (47%), Gaps = 15/162 (9%) Query: 4 PREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ-QFS 61 P +KIALF+D N+Y + + A +YRKL + ++ ++ A Y GD Q +F Sbjct: 13 PLKKIALFVDVQNIYYTCREAYQRQFNYRKLWQQLSAQGEIVSAIAYAIHRGDDGQLKFQ 72 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 D L + GF++ K + ++ K DV + +D E + ++ +++ SG Sbjct: 73 ------DALRHIGFELKLKPFIQRSDGSA----KGDWDVGITIDVLEMAPEVDTVILLSG 122 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163 DG F L+ ++ +K I + V PS+ + L A F Sbjct: 123 DGDFALLLDKIR---QKYAIEAEVYGVPSLTAKSLMDAATRF 161 >gi|146284019|ref|YP_001174172.1| hypothetical protein PST_3707 [Pseudomonas stutzeri A1501] gi|145572224|gb|ABP81330.1| conserved hypothetical protein [Pseudomonas stutzeri A1501] Length = 197 Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 45/161 (27%), Positives = 72/161 (44%), Gaps = 16/161 (9%) Query: 6 EKIALFIDGANLYAS-SKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP-EQQFSPL 63 +KIALF D NLY + +A G +Y L R ++ AY Y GDP +QQF + Sbjct: 41 KKIALFADVQNLYYTVRQAHGCHFNYSALWADVSRRGTIVEAYAYAIERGDPRQQQFQQI 100 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + ++ K DV + +D + + ++ +V+ SGDG Sbjct: 101 ------LRKLGFTVKLKPYIQRSDGS----AKGDWDVGITIDVLDAAARVDEVVLASGDG 150 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F L+ +V+ +T P + + L R A ++ Sbjct: 151 DFDLLL----ERVRAGGAEATAYGVPGLTAQSLIRAATRYV 187 >gi|257051312|ref|YP_003129145.1| protein of unknown function DUF88 [Halorhabdus utahensis DSM 12940] gi|256690075|gb|ACV10412.1| protein of unknown function DUF88 [Halorhabdus utahensis DSM 12940] Length = 165 Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 49/166 (29%), Positives = 83/166 (50%), Gaps = 16/166 (9%) Query: 4 PREKIALFIDGANLYASSKAL-GFDIDYRKLLKA-FRSRAIVIRAYYYTTVVGDPEQQFS 61 P +++A+ D NLY ++++L +IDY +LL A R R + Y D E++F Sbjct: 6 PGQRVAVLADSQNLYHTAQSLYQQNIDYGELLDAAVRDRQLTRAIAYVIRADADDEERF- 64 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 D L GF+ AK K F + G K K+ DV +++DA + ++ + + +G Sbjct: 65 -----FDALEDIGFETKAKDIKTFAD--GSK--KADWDVGMSLDAVTLAPHVDTIALCTG 115 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 DG F LV ++ + +V VLS S++L A+ + DL+ Sbjct: 116 DGDFARLVTHVRHEGVRV----EVLSFGESTSEELLDVAEDYTDLS 157 >gi|153214272|ref|ZP_01949289.1| conserved hypothetical protein [Vibrio cholerae 1587] gi|229515202|ref|ZP_04404662.1| hypothetical protein VCB_002859 [Vibrio cholerae TMA 21] gi|297579334|ref|ZP_06941262.1| conserved hypothetical protein [Vibrio cholerae RC385] gi|124115420|gb|EAY34240.1| conserved hypothetical protein [Vibrio cholerae 1587] gi|229347907|gb|EEO12866.1| hypothetical protein VCB_002859 [Vibrio cholerae TMA 21] gi|297536928|gb|EFH75761.1| conserved hypothetical protein [Vibrio cholerae RC385] Length = 157 Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 42/164 (25%), Positives = 75/164 (45%), Gaps = 13/164 (7%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 EKIA+ +D N+Y + + G DY + V++A Y DP+Q+ H Sbjct: 2 EKIAILVDVQNVYYTCREQYGRHFDYNQFWSQVTQNRTVVKANAYAIASKDPQQR--QFH 59 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 +L + GF+V+ K + ++ K DV +A+D +E ++ ++ +V+ SGDG Sbjct: 60 HILRGI---GFEVMLKPFIQRSDGSA----KGDWDVGIALDGYELAQEVDTVVLVSGDGD 112 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F LV R ++ + V P + + L A F + + Sbjct: 113 FEPLVT---RIAQRFQVKVEVYGVPKLTAQHLIDVASQFHPIEH 153 >gi|15641813|ref|NP_231445.1| hypothetical protein VC1811 [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121585837|ref|ZP_01675631.1| conserved hypothetical protein [Vibrio cholerae 2740-80] gi|121727642|ref|ZP_01680745.1| conserved hypothetical protein [Vibrio cholerae V52] gi|147673789|ref|YP_001217351.1| hypothetical protein VC0395_A1407 [Vibrio cholerae O395] gi|153817839|ref|ZP_01970506.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457] gi|153821111|ref|ZP_01973778.1| conserved hypothetical protein [Vibrio cholerae B33] gi|153828564|ref|ZP_01981231.1| conserved hypothetical protein [Vibrio cholerae 623-39] gi|227081940|ref|YP_002810491.1| hypothetical protein VCM66_1734 [Vibrio cholerae M66-2] gi|229508089|ref|ZP_04397594.1| hypothetical protein VCF_003323 [Vibrio cholerae BX 330286] gi|229511672|ref|ZP_04401151.1| hypothetical protein VCE_003081 [Vibrio cholerae B33] gi|229518811|ref|ZP_04408254.1| hypothetical protein VCC_002836 [Vibrio cholerae RC9] gi|229520283|ref|ZP_04409709.1| hypothetical protein VIF_000801 [Vibrio cholerae TM 11079-80] gi|229607650|ref|YP_002878298.1| hypothetical protein VCD_002562 [Vibrio cholerae MJ-1236] gi|254285238|ref|ZP_04960203.1| conserved hypothetical protein [Vibrio cholerae AM-19226] gi|254848901|ref|ZP_05238251.1| conserved hypothetical protein [Vibrio cholerae MO10] gi|255745423|ref|ZP_05419372.1| hypothetical protein VCH_001771 [Vibrio cholera CIRS 101] gi|262147203|ref|ZP_06028007.1| hypothetical protein VIG_000056 [Vibrio cholerae INDRE 91/1] gi|262169804|ref|ZP_06037495.1| hypothetical protein VIJ_003057 [Vibrio cholerae RC27] gi|9656336|gb|AAF94959.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121549975|gb|EAX59993.1| conserved hypothetical protein [Vibrio cholerae 2740-80] gi|121630029|gb|EAX62436.1| conserved hypothetical protein [Vibrio cholerae V52] gi|126511659|gb|EAZ74253.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457] gi|126521307|gb|EAZ78530.1| conserved hypothetical protein [Vibrio cholerae B33] gi|146315672|gb|ABQ20211.1| conserved hypothetical protein [Vibrio cholerae O395] gi|148875959|gb|EDL74094.1| conserved hypothetical protein [Vibrio cholerae 623-39] gi|150424510|gb|EDN16446.1| conserved hypothetical protein [Vibrio cholerae AM-19226] gi|227009828|gb|ACP06040.1| conserved hypothetical protein [Vibrio cholerae M66-2] gi|227013710|gb|ACP09920.1| conserved hypothetical protein [Vibrio cholerae O395] gi|229342649|gb|EEO07641.1| hypothetical protein VIF_000801 [Vibrio cholerae TM 11079-80] gi|229343500|gb|EEO08475.1| hypothetical protein VCC_002836 [Vibrio cholerae RC9] gi|229351637|gb|EEO16578.1| hypothetical protein VCE_003081 [Vibrio cholerae B33] gi|229355594|gb|EEO20515.1| hypothetical protein VCF_003323 [Vibrio cholerae BX 330286] gi|229370305|gb|ACQ60728.1| hypothetical protein VCD_002562 [Vibrio cholerae MJ-1236] gi|254844606|gb|EET23020.1| conserved hypothetical protein [Vibrio cholerae MO10] gi|255737253|gb|EET92649.1| hypothetical protein VCH_001771 [Vibrio cholera CIRS 101] gi|262022038|gb|EEY40748.1| hypothetical protein VIJ_003057 [Vibrio cholerae RC27] gi|262031360|gb|EEY49970.1| hypothetical protein VIG_000056 [Vibrio cholerae INDRE 91/1] gi|327484370|gb|AEA78777.1| hypothetical protein VCLMA_A1565 [Vibrio cholerae LMA3894-4] Length = 157 Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 42/164 (25%), Positives = 75/164 (45%), Gaps = 13/164 (7%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 EKIA+ +D N+Y + + G DY + V++A Y DP+Q+ H Sbjct: 2 EKIAILVDVQNVYYTCREQYGRHFDYNQFWSQVTQNRTVVKANAYAIASKDPQQR--QFH 59 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 +L + GF+V+ K + ++ K DV +A+D +E ++ ++ +V+ SGDG Sbjct: 60 HILRGI---GFEVMLKPFIQRSDGSA----KGDWDVGIALDGYELAQEVDTVVLVSGDGD 112 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F LV R ++ + V P + + L A F + + Sbjct: 113 FEPLVT---RIAQRFQVKVEVYGVPKLTAQHLIDVASQFHPIEH 153 >gi|153800465|ref|ZP_01955051.1| conserved hypothetical protein [Vibrio cholerae MZO-3] gi|124124091|gb|EAY42834.1| conserved hypothetical protein [Vibrio cholerae MZO-3] Length = 157 Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 42/164 (25%), Positives = 75/164 (45%), Gaps = 13/164 (7%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 EKIA+ +D N+Y + + G DY + V++A Y DP+Q+ H Sbjct: 2 EKIAILVDVQNVYYTCREQYGRHFDYNQFWSQVTQNRTVVKANAYAIASKDPQQR--QFH 59 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 +L + GF+V+ K + ++ K DV +A+D +E ++ ++ +V+ SGDG Sbjct: 60 HILRGI---GFEVMLKPFIQRSDGSA----KGDWDVGIALDGYELAQEVDTVVLVSGDGD 112 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F LV R ++ + V P + + L A F + + Sbjct: 113 FEPLVT---RIAQRFQVKVEVYGVPKLTAQHLIDVASQFHPIEH 153 >gi|90408478|ref|ZP_01216637.1| hypothetical protein PCNPT3_03246 [Psychromonas sp. CNPT3] gi|90310410|gb|EAS38536.1| hypothetical protein PCNPT3_03246 [Psychromonas sp. CNPT3] Length = 157 Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 69/141 (48%), Gaps = 10/141 (7%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 +KIA+F D N+Y +S+ A +YRKL + + + + A+ Y GD +QQ Sbjct: 2 KKIAIFADVQNIYYTSRDAYKKSFNYRKLWQQIKEQGDICYAFAYAIDKGDRQQQ----- 56 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 D L + GF++ K + + C K DV + +D + + ++ +++ SGDG Sbjct: 57 KFQDVLRHLGFEI---KLKPYIQRCD-GSAKGDWDVGITIDIMQIAPRVDCIILLSGDGD 112 Query: 125 FTTLVAALQRKVKKVTIVSTV 145 F L+ + ++ K T V V Sbjct: 113 FAILLETVNKRDKVETQVYGV 133 >gi|198282948|ref|YP_002219269.1| hypothetical protein Lferr_0812 [Acidithiobacillus ferrooxidans ATCC 53993] gi|218667530|ref|YP_002425151.1| hypothetical protein AFE_0663 [Acidithiobacillus ferrooxidans ATCC 23270] gi|198247469|gb|ACH83062.1| protein of unknown function DUF88 [Acidithiobacillus ferrooxidans ATCC 53993] gi|218519743|gb|ACK80329.1| conserved hypothetical protein [Acidithiobacillus ferrooxidans ATCC 23270] Length = 318 Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 38/144 (26%), Positives = 72/144 (50%), Gaps = 13/144 (9%) Query: 8 IALFIDGANL-YASSKALGFDIDYRKLLKAFRSR---AIVIRAYYYTTVVGDPEQQFSPL 63 I +++D N+ Y A+ +D+ L+ F R A ++R Y V G+ ++ Sbjct: 8 IGVYVDAENIRYNGGYAMRYDV-----LRRFAGREEEARLLRLNTYMAVDGERMKRDREY 62 Query: 64 HPLLDWLHYN----GFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIF 119 + G++++ K + F + G K++ D++LAVD QSE L+ +++ Sbjct: 63 RERIRGYQQAVRDLGWKIIEKPVRWFVDEEGNSMSKANADLDLAVDVMLQSERLDQVLLV 122 Query: 120 SGDGCFTTLVAALQRKVKKVTIVS 143 +GDG F +V ALQ K +V +++ Sbjct: 123 TGDGDFLQVVRALQNKGCRVEVLA 146 >gi|288939925|ref|YP_003442165.1| hypothetical protein Alvin_0164 [Allochromatium vinosum DSM 180] gi|288895297|gb|ADC61133.1| protein of unknown function DUF88 [Allochromatium vinosum DSM 180] Length = 277 Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 35/144 (24%), Positives = 70/144 (48%), Gaps = 12/144 (8%) Query: 7 KIALFIDGANL-YASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS---- 61 ++ +F+D N+ Y + +DI L+ F +R + T + D E+ Sbjct: 6 RVGVFVDAENVRYNGGYQMRYDI-----LRRFAAREGGVLQRLNTYMAYDAERAREDYEY 60 Query: 62 --PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIF 119 H + G+++ AK + +T++ G K++ D+++AVDA Q+ L+ +++ Sbjct: 61 KKKAHAYQQMVRDFGWKITAKTVRRYTDDNGNVTTKANADLDMAVDAMLQANRLDQVLLV 120 Query: 120 SGDGCFTTLVAALQRKVKKVTIVS 143 +GDG F +V ALQ +V ++ Sbjct: 121 TGDGDFLQVVEALQNTGCRVELIG 144 >gi|330504961|ref|YP_004381830.1| hypothetical protein MDS_4047 [Pseudomonas mendocina NK-01] gi|328919247|gb|AEB60078.1| hypothetical protein MDS_4047 [Pseudomonas mendocina NK-01] Length = 159 Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 43/161 (26%), Positives = 71/161 (44%), Gaps = 16/161 (9%) Query: 6 EKIALFIDGANLYASSKAL-GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP-EQQFSPL 63 +KIA+F D NLY + + + G DY L R +++ AY Y GD +QQF + Sbjct: 2 KKIAVFADVQNLYYTVRQVHGCHFDYSVLWAEVSRRGVIVEAYAYAIDRGDAKQQQFQQI 61 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + + K DV + +D + E ++ +V+ SGDG Sbjct: 62 ------LRKLGFTVKLKPYIQRADGSA----KGDWDVGITIDVLDAVERVDEIVLASGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F L+ +V+ + + P + + L R A ++ Sbjct: 112 DFDLLL----ERVRSRGVEAIAFGAPGLTAQSLIRAASLYV 148 >gi|163782049|ref|ZP_02177048.1| hypothetical protein HG1285_17989 [Hydrogenivirga sp. 128-5-R1-1] gi|159882581|gb|EDP76086.1| hypothetical protein HG1285_17989 [Hydrogenivirga sp. 128-5-R1-1] Length = 165 Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 48/169 (28%), Positives = 79/169 (46%), Gaps = 13/169 (7%) Query: 6 EKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 ++ +FIDG NLY K L ID KL++ F+ + ++Y + ++Q Sbjct: 2 KRAGIFIDGTNLYFVQKNFLHRKIDIVKLVEYFKRFYSIYNVFFYLAYREEDDKQ----E 57 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 L ++G VV K K + +K ++DVE+ +D + + V+ SGD Sbjct: 58 KFYRMLAFSGITVVRKPLKHLPDGS----LKGNLDVEIVIDMLLTKDNYDVAVLCSGDSD 113 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 F L+ L+ K+V VST D S S ++ AD ++DL + EI Sbjct: 114 FEKLINVLRSFGKEVVCVST--RDSS--SIEVVNAADRYIDLRDIIEEI 158 >gi|91791739|ref|YP_561390.1| hypothetical protein Sden_0372 [Shewanella denitrificans OS217] gi|91713741|gb|ABE53667.1| protein of unknown function DUF88 [Shewanella denitrificans OS217] Length = 184 Score = 51.2 bits (121), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 48/167 (28%), Positives = 77/167 (46%), Gaps = 15/167 (8%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 +KIALF+D N+Y + + A G +YRKL + + +++A Y GD Q Sbjct: 29 KKIALFVDVQNIYYTCREAYGRQFNYRKLWQLVSQQGEIVQAVAYAIHKGDDGQL----- 83 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 D L + GF+V K F + K DV + +D E + + +++ SGDG Sbjct: 84 KFQDALKHIGFEV---KLKPFIQRA-DGSAKGDWDVGITIDVMEAAADVNTVILLSGDGD 139 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF--MDLAYL 169 F L+ + +K T V V PS+ + L A F +D ++L Sbjct: 140 FDRLLVKIYQKHGVDTQVYGV---PSLTAKSLMDSAGQFHPIDASWL 183 >gi|312963199|ref|ZP_07777683.1| protein of unknown function DUF88 [Pseudomonas fluorescens WH6] gi|311282465|gb|EFQ61062.1| protein of unknown function DUF88 [Pseudomonas fluorescens WH6] Length = 158 Score = 51.2 bits (121), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 15/161 (9%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP-EQQFSPL 63 +KIA+F D NLY + + A G +Y L +R ++ AY Y GD +QQF + Sbjct: 2 KKIAVFADVQNLYYTVRQAYGCHFNYAALWADISARGQIVEAYAYAIDRGDSKQQQFQQI 61 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + + K DV + +D + ++ ++ +V+ SGDG Sbjct: 62 ------LRNLGFTVKLKPYIQRADGS----AKGDWDVGITLDIMDAADHVDEVVLASGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F L L+R + K + + P + ++ L R A ++ Sbjct: 112 DFDML---LERIIHKHGVHAVAYGVPGLTANSLIRAASRYV 149 >gi|115360984|ref|YP_778121.1| hypothetical protein Bamb_6243 [Burkholderia ambifaria AMMD] gi|115286312|gb|ABI91787.1| protein of unknown function DUF88 [Burkholderia ambifaria AMMD] Length = 272 Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 38/146 (26%), Positives = 77/146 (52%), Gaps = 16/146 (10%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLK-AFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 ++ +++DG+++ A+ L + Y L A R+ A + R + Y + +++ + P Sbjct: 6 RVGVYVDGSSMDANGGHL---MRYEVLRSLAGRAGATIQRLHAYLSF----DERRAARSP 58 Query: 66 LLDW--------LHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLV 117 D L GF+V K + + ++ G + VKS+ D+ +A+DA +S+ L+ ++ Sbjct: 59 DYDARIKGYQAALRDKGFRVTIKPLRHYADDDGTETVKSNSDLGMAIDALSESDRLDTVL 118 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVS 143 I + DG F +V ALQ+K +V ++ Sbjct: 119 IATSDGDFVEVVRALQKKGCRVEVLG 144 >gi|330976912|gb|EGH76935.1| hypothetical protein PSYAP_09660 [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 158 Score = 50.8 bits (120), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 44/163 (26%), Positives = 75/163 (46%), Gaps = 15/163 (9%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP-EQQFSPL 63 +KIA+F D NLY + + A G +Y L R R ++ A+ Y GD +QQF + Sbjct: 2 KKIAVFADVQNLYYTVRQAHGCHFNYAALWADIRKRGEIVHAFAYAIDRGDSKQQQFQQI 61 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + ++ K DV + +D + + ++ +V+ SGDG Sbjct: 62 ------LRNLGFTVRLKPYIQRSDGS----AKGDWDVGITIDIMDFAPQVDEIVLASGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 F L L+R + K + + P + ++ L R A ++ + Sbjct: 112 DFDML---LERVISKHGVEAVAYGVPGLTANSLIRAASRYVPI 151 >gi|46200099|ref|YP_005766.1| hypothetical protein TTC1797 [Thermus thermophilus HB27] gi|55980158|ref|YP_143455.1| hypothetical protein TTHA0189 [Thermus thermophilus HB8] gi|46197727|gb|AAS82139.1| hypothetical conserved protein [Thermus thermophilus HB27] gi|55771571|dbj|BAD70012.1| conserved hypothetical protein [Thermus thermophilus HB8] Length = 181 Score = 50.8 bits (120), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 51/170 (30%), Positives = 87/170 (51%), Gaps = 20/170 (11%) Query: 6 EKIALFIDGANLYAS-SKALGFD-----IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59 E++A+FIDG+NLY + LG D +++ LL A R ++RAYYY + PE Sbjct: 2 ERVAIFIDGSNLYKGLVQHLGSDYRLNFVEFITLLTAGRK---LLRAYYYNAPL-PPEDP 57 Query: 60 FSPLH-PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHL 116 + H L++L + V ++ + E V+ +D+++AVD + + Sbjct: 58 AAKAHQSFLNYLKRVPY-VTVRLGR--LERRADGFVEKGVDIQIAVDMLRLAFVNAYDIA 114 Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 V+ SGDG F +V +Q K+V +T +++S +L +QAD+F L Sbjct: 115 VLVSGDGDFAEVVRVVQDLGKQVE--NTTFH--ALSSHRLAQQADHFYPL 160 >gi|114046654|ref|YP_737204.1| hypothetical protein Shewmr7_1148 [Shewanella sp. MR-7] gi|113888096|gb|ABI42147.1| protein of unknown function DUF88 [Shewanella sp. MR-7] Length = 157 Score = 50.4 bits (119), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 43/161 (26%), Positives = 76/161 (47%), Gaps = 15/161 (9%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ-QFSPL 63 +KIALF+D N+Y + + A +YRKL + ++ ++ A Y GD Q +F Sbjct: 2 KKIALFVDVQNIYYTCREAYQRQFNYRKLWQQLSTQGEIVSAIAYAIHRGDDGQLKFQ-- 59 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 D L + GF++ K + ++ K DV + +D E + ++ +++ SGDG Sbjct: 60 ----DALRHIGFELKLKPFIQRSDGSA----KGDWDVGITIDVLEMAPEVDTVILLSGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F L L + +K + + V PS+ + L A F+ Sbjct: 112 DFALL---LDKIRQKYAVEAEVYGVPSLTAKSLMDAATQFI 149 >gi|257389218|ref|YP_003178991.1| hypothetical protein Hmuk_3179 [Halomicrobium mukohataei DSM 12286] gi|257171525|gb|ACV49284.1| protein of unknown function DUF88 [Halomicrobium mukohataei DSM 12286] Length = 165 Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 47/166 (28%), Positives = 82/166 (49%), Gaps = 16/166 (9%) Query: 4 PREKIALFIDGANLYASSKALGF-DIDYRKLL-KAFRSRAIVIRAYYYTTVVGDPEQQFS 61 P +++ + D NLY ++++L +IDY LL +A RA+ RA Y P+++ Sbjct: 6 PGQRVGVLADAQNLYHTARSLHTRNIDYEALLDEAVNDRALT-RAIAYVIRANSPDEE-- 62 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 + L GF+ K K F G K+ DV +++DA + ++ +V+ +G Sbjct: 63 ---SFFEALEDIGFETRIKDIKTF----GDGSKKADWDVGMSLDAVSLAPHVDTVVLITG 115 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 DG F L L+ + K V T+ + S A ++L AD+F +L+ Sbjct: 116 DGDFARLCRYLRHEGVK---VETMGFEESTA-EELVEAADHFRNLS 157 >gi|153826226|ref|ZP_01978893.1| conserved hypothetical protein [Vibrio cholerae MZO-2] gi|149739991|gb|EDM54166.1| conserved hypothetical protein [Vibrio cholerae MZO-2] Length = 157 Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 41/164 (25%), Positives = 75/164 (45%), Gaps = 13/164 (7%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 EKIA+ +D N+Y + + G +Y + V++A Y DP+Q+ H Sbjct: 2 EKIAILVDVQNVYYTCREQYGRHFEYNQFWSQVTQNRTVVKANAYAIASKDPQQR--QFH 59 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 +L + GF+V+ K + ++ K DV +A+D +E ++ ++ +V+ SGDG Sbjct: 60 HILRGI---GFEVMLKPFIQRSDGSA----KGDWDVGIALDGYELAQEVDTVVLVSGDGD 112 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F LV R ++ + V P + + L A F + + Sbjct: 113 FEPLVT---RIAQRFQVKVEVYGVPKLTAQHLIDVASQFHPIEH 153 >gi|288817663|ref|YP_003432010.1| hypothetical protein HTH_0343 [Hydrogenobacter thermophilus TK-6] gi|288787062|dbj|BAI68809.1| hypothetical protein HTH_0343 [Hydrogenobacter thermophilus TK-6] gi|308751261|gb|ADO44744.1| protein of unknown function DUF88 [Hydrogenobacter thermophilus TK-6] Length = 199 Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 48/171 (28%), Positives = 78/171 (45%), Gaps = 17/171 (9%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGD-------PE- 57 E++ +FIDG+NL+ + + L IDY+KL+ +IRAY+Y + + PE Sbjct: 4 ERVIIFIDGSNLFHAIRYLNIRIDYQKLVDFLTEGRRLIRAYFYGAMPHEKDVKKNTPEW 63 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEH 115 + L+ L G +V K+ + V+ +D+ LA D + + Sbjct: 64 ESLLRQKRFLEELSLMGIKVKTAHLKKLPSG---EYVEKEVDIMLATDMLSMAYMNTYDT 120 Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 V+ SGD ++ V +QR KKV S +S QLR+ D F+ L Sbjct: 121 AVLISGDSDYSYTVEEVQRIGKKVENASF----KRTSSYQLRKACDRFILL 167 >gi|332306977|ref|YP_004434828.1| hypothetical protein Glaag_2619 [Glaciecola agarilytica 4H-3-7+YE-5] gi|332174306|gb|AEE23560.1| hypothetical protein Glaag_2619 [Glaciecola agarilytica 4H-3-7+YE-5] Length = 158 Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 42/161 (26%), Positives = 76/161 (47%), Gaps = 13/161 (8%) Query: 7 KIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 KIA+F+D N+Y +++ + +YRK + ++ ++ A Y T D +QQ Sbjct: 4 KIAVFVDVQNIYYTTRDSYQKQFNYRKFWQHLSAQGDIVIANAYATERHDTQQQ-----K 58 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125 L + GF V K + ++ K DV + +D + + ++ +V+ SGDG F Sbjct: 59 FQSALKHIGFNVKLKPFIQRSDGSA----KGDWDVGITIDVLDAAPHVDTVVLLSGDGDF 114 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 L+ A + K K T V V P++ + L D F+++ Sbjct: 115 DLLLKAAKDKYKVGTKVYGV---PALTASSLMNACDEFIEI 152 >gi|86608534|ref|YP_477296.1| hypothetical protein CYB_1055 [Synechococcus sp. JA-2-3B'a(2-13)] gi|86557076|gb|ABD02033.1| conserved hypothetical protein [Synechococcus sp. JA-2-3B'a(2-13)] Length = 382 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 43/164 (26%), Positives = 77/164 (46%), Gaps = 14/164 (8%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 PR+ + +FID ANL+AS++ G +DY LL + + Y+ V ++ Sbjct: 211 PRKALGVFIDAANLHASAQQWGSHLDYPSLLSWLAQGRSEMEVHVYSGV----DRHNLAQ 266 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L L G++VV K + K+++D EL VD E +++ SGDG Sbjct: 267 RRFLRELRKQGYRVVTKPVVIHADGSR----KANLDGELIVDLMALHSHYETVLLLSGDG 322 Query: 124 CFTTLVAALQRKVKKVTIVS-TVLSDPSMASDQLRRQADYFMDL 166 F + ++R+ ++ + + ++P++ R AD F+DL Sbjct: 323 DFVPALKHIRRQGCRLEVAAYRPNTNPALI-----RIADQFVDL 361 >gi|261211879|ref|ZP_05926166.1| hypothetical protein VCJ_002142 [Vibrio sp. RC341] gi|260839229|gb|EEX65861.1| hypothetical protein VCJ_002142 [Vibrio sp. RC341] Length = 157 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 45/165 (27%), Positives = 79/165 (47%), Gaps = 15/165 (9%) Query: 6 EKIALFIDGANLYASSKA-LGFDIDYRKLL-KAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 EKIA+ +D N+Y + + G DY + +A + RA+V +A Y DP+Q+ Sbjct: 2 EKIAILVDVQNVYYTCRERYGRHFDYNQFWSQATQGRAVV-KANAYAIASKDPQQR--QF 58 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 H +L + GF+V+ K + ++ K DV +A+D +E ++ + +V+ SGDG Sbjct: 59 HHILRGI---GFEVMLKPFIQRSDGSA----KGDWDVGIALDGYELAQEVNTVVLVSGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F LV R ++ + V P + + L A F + + Sbjct: 112 DFEPLVT---RIAQRFQVKVEVYGVPKLTAQHLIDVASQFHPIEH 153 >gi|113969424|ref|YP_733217.1| hypothetical protein Shewmr4_1080 [Shewanella sp. MR-4] gi|113884108|gb|ABI38160.1| protein of unknown function DUF88 [Shewanella sp. MR-4] Length = 184 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 43/163 (26%), Positives = 76/163 (46%), Gaps = 15/163 (9%) Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ-QF 60 +P ++IALF+D N+Y + + A +Y KL + ++ ++ A Y GD Q +F Sbjct: 26 NPLKRIALFVDVQNIYYTCREAYQRQFNYCKLWQQLSAQGEIVSAIAYAIHRGDDGQLKF 85 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 D L + GF++ K + ++ K DV + +D E + ++ +++ S Sbjct: 86 Q------DALRHIGFELKLKPFIQRSDG----SAKGDWDVGITIDVLEMAPEVDTVILLS 135 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163 GDG F L L + +K I + V PS+ + L A F Sbjct: 136 GDGDFALL---LDKIRQKYAIEAEVYGVPSLTAKSLMEAASCF 175 >gi|67921188|ref|ZP_00514707.1| Protein of unknown function DUF88 [Crocosphaera watsonii WH 8501] gi|67857305|gb|EAM52545.1| Protein of unknown function DUF88 [Crocosphaera watsonii WH 8501] Length = 134 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 8/107 (7%) Query: 69 WLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTL 128 W+ NG++V+AK + + G K K+++DVE+AVD + +I SGDG Sbjct: 14 WMRRNGYRVIAKDLVQLPD--GSK--KANLDVEIAVDLMALVGSYDTAIIVSGDGDLAYA 69 Query: 129 VAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 ++ + ++ +VS SM SD L AD ++DL +K +I + Sbjct: 70 ADSVSYRGARIEVVSL----RSMTSDSLINVADRYIDLDQIKEDIQK 112 >gi|218296000|ref|ZP_03496780.1| protein of unknown function DUF88 [Thermus aquaticus Y51MC23] gi|218243738|gb|EED10266.1| protein of unknown function DUF88 [Thermus aquaticus Y51MC23] Length = 181 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 49/170 (28%), Positives = 87/170 (51%), Gaps = 20/170 (11%) Query: 6 EKIALFIDGANLYAS-SKALGFD-----IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59 E++A+FIDG+NLY + LG D +++ LL A R ++RAYYY + PE Sbjct: 2 ERVAIFIDGSNLYKGLVQHLGSDYRLNFVEFITLLTAGRK---LLRAYYYNAPL-PPEDP 57 Query: 60 FSPLH-PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHL 116 + H L++L + V ++ + E V+ +D+++A+D ++ + Sbjct: 58 AAKAHQSFLNYLKRVPY-VAVRLGR--LERRAEGFVEKGVDIQIAIDILRLAYADAYDIA 114 Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 ++ SGDG F +V +Q K+V +T +++S +L +QAD F L Sbjct: 115 ILVSGDGDFAEVVRVVQDMGKQVE--NTTFH--ALSSHRLAQQADRFYPL 160 >gi|104783731|ref|YP_610229.1| hypothetical protein PSEEN4789 [Pseudomonas entomophila L48] gi|95112718|emb|CAK17446.1| conserved hypothetical protein [Pseudomonas entomophila L48] Length = 167 Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 45/163 (27%), Positives = 73/163 (44%), Gaps = 15/163 (9%) Query: 6 EKIALFIDGANLYASSKAL-GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP-EQQFSPL 63 +KIALF D NLY + + + G +Y L ++ A Y GD +QQF + Sbjct: 10 KKIALFADVQNLYYTVRQVHGCHFNYTTLWAEVSREGQIVEAVAYAIDRGDSKQQQFQQI 69 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF+V K + + K DV + +D E +E ++ +V+ SGDG Sbjct: 70 ------LRNLGFEVRLKPYIQRADGSA----KGDWDVGITLDVIEAAERVDQVVLASGDG 119 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 F L L+R K+ + + V P + + L R A ++ + Sbjct: 120 DFDLL---LERAAKRHGVETVVYGVPGLTALSLIRSASRYVPI 159 >gi|157960982|ref|YP_001501016.1| hypothetical protein Spea_1154 [Shewanella pealeana ATCC 700345] gi|157845982|gb|ABV86481.1| protein of unknown function DUF88 [Shewanella pealeana ATCC 700345] Length = 157 Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 43/162 (26%), Positives = 75/162 (46%), Gaps = 13/162 (8%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 ++IALF+D N+Y + + A G +YRKL + V +A Y GD Q Sbjct: 2 KRIALFVDVQNIYYTCRQAYGKQFNYRKLWQHLGYEGDVSQATAYAIHRGDDGQL----- 56 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 D L + GF+V K + ++ K DV + +D E + ++ +++ SGDG Sbjct: 57 KFQDALKHIGFEVKLKPFIQRSDGS----AKGDWDVGITIDIMEAASEVDCVILLSGDGD 112 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 F L +QR +K + + V P++ + L + F ++ Sbjct: 113 FDLL---MQRIHQKYGVETQVYGVPTLTAKSLIDSVNQFHEI 151 >gi|320449117|ref|YP_004201213.1| hypothetical protein TSC_c00110 [Thermus scotoductus SA-01] gi|320149286|gb|ADW20664.1| hypothetical protein TSC_c00110 [Thermus scotoductus SA-01] Length = 181 Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 50/170 (29%), Positives = 87/170 (51%), Gaps = 20/170 (11%) Query: 6 EKIALFIDGANLYAS-SKALGFD-----IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59 E++A+FIDG+NLY + LG D +++ LL A R ++RAYYY + PE Sbjct: 2 ERVAIFIDGSNLYKGLVQHLGPDYRLNFVEFISLLTAGRR---LLRAYYYNAPL-PPEDP 57 Query: 60 FSPLH-PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHL 116 + H L++L + V ++ + E V+ +D+++A+D ++ + Sbjct: 58 AAKAHQSFLNYLKRVPY-VAVRLGR--LERRADGFVEKGVDIQIAIDILRLAYADAYDVA 114 Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 V+ SGDG F +V +Q K+V +T +++S +L +QAD F L Sbjct: 115 VLVSGDGDFAEVVKVVQDMGKQVE--NTTFH--ALSSHRLAQQADRFYPL 160 >gi|167623131|ref|YP_001673425.1| hypothetical protein Shal_1197 [Shewanella halifaxensis HAW-EB4] gi|167353153|gb|ABZ75766.1| protein of unknown function DUF88 [Shewanella halifaxensis HAW-EB4] Length = 172 Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 44/162 (27%), Positives = 74/162 (45%), Gaps = 13/162 (8%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 +KIALF+D N+Y + + A G +YRKL + + A Y GD Q Sbjct: 17 KKIALFVDVQNIYYTCRQAYGRQFNYRKLWQHLGYEGNISAATAYAIHRGDDGQL----- 71 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 D L + GF+V K + ++ K DV + +D E + ++ +++ SGDG Sbjct: 72 KFQDALKHIGFEVKLKPFIQRSDG----SAKGDWDVGITIDIMEAASEVDCVILLSGDGD 127 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 F L +Q+ +K I + V PS+ + L + F ++ Sbjct: 128 FDLL---MQKIKQKYGIETQVYGVPSLTAKSLIDSVEQFHEI 166 >gi|323497755|ref|ZP_08102770.1| hypothetical protein VISI1226_04395 [Vibrio sinaloensis DSM 21326] gi|323317231|gb|EGA70227.1| hypothetical protein VISI1226_04395 [Vibrio sinaloensis DSM 21326] Length = 160 Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 13/160 (8%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 EKIA+F+D N+Y +++ + DY + V+ A Y DP+Q+ H Sbjct: 2 EKIAIFVDVQNIYYTTRDKYRANFDYNQFWYVATEGQQVVSASAYAIASTDPKQR--QFH 59 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 +L + GF V K + ++ K DV +A+D +E + ++ +++ SGDG Sbjct: 60 HILRGI---GFDVKLKPYIQRSDGS----TKGDWDVGIALDVYELASQVDRVILLSGDGD 112 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F LV +Q++ V V P + + L D F+ Sbjct: 113 FEMLVTRIQQRFATKVDVYAV---PGLTAQNLIDVCDKFI 149 >gi|55377125|ref|YP_134975.1| hypothetical protein rrnAC0208 [Haloarcula marismortui ATCC 43049] gi|55229850|gb|AAV45269.1| unknown [Haloarcula marismortui ATCC 43049] Length = 165 Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 45/165 (27%), Positives = 82/165 (49%), Gaps = 14/165 (8%) Query: 4 PREKIALFIDGANLYASSKAL-GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 P +++A+ D NLY ++++L +IDY LL+ + RA Y PE++ S Sbjct: 6 PGQRVAVLADAQNLYHTARSLYSRNIDYEALLEEAVDGRELTRAIAYVIRADSPEEE-SF 64 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122 L+D GF+ K K F + G K K+ DV +++DA + ++ +V+ +GD Sbjct: 65 FEALVDI----GFETRIKDIKTFQD--GSK--KADWDVGMSLDAVSLANHVDTVVLCTGD 116 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 G F + L+ + +V + S +S+ L+ D F+D++ Sbjct: 117 GDFARVCRYLRHEGCRVEAMGFEES----SSEDLKAAVDGFIDMS 157 >gi|319959088|gb|ADV90708.1| LabA [Nostoc linckia EC108] Length = 127 Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 57/105 (54%), Gaps = 8/105 (7%) Query: 73 NGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAAL 132 NG++V+AK + + G K K+++DVE+AVD + + V+ SGDG V ++ Sbjct: 2 NGYRVIAKDLVQLPD--GSK--KANLDVEIAVDMMALVDSYDTAVLVSGDGDLAYAVNSV 57 Query: 133 QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 + +V +VS SM SD L +D ++DL +K +I + P Sbjct: 58 SYRGVRVEVVSL----RSMTSDSLINVSDRYIDLEAIKEDIQKTP 98 >gi|323492730|ref|ZP_08097874.1| hypothetical protein VIBR0546_00630 [Vibrio brasiliensis LMG 20546] gi|323313105|gb|EGA66225.1| hypothetical protein VIBR0546_00630 [Vibrio brasiliensis LMG 20546] Length = 160 Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 36/131 (27%), Positives = 62/131 (47%), Gaps = 10/131 (7%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 EK+A+F+D N+Y +++ + DY + V+ A Y DP+Q+ H Sbjct: 2 EKVAIFVDVQNIYYTTRDKYRANFDYNQFWYIATEGREVVSANAYAIASHDPKQR--QFH 59 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 +L + +N ++ N G K DV LA+D FE + ++ +++ SGDG Sbjct: 60 HILRGIGFN-----VQLKPFIQRNDGS--AKGDWDVGLALDVFETASQVDRVILLSGDGD 112 Query: 125 FTTLVAALQRK 135 F LV +Q + Sbjct: 113 FDVLVDRIQSR 123 >gi|77461146|ref|YP_350653.1| hypothetical protein Pfl01_4925 [Pseudomonas fluorescens Pf0-1] gi|77385149|gb|ABA76662.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1] Length = 159 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 43/161 (26%), Positives = 73/161 (45%), Gaps = 15/161 (9%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP-EQQFSPL 63 +KIA+F D NLY + + A G +Y L ++ AY Y GD +QQF + Sbjct: 2 KKIAVFADVQNLYYTVRQAYGCHFNYAALWADVSQHGQIVEAYAYAIDRGDSKQQQFQQI 61 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + ++ K DV + +D + ++ ++ +V+ SGDG Sbjct: 62 ------LRNLGFTVKLKPYIQRSDGS----AKGDWDVGITLDIMDAADHVDEIVLASGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F L L+R + K + + P + ++ L R A ++ Sbjct: 112 DFDML---LERIINKHGVQAVAYGVPGLTANSLIRAASRYV 149 >gi|163783881|ref|ZP_02178857.1| hypothetical protein HG1285_05285 [Hydrogenivirga sp. 128-5-R1-1] gi|159880844|gb|EDP74372.1| hypothetical protein HG1285_05285 [Hydrogenivirga sp. 128-5-R1-1] Length = 174 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 45/175 (25%), Positives = 81/175 (46%), Gaps = 14/175 (8%) Query: 4 PREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 +++A+F+D NLY S++ +D+ K+L + +IRA Y + +Q+ Sbjct: 7 KNQRVAVFLDVQNLYYSARDVFNRKVDFEKVLFKILNGRQLIRALAYIIKLQGVDQK--- 63 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFT----ENCGRKRVKSSMDVELAVDAFEQSEGLEHLVI 118 + L + G+++ K K + E +K+ D+ +A+DA +E ++ V+ Sbjct: 64 --GFISSLKHIGYEIKEKEPKIYKRLDEEGNLITTIKADWDMGIAMDAISIAEKIDVAVL 121 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 +GDG F LV L K KV I + + +L D F+DL + EI Sbjct: 122 TTGDGDFADLVKYLHTKGVKVEIAAF----KQTTAKELIEVCDEFIDLTHFGEEI 172 >gi|322369896|ref|ZP_08044458.1| hypothetical protein ZOD2009_10415 [Haladaptatus paucihalophilus DX253] gi|320550232|gb|EFW91884.1| hypothetical protein ZOD2009_10415 [Haladaptatus paucihalophilus DX253] Length = 165 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 45/166 (27%), Positives = 79/166 (47%), Gaps = 16/166 (9%) Query: 4 PREKIALFIDGANLYASSKAL-GFDIDYRKLL-KAFRSRAIVIRAYYYTTVVGDPEQQFS 61 P +++ + D NLY +++++ +IDY LL KA + R + RA Y P++ Sbjct: 6 PGQRVTVLADAQNLYHTAQSVYSRNIDYSSLLSKAAQDRELT-RAIAYVIQADSPDED-- 62 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 D L GF+ K K F G K+ DV + +DA + ++ +V+ +G Sbjct: 63 ---RFFDALTDIGFEAKIKAIKTF----GDGSKKADWDVGICLDAITLAPKVDTVVLCTG 115 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 DG F L L+ + +V ++ S +++L AD F+DL+ Sbjct: 116 DGDFAQLATHLRHEGVRVEVMGFQES----TAEELIAAADSFIDLS 157 >gi|146308745|ref|YP_001189210.1| hypothetical protein Pmen_3730 [Pseudomonas mendocina ymp] gi|145576946|gb|ABP86478.1| protein of unknown function DUF88 [Pseudomonas mendocina ymp] Length = 159 Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 16/161 (9%) Query: 6 EKIALFIDGANLYASSKAL-GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP-EQQFSPL 63 +KIA+F D NLY + + + G DY L R ++ AY Y GD +QQF + Sbjct: 2 KKIAVFADVQNLYYTVRQVHGCHFDYSVLWAEVSRRGVIAEAYAYAIDRGDAKQQQFQQI 61 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + + K DV + +D + E ++ +V+ SGDG Sbjct: 62 ------LRKLGFTVKLKPYIQRADGSA----KGDWDVGITIDVLDALERVDEIVLASGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F L+ +V+ + + P + + L R A ++ Sbjct: 112 DFDLLL----ERVRSRGVEAIAFGVPGLTAQSLIRAASLYV 148 >gi|260773921|ref|ZP_05882836.1| hypothetical protein VIB_002400 [Vibrio metschnikovii CIP 69.14] gi|260610882|gb|EEX36086.1| hypothetical protein VIB_002400 [Vibrio metschnikovii CIP 69.14] Length = 157 Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 36/133 (27%), Positives = 68/133 (51%), Gaps = 10/133 (7%) Query: 6 EKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 EKIA+ +D N+Y + + G +Y + + V +A Y +P+Q+ H Sbjct: 2 EKIAILVDVQNVYYTCRERYGRHFNYNQFWQQVTQGRHVFKANAYAIASKEPQQR--QFH 59 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 +L + GF+V+ K + ++ K DV +A+DA+E ++ ++ +V+ SGDG Sbjct: 60 HILRGV---GFEVMLKPFIQRSDGSA----KGDWDVGIALDAYELAQQVDTVVLVSGDGD 112 Query: 125 FTTLVAALQRKVK 137 F LV +Q++ + Sbjct: 113 FEPLVERIQQRFQ 125 >gi|229523840|ref|ZP_04413245.1| hypothetical protein VCA_001419 [Vibrio cholerae bv. albensis VL426] gi|229337421|gb|EEO02438.1| hypothetical protein VCA_001419 [Vibrio cholerae bv. albensis VL426] Length = 157 Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 41/164 (25%), Positives = 74/164 (45%), Gaps = 13/164 (7%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 EKIA+ +D N+Y + + G DY + V++A Y P+Q+ H Sbjct: 2 EKIAILVDVQNVYYTCREQYGRHFDYNQFWSQVTQNRTVVKANAYAIASKAPQQR--QFH 59 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 +L + GF+V+ K + ++ K DV +A+D +E ++ ++ +V+ SGDG Sbjct: 60 HILRGI---GFEVMLKPFIQRSDGSA----KGDWDVGIALDGYELAQEVDTVVLVSGDGD 112 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F LV R ++ + V P + + L A F + + Sbjct: 113 FEPLVT---RIAQRFQVKVEVYGVPKLTAQHLIDVASQFHPIEH 153 >gi|229529164|ref|ZP_04418554.1| hypothetical protein VCG_002257 [Vibrio cholerae 12129(1)] gi|229332938|gb|EEN98424.1| hypothetical protein VCG_002257 [Vibrio cholerae 12129(1)] Length = 157 Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 41/164 (25%), Positives = 74/164 (45%), Gaps = 13/164 (7%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 EKIA+ +D N+Y + + G DY + V++A Y P+Q+ H Sbjct: 2 EKIAILVDVQNVYYTCREQYGRHFDYNQFWSQVTQNRTVVKANAYAIASKAPQQR--QFH 59 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 +L + GF+V+ K + ++ K DV +A+D +E ++ ++ +V+ SGDG Sbjct: 60 HILRGI---GFEVMLKPFIQRSDGSA----KGDWDVGIALDGYELAQEVDTVVLVSGDGD 112 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F LV R ++ + V P + + L A F + + Sbjct: 113 FEPLVT---RIAQRFQVKVEVYGVPKLTAQHLIDVASQFHPIEH 153 >gi|163751027|ref|ZP_02158258.1| hypothetical protein KT99_04722 [Shewanella benthica KT99] gi|161329188|gb|EDQ00187.1| hypothetical protein KT99_04722 [Shewanella benthica KT99] Length = 159 Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 13/164 (7%) Query: 4 PREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 +KIA+F+D N+Y + + A G +YRKL + + ++ A Y GD Q Sbjct: 2 TNKKIAIFVDVQNIYYTCRQAYGRQFNYRKLWQHIGHKGDIVSATAYAIHKGDEGQL--- 58 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122 D L + GF + K + ++ K DV +A+D E + ++ +++ SGD Sbjct: 59 --KFQDALKHIGFDIKLKPFIQRSDG----SAKGDWDVGIAIDVMEAAAEVDTIILLSGD 112 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 G F L+ + +K T V V P++ + L + F+++ Sbjct: 113 GDFDLLMLKIYQKYGVDTQVYGV---PALTAKSLIDASCKFIEI 153 >gi|330969505|gb|EGH69571.1| hypothetical protein PSYAR_03309 [Pseudomonas syringae pv. aceris str. M302273PT] Length = 158 Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 15/163 (9%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP-EQQFSPL 63 +KIA+F D NLY + + A G +Y L R ++ A+ Y GD +QQF + Sbjct: 2 KKIAVFADVQNLYYTVRQAHGCHFNYAALWADISKRGEIVHAFAYAIDRGDSKQQQFQQI 61 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + ++ K DV + +D + + ++ +V+ SGDG Sbjct: 62 ------LRNLGFTVRLKPYIQRSDGS----AKGDWDVGITIDIMDYAPQVDEIVLASGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 F L L+R + K + + P + ++ L R A ++ + Sbjct: 112 DFDML---LERVISKHGVEAVAYGVPGLTANSLIRAASRYVPI 151 >gi|330811889|ref|YP_004356351.1| hypothetical protein PSEBR_a4925 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379997|gb|AEA71347.1| Conserved hypothetical protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 159 Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 43/161 (26%), Positives = 75/161 (46%), Gaps = 15/161 (9%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP-EQQFSPL 63 +KIA+F D NLY + + A G +Y L + ++ AY Y GD +QQF + Sbjct: 2 KKIAVFADVQNLYYTVRQAYGCHFNYAALWADVSKQGQIVEAYAYAIDRGDSKQQQFQQI 61 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + ++ K DV + +D + ++ ++ +V+ SGDG Sbjct: 62 ------LRNLGFIVKLKPYIQRSDGS----AKGDWDVGITLDIMDAADHVDEVVLASGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F L L+R ++K + + P + ++ L R A ++ Sbjct: 112 DFDML---LERIIQKHGVQAVAYGVPGLTANSLIRAASRYV 149 >gi|70732718|ref|YP_262481.1| hypothetical protein PFL_5413 [Pseudomonas fluorescens Pf-5] gi|68347017|gb|AAY94623.1| conserved hypothetical protein [Pseudomonas fluorescens Pf-5] Length = 159 Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 43/161 (26%), Positives = 73/161 (45%), Gaps = 15/161 (9%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP-EQQFSPL 63 +KIA+F D NLY + + A G +Y L + ++ AY Y GD +QQF + Sbjct: 2 KKIAVFADVQNLYYTVRQAYGCHFNYAALWADISKQGQIVEAYAYAIDRGDSKQQQFQQI 61 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + ++ K DV + +D + + ++ +V+ SGDG Sbjct: 62 ------LRNLGFTVKLKPYIQRSDGS----AKGDWDVGITIDIMDAAAHVDEVVLASGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F L L+R + K + + P + ++ L R A ++ Sbjct: 112 DFDLL---LERIIHKHGVSAVAYGVPGLTANSLIRAATRYV 149 >gi|261253046|ref|ZP_05945619.1| hypothetical protein VIA_003071 [Vibrio orientalis CIP 102891] gi|260936437|gb|EEX92426.1| hypothetical protein VIA_003071 [Vibrio orientalis CIP 102891] Length = 160 Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 42/160 (26%), Positives = 72/160 (45%), Gaps = 13/160 (8%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 E +A+F+D N+Y +++ + DY + + +A Y DP+Q+ H Sbjct: 2 ETVAIFVDVQNIYYTTRDKYRANFDYNQFWYIATEGKQIEQANAYAISSHDPKQR--QFH 59 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 +L + GF V K + + K DV +A+D FE +E ++ +++ SGDG Sbjct: 60 HILRGI---GFNVNLKPFIQRMDGSA----KGDWDVGIALDVFEAAEKVDRVILLSGDGD 112 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F LV +Q K V V P + + L +D F+ Sbjct: 113 FEILVQRIQEKFNTKVDVYGV---PGLTAQSLIDASDRFI 149 >gi|313679213|ref|YP_004056952.1| hypothetical protein Ocepr_0319 [Oceanithermus profundus DSM 14977] gi|313151928|gb|ADR35779.1| protein of unknown function DUF88 [Oceanithermus profundus DSM 14977] Length = 173 Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 43/166 (25%), Positives = 81/166 (48%), Gaps = 12/166 (7%) Query: 6 EKIALFIDGANLY---ASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 E++A+FIDG+NLY S+ + +D+ K ++ + ++RAYYY + + Sbjct: 2 ERVAIFIDGSNLYKGLVSTLGSEYRLDFVKFIETLVAGRKLLRAYYYNAPLPTEDAASRA 61 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFS 120 L++L + V ++ + E G V+ +D+++AVD + + V+ S Sbjct: 62 HQSFLNYLKRVPY-VSVRLGR--LERRGDTFVEKGVDIQIAVDMLRLAYARAYDVGVLVS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 GDG F +V +Q +V + +++S +L +QAD F L Sbjct: 119 GDGDFAEVVRVIQDMGMQVENATF----HALSSYRLAQQADRFYPL 160 >gi|289548415|ref|YP_003473403.1| hypothetical protein Thal_0643 [Thermocrinis albus DSM 14484] gi|289182032|gb|ADC89276.1| protein of unknown function DUF88 [Thermocrinis albus DSM 14484] Length = 196 Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 13/144 (9%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGD-------PE- 57 E++ +FIDG+NL+ + + L IDY KL++ R ++RAY+Y V + PE Sbjct: 2 ERVVIFIDGSNLFHAIRYLNIKIDYSKLVEFLREDRKLVRAYFYGAVPQERDVKRNTPEW 61 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEH 115 + L+ L G +V ++ + ++ +D+ LA D + + Sbjct: 62 ESLLRQRRFLEELSLMGIKVKTAPLRKLPTG---EYLEKEVDIMLATDMLSMAYMNVYDT 118 Query: 116 LVIFSGDGCFTTLVAALQRKVKKV 139 ++ SGD F+ V +QR K+V Sbjct: 119 AILVSGDSDFSYTVEEVQRIGKRV 142 >gi|127512105|ref|YP_001093302.1| hypothetical protein Shew_1173 [Shewanella loihica PV-4] gi|126637400|gb|ABO23043.1| protein of unknown function DUF88 [Shewanella loihica PV-4] Length = 157 Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 43/160 (26%), Positives = 73/160 (45%), Gaps = 15/160 (9%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ-QFSPL 63 ++IALF+D N+Y + + A G +Y + + + ++ A Y GD Q +F Sbjct: 2 KRIALFVDVQNIYYTCRQAYGRQFNYHAMWQRLNEQGEIVTALAYAIDRGDDGQIKFQ-- 59 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 D L + GF+V K + ++ K DV + +D E + ++ +V+ SGDG Sbjct: 60 ----DALKHIGFEVKLKPYIQRSDGS----AKGDWDVGITIDIMEHAPEVDTVVLLSGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163 F L+ + RK T V V P +++ L A F Sbjct: 112 DFALLLEHIGRKYSLETEVYGV---PELSAKALMDAATQF 148 >gi|171315862|ref|ZP_02905092.1| protein of unknown function DUF88 [Burkholderia ambifaria MEX-5] gi|171098958|gb|EDT43746.1| protein of unknown function DUF88 [Burkholderia ambifaria MEX-5] Length = 131 Score = 48.1 bits (113), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 24/66 (36%), Positives = 41/66 (62%) Query: 70 LHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLV 129 L GF+V K + + + G + VKS+ D+ +A+DA +S+ L+ ++I + DG F +V Sbjct: 56 LRDKGFRVTIKPLRHYADEDGTETVKSNSDLGMAIDALSESDRLDTVLIATSDGDFVEVV 115 Query: 130 AALQRK 135 ALQ+K Sbjct: 116 RALQKK 121 >gi|328949646|ref|YP_004366981.1| Domain of unknown function DUF88 [Marinithermus hydrothermalis DSM 14884] gi|328449970|gb|AEB10871.1| Domain of unknown function DUF88 [Marinithermus hydrothermalis DSM 14884] Length = 174 Score = 48.1 bits (113), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 42/166 (25%), Positives = 83/166 (50%), Gaps = 12/166 (7%) Query: 6 EKIALFIDGANLY---ASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 ++IA+F+DG+NLY S+ + +D+ + +++ + ++RAYYY + + Sbjct: 2 DRIAIFMDGSNLYKGLVSTLGPDYRLDFVRFIESLVAGRKLLRAYYYNAPLPSEDPASKA 61 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFS 120 L++L + V ++ + E G V+ +D+++AVD + + V+ S Sbjct: 62 HQSFLNYLKRVPY-VAVRLGR--LERRGDTFVEKGVDIQIAVDMLRLAYARAYDVAVLVS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 GDG F +V +Q +V +T +++S +L +QAD F L Sbjct: 119 GDGDFAEVVRVVQDMGMQVE--NTTFQ--ALSSYRLAQQADRFYPL 160 >gi|330446321|ref|ZP_08309973.1| putative uncharacterized protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328490512|dbj|GAA04470.1| putative uncharacterized protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 159 Score = 48.1 bits (113), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 42/163 (25%), Positives = 71/163 (43%), Gaps = 15/163 (9%) Query: 6 EKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ-QFSPL 63 EK+A+F+D N+Y + + + DY +I AY Y GD +Q QF + Sbjct: 2 EKVAIFVDVQNIYYTVREKYHANFDYNAFWSEVSQDREIIAAYAYAIHKGDEKQRQFQNI 61 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + ++ K DV + +D E + ++ +++ SGDG Sbjct: 62 ------LRAIGFDVKLKPFIQRSDGSA----KGDWDVGITLDVIEHAPEVDRIILLSGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 F LV +Q K + V V P + + L A ++ ++ Sbjct: 112 DFDLLVEKVQTKYNAIVEVYGV---PGLTAASLINSATHYREI 151 >gi|330895533|gb|EGH27843.1| hypothetical protein PSYJA_01969 [Pseudomonas syringae pv. japonica str. M301072PT] gi|330938177|gb|EGH41874.1| hypothetical protein PSYPI_05358 [Pseudomonas syringae pv. pisi str. 1704B] gi|330961649|gb|EGH61909.1| hypothetical protein PMA4326_24166 [Pseudomonas syringae pv. maculicola str. ES4326] Length = 158 Score = 48.1 bits (113), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 15/163 (9%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP-EQQFSPL 63 +KIA+F D NLY + + A G +Y L R ++ A+ Y GD +QQF + Sbjct: 2 KKIAVFADVQNLYYTVRQAHGCHFNYAALWADISKRGEIVHAFAYAIDRGDSKQQQFQQI 61 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + ++ K DV + +D + + ++ +V+ SGDG Sbjct: 62 ------LRNLGFTVRLKPYIQRSDGS----AKGDWDVGITIDIMDFAPQVDEIVLASGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 F L L+R + K + + P + ++ L R A ++ + Sbjct: 112 DFDML---LERVISKHGVEAVAYGVPGLTANSLIRAASRYVPI 151 >gi|66047528|ref|YP_237369.1| hypothetical protein Psyr_4301 [Pseudomonas syringae pv. syringae B728a] gi|302184786|ref|ZP_07261459.1| hypothetical protein Psyrps6_00540 [Pseudomonas syringae pv. syringae 642] gi|63258235|gb|AAY39331.1| Protein of unknown function DUF88 [Pseudomonas syringae pv. syringae B728a] Length = 158 Score = 48.1 bits (113), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 15/163 (9%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP-EQQFSPL 63 +KIA+F D NLY + + A G +Y L R ++ A+ Y GD +QQF + Sbjct: 2 KKIAVFADVQNLYYTVRQAHGCHFNYAALWADISKRGEIVHAFAYAIDRGDSKQQQFQQI 61 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + ++ K DV + +D + + ++ +V+ SGDG Sbjct: 62 ------LRNLGFTVRLKPYIQRSDGS----AKGDWDVGITIDIMDFAPQVDEIVLASGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 F L L+R + K + + P + ++ L R A ++ + Sbjct: 112 DFDML---LERVISKHGVEAVAYGVPGLTANSLIRAASRYVPI 151 >gi|254507966|ref|ZP_05120094.1| conserved hypothetical protein [Vibrio parahaemolyticus 16] gi|219549074|gb|EED26071.1| conserved hypothetical protein [Vibrio parahaemolyticus 16] Length = 161 Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 36/131 (27%), Positives = 63/131 (48%), Gaps = 10/131 (7%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 EKIA+F+D N+Y +++ + DY + V+ A Y DP+Q+ H Sbjct: 2 EKIAIFVDVQNIYYTTRDKYRANFDYNEFWYLATEGKEVVEAKAYAIASTDPKQR--QFH 59 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 +L + GF V K + + K DV +A+D +E + ++ +++ SGDG Sbjct: 60 HILRGI---GFDVKLKPYIQRADGS----TKGDWDVGIALDVYEAANKVDRVILLSGDGD 112 Query: 125 FTTLVAALQRK 135 F LV +Q++ Sbjct: 113 FEILVERIQQR 123 >gi|332139998|ref|YP_004425736.1| hypothetical protein MADE_1002950 [Alteromonas macleodii str. 'Deep ecotype'] gi|327550020|gb|AEA96738.1| hypothetical protein MADE_1002950 [Alteromonas macleodii str. 'Deep ecotype'] Length = 156 Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 39/160 (24%), Positives = 74/160 (46%), Gaps = 14/160 (8%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 +K L +D N+Y + + A + +Y + + + A+ Y GD +Q+ Sbjct: 2 KKALLLVDVQNVYYTCRQAYKRNFNYNRFWRELSYNLDIEHAFAYAIDKGDSKQR----- 56 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 + L GF+V K + + K DV + VDA E + ++ +++ SGDG Sbjct: 57 EFQNILRAIGFEVKLKPFIQRADGSA----KGDWDVGITVDALEHASQVDEIILVSGDGD 112 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F LV AL+ K K VT+ P++ ++ +++ A ++ Sbjct: 113 FDILVNALKEKGKTVTVYGV----PALTAESIQKVATRYV 148 >gi|110834666|ref|YP_693525.1| hypothetical protein ABO_1805 [Alcanivorax borkumensis SK2] gi|110647777|emb|CAL17253.1| conserved hypothetical protein [Alcanivorax borkumensis SK2] Length = 160 Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 39/130 (30%), Positives = 62/130 (47%), Gaps = 12/130 (9%) Query: 1 MFDPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59 M+ PR IA+F D N+Y +++ A G +YR L + ++ ++ A Y T GD Q Sbjct: 1 MYMPR--IAVFADVQNIYYTTRQAFGRPFNYRALWQLLSAQGEIVHALAYATHRGDDGQT 58 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIF 119 D L + GF V K + ++ K DV +AVD + ++ +V+ Sbjct: 59 -----KFQDALKHIGFTVKLKPYIQRSDGSS----KGDWDVGIAVDVMTLAPEVDTVVLL 109 Query: 120 SGDGCFTTLV 129 SGDG F L+ Sbjct: 110 SGDGDFDVLL 119 >gi|237801480|ref|ZP_04589941.1| hypothetical protein POR16_21831 [Pseudomonas syringae pv. oryzae str. 1_6] gi|331024339|gb|EGI04396.1| hypothetical protein POR16_21831 [Pseudomonas syringae pv. oryzae str. 1_6] Length = 158 Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 43/163 (26%), Positives = 73/163 (44%), Gaps = 15/163 (9%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP-EQQFSPL 63 +KIA+F D NLY + + A G +Y L R ++ A+ Y GD +QQF + Sbjct: 2 KKIAVFADVQNLYYTVRQAHGCHFNYAALWADISKRGEIVHAFAYAIDRGDSKQQQFQQI 61 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + ++ K DV + +D + + ++ +V+ SGDG Sbjct: 62 ------LRNLGFTVRLKPYIQRSDGS----AKGDWDVGITIDIMDFAPQVDEVVLASGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 F L L R + K + + P + ++ L R A ++ + Sbjct: 112 DFDML---LDRVISKHGVAAVAYGVPGLTANSLIRAASRYVPI 151 >gi|71736408|ref|YP_276474.1| hypothetical protein PSPPH_4358 [Pseudomonas syringae pv. phaseolicola 1448A] gi|257482175|ref|ZP_05636216.1| hypothetical protein PsyrptA_02837 [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289675840|ref|ZP_06496730.1| hypothetical protein PsyrpsF_21381 [Pseudomonas syringae pv. syringae FF5] gi|298488862|ref|ZP_07006887.1| hypothetical protein PSA3335_4345 [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|71556961|gb|AAZ36172.1| uncharacterized conserved protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|298156615|gb|EFH97710.1| hypothetical protein PSA3335_4345 [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|320322652|gb|EFW78745.1| hypothetical protein PsgB076_22027 [Pseudomonas syringae pv. glycinea str. B076] gi|320330563|gb|EFW86542.1| hypothetical protein PsgRace4_08595 [Pseudomonas syringae pv. glycinea str. race 4] gi|330873569|gb|EGH07718.1| hypothetical protein Pgy4_04537 [Pseudomonas syringae pv. glycinea str. race 4] gi|330888791|gb|EGH21452.1| hypothetical protein PSYMO_08069 [Pseudomonas syringae pv. mori str. 301020] gi|330987664|gb|EGH85767.1| hypothetical protein PLA107_21753 [Pseudomonas syringae pv. lachrymans str. M301315] gi|331011359|gb|EGH91415.1| hypothetical protein PSYTB_17135 [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 158 Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 15/163 (9%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP-EQQFSPL 63 +KIA+F D NLY + + A G +Y L R ++ A+ Y GD +QQF + Sbjct: 2 KKIAVFADVQNLYYTVRQAHGCHFNYAALWADISKRGEIVHAFAYAIDRGDSKQQQFQQI 61 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + ++ K DV + +D + + ++ +V+ SGDG Sbjct: 62 ------LRNLGFTVRLKPYIQRSDGS----AKGDWDVGITIDIMDFAPQVDEVVLASGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 F L L+R + K + + P + ++ L R A ++ + Sbjct: 112 DFDML---LERVISKHGVEAVAYGVPGLTANSLIRAASRYVPI 151 >gi|89072963|ref|ZP_01159510.1| hypothetical protein SKA34_12125 [Photobacterium sp. SKA34] gi|90578998|ref|ZP_01234808.1| hypothetical protein VAS14_04813 [Vibrio angustum S14] gi|89051181|gb|EAR56637.1| hypothetical protein SKA34_12125 [Photobacterium sp. SKA34] gi|90439831|gb|EAS65012.1| hypothetical protein VAS14_04813 [Vibrio angustum S14] Length = 159 Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 43/163 (26%), Positives = 71/163 (43%), Gaps = 15/163 (9%) Query: 6 EKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ-QFSPL 63 EK+A+F+D N+Y + K + DY +I AY Y GD +Q QF + Sbjct: 2 EKVAIFVDVQNIYYTVKEKYRANFDYNAFWAEVSQDREIIAAYAYAIHKGDEKQRQFQNI 61 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF+V K + ++ K DV + +D E ++ + +++ SGDG Sbjct: 62 ------LRAIGFEVKLKPFIQRSDGSA----KGDWDVGITLDVIEHAQDADRIILLSGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 F LV +Q K V V P + + L A ++ ++ Sbjct: 112 DFDLLVDKVQTKYNTKVEVYGV---PGLTATSLINTATHYREI 151 >gi|289627587|ref|ZP_06460541.1| hypothetical protein PsyrpaN_21062 [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289649838|ref|ZP_06481181.1| hypothetical protein Psyrpa2_19118 [Pseudomonas syringae pv. aesculi str. 2250] gi|330870428|gb|EGH05137.1| hypothetical protein PSYAE_24882 [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 158 Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 15/163 (9%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP-EQQFSPL 63 +KIA+F D NLY + + A G +Y L R ++ A+ Y GD +QQF + Sbjct: 2 KKIAVFADVQNLYYTVRQAHGCHFNYAALWADISKRGEIVHAFAYAIDRGDSKQQQFQQI 61 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + ++ K DV + +D + + ++ +V+ SGDG Sbjct: 62 ------LRNLGFTVRLKPYIQRSDGSA----KGDWDVGITIDIMDFAPQVDEVVLASGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 F L L+R + K + + P + ++ L R A ++ + Sbjct: 112 DFDML---LERVISKHDVEAVAYGVPGLTANSLIRAASRYVPI 151 >gi|291295060|ref|YP_003506458.1| hypothetical protein Mrub_0671 [Meiothermus ruber DSM 1279] gi|290470019|gb|ADD27438.1| protein of unknown function DUF88 [Meiothermus ruber DSM 1279] Length = 192 Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 44/173 (25%), Positives = 84/173 (48%), Gaps = 12/173 (6%) Query: 2 FDPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 + P++++ LF+D NLY S++ G ++++ L++ + ++RA Y V + E Sbjct: 11 WSPQQRVGLFVDTQNLYHSARDYYGQNVNFESLMRYAVANRQLVRATAY---VVEREHDT 67 Query: 61 SPLHPLLDWLHYNGFQV--VAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVI 118 S P + L GF+V + KE T+ G+ + + D+ +A D L+ +V+ Sbjct: 68 SAW-PFIYKLSTIGFRVRRMNLTLKETTDE-GKPIYEGNWDMGIAADMVRLMHTLDVVVL 125 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 SGDG F +V L + +V +++ S +L D F+ L ++N Sbjct: 126 GSGDGDFVDIVEVLMERGIRVEVIAF----KETTSQKLIDAVDRFIHLPEIEN 174 >gi|119776250|ref|YP_928990.1| hypothetical protein Sama_3118 [Shewanella amazonensis SB2B] gi|119768750|gb|ABM01321.1| conserved hypothetical protein [Shewanella amazonensis SB2B] Length = 157 Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 41/159 (25%), Positives = 72/159 (45%), Gaps = 13/159 (8%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 +KIALF+D N+Y + + A +YRKL + S ++ A Y D Q Sbjct: 2 KKIALFVDVQNIYYTCREAYQRQFNYRKLWQQLCSEGEIVSATAYAIHRSDDGQL----- 56 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 D L + GF++ K + ++ K DV + +D E + ++ +++ SGDG Sbjct: 57 KFQDALRHIGFELKLKPFIQRSDGSA----KGDWDVGITIDVLETAPEVDTVILLSGDGD 112 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163 F L+ ++ +K + + V PS+ + L A F Sbjct: 113 FALLLDKIR---QKYAVEAEVYGVPSLTAKSLMEAASRF 148 >gi|24374996|ref|NP_719039.1| hypothetical protein SO_3490 [Shewanella oneidensis MR-1] gi|24349728|gb|AAN56483.1|AE015785_6 conserved hypothetical protein [Shewanella oneidensis MR-1] Length = 157 Score = 47.4 bits (111), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 38/152 (25%), Positives = 70/152 (46%), Gaps = 13/152 (8%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 KIALF+D N+Y + + A +YRKL + ++ ++ A Y GD Q Sbjct: 2 NKIALFVDVQNIYYTCREAYQRQFNYRKLWQHLSTQGEIVSAVAYAIHRGDDGQL----- 56 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 D L + GF++ K + ++ K DV + +D + + ++ +++ SGDG Sbjct: 57 KFQDALRHIGFELKLKPFIQRSDGSA----KGDWDVGITIDVLDAAPNVDTVILLSGDGD 112 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156 F L L++ +K + + V P + + L Sbjct: 113 FAIL---LEKITQKYGVKAEVYGVPQLTAKAL 141 >gi|15806586|ref|NP_295301.1| hypothetical protein DR_1578 [Deinococcus radiodurans R1] gi|6459341|gb|AAF11139.1|AE002001_5 conserved hypothetical protein [Deinococcus radiodurans R1] Length = 185 Score = 47.4 bits (111), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 35/141 (24%), Positives = 68/141 (48%), Gaps = 6/141 (4%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 R ++ +FID NLY S++ L +++ +L+ ++ A YT + + Sbjct: 7 RPRVGVFIDTQNLYHSARDLLERTVNFETILQVATEGRELVHAISYTV----EREGEATS 62 Query: 64 HPLLDWLHYNGFQVV-AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122 P + L GF+V + + G+ + + D+ + D F + L+ +V+ SGD Sbjct: 63 RPFIYKLSTLGFKVRRMNLTLHHVTDGGKPIYEGNWDMGIVADMFRLMDHLDVIVLGSGD 122 Query: 123 GCFTTLVAALQRKVKKVTIVS 143 G FT +V LQ + K+V +++ Sbjct: 123 GDFTDIVEVLQERGKRVEVIA 143 >gi|170725723|ref|YP_001759749.1| hypothetical protein Swoo_1362 [Shewanella woodyi ATCC 51908] gi|169811070|gb|ACA85654.1| protein of unknown function DUF88 [Shewanella woodyi ATCC 51908] Length = 157 Score = 47.4 bits (111), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 42/152 (27%), Positives = 67/152 (44%), Gaps = 13/152 (8%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 +KIALF+D N+Y + + A G +YRKL + ++ A Y GD Q Sbjct: 2 KKIALFVDVQNIYYTCRQAHGRQFNYRKLWQHISHEGEIVSATAYAIHKGDDGQL----- 56 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 D L + GF V K F + K DV + +D E + ++ +++ SGDG Sbjct: 57 KFQDALKHIGFDV---KLKPFIQRA-DGSAKGDWDVGITIDIMEAASEVDSIILLSGDGD 112 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156 F L+ + +K I + V P + + L Sbjct: 113 FDLLMLKI---YQKYGIETQVYGVPGLTAKSL 141 >gi|260778792|ref|ZP_05887684.1| hypothetical protein VIC_004198 [Vibrio coralliilyticus ATCC BAA-450] gi|260604956|gb|EEX31251.1| hypothetical protein VIC_004198 [Vibrio coralliilyticus ATCC BAA-450] Length = 160 Score = 47.4 bits (111), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 13/160 (8%) Query: 6 EKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 EK+A+F+D N+Y +++ + DY + V A+ Y DP+Q+ H Sbjct: 2 EKVAIFVDVQNIYYTTREKYRANFDYNEFWYVATEGRDVTEAHAYAIASHDPKQR--QFH 59 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 +L + GF V K + + K DV +A+D +E + ++ +++ SGDG Sbjct: 60 HILRGI---GFNVKLKPFIQRQDGSA----KGDWDVGIALDVYEAASKVDRVILLSGDGD 112 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F LV +Q + V V P +++ L D F+ Sbjct: 113 FDVLVKRVQERFGTKVDVFGV---PGLSAQSLIDVCDKFI 149 >gi|239996208|ref|ZP_04716732.1| hypothetical protein AmacA2_17270 [Alteromonas macleodii ATCC 27126] Length = 153 Score = 47.4 bits (111), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 38/160 (23%), Positives = 74/160 (46%), Gaps = 14/160 (8%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 K + +D N+Y + + A + +Y + + + A+ Y GD +Q+ Sbjct: 2 NKALVLVDVQNVYYTCRQAYKRNFNYNQFWRELTYNLDIAHAFAYAIDRGDSKQR----- 56 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 + L GF+V K + + K DV + VDA E ++ ++ +++ SGDG Sbjct: 57 EFQNILRAIGFEVKLKPFIQRADGSA----KGDWDVGITVDALEHADDVDEIILVSGDGD 112 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F LV AL+ K K VT+ P++ ++ +++ A ++ Sbjct: 113 FDILVNALKAKGKTVTVYGV----PALTAESIQKVASKYV 148 >gi|28871798|ref|NP_794417.1| hypothetical protein PSPTO_4666 [Pseudomonas syringae pv. tomato str. DC3000] gi|28855050|gb|AAO58112.1| conserved protein of unknown function [Pseudomonas syringae pv. tomato str. DC3000] Length = 158 Score = 47.4 bits (111), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 43/163 (26%), Positives = 73/163 (44%), Gaps = 15/163 (9%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP-EQQFSPL 63 +KIA+F D NLY + + A G +Y L R ++ A+ Y GD +QQF + Sbjct: 2 KKIAVFADVQNLYYTVRQAYGCHFNYAALWADISKRGEIVHAFAYAIDRGDSKQQQFQQI 61 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + ++ K DV + +D + + ++ +V+ SGDG Sbjct: 62 ------LRNLGFTVRLKPYIQRSDGS----AKGEWDVGITIDIMDFAPQVDEVVLASGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 F L L R + K + + P + ++ L R A ++ + Sbjct: 112 DFDML---LDRVISKHGVEAVAYGVPGLTANSLIRAASRYVPI 151 >gi|119476672|ref|ZP_01616982.1| hypothetical protein GP2143_03548 [marine gamma proteobacterium HTCC2143] gi|119449928|gb|EAW31164.1| hypothetical protein GP2143_03548 [marine gamma proteobacterium HTCC2143] Length = 158 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 39/130 (30%), Positives = 65/130 (50%), Gaps = 12/130 (9%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKL-LKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 EK+A+F+D N+Y +++ + DY K LKA SR V++A Y T GD +Q Sbjct: 2 EKVAIFVDVQNVYYTTRQTFRKNFDYNKFWLKACSSRE-VVKAIAYATDRGDQKQ----- 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 H + L GF+V K + ++ K DV + +D E ++ + +++ SGDG Sbjct: 56 HEFQNILRAIGFEVKLKPFIQRSDGSA----KGDWDVGITIDIMECADDVAVVILVSGDG 111 Query: 124 CFTTLVAALQ 133 F L ++ Sbjct: 112 DFDLLAQKIR 121 >gi|213966787|ref|ZP_03394938.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1] gi|301383296|ref|ZP_07231714.1| hypothetical protein PsyrptM_11692 [Pseudomonas syringae pv. tomato Max13] gi|302062465|ref|ZP_07254006.1| hypothetical protein PsyrptK_20968 [Pseudomonas syringae pv. tomato K40] gi|302133447|ref|ZP_07259437.1| hypothetical protein PsyrptN_18744 [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213928637|gb|EEB62181.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1] gi|330873520|gb|EGH07669.1| hypothetical protein PSYMP_03990 [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330967689|gb|EGH67949.1| hypothetical protein PSYAC_24213 [Pseudomonas syringae pv. actinidiae str. M302091] gi|331018942|gb|EGH98998.1| hypothetical protein PLA106_23133 [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 158 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 43/163 (26%), Positives = 73/163 (44%), Gaps = 15/163 (9%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP-EQQFSPL 63 +KIA+F D NLY + + A G +Y L R ++ A+ Y GD +QQF + Sbjct: 2 KKIAVFADVQNLYYTVRQAYGCHFNYAALWADISKRGEIVHAFAYAIDRGDSKQQQFQQI 61 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + ++ K DV + +D + + ++ +V+ SGDG Sbjct: 62 ------LRNLGFTVRLKPYIQRSDGS----AKGDWDVGITIDIMDFAPQVDEVVLASGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 F L L R + K + + P + ++ L R A ++ + Sbjct: 112 DFDML---LDRVISKHGVEAVAYGVPGLTANSLIRAASRYVPI 151 >gi|294139934|ref|YP_003555912.1| hypothetical protein SVI_1163 [Shewanella violacea DSS12] gi|293326403|dbj|BAJ01134.1| conserved hypothetical protein [Shewanella violacea DSS12] Length = 159 Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust. Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 10/133 (7%) Query: 4 PREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 +KIA+F+D N+Y + + A G +YRKL + ++ A Y GD Q Sbjct: 2 TNKKIAIFVDVQNIYYTCRQAYGRQFNYRKLWQHIIHEGDIVSATAYAIHKGDDGQL--- 58 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122 D L + GF + K + ++ K DV +A+D E + ++ +++ SGD Sbjct: 59 --KFQDALKHIGFDIKLKPFIQRSDGSA----KGDWDVGIAIDVMEAATEVDTIILLSGD 112 Query: 123 GCFTTLVAALQRK 135 G F L+ + +K Sbjct: 113 GDFDLLMLKVYQK 125 >gi|148977299|ref|ZP_01813913.1| hypothetical protein VSWAT3_11922 [Vibrionales bacterium SWAT-3] gi|145963412|gb|EDK28676.1| hypothetical protein VSWAT3_11922 [Vibrionales bacterium SWAT-3] Length = 157 Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust. Identities = 45/161 (27%), Positives = 73/161 (45%), Gaps = 15/161 (9%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 E IA+ +D N+Y +++ + DY + V+ A+ Y DP+Q+ H Sbjct: 2 ENIAILVDVQNVYYTTRDKYRSNFDYNQFWYVATEGRNVVAAHAYAISSQDPKQR--QFH 59 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 +L + GF V K + + K DV +A+DA E +E ++ +V+ SGDG Sbjct: 60 HILRGV---GFDVKLKPFIQRRDGSA----KGDWDVGIALDAIELAENVDTIVLVSGDGD 112 Query: 125 FTTLVAAL-QRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F LV + QR KKV + P + + L A F+ Sbjct: 113 FEILVERIKQRFGKKVEVYGV----PGLTAQNLIDSASKFV 149 >gi|157374400|ref|YP_001473000.1| hypothetical protein Ssed_1261 [Shewanella sediminis HAW-EB3] gi|157316774|gb|ABV35872.1| protein of unknown function DUF88 [Shewanella sediminis HAW-EB3] Length = 159 Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust. Identities = 40/152 (26%), Positives = 68/152 (44%), Gaps = 13/152 (8%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 +KIA+F+D N+Y + + A G +YRKL + + A Y GD Q Sbjct: 4 KKIAIFVDVQNIYYTCRQAYGRQFNYRKLWQHINHEGEISSATAYAIHRGDDGQL----- 58 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 D L + GF V K + ++ K DV + +D E + ++ +++ SGDG Sbjct: 59 KFQDALKHIGFDVKLKPFIQRSDG----SAKGDWDVGITIDIMEAASEVDSIILLSGDGD 114 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156 F L+ + + K I + V P++ + L Sbjct: 115 FGLLMLKIHQ---KYGIDTQVYGVPTLTAKSL 143 >gi|297622586|ref|YP_003704020.1| hypothetical protein Trad_0338 [Truepera radiovictrix DSM 17093] gi|297163766|gb|ADI13477.1| protein of unknown function DUF88 [Truepera radiovictrix DSM 17093] Length = 198 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 46/167 (27%), Positives = 82/167 (49%), Gaps = 12/167 (7%) Query: 4 PREKIALFIDGANLYASSKAL-GFDIDYRKLLK-AFRSRAIVIRAYYYTTVVGDPEQQFS 61 P +++ LF+D NLY +++ + +DY +LK + RSR +V Y G+ + Sbjct: 34 PEQRVGLFVDTQNLYYAARDIYSRHVDYAVMLKLSERSRHLVHATAYVVEREGE-----A 88 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEF-TENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 + + L G++V + + ++ GR ++ D+ +A D + L+ +V+ S Sbjct: 89 TAYGFVTKLSALGYRVRRRKVRVHRADSGGRPVLEGDWDMGIAADIVRAWDYLDVIVLAS 148 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 GDG F ++ Q++ K+V VL+ AS L AD FM LA Sbjct: 149 GDGDFAPMLELAQQRGKRV----EVLAFREAASQNLLDLADAFMGLA 191 >gi|54308491|ref|YP_129511.1| hypothetical protein PBPRA1298 [Photobacterium profundum SS9] gi|46912920|emb|CAG19709.1| conserved hypothetical protein [Photobacterium profundum SS9] Length = 159 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 43/163 (26%), Positives = 71/163 (43%), Gaps = 15/163 (9%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ-QFSPL 63 EK+A+F+D N+Y + K + DY V+ AY Y GD +Q QF + Sbjct: 2 EKVAIFVDVQNIYYTVKDKYKCNFDYNAFWAEATQGREVVAAYAYAIHRGDEKQGQFQNI 61 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF+V K + ++ K DV + +D E + ++ +++ SGDG Sbjct: 62 ------LRGIGFEVKLKPFIQRSDGS----AKGDWDVGITLDVIEHAADVDRVILLSGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 F LV +Q K + V P + + L A Y+ ++ Sbjct: 112 DFDLLVDKVQ---TKYGVDVEVYGVPGLTATSLINTAHYYREI 151 >gi|90414813|ref|ZP_01222781.1| hypothetical protein P3TCK_17379 [Photobacterium profundum 3TCK] gi|90324118|gb|EAS40703.1| hypothetical protein P3TCK_17379 [Photobacterium profundum 3TCK] Length = 159 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 43/163 (26%), Positives = 71/163 (43%), Gaps = 15/163 (9%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ-QFSPL 63 EK+A+F+D N+Y + K + DY V+ AY Y GD +Q QF + Sbjct: 2 EKVAIFVDVQNIYYTVKDKYKCNFDYNAFWAEATQGREVVAAYAYAIHRGDEKQGQFQNI 61 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF+V K + ++ K DV + +D E + ++ +++ SGDG Sbjct: 62 ------LRGIGFEVKLKPFIQRSDGS----AKGDWDVGITLDVIEHAGDVDRVILLSGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 F LV +Q K + V P + + L A Y+ ++ Sbjct: 112 DFDLLVDKVQ---TKYGVDVEVYGVPGLTATSLINTAHYYREI 151 >gi|88796999|ref|ZP_01112589.1| hypothetical protein MED297_19237 [Reinekea sp. MED297] gi|88779868|gb|EAR11053.1| hypothetical protein MED297_19237 [Reinekea sp. MED297] Length = 159 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 41/159 (25%), Positives = 72/159 (45%), Gaps = 15/159 (9%) Query: 8 IALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ-QFSPLHP 65 +A+ +D N+Y +++ A + DY + + ++ A Y GD +Q QF + Sbjct: 4 VAILVDVQNVYYTTRHAFRRNFDYNRFWAQVSEQGTIVLANAYAVDRGDEKQKQFQNI-- 61 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125 L GF V K + + K DV + +DA + ++ + +V+ +GDG F Sbjct: 62 ----LRAIGFNVKLKPFIQRADGSA----KGDWDVGITIDALDAAQLADTVVLVTGDGDF 113 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 T LV L+ + + V V PS+ + L AD F+ Sbjct: 114 TILVDKLRNDLDRRVEVYGV---PSLTAKSLMDAADAFI 149 >gi|212634169|ref|YP_002310694.1| hypothetical protein swp_1319 [Shewanella piezotolerans WP3] gi|212555653|gb|ACJ28107.1| Conserved hypothetical protein [Shewanella piezotolerans WP3] Length = 157 Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust. Identities = 43/162 (26%), Positives = 71/162 (43%), Gaps = 13/162 (8%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 +KIALF+D N+Y + + A G +YRKL + + A Y GD Q Sbjct: 2 KKIALFVDVQNIYYTCRQAYGRQFNYRKLWQHLGYEGEITSATAYAIHRGDDGQL----- 56 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 D L + GF V K + ++ K DV + +D E + ++ +++ SGDG Sbjct: 57 KFQDALKHIGFDVKLKPFIQRSDG----SAKGDWDVGITIDIMEAASEVDCVILLSGDGD 112 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 F L+ + +K T V V P + + L A + ++ Sbjct: 113 FDLLMLKIYQKYGVETQVYGV---PGLTAKSLIDSASQYHEI 151 >gi|294495612|ref|YP_003542105.1| hypothetical protein Mmah_0940 [Methanohalophilus mahii DSM 5219] gi|292666611|gb|ADE36460.1| protein of unknown function DUF88 [Methanohalophilus mahii DSM 5219] Length = 161 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 34/129 (26%), Positives = 64/129 (49%), Gaps = 10/129 (7%) Query: 6 EKIALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 +K+A+F+D N++ S++ + + +DY KLL+A + RA Y D +Q Sbjct: 5 QKLAVFVDVQNMFYSARNIHYGRLDYEKLLRAVVMERKLTRAIAYLVETPDIDQS----- 59 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 ++ G++V +K K + K D+ +A+DA + ++ +V+ SGDG Sbjct: 60 GFKSFIGSIGWEVKSKALKVRPDGS----TKGDWDMGIAIDAISIAPKVDTIVLVSGDGD 115 Query: 125 FTTLVAALQ 133 F L+ L+ Sbjct: 116 FVDLINHLK 124 >gi|269925423|ref|YP_003322046.1| protein of unknown function DUF88 [Thermobaculum terrenum ATCC BAA-798] gi|269789083|gb|ACZ41224.1| protein of unknown function DUF88 [Thermobaculum terrenum ATCC BAA-798] Length = 408 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 52/183 (28%), Positives = 81/183 (44%), Gaps = 26/183 (14%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRS---RAIVIRAYYYTTVVGDPEQQFSPLH 64 +AL+ID N+ S + LK S R +V RAY + + Q P Sbjct: 20 VALYIDWENIKYSLWNKDSRVPNATALKEAASKFGRVVVARAY---ANWQEHQHQLDP-- 74 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRK---RVKSSMDVELAVDAFE---QSEGLEHLVI 118 + L+ G + + + +T K R K+S+DV+L VDA + + + V+ Sbjct: 75 ---NDLYSAGIEPIYVPTRTYTSTDAVKTNNRRKNSVDVKLTVDAVDFCLSNPNIHTFVL 131 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178 +GDG F LV AL+ + ++V ++ S S QL ADYF+ +I DP Sbjct: 132 VTGDGDFIHLVNALRSRGREVVVIGCSWS----TSWQLTSMADYFIPY-----DIEVDPI 182 Query: 179 EDK 181 DK Sbjct: 183 YDK 185 >gi|86146656|ref|ZP_01064977.1| hypothetical protein MED222_07105 [Vibrio sp. MED222] gi|218676438|ref|YP_002395257.1| hypothetical protein VS_II0673 [Vibrio splendidus LGP32] gi|85835503|gb|EAQ53640.1| hypothetical protein MED222_07105 [Vibrio sp. MED222] gi|218324706|emb|CAV26328.1| Conserved hypothetical protein [Vibrio splendidus LGP32] Length = 157 Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust. Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 13/162 (8%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 E IA+ +D N+Y +++ + DY + V+ A Y DP+Q+ H Sbjct: 2 ENIAILVDVQNVYYTTRDKYRSNFDYNQFWYVATEGRNVVEANAYAISSQDPKQR--QFH 59 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 +L + GF V K + + K DV +A+DA E +E ++ +V+ SGDG Sbjct: 60 HILRGV---GFNVKLKPFIQRRDGSA----KGDWDVGIALDAIELAETVDTIVLVSGDGD 112 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 F LV ++ + K V V P + + L A F+ + Sbjct: 113 FEILVERIKERFGKPVEVYGV---PGLTAQNLIDSASKFVPI 151 >gi|87121768|ref|ZP_01077655.1| hypothetical protein MED121_19509 [Marinomonas sp. MED121] gi|86163019|gb|EAQ64297.1| hypothetical protein MED121_19509 [Marinomonas sp. MED121] Length = 163 Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust. Identities = 37/137 (27%), Positives = 64/137 (46%), Gaps = 12/137 (8%) Query: 1 MFDPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ- 58 + D KIA+F+D N+Y +S+ +Y+K ++ +++AY Y GD +Q Sbjct: 3 VIDSAPKIAIFVDVQNIYYTSRHTFARHFNYQKFWDEIAAQGEIVQAYAYAIDKGDSKQA 62 Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVI 118 QF + L GF+V K + + K DV + +D + ++ +V+ Sbjct: 63 QFQQI------LRGIGFEVKLKPFIQRRDGSA----KGDWDVGITIDVLAAAPDVDIIVL 112 Query: 119 FSGDGCFTTLVAALQRK 135 SGDG F L+ A + K Sbjct: 113 ASGDGDFALLLDAARTK 129 >gi|108802863|ref|YP_642800.1| hypothetical protein Rxyl_0007 [Rubrobacter xylanophilus DSM 9941] gi|108764106|gb|ABG02988.1| protein of unknown function DUF88 [Rubrobacter xylanophilus DSM 9941] Length = 487 Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust. Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 14/168 (8%) Query: 6 EKIALFIDGANLYASS-KALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 E +A+FID N+Y S+ G + +L+ R ++ A Y + +F Sbjct: 102 EDLAIFIDWENIYISTVSEYGAKPNVSAILEKAREYGRIVSATAYADWT---DGEFRDAP 158 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELA---VDAFEQSEGLEHLVIFSG 121 P L+ NG A+ F +KR +S+DV LA VD ++ V+ +G Sbjct: 159 PT---LYSNGISPRYISARYFPGGKSQKRRTNSIDVMLAVECVDFLHNHPQVDTYVLVTG 215 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 DG F LV L+ + K V ++ S L AD+F+ A L Sbjct: 216 DGDFIPLVNLLRSRGKVVVVIGVS----EATSYHLIESADHFISYASL 259 >gi|196234013|ref|ZP_03132849.1| protein of unknown function DUF88 [Chthoniobacter flavus Ellin428] gi|196221952|gb|EDY16486.1| protein of unknown function DUF88 [Chthoniobacter flavus Ellin428] Length = 180 Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust. Identities = 41/171 (23%), Positives = 76/171 (44%), Gaps = 13/171 (7%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAF-RSRAIVIRAYYYTTVVGDPEQQFS- 61 P+ ++ + +D +N+ +++K +D+ KL R ++ Y PE Q Sbjct: 10 PQRRVLILVDESNVTSAAKVTNRKLDWLKLRDHLVNGRELLEMVVYVGLPPAMPEWQAER 69 Query: 62 -PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEH--LVI 118 + + WL NGF VV+K E+ K+++DV +A+D E S ++ +++ Sbjct: 70 DKKNKFVFWLRSNGFLVVSKDGSPADES----HYKANVDVLMAIDGVELSTEMQPDVVIL 125 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 +GD F L L+R+ +V S L+ A+ +DL L Sbjct: 126 VTGDADFAELALRLRRRGIRVEAASVA----HTLGAGLKTSANGIIDLGPL 172 >gi|84393278|ref|ZP_00992039.1| hypothetical protein V12B01_14530 [Vibrio splendidus 12B01] gi|84376103|gb|EAP92990.1| hypothetical protein V12B01_14530 [Vibrio splendidus 12B01] Length = 157 Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust. Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 13/162 (8%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 E IA+ +D N+Y +++ + DY + V+ A Y DP+Q+ H Sbjct: 2 ENIAILVDVQNVYYTTRDKYRSNFDYNQFWYVATEGRNVVAANAYAISSQDPKQR--QFH 59 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 +L + GF V K + + K DV +A+DA E +E ++ +V+ SGDG Sbjct: 60 HILRGV---GFNVKLKPFIQRRDGSA----KGDWDVGIALDAIELAETVDTIVLVSGDGD 112 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 F LV ++ + K V V P + + L A F+ + Sbjct: 113 FEILVERIKERFGKPVEVYGV---PGLTAQNLIDSASKFVPI 151 >gi|91201953|emb|CAJ75013.1| conserved hypothetical protein [Candidatus Kuenenia stuttgartiensis] Length = 177 Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust. Identities = 39/139 (28%), Positives = 64/139 (46%), Gaps = 10/139 (7%) Query: 6 EKIALFIDGANLYASSKAL-GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 ++I +F+D N++ S+KAL IDY KLL ++RA Y D +Q Sbjct: 11 QRIGVFVDVQNMFYSAKALHQSKIDYSKLLLEIVGGRNLVRAIAYIVQKPDVDQS----- 65 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 D L G+++ K + + K D+ +A+D + L+ +V+ +GDG Sbjct: 66 SFTDALCRLGYEIKTKDLRLRPDGTA----KGDWDMGIAIDTISIASKLDTVVLVTGDGD 121 Query: 125 FTTLVAALQRKVKKVTIVS 143 F LV L+ +V VS Sbjct: 122 FVPLVELLKYHGCRVETVS 140 >gi|152994925|ref|YP_001339760.1| hypothetical protein Mmwyl1_0893 [Marinomonas sp. MWYL1] gi|150835849|gb|ABR69825.1| protein of unknown function DUF88 [Marinomonas sp. MWYL1] Length = 158 Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust. Identities = 43/163 (26%), Positives = 69/163 (42%), Gaps = 15/163 (9%) Query: 7 KIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ-QFSPLH 64 + + +D N+Y +++ A G DY + V++A Y GD +Q QF + Sbjct: 3 NVTILVDVQNVYYTTRQAFGRSFDYNTFWQQATEGRNVVKAIAYAIDRGDEKQRQFQNI- 61 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 L GF+V K + ++ K DV +A+D E + + LV+ SGDG Sbjct: 62 -----LRAIGFEVKLKPFIQRSDGS----AKGDWDVGIAIDGIEHGKDSDVLVLLSGDGD 112 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F L L+ K + V V S+ + L AD F + Sbjct: 113 FDILAKTLREKYQTRVEVYGV---ESLTAQSLINAADSFTAIG 152 >gi|26991450|ref|NP_746875.1| hypothetical protein PP_4769 [Pseudomonas putida KT2440] gi|148549846|ref|YP_001269948.1| hypothetical protein Pput_4644 [Pseudomonas putida F1] gi|24986525|gb|AAN70339.1|AE016675_9 conserved hypothetical protein [Pseudomonas putida KT2440] gi|148513904|gb|ABQ80764.1| protein of unknown function DUF88 [Pseudomonas putida F1] Length = 159 Score = 43.9 bits (102), Expect = 0.010, Method: Compositional matrix adjust. Identities = 43/161 (26%), Positives = 72/161 (44%), Gaps = 15/161 (9%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP-EQQFSPL 63 +KIALF D NLY + + A G +Y L ++ A Y GD +QQF + Sbjct: 2 KKIALFADVQNLYYTVRQAHGCHFNYTALWADVSREGQIVEAVAYAIDRGDSKQQQFQQI 61 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF+V K + ++ K DV + +D + + ++ +V+ SGDG Sbjct: 62 ------LRNLGFEVRLKPFIQRSDGSA----KGDWDVGITLDVIDAASRVDQVVLASGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F L L+R +++ + V P + + L R A ++ Sbjct: 112 DFDLL---LERVIQRHGTEAVVYGVPGLTALSLIRAATRYV 149 >gi|170719838|ref|YP_001747526.1| hypothetical protein PputW619_0652 [Pseudomonas putida W619] gi|169757841|gb|ACA71157.1| protein of unknown function DUF88 [Pseudomonas putida W619] Length = 159 Score = 43.9 bits (102), Expect = 0.010, Method: Compositional matrix adjust. Identities = 43/161 (26%), Positives = 71/161 (44%), Gaps = 15/161 (9%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP-EQQFSPL 63 +KIALF D NLY + + A G +Y L ++ A Y GD +QQF + Sbjct: 2 KKIALFADVQNLYYTVRQAHGCHFNYTALWSEVSREGEIVEAVAYAIDRGDSKQQQFQQI 61 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + ++ K DV + +D + + ++ +V+ SGDG Sbjct: 62 ------LRNLGFDVRLKPFIQRSDGSA----KGDWDVGITLDVIDAASRVDQVVLASGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F L L+R +++ + V P + + L R A ++ Sbjct: 112 DFDLL---LERVIQRHGAEAVVYGVPGLTAMSLIRAASRYV 149 >gi|297566075|ref|YP_003685047.1| hypothetical protein Mesil_1654 [Meiothermus silvanus DSM 9946] gi|296850524|gb|ADH63539.1| protein of unknown function DUF88 [Meiothermus silvanus DSM 9946] Length = 195 Score = 43.5 bits (101), Expect = 0.012, Method: Compositional matrix adjust. Identities = 38/146 (26%), Positives = 70/146 (47%), Gaps = 10/146 (6%) Query: 2 FDPREKIALFIDGANLYASSK-ALGFDIDYRKLLK-AFRSRAIVIRAYYYTTVVGDPEQQ 59 + P +++ LF+D NLY S++ ++++ LLK A R +V Y GD Sbjct: 14 YSPMQRVGLFVDTQNLYHSARDYYEKNVNFESLLKHAVSGRQLVRATAYVVEREGD---- 69 Query: 60 FSPLHPLLDWLHYNGFQV--VAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLV 117 + P + L G++V + KE T+ G+ + + D+ +A D L+ +V Sbjct: 70 -TSAWPFIYKLSTIGYRVRRMNLTLKETTDE-GKPIYEGNWDMGIAADMVRLMHTLDVVV 127 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVS 143 + SGDG F ++ L + +V +V+ Sbjct: 128 LGSGDGDFVDIIEVLMERGIRVEVVA 153 >gi|226356465|ref|YP_002786205.1| hypothetical protein Deide_14960 [Deinococcus deserti VCD115] gi|226318455|gb|ACO46451.1| conserved hypothetical protein [Deinococcus deserti VCD115] Length = 193 Score = 43.5 bits (101), Expect = 0.012, Method: Compositional matrix adjust. Identities = 39/171 (22%), Positives = 77/171 (45%), Gaps = 10/171 (5%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 R ++ LF+D NLY S++ L +++ +L ++ A YT + + Sbjct: 7 RPRVGLFVDTQNLYHSARDLLERTVNFETILNVATEGRELVHAISYTV----EREGEATA 62 Query: 64 HPLLDWLHYNGFQVV-AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122 P + L G++V + + G+ + + D+ + D + L+ +V+ SGD Sbjct: 63 RPFIYKLSALGYKVRRMNLTLHHVTDGGKAIYEGNWDMGIVADMVRLMDHLDIVVLGSGD 122 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 G +T +V LQ + K+V +++ + +L AD FM L L+ + Sbjct: 123 GDYTEIVEVLQERGKRVEVIAF----REHTAQKLIDAADRFMHLPDLEGAL 169 >gi|85859964|ref|YP_462166.1| putative cytoplasmic protein [Syntrophus aciditrophicus SB] gi|85723055|gb|ABC77998.1| hypothetical cytosolic protein [Syntrophus aciditrophicus SB] Length = 196 Score = 43.5 bits (101), Expect = 0.012, Method: Compositional matrix adjust. Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 28/183 (15%) Query: 10 LFIDGANLYASSKALGFDIDYRKLLK--------------AFRSRAIVIRAYYYTTVVGD 55 +F+DG NL KA D K + + VIR YYYT V GD Sbjct: 19 VFVDGENLAIRYKAGLADAPPEKHVDFLQDVYVWSHFANIPYHVHCDVIRKYYYTAVQGD 78 Query: 56 PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGR--KRVKSSMDVELAVDAFEQSEGL 113 P ++ + + + + F + GR KRV ++ E+ A + + Sbjct: 79 --------DPKIEDVETQLKNIGIEAPRVFKKKKGRPTKRVDITIATEMLTHAHRGNYDI 130 Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 LV +GD + LV A+Q + ++V ++ DP + S +L ADYF D++Y E Sbjct: 131 AILV--AGDEDYVPLVKAVQDEGRRV-VLWFFEGDPGL-SKKLEMAADYFFDISYFLCEP 186 Query: 174 ARD 176 A + Sbjct: 187 AEN 189 >gi|254236844|ref|ZP_04930167.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|126168775|gb|EAZ54286.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] Length = 164 Score = 43.5 bits (101), Expect = 0.012, Method: Compositional matrix adjust. Identities = 34/140 (24%), Positives = 62/140 (44%), Gaps = 14/140 (10%) Query: 28 IDYRKLLKAFRSRAIVIRAYYYTTVVGDP-EQQFSPLHPLLDWLHYNGFQVVAKVAKEFT 86 ++Y L ++ AY Y GDP +QQF + L GF V K + Sbjct: 30 LNYAALWADIARGGSIVEAYAYAIDRGDPRQQQFQQI------LRNLGFTVKLKPYIQRA 83 Query: 87 ENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVL 146 + K DV + +D + + ++ +V+ SGDG F L L++ ++ +V+T Sbjct: 84 DGS----AKGDWDVGITIDVLDAAPRVDEVVLLSGDGDFDLL---LEKVIRAHGVVATAY 136 Query: 147 SDPSMASDQLRRQADYFMDL 166 P + ++ L R A ++ + Sbjct: 137 GVPGLTANALIRAASRYVPI 156 >gi|303325412|ref|ZP_07355855.1| conserved hypothetical protein [Desulfovibrio sp. 3_1_syn3] gi|302863328|gb|EFL86259.1| conserved hypothetical protein [Desulfovibrio sp. 3_1_syn3] Length = 228 Score = 43.5 bits (101), Expect = 0.013, Method: Compositional matrix adjust. Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 7/95 (7%) Query: 92 KRVKSSMDVELAVDAFE---QSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSD 148 R K+S D+ L +D + S + +I SGD FT L+ LQ ++ ++S S Sbjct: 112 SRGKTSTDIHLVMDCMDDLSHSTHFDEFIILSGDADFTPLLIRLQEHARRTLVLSVGYSS 171 Query: 149 PS-MASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182 P+ A+ R + D+F+ A LK++ R DED + Sbjct: 172 PAYTAAASWRIREDWFLQQA-LKDD--RSDDEDTE 203 >gi|312881670|ref|ZP_07741448.1| hypothetical protein VIBC2010_10472 [Vibrio caribbenthicus ATCC BAA-2122] gi|309370733|gb|EFP98207.1| hypothetical protein VIBC2010_10472 [Vibrio caribbenthicus ATCC BAA-2122] Length = 158 Score = 43.5 bits (101), Expect = 0.013, Method: Compositional matrix adjust. Identities = 42/162 (25%), Positives = 74/162 (45%), Gaps = 19/162 (11%) Query: 6 EKIALFIDGANLYASSKA---LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 EKIA+F+D N+Y +++ FD ++ + A +V AY + ++ Sbjct: 2 EKIAIFVDVQNIYYTTREKYRAHFDYNHFWHVVATEKEVVVANAY----AIASKHEKQRQ 57 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122 H +L + GF+V K + + K D+ +A+D ++ S+ ++ +++ SGD Sbjct: 58 FHHILRGI---GFEVKLKPFLQRKDGTA----KGDWDIGIALDIYDISKEVDRVILLSGD 110 Query: 123 GCFTTLVAALQRKVKKVTIVS-TVLSDPSMASDQLRRQADYF 163 G F LV +VKK + V PS+ S L D F Sbjct: 111 GDFEVLV----DRVKKTSNAKFDVFGVPSLTSQSLIDVCDNF 148 >gi|237808056|ref|YP_002892496.1| hypothetical protein Tola_1293 [Tolumonas auensis DSM 9187] gi|237500317|gb|ACQ92910.1| protein of unknown function DUF88 [Tolumonas auensis DSM 9187] Length = 162 Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust. Identities = 34/131 (25%), Positives = 62/131 (47%), Gaps = 12/131 (9%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ-QFSPL 63 E++ + +D N+Y ++K A + DY K + V++A Y GD +Q QF + Sbjct: 2 ERVVVLVDVQNIYYTTKQAYNCNFDYNAFWKKVTANRQVVKAIAYAIDRGDEKQRQFQNI 61 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF+V K + + K + D+ + +DA E ++ + +V+ SGDG Sbjct: 62 ------LRAIGFEVKLKPLIQRVDGTA----KGNWDIGITLDAMEYAKESDIVVLASGDG 111 Query: 124 CFTTLVAALQR 134 F L+ + + Sbjct: 112 DFDLLINKIHK 122 >gi|156744317|ref|YP_001434446.1| hypothetical protein Rcas_4412 [Roseiflexus castenholzii DSM 13941] gi|156235645|gb|ABU60428.1| protein of unknown function DUF88 [Roseiflexus castenholzii DSM 13941] Length = 787 Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust. Identities = 44/179 (24%), Positives = 78/179 (43%), Gaps = 40/179 (22%) Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLK--AFRSRAIVIRAYYYTTVVGDPEQQ 59 +PR +A+FID N+Y S + L + ++ ++ A R ++ RAY Sbjct: 5 NPRLDVAVFIDFENVYVSVRDKLDVNPNFEIIMDRVADLGRVVIARAY------------ 52 Query: 60 FSPLHPLLDWLHY---------NGFQVVAKVAKEFTENCGR--KRVKSSMDVELAVDAFE 108 DW Y NG + + + + GR + +K+S+D+ L +DA + Sbjct: 53 -------ADWYRYPRVTSALYANGIEPMYVPTYYYDRDLGRTGRAIKNSVDMNLCIDAMK 105 Query: 109 ---QSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 + + V+ +GD F LV A+++ K+V I+ AS L + AD F+ Sbjct: 106 TLYTNPNIGKFVLATGDRDFIPLVNAIRQHGKEVIIIGVG----GAASGHLAQSADEFI 160 >gi|307824132|ref|ZP_07654359.1| protein of unknown function DUF88 [Methylobacter tundripaludum SV96] gi|307734916|gb|EFO05766.1| protein of unknown function DUF88 [Methylobacter tundripaludum SV96] Length = 157 Score = 43.1 bits (100), Expect = 0.015, Method: Compositional matrix adjust. Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 25/166 (15%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLK--AFRSRAI----VIRAYYYTTVVGDPEQQ 59 EK+A+F+D N+Y ++K YR+ AF S+A VI A+ Y GD +QQ Sbjct: 2 EKVAIFVDVQNIYYTTKQ-----SYRRHFNYTAFWSQATADREVIAAFAYAIDKGDCKQQ 56 Query: 60 -FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVI 118 F + L GF+V K + ++ K DV + +DA + + ++ +++ Sbjct: 57 GFQQV------LRNIGFEVKLKPYIQRSDGSA----KGDWDVGITLDAIDYAAKVDVIIL 106 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 SGDG F L+ R + VT + V P++ + L A F+ Sbjct: 107 LSGDGDFDLLLDK-ARNIYGVT--TEVYGVPALTAPSLINSAGRFI 149 >gi|167035773|ref|YP_001671004.1| hypothetical protein PputGB1_4782 [Pseudomonas putida GB-1] gi|166862261|gb|ABZ00669.1| protein of unknown function DUF88 [Pseudomonas putida GB-1] Length = 159 Score = 43.1 bits (100), Expect = 0.018, Method: Compositional matrix adjust. Identities = 43/161 (26%), Positives = 71/161 (44%), Gaps = 15/161 (9%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP-EQQFSPL 63 +KIALF D NLY + + A G +Y L ++ A Y GD +QQF + Sbjct: 2 KKIALFADVQNLYYTVRQAHGCHFNYTALWADVSREGQIVEAVAYAIDRGDAKQQQFQQI 61 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + ++ K DV + +D + + ++ +V+ SGDG Sbjct: 62 ------LRNLGFDVRLKPFIQRSDGSA----KGDWDVGITLDVIDAASRVDQVVLASGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F L L+R +++ + V P + + L R A ++ Sbjct: 112 DFDLL---LERVIQRHGTEAVVYGVPGLTALSLIRAATRYV 149 >gi|158336589|ref|YP_001517763.1| hypothetical protein AM1_3453 [Acaryochloris marina MBIC11017] gi|158306830|gb|ABW28447.1| conserved domain protein [Acaryochloris marina MBIC11017] Length = 459 Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust. Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 7/81 (8%) Query: 95 KSSMDVELAVDAFE---QSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSM 151 ++++DV+L VD Q + H +I +GD F LV AL+ K+VT++ + Sbjct: 164 ENAVDVKLTVDCLNTAYQYPDVGHFIIVTGDRDFVPLVNALKTLEKQVTLIGRA----EV 219 Query: 152 ASDQLRRQADYFMDLAYLKNE 172 AS+QL AD F+DL L E Sbjct: 220 ASNQLLLSADEFIDLEKLDTE 240 >gi|313500724|gb|ADR62090.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1] Length = 159 Score = 42.7 bits (99), Expect = 0.019, Method: Compositional matrix adjust. Identities = 43/161 (26%), Positives = 71/161 (44%), Gaps = 15/161 (9%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP-EQQFSPL 63 +KIALF D NLY + + A G +Y L ++ A Y GD +QQF + Sbjct: 2 KKIALFADVQNLYYTVRQAHGCHFNYTALWADVSREGQIVEAVAYAIDRGDSKQQQFQQI 61 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + ++ K DV + +D + + ++ +V+ SGDG Sbjct: 62 ------LRNLGFDVRLKPFIQRSDGSA----KGDWDVGITLDVIDAASRVDQVVLASGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F L L+R +++ + V P + + L R A ++ Sbjct: 112 DFDLL---LERVIQRHGTEAVVYGVPGLTALSLIRAATRYV 149 >gi|297623823|ref|YP_003705257.1| hypothetical protein Trad_1595 [Truepera radiovictrix DSM 17093] gi|297165003|gb|ADI14714.1| protein of unknown function DUF88 [Truepera radiovictrix DSM 17093] Length = 173 Score = 42.7 bits (99), Expect = 0.020, Method: Compositional matrix adjust. Identities = 35/144 (24%), Positives = 69/144 (47%), Gaps = 16/144 (11%) Query: 6 EKIALFIDGANLYASSK--ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGD-------- 55 E++A+FIDG+NLY + G ++ ++ + + ++R YYY + D Sbjct: 3 ERVAVFIDGSNLYNGMRDNLTGTRVNLQEFVAQLVCKRHLVRTYYYNAPLTDDYDTERRE 62 Query: 56 PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEH 115 +Q+F + ++ + ++ + F K V ++ VE A+E + + Sbjct: 63 GQQRFFESLSRIPYVTVR----LGRLHRRFDGTLVEKGVDVAIAVESLSLAYENA--YDT 116 Query: 116 LVIFSGDGCFTTLVAALQRKVKKV 139 +++ SGDG + LV A++RK K V Sbjct: 117 VLLVSGDGDYVQLVEAIKRKGKHV 140 >gi|148657548|ref|YP_001277753.1| hypothetical protein RoseRS_3445 [Roseiflexus sp. RS-1] gi|148569658|gb|ABQ91803.1| protein of unknown function DUF88 [Roseiflexus sp. RS-1] Length = 842 Score = 42.7 bits (99), Expect = 0.023, Method: Compositional matrix adjust. Identities = 44/179 (24%), Positives = 78/179 (43%), Gaps = 40/179 (22%) Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLK--AFRSRAIVIRAYYYTTVVGDPEQQ 59 +PR +A+FID N+Y S + L + ++ ++ A R ++ RAY Sbjct: 36 NPRLDVAVFIDFENVYVSVRDKLDVNPNFEIIMDRVADLGRVVIARAY------------ 83 Query: 60 FSPLHPLLDWLHY---------NGFQVVAKVAKEFTENCGR--KRVKSSMDVELAVDAFE 108 DW Y NG + + + + GR + +K+S+D+ L +DA + Sbjct: 84 -------ADWYRYPRVTSALYANGIEPMYVPTYYYDRDLGRTGRAIKNSVDMNLCIDAMK 136 Query: 109 ---QSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 + + V+ +GD F LV A+++ K+V I+ AS L + AD F+ Sbjct: 137 TLYTNPNIAKFVLATGDRDFIPLVNAIRQHGKEVIIIGVG----GAASGHLAQSADEFI 191 >gi|94985051|ref|YP_604415.1| hypothetical protein Dgeo_0945 [Deinococcus geothermalis DSM 11300] gi|94555332|gb|ABF45246.1| protein of unknown function DUF88 [Deinococcus geothermalis DSM 11300] Length = 181 Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust. Identities = 33/141 (23%), Positives = 67/141 (47%), Gaps = 6/141 (4%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 R ++ +FID NLY S++ L +++ +L++ ++ A YT + + Sbjct: 7 RPRVGVFIDTQNLYHSARDLLERTVNFETILRSATEGRELVHAIAYTV----EREGEATA 62 Query: 64 HPLLDWLHYNGFQVV-AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122 P + L G++V + G+ + + D+ + D + L+ +V+ SGD Sbjct: 63 RPFIYKLSALGYKVRRMNLTLHHVTEGGKAIYEGNWDMGIVADMVRLIDHLDIVVLGSGD 122 Query: 123 GCFTTLVAALQRKVKKVTIVS 143 G FT +V LQ + K+V +++ Sbjct: 123 GDFTDVVEVLQERGKRVEVIA 143 >gi|212705003|ref|ZP_03313131.1| hypothetical protein DESPIG_03071 [Desulfovibrio piger ATCC 29098] gi|212671555|gb|EEB32038.1| hypothetical protein DESPIG_03071 [Desulfovibrio piger ATCC 29098] Length = 229 Score = 42.4 bits (98), Expect = 0.025, Method: Compositional matrix adjust. Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 5/84 (5%) Query: 93 RVKSSMDVELAVDAFEQSEGLEHL---VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDP 149 R K+S D+ L +D + H +I SGD FT L+ LQ ++ I+S S P Sbjct: 99 RGKTSTDIHLVMDCMDDLSHPTHFDEFIILSGDADFTPLLIRLQEHARRTLILSVGYSSP 158 Query: 150 S-MASDQLRRQADYFMDLAYLKNE 172 + A+ R + D+F+ A LK+E Sbjct: 159 AYTAAASWRIREDWFLQQA-LKDE 181 >gi|254428823|ref|ZP_05042530.1| conserved hypothetical protein [Alcanivorax sp. DG881] gi|196194992|gb|EDX89951.1| conserved hypothetical protein [Alcanivorax sp. DG881] Length = 157 Score = 42.4 bits (98), Expect = 0.026, Method: Compositional matrix adjust. Identities = 41/161 (25%), Positives = 72/161 (44%), Gaps = 15/161 (9%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 + + + +D N+Y +++ A DY + + V++A Y GD +Q+ Sbjct: 2 KTVLILVDVQNVYYTTRQAFNRRFDYNQFWSTVTAEGQVVKAIAYAIDRGDKKQR----- 56 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 + L GF+V K + ++ K DV +A+DA E + ++ +V+ SGDG Sbjct: 57 EFQNILRAIGFEVKLKPFIQRSDGSA----KGDWDVGIAIDALEYAAEVDSVVLVSGDGD 112 Query: 125 FTTLVAALQ-RKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F LV L+ K K V + + +D L R A F+ Sbjct: 113 FDLLVDKLRVDKGKHVDVYGV----APLTADSLARAASRFV 149 >gi|325271797|ref|ZP_08138266.1| hypothetical protein G1E_03075 [Pseudomonas sp. TJI-51] gi|324103068|gb|EGC00446.1| hypothetical protein G1E_03075 [Pseudomonas sp. TJI-51] Length = 159 Score = 42.4 bits (98), Expect = 0.027, Method: Compositional matrix adjust. Identities = 43/161 (26%), Positives = 71/161 (44%), Gaps = 15/161 (9%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP-EQQFSPL 63 +KIALF D NLY + + A G +Y L ++ A Y GD +QQF + Sbjct: 2 KKIALFADVQNLYYTVRQAHGCHFNYTALWADVCREGQIVEAVAYAIDRGDSKQQQFQQI 61 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + ++ K DV + +D + + ++ +V+ SGDG Sbjct: 62 ------LRNLGFDVRLKPFIQRSDGSA----KGDWDVGITLDVIDAASRVDQVVLASGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F L L+R +++ + V P + + L R A ++ Sbjct: 112 DFDLL---LERVIQRHGTEAVVYGVPGLTALSLIRAASRYV 149 >gi|220903862|ref|YP_002479174.1| hypothetical protein Ddes_0587 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868161|gb|ACL48496.1| protein of unknown function DUF88 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 240 Score = 42.0 bits (97), Expect = 0.035, Method: Compositional matrix adjust. Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 4/80 (5%) Query: 92 KRVKSSMDVELAVDAFE---QSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSD 148 R K+S D+ L +D + S + +I SGD FT L+ LQ ++ ++S S Sbjct: 98 SRGKTSTDIHLVMDCMDDLSHSTKFDEFIILSGDADFTPLLIRLQEHARRTLVLSVGYSS 157 Query: 149 PS-MASDQLRRQADYFMDLA 167 P+ A+ R + D+F+ A Sbjct: 158 PAYTAAASWRIREDWFLQQA 177 >gi|71278570|ref|YP_266902.1| hypothetical protein CPS_0134 [Colwellia psychrerythraea 34H] gi|71144310|gb|AAZ24783.1| conserved hypothetical protein [Colwellia psychrerythraea 34H] Length = 157 Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust. Identities = 42/158 (26%), Positives = 72/158 (45%), Gaps = 15/158 (9%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 +KIA+F+D N+Y +++ +YR L + ++ + A Y D +Q H Sbjct: 2 KKIAVFVDVQNIYYTTRDTYAKQFNYRLLWQELMAQGEITIANAYAIQRSDDQQ-----H 56 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 L + GF V K + ++ K DV + +D E + ++ +++ SGDG Sbjct: 57 KFQKALKHIGFDVKLKPYIQRSDGSA----KGDWDVGITIDIMEAAAEVDTVILLSGDGD 112 Query: 125 FTTLVAALQRKVKKVTIVST-VLSDPSMASDQLRRQAD 161 F L+ RKV++ VST V S + + L AD Sbjct: 113 FDLLL----RKVREKYGVSTEVYSVEKLTAKSLVEAAD 146 >gi|90415555|ref|ZP_01223489.1| hypothetical protein GB2207_09566 [marine gamma proteobacterium HTCC2207] gi|90332878|gb|EAS48048.1| hypothetical protein GB2207_09566 [marine gamma proteobacterium HTCC2207] Length = 161 Score = 41.6 bits (96), Expect = 0.045, Method: Compositional matrix adjust. Identities = 42/163 (25%), Positives = 76/163 (46%), Gaps = 18/163 (11%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ-FSPL 63 +KIA+F+D N+Y + K G +YR+L + + +++A Y D Q+ F + Sbjct: 2 KKIAVFVDVQNIYYTVKEQFGCYFNYRELWRQLGEQGEIVQATAYAIERNDAGQRGFQQV 61 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE---QSEGLEHLVIFS 120 L GF+V K + ++ K DV +A+D + + E +V+ S Sbjct: 62 ------LRDIGFEVKLKPFIQRSDGSA----KGDWDVGIAIDIMDCAATTNPPEEIVLLS 111 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163 GDG F L+A R ++ + ++V ++ + L AD+F Sbjct: 112 GDGDFDLLLA---RVSQRYAVSTSVFGVAALTAASLIDAADHF 151 >gi|76802672|ref|YP_330767.1| hypothetical protein NP4076A [Natronomonas pharaonis DSM 2160] gi|76558537|emb|CAI50129.1| conserved hypothetical protein [Natronomonas pharaonis DSM 2160] Length = 165 Score = 41.6 bits (96), Expect = 0.045, Method: Compositional matrix adjust. Identities = 42/165 (25%), Positives = 77/165 (46%), Gaps = 18/165 (10%) Query: 6 EKIALFIDGANLYASSKAL-GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP--EQQFSP 62 +++A+ D NLY ++ + + DY +LL A +IRA Y + DP EQ+F Sbjct: 8 QRVAVLADSQNLYHTAHSYYSRNPDYTELLSAAVRDRELIRAIAYV-IRADPPTEQEF-- 64 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122 + L GF+ K K F + K++ D+ + +DA + ++ V+ SGD Sbjct: 65 ----FEALRDIGFETKIKDIKTFADGTQ----KANWDLGMCLDAVTLAPKIDTFVLASGD 116 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 G F L L+ + + + V +++L AD ++D++ Sbjct: 117 GDFARLCTHLRHE----GVRTEVFGFGDSTAEELIDAADSYVDMS 157 >gi|254417369|ref|ZP_05031111.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC 7420] gi|196175804|gb|EDX70826.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC 7420] Length = 302 Score = 41.6 bits (96), Expect = 0.046, Method: Compositional matrix adjust. Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 6/79 (7%) Query: 3 DPREKIALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 DP ++A+FID AN+Y S+ LGFD DY LL + + +A++YT + QQ Sbjct: 184 DP-NRVAIFIDAANIYHSALQLGFDPPDYADLLAFLKRQYSSYQAFFYTGLDSTNRQQKR 242 Query: 62 PLHPLLDWLHYNGFQVVAK 80 LL L G+++++K Sbjct: 243 ----LLFRLQNLGYKIISK 257 >gi|57234893|ref|YP_181094.1| hypothetical protein DET0347 [Dehalococcoides ethenogenes 195] gi|57225341|gb|AAW40398.1| conserved hypothetical protein [Dehalococcoides ethenogenes 195] Length = 194 Score = 41.6 bits (96), Expect = 0.054, Method: Compositional matrix adjust. Identities = 44/180 (24%), Positives = 72/180 (40%), Gaps = 35/180 (19%) Query: 1 MFDPREKIALFIDGANLYASSKA--LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVG---D 55 M D E++ +FIDG+N+Y K+ DID+ R ++R YYY VG + Sbjct: 1 MTDTLERVMIFIDGSNMYHYLKSHFQRTDIDFGCFCSKIAGRRRLVRIYYYNAEVGRKEE 60 Query: 56 PE------------QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELA 103 PE ++ S + L L Y+G+ K +DV L+ Sbjct: 61 PERFNDQKKFFSSPEKISYMELRLGRLVYSGWPSTPPYEK-------------GVDVLLS 107 Query: 104 VDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161 D + ++ +GD F + + A++ K V + L S +LR+ AD Sbjct: 108 TDMLSHGFKNNFDTAILVAGDSDFVSALQAVKDNGKNVEV---ALFGKETTSMELRKVAD 164 >gi|219850544|ref|YP_002464977.1| hypothetical protein Cagg_3705 [Chloroflexus aggregans DSM 9485] gi|219544803|gb|ACL26541.1| protein of unknown function DUF88 [Chloroflexus aggregans DSM 9485] Length = 600 Score = 41.2 bits (95), Expect = 0.055, Method: Compositional matrix adjust. Identities = 43/191 (22%), Positives = 80/191 (41%), Gaps = 43/191 (22%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFR--SRAIVIRAYYYTTVVGDPEQQFS 61 R +A+FID N+Y S + L ++ ++ R ++ RAY Sbjct: 6 RPDVAVFIDFENIYVSVRDKLNATPNFEAIMDRCNDLGRVVISRAY-------------- 51 Query: 62 PLHPLLDWLHY---------NGFQVVAKVAKEFTENCGR--KRVKSSMDVELAVDAFE-- 108 DW Y N + + + ++ GR + +K+S+D+ L +DA + Sbjct: 52 -----ADWYRYPRITSALYANAIEPIYVATYYYDKDAGRTGRAIKNSVDMNLCIDAMKTL 106 Query: 109 -QSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 + + V+ +GD F LV ++++ K+V I+ AS L + AD F+ Sbjct: 107 YTNPNISRFVLVTGDRDFIPLVHSIRQHGKEVYIIGIG----GAASTHLAQSADEFV--- 159 Query: 168 YLKNEIARDPD 178 + + I R P+ Sbjct: 160 FYEQLIGRQPN 170 >gi|332993345|gb|AEF03400.1| hypothetical protein ambt_09370 [Alteromonas sp. SN2] Length = 157 Score = 40.8 bits (94), Expect = 0.072, Method: Compositional matrix adjust. Identities = 35/137 (25%), Positives = 63/137 (45%), Gaps = 10/137 (7%) Query: 6 EKIALFIDGANLYASSKAL-GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 + +ALF+D N+Y +++ + + DY + V++A Y GD +Q+ Sbjct: 2 DNVALFVDVQNIYYTTRQIHKCNFDYNHFWRLATEGRNVVKAVAYAIERGDTKQR----- 56 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 + L GF+V K + + K DV + +DA E ++ + +V +GDG Sbjct: 57 EFQNILRGIGFEVKLKPFIQRADGSA----KGDWDVGITIDAMEYADLADTIVFATGDGD 112 Query: 125 FTTLVAALQRKVKKVTI 141 F L + L K K+V + Sbjct: 113 FDILASKLVDKGKEVEV 129 >gi|262189634|ref|ZP_06048020.1| hypothetical protein VIH_000054 [Vibrio cholerae CT 5369-93] gi|262034486|gb|EEY52840.1| hypothetical protein VIH_000054 [Vibrio cholerae CT 5369-93] Length = 145 Score = 40.8 bits (94), Expect = 0.074, Method: Compositional matrix adjust. Identities = 35/151 (23%), Positives = 64/151 (42%), Gaps = 12/151 (7%) Query: 18 YASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQV 77 Y + G DY + V++A Y DP+Q+ H +L + G +V Sbjct: 3 YTCREQYGRHFDYNQFWSQVTQNRTVVKANAYAIASKDPQQR--QFHHILRGI---GLEV 57 Query: 78 VAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVK 137 + K + ++ K DV +A+D +E ++ ++ +V+ SGDG F LV R + Sbjct: 58 MLKPFIQRSDGSA----KGDWDVGIALDGYELAQEVDTVVLVSGDGDFEPLVT---RIAQ 110 Query: 138 KVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 + + V P + + L A F + + Sbjct: 111 RFQVKVEVYGVPKLTAQHLIDVASQFHPIEH 141 >gi|270307718|ref|YP_003329776.1| hypothetical protein DhcVS_287 [Dehalococcoides sp. VS] gi|270153610|gb|ACZ61448.1| hypothetical protein DhcVS_287 [Dehalococcoides sp. VS] Length = 194 Score = 40.8 bits (94), Expect = 0.075, Method: Compositional matrix adjust. Identities = 44/180 (24%), Positives = 72/180 (40%), Gaps = 35/180 (19%) Query: 1 MFDPREKIALFIDGANLYASSKA--LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVG---D 55 M D E++ +FIDG+N+Y K+ DID+ R ++R YYY VG + Sbjct: 1 MTDTLERVMIFIDGSNMYHYLKSHFQRTDIDFGCFCSKIAGRRRLVRIYYYNAEVGRKEE 60 Query: 56 PE------------QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELA 103 PE ++ S + L L Y+G+ K +DV L+ Sbjct: 61 PERFNDQRKFFTSLEKISYMELRLGRLVYSGWPSTPPYEK-------------GVDVLLS 107 Query: 104 VDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161 D + ++ +GD F + + A++ K V + L S +LR+ AD Sbjct: 108 TDMLSHGFKNNFDTAILVAGDSDFVSALQAVKDNGKNVEV---ALFGKERTSMELRKVAD 164 >gi|313679721|ref|YP_004057460.1| hypothetical protein Ocepr_0830 [Oceanithermus profundus DSM 14977] gi|313152436|gb|ADR36287.1| protein of unknown function DUF88 [Oceanithermus profundus DSM 14977] Length = 184 Score = 40.8 bits (94), Expect = 0.080, Method: Compositional matrix adjust. Identities = 38/145 (26%), Positives = 73/145 (50%), Gaps = 8/145 (5%) Query: 2 FDPREKIALFIDGANLYASSK-ALGFDIDYRKLLK-AFRSRAIVIRAYYYTTVVGDPEQQ 59 ++ +++ LF+D NLY S++ +++ LLK A + R +V RA T V + E Sbjct: 7 WNAMQRVGLFVDTQNLYHSARDYYERTVNFESLLKRAVQGRQLV-RA---TAYVVEREND 62 Query: 60 FSPLHPLLDWLHYNGFQV-VAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVI 118 S P + L G++V ++ T + G+ + + D+ +A D + L+ +V+ Sbjct: 63 TSAW-PFIYKLSTMGYRVRRMNLSVHHTTDEGKPIYEGNWDMGIAADMVRLMDALDVVVL 121 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVS 143 SGDG F ++ L K +V +++ Sbjct: 122 GSGDGDFVDILEVLMEKGIRVEVIA 146 >gi|92112887|ref|YP_572815.1| hypothetical protein Csal_0758 [Chromohalobacter salexigens DSM 3043] gi|91795977|gb|ABE58116.1| protein of unknown function DUF88 [Chromohalobacter salexigens DSM 3043] Length = 158 Score = 40.8 bits (94), Expect = 0.088, Method: Compositional matrix adjust. Identities = 41/161 (25%), Positives = 70/161 (43%), Gaps = 13/161 (8%) Query: 7 KIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 ++A+F+D N+Y + + A G DYR+ + V+ Y T GD +Q+ Sbjct: 3 RVAIFVDTQNVYYTVREAYGKHFDYRRFWARATANREVLTVRCYATDKGDAKQR-----E 57 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125 + L GF+V K + + K DV + +DA E + + +V+ SGDG F Sbjct: 58 FQNILRSIGFEVRLKPFIQRADGSA----KGDWDVGITLDAIEYAAQADVVVLVSGDGDF 113 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 L ++ K V V P + ++ L A F+ + Sbjct: 114 DLLAEKIREVHGKRVEVYGV---PKLTANSLINAASQFIPI 151 >gi|325525773|gb|EGD03507.1| hypothetical protein B1M_16120 [Burkholderia sp. TJI49] Length = 287 Score = 40.4 bits (93), Expect = 0.11, Method: Compositional matrix adjust. Identities = 36/102 (35%), Positives = 46/102 (45%), Gaps = 9/102 (8%) Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122 DW Y GF+ A E E R+ K+S D+ L VDA + H+ VI SGD Sbjct: 45 DWDRYKGFKAAMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKSHVDTFVIISGD 104 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F+ LV+ L+ KKV V S SD L D F+ Sbjct: 105 SDFSPLVSKLRENAKKVIGVGVKKS----TSDLLVANCDEFI 142 >gi|218888135|ref|YP_002437456.1| hypothetical protein DvMF_3051 [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218759089|gb|ACL09988.1| protein of unknown function DUF88 [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 418 Score = 40.4 bits (93), Expect = 0.11, Method: Compositional matrix adjust. Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 5/87 (5%) Query: 95 KSSMDVEL---AVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS- 150 K+S D+ L +DA S + +I SGD FT L+ LQ ++ ++S + P+ Sbjct: 101 KTSADIHLVMDCMDALNHSTRFDEFIILSGDADFTPLLIRLQEHARRPLVLSVGYTSPAY 160 Query: 151 MASDQLRRQADYFMDLAYLKNEIARDP 177 A+ R + D+F+ A L++E +P Sbjct: 161 TAAASWRIREDWFVQQA-LEDERPAEP 186 >gi|209694823|ref|YP_002262751.1| hypothetical protein VSAL_I1288 [Aliivibrio salmonicida LFI1238] gi|208008774|emb|CAQ78973.1| conserved hypothetical protein [Aliivibrio salmonicida LFI1238] Length = 157 Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust. Identities = 45/161 (27%), Positives = 72/161 (44%), Gaps = 15/161 (9%) Query: 6 EKIALFIDGANLYASSKAL-GFDIDYRKLL-KAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 + +A+ +D N+Y +++ + DY L K R +V Y D ++QF Sbjct: 2 KTVAILVDVQNIYYTTRDVYQRHFDYNALWAKVTDGRKVVGANAYAIARSDDKQKQF--- 58 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 H +L + GF V K + + K DV +A+DA E +E + +VI SGDG Sbjct: 59 HNILRGI---GFDVKLKPFIQRRDGSA----KGDWDVGIALDAIELAEQADIVVILSGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F LV +Q + K V V + ++ L AD F+ Sbjct: 112 DFELLVQRIQSRFNKEVEVYGV---ADLTANALIDAADRFI 149 >gi|260769223|ref|ZP_05878156.1| hypothetical protein VFA_002281 [Vibrio furnissii CIP 102972] gi|260614561|gb|EEX39747.1| hypothetical protein VFA_002281 [Vibrio furnissii CIP 102972] gi|315181763|gb|ADT88676.1| hypothetical protein vfu_B00438 [Vibrio furnissii NCTC 11218] Length = 157 Score = 40.0 bits (92), Expect = 0.13, Method: Compositional matrix adjust. Identities = 40/162 (24%), Positives = 71/162 (43%), Gaps = 13/162 (8%) Query: 6 EKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 E IA+ +D N+Y + K +Y + + V++A Y D Q+ H Sbjct: 2 ETIAILVDVQNVYYTCKERYQRHFNYNHFWQQVTNGRHVVKANAYAIASNDSRQR--QFH 59 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 +L + GF+V+ K + ++ K DV + +DA E + ++ +V+ SGDG Sbjct: 60 HILRGI---GFEVMLKPYIQRSDGSA----KGDWDVGITLDAIELAPDVDTVVLVSGDGD 112 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 F L +Q K K V V P + + L A+ ++ + Sbjct: 113 FDILAKRIQDKYGKQVEVYGV---PGLTARSLVDAANRYVTI 151 >gi|134295221|ref|YP_001118956.1| hypothetical protein Bcep1808_1110 [Burkholderia vietnamiensis G4] gi|134138378|gb|ABO54121.1| protein of unknown function DUF88 [Burkholderia vietnamiensis G4] Length = 507 Score = 40.0 bits (92), Expect = 0.14, Method: Compositional matrix adjust. Identities = 36/102 (35%), Positives = 46/102 (45%), Gaps = 9/102 (8%) Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122 DW Y GF+ A E E R+ K+S D+ L VDA + H+ VI SGD Sbjct: 54 DWERYKGFKASMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKSHVDTFVIISGD 113 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F+ LV+ L+ KKV V S SD L D F+ Sbjct: 114 SDFSPLVSKLRENAKKVIGVGVKKS----TSDLLVANCDEFI 151 >gi|309789837|ref|ZP_07684416.1| hypothetical protein OSCT_0367 [Oscillochloris trichoides DG6] gi|308228141|gb|EFO81790.1| hypothetical protein OSCT_0367 [Oscillochloris trichoides DG6] Length = 635 Score = 40.0 bits (92), Expect = 0.14, Method: Compositional matrix adjust. Identities = 40/177 (22%), Positives = 76/177 (42%), Gaps = 40/177 (22%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLK--AFRSRAIVIRAYYYTTVVGDPEQQFS 61 R +A+FID N+Y S + L + ++ ++ R ++ RAY Sbjct: 7 RPDVAVFIDFENVYVSVRDKLNANPNFEAIMDRCGDLGRVVISRAY-------------- 52 Query: 62 PLHPLLDWLHY---------NGFQVVAKVAKEFTENCGR--KRVKSSMDVELAVDAFE-- 108 DW Y N + + + ++ GR + +K+S+D+ L +DA + Sbjct: 53 -----ADWYRYPRVTSALYANAIEPIYVATYYYDKDMGRTGRAIKNSVDMNLCIDAMKTL 107 Query: 109 -QSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 + + V+ +GD F LV +++++ K+V I+ AS L + AD F+ Sbjct: 108 FTNTNISRFVLVTGDRDFIPLVNSIRQQGKEVYIIGIG----GAASTHLAQSADEFV 160 >gi|75909290|ref|YP_323586.1| hypothetical protein Ava_3082 [Anabaena variabilis ATCC 29413] gi|75703015|gb|ABA22691.1| Protein of unknown function DUF88 [Anabaena variabilis ATCC 29413] Length = 261 Score = 40.0 bits (92), Expect = 0.14, Method: Compositional matrix adjust. Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 6/85 (7%) Query: 94 VKSSMDVELAVDAFEQSEGL--EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSM 151 +K+S D +L VD + + L + +I SGDG FTTL+ LQ+ K+V V+++ Sbjct: 83 LKNSADNQLIVDCLQVNNNLSPDIFIIVSGDGDFTTLINPLQKLGKQV----IVIAEAGN 138 Query: 152 ASDQLRRQADYFMDLAYLKNEIARD 176 +L+ AD F + L +I ++ Sbjct: 139 VKQKLKELADEFYFIEELSQKIQQE 163 >gi|241766896|ref|ZP_04764705.1| protein of unknown function DUF88 [Acidovorax delafieldii 2AN] gi|241362653|gb|EER58487.1| protein of unknown function DUF88 [Acidovorax delafieldii 2AN] Length = 316 Score = 40.0 bits (92), Expect = 0.15, Method: Compositional matrix adjust. Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 9/102 (8%) Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122 DW Y GF+ A E E R+ K+S D+ L VDA + H+ VI SGD Sbjct: 54 DWERYKGFKATMHEANFELIEIPHVRQSGKNSADIRLVVDALDLCYTKSHVNTFVIISGD 113 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F+ LV+ L+ K+V V S SD L D F+ Sbjct: 114 SDFSPLVSKLRENAKQVIGVGVKQS----TSDLLIANCDEFI 151 >gi|186475309|ref|YP_001856779.1| hypothetical protein Bphy_0541 [Burkholderia phymatum STM815] gi|184191768|gb|ACC69733.1| protein of unknown function DUF88 [Burkholderia phymatum STM815] Length = 440 Score = 39.7 bits (91), Expect = 0.18, Method: Compositional matrix adjust. Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 9/102 (8%) Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122 DW Y GF+ A E E R+ K+S D+ L VDA + H+ VI SGD Sbjct: 54 DWDRYKGFKAAMHEANFELIEIPHVRQSGKNSADIRLVVDALDLCYTKSHVNTFVIISGD 113 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F+ LV+ L+ K+V V S SD L D F+ Sbjct: 114 SDFSPLVSKLRENAKQVIGVGVQRS----TSDLLTANCDEFI 151 >gi|206559459|ref|YP_002230220.1| hypothetical protein BCAL1072 [Burkholderia cenocepacia J2315] gi|198035497|emb|CAR51375.1| conserved hypothetical protein [Burkholderia cenocepacia J2315] Length = 491 Score = 39.7 bits (91), Expect = 0.19, Method: Compositional matrix adjust. Identities = 36/102 (35%), Positives = 46/102 (45%), Gaps = 9/102 (8%) Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122 DW Y GF+ A E E R+ K+S D+ L VDA + H+ VI SGD Sbjct: 54 DWDRYKGFKASMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKSHVDTFVIISGD 113 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F+ LV+ L+ KKV V S SD L D F+ Sbjct: 114 SDFSPLVSKLRENAKKVIGVGVKKS----TSDLLVANCDEFI 151 >gi|161525283|ref|YP_001580295.1| hypothetical protein Bmul_2113 [Burkholderia multivorans ATCC 17616] gi|189349979|ref|YP_001945607.1| hypothetical protein BMULJ_01131 [Burkholderia multivorans ATCC 17616] gi|160342712|gb|ABX15798.1| protein of unknown function DUF88 [Burkholderia multivorans ATCC 17616] gi|189334001|dbj|BAG43071.1| conserved hypothetical protein [Burkholderia multivorans ATCC 17616] Length = 508 Score = 39.7 bits (91), Expect = 0.19, Method: Compositional matrix adjust. Identities = 36/102 (35%), Positives = 46/102 (45%), Gaps = 9/102 (8%) Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122 DW Y GF+ A E E R+ K+S D+ L VDA + H+ VI SGD Sbjct: 54 DWDRYKGFKAAMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKSHVDTFVIVSGD 113 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F+ LV+ L+ KKV V S SD L D F+ Sbjct: 114 SDFSPLVSKLRENAKKVIGVGVKKS----TSDLLVANCDEFI 151 >gi|167589253|ref|ZP_02381641.1| hypothetical protein BuboB_28211 [Burkholderia ubonensis Bu] Length = 280 Score = 39.7 bits (91), Expect = 0.19, Method: Compositional matrix adjust. Identities = 36/102 (35%), Positives = 46/102 (45%), Gaps = 9/102 (8%) Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122 DW Y GF+ A E E R+ K+S D+ L VDA + H+ VI SGD Sbjct: 45 DWDRYKGFKASMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKSHVDTFVIISGD 104 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F+ LV+ L+ KKV V S SD L D F+ Sbjct: 105 SDFSPLVSKLRENAKKVIGVGVKQS----TSDLLVANCDEFI 142 >gi|171317829|ref|ZP_02907008.1| protein of unknown function DUF88 [Burkholderia ambifaria MEX-5] gi|171096994|gb|EDT41862.1| protein of unknown function DUF88 [Burkholderia ambifaria MEX-5] Length = 643 Score = 39.7 bits (91), Expect = 0.20, Method: Compositional matrix adjust. Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 5/81 (6%) Query: 67 LDWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSG 121 DW Y GF+ A E E R+ K+S D+ L VDA + H+ VI SG Sbjct: 53 CDWERYKGFKASMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKSHVDTFVIISG 112 Query: 122 DGCFTTLVAALQRKVKKVTIV 142 D F+ LV+ L+ KKV V Sbjct: 113 DSDFSPLVSKLRENAKKVIGV 133 >gi|119898953|ref|YP_934166.1| hypothetical protein azo2662 [Azoarcus sp. BH72] gi|119671366|emb|CAL95279.1| conserved hypothetical protein [Azoarcus sp. BH72] Length = 481 Score = 39.7 bits (91), Expect = 0.20, Method: Compositional matrix adjust. Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 9/102 (8%) Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122 DW Y GF+ A E E R+ K+S D+ L VDA + H+ VI SGD Sbjct: 54 DWERYKGFKAAMHEANFELIEIPHVRQSGKNSADIRLVVDALDLCYTKAHVNTFVIISGD 113 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F+ LV+ L+ K+V V S SD L D F+ Sbjct: 114 SDFSPLVSKLRENAKQVIGVGVKQS----TSDLLIANCDEFI 151 >gi|107022270|ref|YP_620597.1| hypothetical protein Bcen_0714 [Burkholderia cenocepacia AU 1054] gi|116689215|ref|YP_834838.1| hypothetical protein Bcen2424_1193 [Burkholderia cenocepacia HI2424] gi|105892459|gb|ABF75624.1| protein of unknown function DUF88 [Burkholderia cenocepacia AU 1054] gi|116647304|gb|ABK07945.1| protein of unknown function DUF88 [Burkholderia cenocepacia HI2424] Length = 498 Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust. Identities = 36/102 (35%), Positives = 46/102 (45%), Gaps = 9/102 (8%) Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122 DW Y GF+ A E E R+ K+S D+ L VDA + H+ VI SGD Sbjct: 54 DWDRYKGFKASMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKSHVDTFVIISGD 113 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F+ LV+ L+ KKV V S SD L D F+ Sbjct: 114 SDFSPLVSKLRENAKKVIGVGVKKS----TSDLLVANCDEFI 151 >gi|221201416|ref|ZP_03574455.1| protein of unknown function DUF88 [Burkholderia multivorans CGD2M] gi|221208028|ref|ZP_03581034.1| protein of unknown function DUF88 [Burkholderia multivorans CGD2] gi|221172213|gb|EEE04654.1| protein of unknown function DUF88 [Burkholderia multivorans CGD2] gi|221178684|gb|EEE11092.1| protein of unknown function DUF88 [Burkholderia multivorans CGD2M] Length = 479 Score = 39.3 bits (90), Expect = 0.21, Method: Compositional matrix adjust. Identities = 36/102 (35%), Positives = 46/102 (45%), Gaps = 9/102 (8%) Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122 DW Y GF+ A E E R+ K+S D+ L VDA + H+ VI SGD Sbjct: 45 DWDRYKGFKAAMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKSHVDTFVIVSGD 104 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F+ LV+ L+ KKV V S SD L D F+ Sbjct: 105 SDFSPLVSKLRENAKKVIGVGVKKS----TSDLLVANCDEFI 142 >gi|170732518|ref|YP_001764465.1| hypothetical protein Bcenmc03_1168 [Burkholderia cenocepacia MC0-3] gi|169815760|gb|ACA90343.1| protein of unknown function DUF88 [Burkholderia cenocepacia MC0-3] Length = 498 Score = 39.3 bits (90), Expect = 0.21, Method: Compositional matrix adjust. Identities = 36/102 (35%), Positives = 46/102 (45%), Gaps = 9/102 (8%) Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122 DW Y GF+ A E E R+ K+S D+ L VDA + H+ VI SGD Sbjct: 54 DWDRYKGFKASMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKSHVDTFVIISGD 113 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F+ LV+ L+ KKV V S SD L D F+ Sbjct: 114 SDFSPLVSKLRENAKKVIGVGVKKS----TSDLLVANCDEFI 151 >gi|254245848|ref|ZP_04939169.1| hypothetical protein BCPG_00568 [Burkholderia cenocepacia PC184] gi|124870624|gb|EAY62340.1| hypothetical protein BCPG_00568 [Burkholderia cenocepacia PC184] Length = 500 Score = 39.3 bits (90), Expect = 0.21, Method: Compositional matrix adjust. Identities = 36/102 (35%), Positives = 46/102 (45%), Gaps = 9/102 (8%) Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122 DW Y GF+ A E E R+ K+S D+ L VDA + H+ VI SGD Sbjct: 54 DWDRYKGFKASMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKSHVDTFVIISGD 113 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F+ LV+ L+ KKV V S SD L D F+ Sbjct: 114 SDFSPLVSKLRENAKKVIGVGVKKS----TSDLLVANCDEFI 151 >gi|221214025|ref|ZP_03586998.1| protein of unknown function DUF88 [Burkholderia multivorans CGD1] gi|221166202|gb|EED98675.1| protein of unknown function DUF88 [Burkholderia multivorans CGD1] Length = 479 Score = 39.3 bits (90), Expect = 0.22, Method: Compositional matrix adjust. Identities = 36/102 (35%), Positives = 46/102 (45%), Gaps = 9/102 (8%) Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122 DW Y GF+ A E E R+ K+S D+ L VDA + H+ VI SGD Sbjct: 45 DWDRYKGFKAAMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKSHVDTFVIVSGD 104 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F+ LV+ L+ KKV V S SD L D F+ Sbjct: 105 SDFSPLVSKLRENAKKVIGVGVKKS----TSDLLVANCDEFI 142 >gi|56477068|ref|YP_158657.1| hypothetical protein ebA2897 [Aromatoleum aromaticum EbN1] gi|56313111|emb|CAI07756.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1] Length = 510 Score = 39.3 bits (90), Expect = 0.23, Method: Compositional matrix adjust. Identities = 53/178 (29%), Positives = 71/178 (39%), Gaps = 41/178 (23%) Query: 1 MFDPRE--KIALFIDGANLYASSKALGF-DIDYRK------LLKAFRSRAIVIRAYYYTT 51 M P E +ALF D N+ ALG D +Y K L + +IV++ Y Sbjct: 1 MASPHETASMALFCDFENV-----ALGVRDANYEKFDIKRVLERLLLKGSIVVKKAY--- 52 Query: 52 VVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQ 109 DW Y GF+ A E E R+ K+S D+ L VDA + Sbjct: 53 ---------------CDWDRYKGFKATMHEANFELIEIPHVRQSGKNSADIRLVVDALDL 97 Query: 110 SEGLEHL---VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 H+ VI SGD F+ LV+ L+ K+V V S SD L D F+ Sbjct: 98 CYTKSHVNTFVIISGDSDFSPLVSKLRENAKQVIGVGVKQS----TSDLLIANCDEFI 151 >gi|320334669|ref|YP_004171380.1| hypothetical protein Deima_2072 [Deinococcus maricopensis DSM 21211] gi|319755958|gb|ADV67715.1| Domain of unknown function DUF88 [Deinococcus maricopensis DSM 21211] Length = 182 Score = 39.3 bits (90), Expect = 0.23, Method: Compositional matrix adjust. Identities = 32/139 (23%), Positives = 64/139 (46%), Gaps = 6/139 (4%) Query: 7 KIALFIDGANLYASSKAL-GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 ++ +FID NLY S++ L +++ +LL+ ++RA Y + P Sbjct: 9 RVGVFIDTQNLYHSARDLYERTVNFERLLQYATEGRELVRAVSYVV----EREGEGTARP 64 Query: 66 LLDWLHYNGFQVVAKVAK-EFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 + L G++V + T G+ + + D+ + D + L+ +V+ SGDG Sbjct: 65 FIYKLSTIGYKVRRMTLQLHHTNEQGKAIWEGNWDMGIVADMTRLLDHLDVIVLGSGDGD 124 Query: 125 FTTLVAALQRKVKKVTIVS 143 FT +V Q + +V +++ Sbjct: 125 FTDMVEVFQERGVRVEVIA 143 >gi|67921187|ref|ZP_00514706.1| hypothetical protein CwatDRAFT_5542 [Crocosphaera watsonii WH 8501] gi|67857304|gb|EAM52544.1| hypothetical protein CwatDRAFT_5542 [Crocosphaera watsonii WH 8501] Length = 76 Score = 39.3 bits (90), Expect = 0.24, Method: Compositional matrix adjust. Identities = 16/34 (47%), Positives = 26/34 (76%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLL 34 + + R ++A+FIDG+NL+ ++ LG +IDY KLL Sbjct: 41 VLENRGRVAIFIDGSNLFYAALQLGIEIDYTKLL 74 >gi|78065774|ref|YP_368543.1| hypothetical protein Bcep18194_A4302 [Burkholderia sp. 383] gi|77966519|gb|ABB07899.1| protein of unknown function DUF88 [Burkholderia sp. 383] Length = 496 Score = 39.3 bits (90), Expect = 0.26, Method: Compositional matrix adjust. Identities = 36/102 (35%), Positives = 46/102 (45%), Gaps = 9/102 (8%) Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122 DW Y GF+ A E E R+ K+S D+ L VDA + H+ VI SGD Sbjct: 54 DWDRYKGFKASMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKSHVDTFVIISGD 113 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F+ LV+ L+ KKV V S SD L D F+ Sbjct: 114 SDFSPLVSKLRENAKKVIGVGVKKS----TSDLLVANCDEFI 151 >gi|282895639|ref|ZP_06303764.1| hypothetical protein CRD_00263 [Raphidiopsis brookii D9] gi|281199333|gb|EFA74198.1| hypothetical protein CRD_00263 [Raphidiopsis brookii D9] Length = 96 Score = 38.9 bits (89), Expect = 0.29, Method: Compositional matrix adjust. Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 4/80 (5%) Query: 97 SMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156 +++VE+AVD + + V+ SGDG V A+ +V ++ +M SD L Sbjct: 6 NLNVEIAVDMITLAPYYDTAVLVSGDGDLAYAVNAVTSLGSRVEVIGL----QTMTSDSL 61 Query: 157 RRQADYFMDLAYLKNEIARD 176 ADYF+D +K I +D Sbjct: 62 IDVADYFIDFDSIKQYIQKD 81 >gi|172060127|ref|YP_001807779.1| hypothetical protein BamMC406_1072 [Burkholderia ambifaria MC40-6] gi|171992644|gb|ACB63563.1| protein of unknown function DUF88 [Burkholderia ambifaria MC40-6] Length = 501 Score = 38.9 bits (89), Expect = 0.30, Method: Compositional matrix adjust. Identities = 36/102 (35%), Positives = 46/102 (45%), Gaps = 9/102 (8%) Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122 DW Y GF+ A E E R+ K+S D+ L VDA + H+ VI SGD Sbjct: 54 DWERYKGFKASMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKSHVDTFVIISGD 113 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F+ LV+ L+ KKV V S SD L D F+ Sbjct: 114 SDFSPLVSKLRENAKKVIGVGVKKS----TSDLLVANCDEFI 151 >gi|222526169|ref|YP_002570640.1| hypothetical protein Chy400_2928 [Chloroflexus sp. Y-400-fl] gi|222450048|gb|ACM54314.1| protein of unknown function DUF88 [Chloroflexus sp. Y-400-fl] Length = 652 Score = 38.9 bits (89), Expect = 0.30, Method: Compositional matrix adjust. Identities = 43/190 (22%), Positives = 79/190 (41%), Gaps = 43/190 (22%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFR--SRAIVIRAYYYTTVVGDPEQQFS 61 R +A+FID N+Y S + L ++ ++ R ++ RAY Sbjct: 6 RPDVAVFIDFENIYVSVRDKLNATPNFEAIMDRCNDLGRVVISRAY-------------- 51 Query: 62 PLHPLLDWLHY---------NGFQVVAKVAKEFTENCGR--KRVKSSMDVELAVDAFE-- 108 DW Y N + + + ++ GR + +K+S+D+ L +DA + Sbjct: 52 -----ADWYRYPRITSALYANAIEPIYVATYYYDKDAGRTGRAIKNSVDMNLCIDAMKTL 106 Query: 109 -QSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 + + V+ +GD F LV ++++ K+V I+ AS L + AD F+ Sbjct: 107 YTNPNVARFVLVTGDRDFIPLVHSIRQHGKEVYIIGIG----GAASTHLAQSADEFV--- 159 Query: 168 YLKNEIARDP 177 + + I R P Sbjct: 160 FYEQLIGRQP 169 >gi|163848259|ref|YP_001636303.1| hypothetical protein Caur_2709 [Chloroflexus aurantiacus J-10-fl] gi|163669548|gb|ABY35914.1| protein of unknown function DUF88 [Chloroflexus aurantiacus J-10-fl] Length = 669 Score = 38.9 bits (89), Expect = 0.30, Method: Compositional matrix adjust. Identities = 43/190 (22%), Positives = 79/190 (41%), Gaps = 43/190 (22%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFR--SRAIVIRAYYYTTVVGDPEQQFS 61 R +A+FID N+Y S + L ++ ++ R ++ RAY Sbjct: 23 RPDVAVFIDFENIYVSVRDKLNATPNFEAIMDRCNDLGRVVISRAY-------------- 68 Query: 62 PLHPLLDWLHY---------NGFQVVAKVAKEFTENCGR--KRVKSSMDVELAVDAFE-- 108 DW Y N + + + ++ GR + +K+S+D+ L +DA + Sbjct: 69 -----ADWYRYPRITSALYANAIEPIYVATYYYDKDAGRTGRAIKNSVDMNLCIDAMKTL 123 Query: 109 -QSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 + + V+ +GD F LV ++++ K+V I+ AS L + AD F+ Sbjct: 124 YTNPNVARFVLVTGDRDFIPLVHSIRQHGKEVYIIGIG----GAASTHLAQSADEFV--- 176 Query: 168 YLKNEIARDP 177 + + I R P Sbjct: 177 FYEQLIGRQP 186 >gi|320450466|ref|YP_004202562.1| hypothetical protein TSC_c13940 [Thermus scotoductus SA-01] gi|320150635|gb|ADW22013.1| hypothetical protein TSC_c13940 [Thermus scotoductus SA-01] Length = 178 Score = 38.9 bits (89), Expect = 0.34, Method: Compositional matrix adjust. Identities = 35/144 (24%), Positives = 68/144 (47%), Gaps = 10/144 (6%) Query: 4 PREKIALFIDGANLYASSK-ALGFDIDYRKLLK-AFRSRAIVIRAYYYTTVVGDPEQQFS 61 P +++ +F+D NLY S++ ++++ LL+ A R +V Y GD + Sbjct: 7 PDQRVGVFVDTQNLYHSARDYYERNVNFESLLRFAVGGRRLVRATAYVVEKEGD-----T 61 Query: 62 PLHPLLDWLHYNGFQV--VAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIF 119 P + L G++V + KE E G+ + + D+ +A D L+ +V+ Sbjct: 62 SAWPFIYKLSTIGYRVRRMYLTVKELGEG-GKPIYEGNWDMGIAADMVRLMPHLDVVVLG 120 Query: 120 SGDGCFTTLVAALQRKVKKVTIVS 143 SGDG F ++ L + +V +++ Sbjct: 121 SGDGDFVEILEVLMERGIRVEVIA 144 >gi|73748197|ref|YP_307436.1| hypothetical protein cbdb_A289 [Dehalococcoides sp. CBDB1] gi|147668972|ref|YP_001213790.1| hypothetical protein DehaBAV1_0326 [Dehalococcoides sp. BAV1] gi|289432247|ref|YP_003462120.1| hypothetical protein DehalGT_0297 [Dehalococcoides sp. GT] gi|73659913|emb|CAI82520.1| conserved hypothetical protein [Dehalococcoides sp. CBDB1] gi|146269920|gb|ABQ16912.1| protein of unknown function DUF88 [Dehalococcoides sp. BAV1] gi|288945967|gb|ADC73664.1| protein of unknown function DUF88 [Dehalococcoides sp. GT] Length = 194 Score = 38.9 bits (89), Expect = 0.34, Method: Compositional matrix adjust. Identities = 43/180 (23%), Positives = 70/180 (38%), Gaps = 35/180 (19%) Query: 1 MFDPREKIALFIDGANLYASSKA--LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ 58 M D E++ +FIDG+N+Y K+ DID+ ++R YYY VG E+ Sbjct: 1 MTDTLERVMIFIDGSNMYHYLKSHFQRTDIDFGCFCSKIAGHRRLVRIYYYNAEVGRKEE 60 Query: 59 Q---------FSPLHPL------LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELA 103 F+ L + L L Y+G+ K +DV L+ Sbjct: 61 PERFNDQKKFFTSLEKIPYMELRLGRLVYSGWPATPPYEK-------------GVDVLLS 107 Query: 104 VDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161 D + ++ +GD F + + A++ K V + L S +LR+ AD Sbjct: 108 TDMLSHGFKNNFDTAILVAGDSDFVSALQAVKDNGKNVEV---ALFGKESTSVELRKVAD 164 >gi|78357527|ref|YP_388976.1| hypothetical protein Dde_2484 [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219932|gb|ABB39281.1| conserved hypothetical protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 439 Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust. Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 3/65 (4%) Query: 92 KRVKSSMDVEL---AVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSD 148 K+ K+S D+ L A+DA + +I SGD FT L+ L+ +K ++S + Sbjct: 98 KQGKTSADIHLVIDALDALSHPTYFDEFIILSGDADFTPLLIRLREHARKTLVLSVGFTS 157 Query: 149 PSMAS 153 P+ A+ Sbjct: 158 PAYAA 162 >gi|115351126|ref|YP_772965.1| hypothetical protein Bamb_1072 [Burkholderia ambifaria AMMD] gi|115281114|gb|ABI86631.1| protein of unknown function DUF88 [Burkholderia ambifaria AMMD] Length = 507 Score = 38.5 bits (88), Expect = 0.37, Method: Compositional matrix adjust. Identities = 36/102 (35%), Positives = 46/102 (45%), Gaps = 9/102 (8%) Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122 DW Y GF+ A E E R+ K+S D+ L VDA + H+ VI SGD Sbjct: 54 DWERYKGFKASMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKSHVDTFVIISGD 113 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F+ LV+ L+ KKV V S SD L D F+ Sbjct: 114 SDFSPLVSKLRENAKKVIGVGVKKS----TSDLLVANCDEFI 151 >gi|302325583|gb|ADL24784.1| conserved domain protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 253 Score = 38.5 bits (88), Expect = 0.38, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 67/141 (47%), Gaps = 24/141 (17%) Query: 9 ALFIDGANLYASSKALGFDIDYRKLLKAFRSRA-IVIRAYYYTTVVGDPEQQFSP-LHPL 66 A+F+D NL ++ L+K+ +S+ +VIR Y + SP L PL Sbjct: 24 AVFVDAENL----TFWAYNNGVHDLMKSLQSQGPVVIRKAY--------GKWTSPQLSPL 71 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGC 124 + NGF+++ + + G K+S D+++ VDA E + L+ +V+ +GD Sbjct: 72 QQEFNINGFELI----QTYHPITG----KNSADIKMVVDAMEAATNPCLQTIVLATGDSD 123 Query: 125 FTTLVAALQRKVKKVTIVSTV 145 F+ L L+ KKV V + Sbjct: 124 FSPLFRKLREMGKKVIGVGPL 144 >gi|197335397|ref|YP_002155926.1| hypothetical protein VFMJ11_1205 [Vibrio fischeri MJ11] gi|197316887|gb|ACH66334.1| conserved hypothetical protein [Vibrio fischeri MJ11] Length = 157 Score = 38.5 bits (88), Expect = 0.39, Method: Compositional matrix adjust. Identities = 42/161 (26%), Positives = 71/161 (44%), Gaps = 15/161 (9%) Query: 6 EKIALFIDGANLYASSKAL-GFDIDYRKLL-KAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 + +A+ +D N+Y +++ + DY L K R +V Y D ++QF Sbjct: 2 KTVAILVDVQNIYYTTRDVYQRHFDYNALWAKVTEGRTVVGANAYAIARSDDKQKQF--- 58 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 H +L + GF V K + + K DV + +DA E +E + +V+ SGDG Sbjct: 59 HNILRGI---GFDVKLKPFIQRRDGSA----KGDWDVGITLDAIELAEQADIVVLLSGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F L+ +Q + K V V + ++ L AD F+ Sbjct: 112 DFDLLIKRIQSRFNKEVEVYGV---ADLTANSLIDAADRFI 149 >gi|300087254|ref|YP_003757776.1| hypothetical protein Dehly_0124 [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299526987|gb|ADJ25455.1| protein of unknown function DUF88 [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 227 Score = 38.5 bits (88), Expect = 0.43, Method: Compositional matrix adjust. Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Query: 6 EKIALFIDGANLYASSKALGF--DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ 58 +++ +FIDG+N+Y S KA DID K +IR YYY VG E+ Sbjct: 6 DRVMIFIDGSNMYHSLKAHWHRSDIDLSKFCAKLVGERRLIRIYYYNVEVGQREE 60 >gi|261414502|ref|YP_003248185.1| protein of unknown function DUF88 [Fibrobacter succinogenes subsp. succinogenes S85] gi|261370958|gb|ACX73703.1| protein of unknown function DUF88 [Fibrobacter succinogenes subsp. succinogenes S85] Length = 235 Score = 38.1 bits (87), Expect = 0.50, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 67/141 (47%), Gaps = 24/141 (17%) Query: 9 ALFIDGANLYASSKALGFDIDYRKLLKAFRSRA-IVIRAYYYTTVVGDPEQQFSP-LHPL 66 A+F+D NL ++ L+K+ +S+ +VIR Y + SP L PL Sbjct: 6 AVFVDAENL----TFWAYNNGVHDLMKSLQSQGPVVIRKAY--------GKWTSPQLSPL 53 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGC 124 + NGF+++ + + G K+S D+++ VDA E + L+ +V+ +GD Sbjct: 54 QQEFNINGFELI----QTYHPITG----KNSADIKMVVDAMEAATNPCLQTIVLATGDSD 105 Query: 125 FTTLVAALQRKVKKVTIVSTV 145 F+ L L+ KKV V + Sbjct: 106 FSPLFRKLREMGKKVIGVGPL 126 >gi|294666831|ref|ZP_06732064.1| carboxylesterase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292603415|gb|EFF46833.1| carboxylesterase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 222 Score = 38.1 bits (87), Expect = 0.50, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 5/85 (5%) Query: 81 VAKEFTENCGRKRVKSSMDVELAVDAFEQSEGL-EHLVIFSG--DGCFTTLVAALQRKVK 137 V +F E + + SM A+ A EQS G+ ++ +G G TL LQR V Sbjct: 73 VGMDFAERADKAGIAESMAQVEALIAREQSRGIAPERILLAGFSQGGAVTLAVGLQRSVP 132 Query: 138 KVTIV--STVLSDPSMASDQLRRQA 160 ++ ST L DP+ A+ QL+ A Sbjct: 133 LAGLIAMSTYLPDPAAAASQLQPAA 157 >gi|221195605|ref|ZP_03568659.1| conserved hypothetical protein [Atopobium rimae ATCC 49626] gi|221184371|gb|EEE16764.1| conserved hypothetical protein [Atopobium rimae ATCC 49626] Length = 256 Score = 38.1 bits (87), Expect = 0.53, Method: Compositional matrix adjust. Identities = 40/141 (28%), Positives = 62/141 (43%), Gaps = 24/141 (17%) Query: 4 PREKIALFIDGANLYASSKAL--GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 P+ IA+FID N S + + +L+ + R + RAY +S Sbjct: 7 PQSSIAVFIDYENFPVGSNGSRGALKLVFERLVD--KGRITIKRAYC----------DWS 54 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHL---VI 118 + LH G +++ E +N ++ K+S D+ LAVDA E +H+ I Sbjct: 55 RHEAVKPALHELGVELI-----EIPDNS--QKGKNSADIHLAVDALEACLTKDHIDTFAI 107 Query: 119 FSGDGCFTTLVAALQRKVKKV 139 SGD F+ LVA L+ K V Sbjct: 108 LSGDSDFSPLVAKLKEYDKTV 128 >gi|258593302|emb|CBE69641.1| conserved protein of unknown function [NC10 bacterium 'Dutch sediment'] Length = 251 Score = 38.1 bits (87), Expect = 0.56, Method: Compositional matrix adjust. Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 5/54 (9%) Query: 91 RKRV--KSSMDVELAVDAFEQSEGLEHL---VIFSGDGCFTTLVAALQRKVKKV 139 +KR+ K+S D+ LAVDA + + EHL VI SGD F+ LV+ L+ K+V Sbjct: 74 QKRISGKNSADIRLAVDAMDMAYSKEHLDTFVIVSGDSDFSPLVSKLRENNKEV 127 >gi|59711738|ref|YP_204514.1| hypothetical protein VF_1131 [Vibrio fischeri ES114] gi|59479839|gb|AAW85626.1| conserved protein [Vibrio fischeri ES114] Length = 159 Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust. Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 12/135 (8%) Query: 6 EKIALFIDGANLYASSKAL-GFDIDYRKLL-KAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 + +A+ +D N+Y +++ + DY L K R +V Y D ++QF Sbjct: 4 KTVAILVDVQNIYYTTRDVYQRHFDYNALWAKVTEGRTVVGANAYAIARSDDKQKQF--- 60 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 H +L + GF V K + + K DV + +DA E +E + +V+ SGDG Sbjct: 61 HNILRGI---GFDVKLKPFIQRRDGSA----KGDWDVGITLDAIELAEQADIVVLLSGDG 113 Query: 124 CFTTLVAALQRKVKK 138 F L+ +Q + K Sbjct: 114 DFDLLIKRIQSRFNK 128 >gi|328950408|ref|YP_004367743.1| Domain of unknown function DUF88 [Marinithermus hydrothermalis DSM 14884] gi|328450732|gb|AEB11633.1| Domain of unknown function DUF88 [Marinithermus hydrothermalis DSM 14884] Length = 186 Score = 37.7 bits (86), Expect = 0.64, Method: Compositional matrix adjust. Identities = 34/145 (23%), Positives = 66/145 (45%), Gaps = 8/145 (5%) Query: 2 FDPREKIALFIDGANLYASSK-ALGFDIDYRKLLK-AFRSRAIVIRAYYYTTVVGDPEQQ 59 + P +++ +F+D NLY S++ +++ LL A R +V Y GD Sbjct: 7 WHPTQRVGVFVDTQNLYHSARDYYERTVNFASLLNYAVAGRQLVRATAYVVERDGD---- 62 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAK-EFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVI 118 + P + L G++V + T + G+ + + D+ +A D L+ +V+ Sbjct: 63 -TSAWPFIYKLSTIGYRVRRMTLQLHHTTDDGKPIYEGNWDMGIAADMVRLMHTLDVVVL 121 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVS 143 SGDG F ++ L + +V +V+ Sbjct: 122 GSGDGDFVEILEVLMERGIRVEVVA 146 >gi|238059538|ref|ZP_04604247.1| hypothetical protein MCAG_00504 [Micromonospora sp. ATCC 39149] gi|237881349|gb|EEP70177.1| hypothetical protein MCAG_00504 [Micromonospora sp. ATCC 39149] Length = 367 Score = 37.7 bits (86), Expect = 0.66, Method: Compositional matrix adjust. Identities = 42/148 (28%), Positives = 64/148 (43%), Gaps = 23/148 (15%) Query: 3 DPREKIALFIDGANLYASSKAL--GFDIDYRKLLKAF--RSRAIVIRAYYYTTVVGDPEQ 58 D ++IALF+D NL ++ G D R + A R R +V RAY + + + Sbjct: 5 DHEDRIALFLDYENLALGAREHLGGMAFDLRPIADALAERGRVVVRRAYADWSFFDEDRR 64 Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE---QSEGLEH 115 + H L E + G R K++ D+++AVDA E + + Sbjct: 65 MLTRSHVEL---------------IEMPQRMGASR-KNAADIKMAVDAVELAFERAYVST 108 Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVS 143 VI +GD FT LV L+ K+V V Sbjct: 109 FVICTGDSDFTPLVHKLRELNKRVIGVG 136 >gi|302867482|ref|YP_003836119.1| hypothetical protein Micau_3012 [Micromonospora aurantiaca ATCC 27029] gi|315506110|ref|YP_004084997.1| hypothetical protein ML5_5375 [Micromonospora sp. L5] gi|302570341|gb|ADL46543.1| protein of unknown function DUF88 [Micromonospora aurantiaca ATCC 27029] gi|315412729|gb|ADU10846.1| protein of unknown function DUF88 [Micromonospora sp. L5] Length = 356 Score = 37.7 bits (86), Expect = 0.67, Method: Compositional matrix adjust. Identities = 42/153 (27%), Positives = 66/153 (43%), Gaps = 31/153 (20%) Query: 2 FDPREKIALFIDGANLYASSK--ALGFDIDYRKLLKAF--RSRAIVIRAYYYTTVVGDPE 57 D ++IALF+D NL + G D+R + A R R +V RAY Sbjct: 1 MDHEDRIALFLDYENLALGVRDHHGGRPFDFRPIADALAERGRVVVRRAY---------- 50 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAK----EFTENCGRKRVKSSMDVELAVDAFE---QS 110 DW +++ + + + E + G R K++ D+++AVDA E + Sbjct: 51 ---------ADWSYFDEDRRMLTRSHVELIEIPQRMGASR-KNAADIKMAVDAVELAFER 100 Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVS 143 + VI +GD FT LV L+ K+V V Sbjct: 101 GYISTFVICTGDSDFTPLVHKLRELNKRVIGVG 133 >gi|331005219|ref|ZP_08328612.1| hypothetical protein IMCC1989_1379 [gamma proteobacterium IMCC1989] gi|330420962|gb|EGG95235.1| hypothetical protein IMCC1989_1379 [gamma proteobacterium IMCC1989] Length = 170 Score = 37.7 bits (86), Expect = 0.72, Method: Compositional matrix adjust. Identities = 38/146 (26%), Positives = 68/146 (46%), Gaps = 16/146 (10%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ-QF-S 61 R+KIA+F+D N+Y +++ +YR L + +++ ++ A Y GD +Q QF S Sbjct: 11 RKKIAVFVDVQNIYYTTRDRYNKPFNYRHLWQRLQAQGDIVIANAYAIHRGDDKQLQFQS 70 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIF 119 L + GF + K + + K DV +A+D + S + +++ Sbjct: 71 ALKSI-------GFTMKLKPYIQRKDGSA----KGDWDVGIAIDVMDVAASGTADTIILL 119 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTV 145 SGDG F L+ +++ T V V Sbjct: 120 SGDGDFDLLLEKVKKDYHMTTEVYGV 145 >gi|46580394|ref|YP_011202.1| hypothetical protein DVU1985 [Desulfovibrio vulgaris str. Hildenborough] gi|120602234|ref|YP_966634.1| hypothetical protein Dvul_1187 [Desulfovibrio vulgaris DP4] gi|46449811|gb|AAS96461.1| conserved domain protein [Desulfovibrio vulgaris str. Hildenborough] gi|120562463|gb|ABM28207.1| conserved hypothetical protein [Desulfovibrio vulgaris DP4] gi|311233631|gb|ADP86485.1| hypothetical protein Deval_1329 [Desulfovibrio vulgaris RCH1] Length = 418 Score = 37.7 bits (86), Expect = 0.74, Method: Compositional matrix adjust. Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 9/89 (10%) Query: 95 KSSMDVEL---AVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS- 150 K+S D+ L +DA + + +I SGD FT L+ +Q ++ ++S + P+ Sbjct: 101 KTSADIHLVMDCMDALSHTTRFDEFIILSGDADFTPLLIRIQEHARRSLVLSVGYTSPAY 160 Query: 151 MASDQLRRQADYFMDLAYLKNEIARDPDE 179 A+ R + D+F+ A + DP E Sbjct: 161 AAAASWRIREDWFVAQA-----VEEDPQE 184 >gi|293605834|ref|ZP_06688205.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] gi|292815747|gb|EFF74857.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] Length = 673 Score = 37.4 bits (85), Expect = 0.88, Method: Compositional matrix adjust. Identities = 58/186 (31%), Positives = 75/186 (40%), Gaps = 29/186 (15%) Query: 1 MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 M P E + ALF D N+ ALG D Y+K F R ++ R ++V Sbjct: 10 MTTPNENVSMALFCDFENV-----ALGVRDTKYQK----FDIRPVLERLLLKGSIV---- 56 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEH 115 DW Y F+ A E E R+ K+S D+ L VDA + H Sbjct: 57 ----VKKAYCDWERYKEFKAPMHEANFELIEIPHVRQSGKNSADIRLVVDALDFCYTKSH 112 Query: 116 L---VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 + VI SGD F+ LV+ L+ KKV V S SD L D F+ L E Sbjct: 113 VNTFVIISGDSDFSPLVSKLRENNKKVIGVGVKQS----TSDLLIANCDEFIFYDDLARE 168 Query: 173 IARDPD 178 I R D Sbjct: 169 IQRTAD 174 >gi|159899759|ref|YP_001546006.1| hypothetical protein Haur_3241 [Herpetosiphon aurantiacus ATCC 23779] gi|159892798|gb|ABX05878.1| protein of unknown function DUF88 [Herpetosiphon aurantiacus ATCC 23779] Length = 789 Score = 37.4 bits (85), Expect = 0.90, Method: Compositional matrix adjust. Identities = 43/182 (23%), Positives = 75/182 (41%), Gaps = 42/182 (23%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDI--DYRKLLKAFR--SRAIVIRAYYYTTVVGDP 56 M P++ +A+FID N+Y S + FD ++ L++ R +V RAY Sbjct: 29 MNKPKQDVAVFIDFENIYVSVRE-KFDATPNFEALMERCEDYGRVVVARAY--------- 78 Query: 57 EQQFSPLHPLLDWLHY---------NGFQVVAKVAKEFTENCGR--KRVKSSMDVELAVD 105 DW Y N + + + ++ GR + +K+S+D+ + +D Sbjct: 79 ----------ADWYRYPRITSALFANNIEPMYVPTYYYDKDEGRMGRPIKNSVDMHMCID 128 Query: 106 AFE---QSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADY 162 A + + +GD F LV ++++ K V IV AS L + AD Sbjct: 129 AMRTLYTRTNIGSYIFITGDRDFIALVNCVRQEGKDVIIVGIG----GAASSHLAQSADE 184 Query: 163 FM 164 F+ Sbjct: 185 FL 186 >gi|220907876|ref|YP_002483187.1| hypothetical protein Cyan7425_2469 [Cyanothece sp. PCC 7425] gi|219864487|gb|ACL44826.1| protein of unknown function DUF88 [Cyanothece sp. PCC 7425] Length = 629 Score = 37.4 bits (85), Expect = 0.92, Method: Compositional matrix adjust. Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 15/96 (15%) Query: 90 GRKRVKSSMDVELAVDAFEQSE---GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVL 146 R+R K++ D++L +DA + ++ VI SGDG F +L L KKV + Sbjct: 106 SRERTKNAADIQLVIDAINLANLRPSIDTFVIVSGDGGFASLAKYLHECGKKVICCAY-- 163 Query: 147 SDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182 S AS + D F+++ +PD D++ Sbjct: 164 --KSSASKTFQSVCDGFVEIV--------EPDVDRR 189 >gi|257094026|ref|YP_003167667.1| hypothetical protein CAP2UW1_2449 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046550|gb|ACV35738.1| protein of unknown function DUF88 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 460 Score = 37.4 bits (85), Expect = 0.95, Method: Compositional matrix adjust. Identities = 35/102 (34%), Positives = 45/102 (44%), Gaps = 9/102 (8%) Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122 DW Y GF+ A E E R+ K+S D+ L VDA + H+ VI SGD Sbjct: 54 DWERYKGFKSTMHEASFELIEIPHLRQSGKNSADIRLVVDALDLCYTKSHVDTFVIISGD 113 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F+ LV+ L+ K V V S SD L D F+ Sbjct: 114 SDFSPLVSKLRENAKYVIGVGVKQS----TSDLLIGNCDEFI 151 >gi|71908802|ref|YP_286389.1| hypothetical protein Daro_3189 [Dechloromonas aromatica RCB] gi|71848423|gb|AAZ47919.1| Protein of unknown function DUF88 [Dechloromonas aromatica RCB] Length = 421 Score = 37.4 bits (85), Expect = 0.98, Method: Compositional matrix adjust. Identities = 44/164 (26%), Positives = 68/164 (41%), Gaps = 29/164 (17%) Query: 8 IALFIDGANLYASSKALGFD-IDYRKLLKAFRSR-AIVIRAYYYTTVVGDPEQQFSPLHP 65 +ALF D N+ + ++ D R +L+ ++ +IV++ Y Sbjct: 10 MALFCDFENIALGVRDAQYEKFDIRPVLERLLAKGSIVVKKAY----------------- 52 Query: 66 LLDWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFS 120 DW Y F+ A E E R+ K+S D+ + VDA + H+ VI S Sbjct: 53 -CDWDRYKAFKAAMHEANFELIEIPHVRQSGKNSADIRMVVDALDLCYTKAHVDTFVIIS 111 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 GD F+ LV+ L+ K+V V S SD L D F+ Sbjct: 112 GDSDFSPLVSKLRENAKRVIGVGVKQS----CSDLLVTNCDEFI 151 >gi|82703323|ref|YP_412889.1| hypothetical protein Nmul_A2205 [Nitrosospira multiformis ATCC 25196] gi|82411388|gb|ABB75497.1| Protein of unknown function DUF88 [Nitrosospira multiformis ATCC 25196] Length = 381 Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust. Identities = 38/113 (33%), Positives = 49/113 (43%), Gaps = 9/113 (7%) Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122 DW Y F+ A E E R+ K+S D+ L VDA + H+ VI SGD Sbjct: 54 DWDRYKTFKTALHEANFELIEIPHIRQSGKNSADIRLVVDALDLCYTKSHVNTFVIISGD 113 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 F+ LV+ L+ K+V V S SD L D F+ L EI R Sbjct: 114 SDFSPLVSKLRENAKQVIGVGVKKS----TSDLLIANCDEFIFYDDLVREIQR 162 >gi|168703228|ref|ZP_02735505.1| hypothetical protein GobsU_27096 [Gemmata obscuriglobus UQM 2246] Length = 532 Score = 37.0 bits (84), Expect = 1.0, Method: Compositional matrix adjust. Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 7/73 (9%) Query: 95 KSSMDVELAVDAFEQSEGLEHL---VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSM 151 K+S D+ L VDA + + +H+ VI SGD F+ LV+ L+ K V + LSD Sbjct: 85 KNSADIRLVVDAIDLAYSKDHIDTFVIVSGDSDFSPLVSKLKELGKHV--IGLGLSD--A 140 Query: 152 ASDQLRRQADYFM 164 SD LR D F+ Sbjct: 141 TSDLLRDNCDEFI 153 >gi|218295524|ref|ZP_03496337.1| protein of unknown function DUF88 [Thermus aquaticus Y51MC23] gi|218244156|gb|EED10682.1| protein of unknown function DUF88 [Thermus aquaticus Y51MC23] Length = 179 Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust. Identities = 35/142 (24%), Positives = 67/142 (47%), Gaps = 10/142 (7%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLK-AFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +++ +F+D NLY S++ ++++ LL+ A R +V Y GD + Sbjct: 10 QRVGVFVDTQNLYHSARDYYERNVNFESLLRFAVGGRRLVRATAYVVEKEGD-----TSA 64 Query: 64 HPLLDWLHYNGFQV--VAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 P + L G++V + KE T GR + + D+ +A D L+ +V+ SG Sbjct: 65 WPFIYKLSTIGYRVRRMYLTVKE-TGEGGRPIYEGNWDMGIAADMVRLMPYLDVVVLGSG 123 Query: 122 DGCFTTLVAALQRKVKKVTIVS 143 DG F ++ L + +V +++ Sbjct: 124 DGDFVEILEVLMERGIRVEVIA 145 >gi|294495770|ref|YP_003542263.1| hypothetical protein Mmah_1111 [Methanohalophilus mahii DSM 5219] gi|292666769|gb|ADE36618.1| protein of unknown function DUF88 [Methanohalophilus mahii DSM 5219] Length = 206 Score = 36.6 bits (83), Expect = 1.5, Method: Compositional matrix adjust. Identities = 36/159 (22%), Positives = 71/159 (44%), Gaps = 29/159 (18%) Query: 7 KIALFIDGANL-------YASSKALGFDIDYRKLLKAFRSRAIV-------IRAYYYTTV 52 ++ +FIDG NL + K + + K + + ++V IRA YYT + Sbjct: 23 RMMVFIDGENLVFNYLSLLKNGKVPNDPVQHEKDVFVWHINSVVNPQFHEIIRANYYTYI 82 Query: 53 VGDPE------QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDA 106 G E ++ + P L +N + VV K K+ ++ G +D+++ VD Sbjct: 83 TGSDETIIDQIKKLAYARPPRSKLPHNLYPVVFKKPKKRAQSKG-------VDIQMTVDI 135 Query: 107 FEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVS 143 Q + ++ + +F+GDG + ++ R K+V + + Sbjct: 136 LSQVYNNNIDTVYLFAGDGDYLPVINEAIRMGKQVYLAA 174 >gi|288561663|ref|YP_003429069.1| hypothetical protein BpOF4_20909 [Bacillus pseudofirmus OF4] gi|288548295|gb|ADC52177.1| hypothetical protein BpOF4_20909 [Bacillus pseudofirmus OF4] Length = 191 Score = 36.6 bits (83), Expect = 1.5, Method: Compositional matrix adjust. Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 4/60 (6%) Query: 95 KSSMDVELAVDAFEQS-EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMAS 153 + +DVELA+D ++++ EG E L++FSGD + LV A++R T V VL D A+ Sbjct: 97 EKGVDVELALDIYQKALEGYELLIVFSGD---SDLVPAIERAKALGTKVVAVLGDNQPAT 153 >gi|116671994|ref|YP_832927.1| hypothetical protein Arth_3452 [Arthrobacter sp. FB24] gi|116612103|gb|ABK04827.1| protein of unknown function DUF88 [Arthrobacter sp. FB24] Length = 282 Score = 36.6 bits (83), Expect = 1.6, Method: Compositional matrix adjust. Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 3/72 (4%) Query: 95 KSSMDVELAVDAFEQSEGL---EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSM 151 K++ D+EL VDA E + + E V+ SGDG F L+ L K+ + +T + Sbjct: 90 KNAADIELVVDALEVAADMPWIELFVVVSGDGDFVPLLRRLHALGKRSLVATTSQPKAGV 149 Query: 152 ASDQLRRQADYF 163 + L+ AD+F Sbjct: 150 VNKVLQSVADHF 161 >gi|320101761|ref|YP_004177352.1| hypothetical protein Isop_0206 [Isosphaera pallida ATCC 43644] gi|319749043|gb|ADV60803.1| hypothetical protein Isop_0206 [Isosphaera pallida ATCC 43644] Length = 493 Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust. Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 15/95 (15%) Query: 91 RKRVKSSMDVELAVDAFEQSE---GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLS 147 R K++ D+++A+DA + + GLE VI SGDG F+ L L K T++ Sbjct: 83 RDSRKNAADIQMAIDAIDLAHTRPGLEIFVIVSGDGGFSALARKLHEYGK--TVIGCAYQ 140 Query: 148 DPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182 S A+ R D F+ LA DP E+++ Sbjct: 141 --SAANRTFRAVCDEFVWLA--------DPIEEER 165 >gi|46199000|ref|YP_004667.1| hypothetical protein TTC0692 [Thermus thermophilus HB27] gi|46196624|gb|AAS81040.1| hypothetical conserved protein [Thermus thermophilus HB27] Length = 180 Score = 36.2 bits (82), Expect = 1.8, Method: Compositional matrix adjust. Identities = 35/142 (24%), Positives = 66/142 (46%), Gaps = 10/142 (7%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLK-AFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +++ +F+D NLY S++ ++++ LL+ A R +V Y GD + Sbjct: 11 QRVGVFVDTQNLYHSARDYYERNVNFESLLRFAVGGRRLVRATAYVVEKEGD-----TSA 65 Query: 64 HPLLDWLHYNGFQV--VAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 P + L G++V + KE T GR + D+ +A D L+ +V+ SG Sbjct: 66 WPFIYKLSTIGYKVRRMYLTVKE-TGEGGRPIYSGNWDMGIAADMVRLMPYLDVVVLGSG 124 Query: 122 DGCFTTLVAALQRKVKKVTIVS 143 DG F ++ L + +V +++ Sbjct: 125 DGDFVEILEVLMERGIRVEVIA 146 >gi|88810791|ref|ZP_01126048.1| hypothetical protein NB231_16963 [Nitrococcus mobilis Nb-231] gi|88792421|gb|EAR23531.1| hypothetical protein NB231_16963 [Nitrococcus mobilis Nb-231] Length = 196 Score = 36.2 bits (82), Expect = 2.1, Method: Compositional matrix adjust. Identities = 44/188 (23%), Positives = 74/188 (39%), Gaps = 31/188 (16%) Query: 11 FIDGANLYASS-KALG--FDIDYRKLLKAFRSR-AIVIRAYYYTTVVGDPEQQFSPLHPL 66 IDG+ ++A++ + G +DY +L + ++ R YY +V D H Sbjct: 6 LIDGSYIHANNIQRFGPHTRVDYLRLRRLIEEHLGVLWRGYYLNSVQSDAHSARERFHSW 65 Query: 67 LDWLHYNGFQVVAK--------VAKEFTENCGRK----------------RVKSSMDVEL 102 L NG ++ K V F +CG K + + +DV L Sbjct: 66 LQSAAPNGPHLIVKLYGLKNERVENAFCVDCGTKIEVCCPHGGPDHHLVNQRQMGVDVGL 125 Query: 103 AVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIV---STVLSDPSMASDQLRRQ 159 A A E + LV+ SGDG V L K++ + + V +D +D++ Sbjct: 126 ATLALAHKERYDCLVLSSGDGDLLDAVEHLCENGKRIELAVFSTGVSTDLQARADRVLWI 185 Query: 160 ADYFMDLA 167 D+ +LA Sbjct: 186 DDHMDELA 193 >gi|55981026|ref|YP_144323.1| hypothetical protein TTHA1057 [Thermus thermophilus HB8] gi|55772439|dbj|BAD70880.1| conserved hypothetical protein [Thermus thermophilus HB8] Length = 180 Score = 36.2 bits (82), Expect = 2.1, Method: Compositional matrix adjust. Identities = 35/142 (24%), Positives = 66/142 (46%), Gaps = 10/142 (7%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLK-AFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +++ +F+D NLY S++ ++++ LL+ A R +V Y GD + Sbjct: 11 QRVGVFVDTQNLYHSARDYYERNVNFESLLRFAVGGRRLVRATAYVVEKEGD-----TSA 65 Query: 64 HPLLDWLHYNGFQV--VAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 P + L G++V + KE T GR + D+ +A D L+ +V+ SG Sbjct: 66 WPFIYKLSTIGYKVRRMYLTVKE-TGEGGRPIYSGNWDMGIAADMVRLMPYLDVVVLGSG 124 Query: 122 DGCFTTLVAALQRKVKKVTIVS 143 DG F ++ L + +V +++ Sbjct: 125 DGDFVEILEVLMERGIRVEVIA 146 >gi|217970117|ref|YP_002355351.1| hypothetical protein Tmz1t_1700 [Thauera sp. MZ1T] gi|217507444|gb|ACK54455.1| protein of unknown function DUF88 [Thauera sp. MZ1T] Length = 564 Score = 36.2 bits (82), Expect = 2.1, Method: Compositional matrix adjust. Identities = 34/102 (33%), Positives = 45/102 (44%), Gaps = 9/102 (8%) Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122 DW Y F+ A E E R+ K+S D+ L VDA + H+ VI SGD Sbjct: 54 DWDRYKSFKAAMHEANFELIEIPHVRQSGKNSADIRLVVDALDLCYTKSHVDTFVIISGD 113 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F+ LV+ L+ K+V V S SD L D F+ Sbjct: 114 SDFSPLVSKLRENAKQVIGVGVKQS----TSDLLIANCDEFI 151 >gi|331700009|ref|YP_004336248.1| hypothetical protein Psed_6296 [Pseudonocardia dioxanivorans CB1190] gi|326954698|gb|AEA28395.1| Domain of unknown function DUF88 [Pseudonocardia dioxanivorans CB1190] Length = 367 Score = 36.2 bits (82), Expect = 2.2, Method: Compositional matrix adjust. Identities = 43/155 (27%), Positives = 67/155 (43%), Gaps = 31/155 (20%) Query: 1 MFDPREKIALFIDGANL-YASSKALGFD-IDYRKLLKAF--RSRAIVIRAYYYTTVVGDP 56 M E+IALF+D NL + + LG D+ + A R R + RAY Sbjct: 1 MISDDERIALFLDYENLAIGAREGLGVSPFDFGPIADALAERGRVVARRAYA-------- 52 Query: 57 EQQFSPLHPLLDWLHY-NGFQVVAKVAKEFTE---NCGRKRVKSSMDVELAVDAFE---Q 109 DW ++ + +++A+ E E G R K++ D++LAVDA E + Sbjct: 53 -----------DWSYFDDDRRLLARAQVELIEIPQRLGGSR-KNAADIKLAVDAIELAYE 100 Query: 110 SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVST 144 + I +GD FT LV L+ K+V + Sbjct: 101 RGFVTTFAIGTGDSDFTPLVHKLREMDKRVIGIGV 135 >gi|134282577|ref|ZP_01769281.1| conserved hypothetical protein [Burkholderia pseudomallei 305] gi|134246134|gb|EBA46224.1| conserved hypothetical protein [Burkholderia pseudomallei 305] Length = 622 Score = 35.8 bits (81), Expect = 2.4, Method: Compositional matrix adjust. Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 5/81 (6%) Query: 67 LDWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSG 121 DW Y F+ A E E R+ K+S D+ L VDA + H+ VI SG Sbjct: 196 CDWDRYKTFKAAMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKAHVDTFVIISG 255 Query: 122 DGCFTTLVAALQRKVKKVTIV 142 D F+ LV+ L+ K+V V Sbjct: 256 DSDFSPLVSKLRENAKRVIGV 276 >gi|320103701|ref|YP_004179292.1| hypothetical protein Isop_2164 [Isosphaera pallida ATCC 43644] gi|319750983|gb|ADV62743.1| hypothetical protein Isop_2164 [Isosphaera pallida ATCC 43644] Length = 294 Score = 35.8 bits (81), Expect = 2.6, Method: Compositional matrix adjust. Identities = 46/167 (27%), Positives = 71/167 (42%), Gaps = 35/167 (20%) Query: 8 IALFIDGANL---YASSKALGFDIDYRKLLKAF--RSRAIVIRAYYYTTVVGDPEQQFSP 62 +A+F+D NL + + K F+I K+L+ + + IV +AY Sbjct: 10 LAVFVDLENLAMGFQNQKKARFEI--HKVLERLVEKGKLIVKKAY--------------- 52 Query: 63 LHPLLDWLHYNGFQV-VAKVAKEFTENCGRKRV-KSSMDVELAVDAFEQSEGLEHL---V 117 DW Y + + A E E R + K+S D+ L VDA + + H+ V Sbjct: 53 ----ADWNRYQAYTAPFHEAAIELIEIPRRSQTGKNSADIRLVVDAMDLAWSKPHVDTFV 108 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 I SGD F+ LV+ L+ K V + S S+ LR D F+ Sbjct: 109 IVSGDSDFSPLVSKLKENGKHVIGLGMKGS----TSELLRDNCDEFI 151 >gi|83717296|ref|YP_439296.1| hypothetical protein BTH_II1099 [Burkholderia thailandensis E264] gi|83651121|gb|ABC35185.1| Protein of unknown function family [Burkholderia thailandensis E264] Length = 472 Score = 35.8 bits (81), Expect = 2.7, Method: Compositional matrix adjust. Identities = 34/102 (33%), Positives = 45/102 (44%), Gaps = 9/102 (8%) Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122 DW Y F+ A E E R+ K+S D+ L VDA + H+ VI SGD Sbjct: 54 DWDRYKTFKAAMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGD 113 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F+ LV+ L+ K+V V S SD L D F+ Sbjct: 114 SDFSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFI 151 >gi|167839964|ref|ZP_02466648.1| hypothetical protein Bpse38_25044 [Burkholderia thailandensis MSMB43] Length = 445 Score = 35.8 bits (81), Expect = 2.7, Method: Compositional matrix adjust. Identities = 50/170 (29%), Positives = 69/170 (40%), Gaps = 32/170 (18%) Query: 8 IALFIDGANLYASSKALGFD-IDYRKLL-KAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 +ALF D N+ + F+ D R +L K +IV++ Y Sbjct: 1 MALFCDFENIALGVRDTKFEKFDIRPVLEKLLLKGSIVVKKAY----------------- 43 Query: 66 LLDWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFS 120 DW Y F+ A E E R+ K+S D+ L VDA + H+ VI S Sbjct: 44 -CDWDRYKTFKAAMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKAHVDTFVIIS 102 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM---DLA 167 GD F+ LV+ L+ K+V V S SD L D F+ DLA Sbjct: 103 GDSDFSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFIFYDDLA 148 >gi|167820046|ref|ZP_02451726.1| hypothetical protein Bpse9_33267 [Burkholderia pseudomallei 91] Length = 460 Score = 35.8 bits (81), Expect = 2.9, Method: Compositional matrix adjust. Identities = 34/102 (33%), Positives = 45/102 (44%), Gaps = 9/102 (8%) Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122 DW Y F+ A E E R+ K+S D+ L VDA + H+ VI SGD Sbjct: 45 DWDRYKTFKAAMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGD 104 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F+ LV+ L+ K+V V S SD L D F+ Sbjct: 105 SDFSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFI 142 >gi|126456340|ref|YP_001075832.1| hypothetical protein BURPS1106A_A1798 [Burkholderia pseudomallei 1106a] gi|242312308|ref|ZP_04811325.1| conserved hypothetical protein [Burkholderia pseudomallei 1106b] gi|126230108|gb|ABN93521.1| conserved hypothetical protein [Burkholderia pseudomallei 1106a] gi|242135547|gb|EES21950.1| conserved hypothetical protein [Burkholderia pseudomallei 1106b] Length = 483 Score = 35.8 bits (81), Expect = 2.9, Method: Compositional matrix adjust. Identities = 34/102 (33%), Positives = 45/102 (44%), Gaps = 9/102 (8%) Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122 DW Y F+ A E E R+ K+S D+ L VDA + H+ VI SGD Sbjct: 54 DWDRYKTFKAAMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGD 113 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F+ LV+ L+ K+V V S SD L D F+ Sbjct: 114 SDFSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFI 151 >gi|53722351|ref|YP_111336.1| hypothetical protein BPSS1326 [Burkholderia pseudomallei K96243] gi|52212765|emb|CAH38797.1| conserved hypothetical protein [Burkholderia pseudomallei K96243] Length = 483 Score = 35.8 bits (81), Expect = 2.9, Method: Compositional matrix adjust. Identities = 34/102 (33%), Positives = 45/102 (44%), Gaps = 9/102 (8%) Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122 DW Y F+ A E E R+ K+S D+ L VDA + H+ VI SGD Sbjct: 54 DWDRYKTFKAAMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGD 113 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F+ LV+ L+ K+V V S SD L D F+ Sbjct: 114 SDFSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFI 151 >gi|167577696|ref|ZP_02370570.1| hypothetical protein BthaT_06146 [Burkholderia thailandensis TXDOH] Length = 463 Score = 35.8 bits (81), Expect = 2.9, Method: Compositional matrix adjust. Identities = 34/102 (33%), Positives = 45/102 (44%), Gaps = 9/102 (8%) Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122 DW Y F+ A E E R+ K+S D+ L VDA + H+ VI SGD Sbjct: 45 DWDRYKTFKAAMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGD 104 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F+ LV+ L+ K+V V S SD L D F+ Sbjct: 105 SDFSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFI 142 >gi|217418449|ref|ZP_03449956.1| conserved hypothetical protein [Burkholderia pseudomallei 576] gi|217397753|gb|EEC37768.1| conserved hypothetical protein [Burkholderia pseudomallei 576] Length = 500 Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust. Identities = 34/102 (33%), Positives = 45/102 (44%), Gaps = 9/102 (8%) Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122 DW Y F+ A E E R+ K+S D+ L VDA + H+ VI SGD Sbjct: 71 DWDRYKTFKAAMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGD 130 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F+ LV+ L+ K+V V S SD L D F+ Sbjct: 131 SDFSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFI 168 >gi|167898481|ref|ZP_02485882.1| hypothetical protein Bpse7_32411 [Burkholderia pseudomallei 7894] Length = 456 Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust. Identities = 34/102 (33%), Positives = 45/102 (44%), Gaps = 9/102 (8%) Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122 DW Y F+ A E E R+ K+S D+ L VDA + H+ VI SGD Sbjct: 45 DWDRYKTFKAAMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGD 104 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F+ LV+ L+ K+V V S SD L D F+ Sbjct: 105 SDFSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFI 142 >gi|167615822|ref|ZP_02384457.1| hypothetical protein BthaB_05981 [Burkholderia thailandensis Bt4] gi|257142413|ref|ZP_05590675.1| hypothetical protein BthaA_24818 [Burkholderia thailandensis E264] Length = 463 Score = 35.4 bits (80), Expect = 3.0, Method: Compositional matrix adjust. Identities = 34/102 (33%), Positives = 45/102 (44%), Gaps = 9/102 (8%) Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122 DW Y F+ A E E R+ K+S D+ L VDA + H+ VI SGD Sbjct: 45 DWDRYKTFKAAMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGD 104 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F+ LV+ L+ K+V V S SD L D F+ Sbjct: 105 SDFSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFI 142 >gi|254174034|ref|ZP_04880697.1| protein of unknown function [Burkholderia mallei ATCC 10399] gi|254356680|ref|ZP_04972955.1| protein of unknown function [Burkholderia mallei 2002721280] gi|148025707|gb|EDK83830.1| protein of unknown function [Burkholderia mallei 2002721280] gi|160695081|gb|EDP85051.1| protein of unknown function [Burkholderia mallei ATCC 10399] Length = 477 Score = 35.4 bits (80), Expect = 3.0, Method: Compositional matrix adjust. Identities = 34/102 (33%), Positives = 45/102 (44%), Gaps = 9/102 (8%) Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122 DW Y F+ A E E R+ K+S D+ L VDA + H+ VI SGD Sbjct: 45 DWDRYKTFKAAMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGD 104 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F+ LV+ L+ K+V V S SD L D F+ Sbjct: 105 SDFSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFI 142 >gi|167923021|ref|ZP_02510112.1| hypothetical protein BpseBC_30982 [Burkholderia pseudomallei BCC215] Length = 477 Score = 35.4 bits (80), Expect = 3.0, Method: Compositional matrix adjust. Identities = 34/102 (33%), Positives = 45/102 (44%), Gaps = 9/102 (8%) Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122 DW Y F+ A E E R+ K+S D+ L VDA + H+ VI SGD Sbjct: 45 DWDRYKTFKAAMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGD 104 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F+ LV+ L+ K+V V S SD L D F+ Sbjct: 105 SDFSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFI 142 >gi|226198540|ref|ZP_03794107.1| conserved hypothetical protein [Burkholderia pseudomallei Pakistan 9] gi|225929463|gb|EEH25483.1| conserved hypothetical protein [Burkholderia pseudomallei Pakistan 9] Length = 486 Score = 35.4 bits (80), Expect = 3.1, Method: Compositional matrix adjust. Identities = 34/102 (33%), Positives = 45/102 (44%), Gaps = 9/102 (8%) Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122 DW Y F+ A E E R+ K+S D+ L VDA + H+ VI SGD Sbjct: 54 DWDRYKTFKAAMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGD 113 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F+ LV+ L+ K+V V S SD L D F+ Sbjct: 114 SDFSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFI 151 >gi|126442572|ref|YP_001062878.1| hypothetical protein BURPS668_A1883 [Burkholderia pseudomallei 668] gi|126222063|gb|ABN85568.1| conserved hypothetical protein [Burkholderia pseudomallei 668] Length = 477 Score = 35.4 bits (80), Expect = 3.1, Method: Compositional matrix adjust. Identities = 34/102 (33%), Positives = 45/102 (44%), Gaps = 9/102 (8%) Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122 DW Y F+ A E E R+ K+S D+ L VDA + H+ VI SGD Sbjct: 45 DWDRYKTFKAAMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGD 104 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F+ LV+ L+ K+V V S SD L D F+ Sbjct: 105 SDFSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFI 142 >gi|167828427|ref|ZP_02459898.1| hypothetical protein Bpseu9_32389 [Burkholderia pseudomallei 9] Length = 469 Score = 35.4 bits (80), Expect = 3.1, Method: Compositional matrix adjust. Identities = 34/102 (33%), Positives = 45/102 (44%), Gaps = 9/102 (8%) Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122 DW Y F+ A E E R+ K+S D+ L VDA + H+ VI SGD Sbjct: 45 DWDRYKTFKAAMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGD 104 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F+ LV+ L+ K+V V S SD L D F+ Sbjct: 105 SDFSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFI 142 >gi|167723901|ref|ZP_02407137.1| hypothetical protein BpseD_33095 [Burkholderia pseudomallei DM98] Length = 474 Score = 35.4 bits (80), Expect = 3.2, Method: Compositional matrix adjust. Identities = 34/102 (33%), Positives = 45/102 (44%), Gaps = 9/102 (8%) Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122 DW Y F+ A E E R+ K+S D+ L VDA + H+ VI SGD Sbjct: 45 DWDRYKTFKAAMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGD 104 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F+ LV+ L+ K+V V S SD L D F+ Sbjct: 105 SDFSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFI 142 >gi|167629267|ref|YP_001679766.1| hypothetical protein HM1_0800 [Heliobacterium modesticaldum Ice1] gi|167592007|gb|ABZ83755.1| hypothetical protein HM1_0800 [Heliobacterium modesticaldum Ice1] Length = 214 Score = 35.4 bits (80), Expect = 3.2, Method: Compositional matrix adjust. Identities = 46/177 (25%), Positives = 70/177 (39%), Gaps = 30/177 (16%) Query: 6 EKIALFIDGANL-------YASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTV------ 52 +K A+FIDG L + S + +DY KL K + R YYY + Sbjct: 21 DKCAIFIDGGYLDKVFQDEFGSPR-----VDYLKLSKWLSRGTSIFRTYYYNCLPYQSNP 75 Query: 53 -VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCG-------RKRVKSSMDVELAV 104 + Q+FS L V EF N +KRV + V+LA+ Sbjct: 76 PTTEESQRFSKKQAFYGRLKQLERYEVRLGKLEFRGNRQDGTPIFVQKRVDILLGVDLAL 135 Query: 105 DAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161 A + + H IF+GD F ++ + + +T+ S+P D L R+AD Sbjct: 136 LAAKNR--ITHATIFAGDSDFLPAISVAKNEGVLITLAHGGASNP--PHDDLWREAD 188 >gi|254417374|ref|ZP_05031116.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC 7420] gi|196175809|gb|EDX70831.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC 7420] Length = 99 Score = 35.4 bits (80), Expect = 3.3, Method: Compositional matrix adjust. Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 4/69 (5%) Query: 98 MDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLR 157 +DVELA+D E ++ + ++ SGDG F + +Q+ ++V +VS + S +L Sbjct: 25 LDVELALDLVELADTYDTAILVSGDGDFVPAIERIQQLSRRVEVVSY----RATTSQKLM 80 Query: 158 RQADYFMDL 166 + AD +++L Sbjct: 81 QLADNYLNL 89 >gi|167915186|ref|ZP_02502277.1| hypothetical protein Bpse112_32216 [Burkholderia pseudomallei 112] Length = 474 Score = 35.4 bits (80), Expect = 3.3, Method: Compositional matrix adjust. Identities = 34/102 (33%), Positives = 45/102 (44%), Gaps = 9/102 (8%) Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122 DW Y F+ A E E R+ K+S D+ L VDA + H+ VI SGD Sbjct: 45 DWDRYKTFKAAMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGD 104 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F+ LV+ L+ K+V V S SD L D F+ Sbjct: 105 SDFSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFI 142 >gi|76819463|ref|YP_335506.1| hypothetical protein BURPS1710b_A0347 [Burkholderia pseudomallei 1710b] gi|254262408|ref|ZP_04953273.1| conserved hypothetical protein [Burkholderia pseudomallei 1710a] gi|76583936|gb|ABA53410.1| Protein of unknown function family [Burkholderia pseudomallei 1710b] gi|254213410|gb|EET02795.1| conserved hypothetical protein [Burkholderia pseudomallei 1710a] Length = 483 Score = 35.4 bits (80), Expect = 3.4, Method: Compositional matrix adjust. Identities = 34/102 (33%), Positives = 45/102 (44%), Gaps = 9/102 (8%) Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122 DW Y F+ A E E R+ K+S D+ L VDA + H+ VI SGD Sbjct: 54 DWDRYKTFKAAMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGD 113 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F+ LV+ L+ K+V V S SD L D F+ Sbjct: 114 SDFSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFI 151 >gi|237509073|ref|ZP_04521788.1| conserved hypothetical protein [Burkholderia pseudomallei MSHR346] gi|235001278|gb|EEP50702.1| conserved hypothetical protein [Burkholderia pseudomallei MSHR346] Length = 480 Score = 35.4 bits (80), Expect = 3.4, Method: Compositional matrix adjust. Identities = 34/102 (33%), Positives = 45/102 (44%), Gaps = 9/102 (8%) Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122 DW Y F+ A E E R+ K+S D+ L VDA + H+ VI SGD Sbjct: 54 DWDRYKTFKAAMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGD 113 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F+ LV+ L+ K+V V S SD L D F+ Sbjct: 114 SDFSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFI 151 >gi|167906832|ref|ZP_02494037.1| hypothetical protein BpseN_31680 [Burkholderia pseudomallei NCTC 13177] Length = 470 Score = 35.4 bits (80), Expect = 3.4, Method: Compositional matrix adjust. Identities = 34/102 (33%), Positives = 45/102 (44%), Gaps = 9/102 (8%) Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122 DW Y F+ A E E R+ K+S D+ L VDA + H+ VI SGD Sbjct: 45 DWDRYKTFKAAMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGD 104 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F+ LV+ L+ K+V V S SD L D F+ Sbjct: 105 SDFSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFI 142 >gi|167849880|ref|ZP_02475388.1| hypothetical protein BpseB_31835 [Burkholderia pseudomallei B7210] Length = 474 Score = 35.4 bits (80), Expect = 3.4, Method: Compositional matrix adjust. Identities = 34/102 (33%), Positives = 45/102 (44%), Gaps = 9/102 (8%) Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122 DW Y F+ A E E R+ K+S D+ L VDA + H+ VI SGD Sbjct: 45 DWDRYKTFKAAMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGD 104 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F+ LV+ L+ K+V V S SD L D F+ Sbjct: 105 SDFSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFI 142 >gi|254183703|ref|ZP_04890295.1| conserved hypothetical protein [Burkholderia pseudomallei 1655] gi|184214236|gb|EDU11279.1| conserved hypothetical protein [Burkholderia pseudomallei 1655] Length = 474 Score = 35.4 bits (80), Expect = 3.4, Method: Compositional matrix adjust. Identities = 34/102 (33%), Positives = 45/102 (44%), Gaps = 9/102 (8%) Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122 DW Y F+ A E E R+ K+S D+ L VDA + H+ VI SGD Sbjct: 45 DWDRYKTFKAAMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGD 104 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F+ LV+ L+ K+V V S SD L D F+ Sbjct: 105 SDFSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFI 142 >gi|311106775|ref|YP_003979628.1| hypothetical protein AXYL_03593 [Achromobacter xylosoxidans A8] gi|310761464|gb|ADP16913.1| hypothetical protein AXYL_03593 [Achromobacter xylosoxidans A8] Length = 576 Score = 35.4 bits (80), Expect = 3.4, Method: Compositional matrix adjust. Identities = 56/178 (31%), Positives = 73/178 (41%), Gaps = 32/178 (17%) Query: 1 MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 M P E + ALF D N+ ALG D Y+K F R ++ R ++V Sbjct: 1 MNTPNENVSMALFCDFENV-----ALGVRDTKYQK----FDIRPVLERLLLKGSIVVK-- 49 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEH 115 DW Y F+ A E E R+ K+S D+ L VDA + H Sbjct: 50 ------KAYCDWERYKEFKAPMHEANFELIEIPHVRQSGKNSADIRLVVDALDFCYTKSH 103 Query: 116 L---VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM---DLA 167 + VI SGD F+ LV+ L+ KKV V S SD L D F+ DLA Sbjct: 104 VNTFVIISGDSDFSPLVSKLRENNKKVIGVGVKQS----TSDLLIANCDEFIFYDDLA 157 >gi|257784783|ref|YP_003180000.1| hypothetical protein Apar_0980 [Atopobium parvulum DSM 20469] gi|257473290|gb|ACV51409.1| protein of unknown function DUF88 [Atopobium parvulum DSM 20469] Length = 260 Score = 35.4 bits (80), Expect = 3.5, Method: Compositional matrix adjust. Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 5/92 (5%) Query: 68 DWLHY-NGFQVVAKVAKEFTENCGRKRV-KSSMDVELAVDAFEQSEGLEHL---VIFSGD 122 DW + N + ++ E E R K+S D+ LAVDA E +H+ + SGD Sbjct: 62 DWQRFPNAITPLHELGIELIEIPDRAYTGKNSADIRLAVDAVEMCLTKDHIDTFAVLSGD 121 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASD 154 F+ LVA L+ K V V S S+ ++ Sbjct: 122 SDFSPLVAKLKEAGKTVIGVGMKESTSSLLAE 153 >gi|300123317|emb|CBK24590.2| unnamed protein product [Blastocystis hominis] Length = 1738 Score = 35.4 bits (80), Expect = 3.5, Method: Compositional matrix adjust. Identities = 37/136 (27%), Positives = 62/136 (45%), Gaps = 16/136 (11%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGD--PEQQ 59 FD + KIA + A LY S+ +L D+D +K +I+ + +G+ EQ Sbjct: 579 FD-KPKIAELCERAGLYQSALSLYTDLD---AIKRVVVNTHMIKPEFLVQYIGELPAEQA 634 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIF 119 L L+ + N ++V +VA+++++N G VE + FE+ E L F Sbjct: 635 IEVLRTLMSYNSSN-VRLVVQVAQKYSQNIG---------VEPLIALFEEFSSTEGLFYF 684 Query: 120 SGDGCFTTLVAALQRK 135 G FT+ +Q K Sbjct: 685 LGAIAFTSTDGNVQLK 700 >gi|167742874|ref|ZP_02415648.1| hypothetical protein Bpse14_32667 [Burkholderia pseudomallei 14] gi|254191183|ref|ZP_04897688.1| conserved hypothetical protein [Burkholderia pseudomallei Pasteur 52237] gi|157938856|gb|EDO94526.1| conserved hypothetical protein [Burkholderia pseudomallei Pasteur 52237] Length = 474 Score = 35.4 bits (80), Expect = 3.6, Method: Compositional matrix adjust. Identities = 34/102 (33%), Positives = 45/102 (44%), Gaps = 9/102 (8%) Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122 DW Y F+ A E E R+ K+S D+ L VDA + H+ VI SGD Sbjct: 45 DWDRYKTFKAAMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGD 104 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F+ LV+ L+ K+V V S SD L D F+ Sbjct: 105 SDFSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFI 142 >gi|302336205|ref|YP_003801412.1| protein of unknown function DUF88 [Olsenella uli DSM 7084] gi|301320045|gb|ADK68532.1| protein of unknown function DUF88 [Olsenella uli DSM 7084] Length = 258 Score = 35.0 bits (79), Expect = 4.3, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 10/77 (12%) Query: 70 LHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGDGCFT 126 LH G +++ + FT K+S D+ LAVDA E +H+ I SGD F+ Sbjct: 71 LHELGIELIEIPDRAFTG-------KNSADIRLAVDAMEMCLTKDHIDTFAILSGDSDFS 123 Query: 127 TLVAALQRKVKKVTIVS 143 LVA L+ K V V Sbjct: 124 PLVAKLKEFGKTVIGVG 140 >gi|229541784|ref|ZP_04430844.1| protein of unknown function DUF88 [Bacillus coagulans 36D1] gi|229326204|gb|EEN91879.1| protein of unknown function DUF88 [Bacillus coagulans 36D1] Length = 179 Score = 35.0 bits (79), Expect = 4.6, Method: Compositional matrix adjust. Identities = 36/128 (28%), Positives = 61/128 (47%), Gaps = 11/128 (8%) Query: 6 EKIALFIDGANLYASSKALGFD---IDYRKLLK--AFRSRAIVIRAYYYTTVVGDPEQQF 60 +++ +FIDG N A+ AL +DY KL + A R I+ R YYYT V +++ Sbjct: 2 KRVMVFIDGNNFEAALTALYGSQQRLDYLKLAEYVAARRDGILQRIYYYTAVGSLDKEKA 61 Query: 61 SPLHPLLDWLHYNGFQVVAKVA--KEFTENCGRKRV--KSSMDVELAVD--AFEQSEGLE 114 + +D L+ + +AK+ N K + + DV +AVD + + G + Sbjct: 62 AATKLFIDHLNKKVPKCIAKLGYLSVVGINALGKPIFTEKGTDVNIAVDLVSLAFNNGYD 121 Query: 115 HLVIFSGD 122 ++FS D Sbjct: 122 EAILFSAD 129 >gi|154250322|ref|YP_001411147.1| hypothetical protein Fnod_1655 [Fervidobacterium nodosum Rt17-B1] gi|154154258|gb|ABS61490.1| protein of unknown function DUF88 [Fervidobacterium nodosum Rt17-B1] Length = 432 Score = 35.0 bits (79), Expect = 4.6, Method: Compositional matrix adjust. Identities = 38/134 (28%), Positives = 56/134 (41%), Gaps = 15/134 (11%) Query: 49 YTTVVGDPEQQFSPLHPLLDWLHYN-GFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAF 107 Y +VG H + ++ YN G +++ EF N K D+ LAVD Sbjct: 34 YGRIVGGKAYGSWSKHKMPSFVLYNYGIELIEIPEAEFLPN------KKGNDIRLAVDCV 87 Query: 108 E---QSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 E + ++ + +GD FT LV L+ KKV L+ AS +L D F+ Sbjct: 88 EIALHNNVIDTFFLVTGDADFTALVYKLKSYGKKV----IALARTKSASYELVSAVDLFI 143 Query: 165 DLA-YLKNEIARDP 177 +KNE DP Sbjct: 144 PYEDIVKNEKLADP 157 >gi|330820543|ref|YP_004349405.1| hypothetical protein bgla_2g14470 [Burkholderia gladioli BSR3] gi|327372538|gb|AEA63893.1| hypothetical protein bgla_2g14470 [Burkholderia gladioli BSR3] Length = 525 Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust. Identities = 37/113 (32%), Positives = 49/113 (43%), Gaps = 9/113 (7%) Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122 DW Y F+ A E E R+ K+S D+ L VDA + H+ VI SGD Sbjct: 54 DWDRYKTFKGAMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKSHVDTFVIISGD 113 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 F+ LV+ L+ K+V V S SD L D F+ L E+ R Sbjct: 114 SDFSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFIFYDDLARELQR 162 >gi|329906041|ref|ZP_08274342.1| hypothetical protein IMCC9480_2751 [Oxalobacteraceae bacterium IMCC9480] gi|327547373|gb|EGF32203.1| hypothetical protein IMCC9480_2751 [Oxalobacteraceae bacterium IMCC9480] Length = 284 Score = 34.7 bits (78), Expect = 5.2, Method: Compositional matrix adjust. Identities = 48/167 (28%), Positives = 70/167 (41%), Gaps = 35/167 (20%) Query: 8 IALFIDGANL---YASSKALGFDIDYRKLLKAF--RSRAIVIRAYYYTTVVGDPEQQFSP 62 +ALF D N+ +K FDI RK+L+ + +V +AY Sbjct: 10 MALFCDFENVALGVRDAKYAAFDI--RKVLERLLLKGNIVVKKAY--------------- 52 Query: 63 LHPLLDWLHYNGFQV-VAKVAKEFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---V 117 DW Y F+ + + A E E R+ K+S D+ + VDA + H+ V Sbjct: 53 ----CDWDRYKDFKAAMHEAAFELIEIPHVRQSGKNSADIRMVVDALDLCYTKAHVDTFV 108 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 I SGD F+ LV+ L+ K+V V S SD L D F+ Sbjct: 109 ILSGDSDFSPLVSKLRENNKRVIGVGVKDS----TSDLLSANCDEFI 151 >gi|317407351|gb|EFV87317.1| hypothetical protein HMPREF0005_05421 [Achromobacter xylosoxidans C54] Length = 170 Score = 34.7 bits (78), Expect = 5.3, Method: Compositional matrix adjust. Identities = 35/102 (34%), Positives = 45/102 (44%), Gaps = 9/102 (8%) Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122 DW Y F+ A E E R+ K+S D+ L VDA + H+ VI SGD Sbjct: 54 DWERYKEFKAPMHEANFELIEIPHVRQSGKNSADIRLVVDALDFCYTKSHVNTFVIISGD 113 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F+ LV+ L+ KKV V S SD L D F+ Sbjct: 114 SDFSPLVSKLRENDKKVIGVGVKQS----TSDLLIANCDEFI 151 >gi|149239965|ref|XP_001525858.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] gi|146449981|gb|EDK44237.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] Length = 321 Score = 34.7 bits (78), Expect = 5.4, Method: Compositional matrix adjust. Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 10/96 (10%) Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVI 118 SP+ LL W + GF V+ K TEN KR+K ++D+ +A ++++GLE V Sbjct: 233 NISPIELLLKWSYLQGFIVLVK-----TENP--KRIKENLDI--LPEAVKENDGLEETVR 283 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASD 154 L+ AL + K +++ DP++ D Sbjct: 284 LGKIDLDVDLLEALNKPDSK-EVLTWGGVDPTLYKD 318 >gi|167566002|ref|ZP_02358918.1| hypothetical protein BoklE_25814 [Burkholderia oklahomensis EO147] Length = 524 Score = 34.7 bits (78), Expect = 5.8, Method: Compositional matrix adjust. Identities = 34/103 (33%), Positives = 45/103 (43%), Gaps = 9/103 (8%) Query: 67 LDWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSG 121 DW Y F+ A E E R+ K+S D+ L VDA + H+ VI SG Sbjct: 44 CDWDRYKTFKAAMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKAHVDTFVIISG 103 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 D F+ LV+ L+ K+V V S SD L D F+ Sbjct: 104 DSDFSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFI 142 >gi|187925165|ref|YP_001896807.1| hypothetical protein Bphyt_3191 [Burkholderia phytofirmans PsJN] gi|187716359|gb|ACD17583.1| protein of unknown function DUF88 [Burkholderia phytofirmans PsJN] Length = 478 Score = 34.7 bits (78), Expect = 5.8, Method: Compositional matrix adjust. Identities = 29/85 (34%), Positives = 39/85 (45%), Gaps = 5/85 (5%) Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122 DW Y F+ A E E R+ K+S D+ L VDA + H+ VI SGD Sbjct: 54 DWDRYKSFKGAMHEANFELIEIPHVRQSGKNSADIRLVVDALDLCYTKSHVNTFVIISGD 113 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLS 147 F+ LV+ L+ K+V V S Sbjct: 114 SDFSPLVSKLRENAKQVIGVGVQQS 138 >gi|153004596|ref|YP_001378921.1| hypothetical protein Anae109_1734 [Anaeromyxobacter sp. Fw109-5] gi|152028169|gb|ABS25937.1| protein of unknown function DUF88 [Anaeromyxobacter sp. Fw109-5] Length = 249 Score = 34.7 bits (78), Expect = 6.1, Method: Compositional matrix adjust. Identities = 40/139 (28%), Positives = 57/139 (41%), Gaps = 22/139 (15%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVI--RAYYYTTVVGDPEQQFSPL 63 ++IALFID NL + D + L A + V+ RAY T + Q+ Sbjct: 9 QRIALFIDFENLVTRTGLSAETFDLQPALDALLEKGKVVFRRAYADWTRFAEATQR---- 64 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHL---VIFS 120 LH G ++V + G K+ DV L +DA E + EH+ VI S Sbjct: 65 ------LHDKGVELVDVPP---STRAG----KNGADVRLVIDALELAYLREHIDTFVIAS 111 Query: 121 GDGCFTTLVAALQRKVKKV 139 GD F L L+ + V Sbjct: 112 GDSDFCPLAYKLRENDRNV 130 >gi|238024602|ref|YP_002908834.1| hypothetical protein bglu_2g12170 [Burkholderia glumae BGR1] gi|237879267|gb|ACR31599.1| Hypothetical protein bglu_2g12170 [Burkholderia glumae BGR1] Length = 538 Score = 34.7 bits (78), Expect = 6.1, Method: Compositional matrix adjust. Identities = 34/102 (33%), Positives = 45/102 (44%), Gaps = 9/102 (8%) Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122 DW Y F+ A E E R+ K+S D+ L VDA + H+ VI SGD Sbjct: 54 DWDRYKTFKGAMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKSHVDTFVIISGD 113 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F+ LV+ L+ K+V V S SD L D F+ Sbjct: 114 SDFSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFI 151 >gi|167573079|ref|ZP_02365953.1| hypothetical protein BoklC_24798 [Burkholderia oklahomensis C6786] Length = 468 Score = 34.7 bits (78), Expect = 6.2, Method: Compositional matrix adjust. Identities = 34/102 (33%), Positives = 45/102 (44%), Gaps = 9/102 (8%) Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122 DW Y F+ A E E R+ K+S D+ L VDA + H+ VI SGD Sbjct: 45 DWDRYKTFKAAMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGD 104 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F+ LV+ L+ K+V V S SD L D F+ Sbjct: 105 SDFSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFI 142 >gi|91785005|ref|YP_560211.1| hypothetical protein Bxe_A0775 [Burkholderia xenovorans LB400] gi|91688959|gb|ABE32159.1| Conserved hypothetical protein [Burkholderia xenovorans LB400] Length = 480 Score = 34.3 bits (77), Expect = 6.7, Method: Compositional matrix adjust. Identities = 29/85 (34%), Positives = 39/85 (45%), Gaps = 5/85 (5%) Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122 DW Y F+ A E E R+ K+S D+ L VDA + H+ VI SGD Sbjct: 54 DWDRYKSFKGAMHEANFELIEIPHVRQSGKNSADIRLVVDALDLCYTKSHVNTFVIISGD 113 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLS 147 F+ LV+ L+ K+V V S Sbjct: 114 SDFSPLVSKLRENAKQVIGVGVQQS 138 >gi|301109108|ref|XP_002903635.1| sterol 3-beta-glucosyltransferase, putative [Phytophthora infestans T30-4] gi|262097359|gb|EEY55411.1| sterol 3-beta-glucosyltransferase, putative [Phytophthora infestans T30-4] Length = 1401 Score = 34.3 bits (77), Expect = 6.8, Method: Compositional matrix adjust. Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 7/78 (8%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIV---IRAYYYTTVVGDPEQ 58 F+P + + +D + +A+ D+D RKL + F S+ I+ + AY V D + Sbjct: 1216 FEPERAVNVAVDSFYSHLPLEAMVCDVDPRKLARVFDSQHIMKLSLEAYLAVEPVRDESK 1275 Query: 59 QFSPLHPLLDWLHYNGFQ 76 F P P L Y+GF+ Sbjct: 1276 GFVPYKP----LQYDGFR 1289 >gi|296157195|ref|ZP_06840031.1| protein of unknown function DUF88 [Burkholderia sp. Ch1-1] gi|295892531|gb|EFG72313.1| protein of unknown function DUF88 [Burkholderia sp. Ch1-1] Length = 479 Score = 34.3 bits (77), Expect = 7.3, Method: Compositional matrix adjust. Identities = 29/85 (34%), Positives = 39/85 (45%), Gaps = 5/85 (5%) Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122 DW Y F+ A E E R+ K+S D+ L VDA + H+ VI SGD Sbjct: 54 DWDRYKSFKGAMHEANFELIEIPHVRQSGKNSADIRLVVDALDLCYTKSHVNTFVIISGD 113 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLS 147 F+ LV+ L+ K+V V S Sbjct: 114 SDFSPLVSKLRENAKQVIGVGVQQS 138 >gi|307730797|ref|YP_003908021.1| hypothetical protein BC1003_2777 [Burkholderia sp. CCGE1003] gi|307585332|gb|ADN58730.1| protein of unknown function DUF88 [Burkholderia sp. CCGE1003] Length = 562 Score = 34.3 bits (77), Expect = 7.9, Method: Compositional matrix adjust. Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 5/80 (6%) Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122 DW Y F+ A E E R+ K+S D+ L VDA + H+ VI SGD Sbjct: 54 DWDRYKSFKGAMHEANFELIEIPHVRQSGKNSADIRLVVDALDLCYTKSHVNTFVIISGD 113 Query: 123 GCFTTLVAALQRKVKKVTIV 142 F+ LV+ L+ K+V V Sbjct: 114 SDFSPLVSKLRENAKQVIGV 133 >gi|323527162|ref|YP_004229315.1| hypothetical protein BC1001_2841 [Burkholderia sp. CCGE1001] gi|323384164|gb|ADX56255.1| hypothetical protein BC1001_2841 [Burkholderia sp. CCGE1001] Length = 534 Score = 34.3 bits (77), Expect = 8.6, Method: Compositional matrix adjust. Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 5/80 (6%) Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122 DW Y F+ A E E R+ K+S D+ L VDA + H+ VI SGD Sbjct: 54 DWDRYKSFKGAMHEANFELIEIPHVRQSGKNSADIRLVVDALDLCYTKSHVNTFVIISGD 113 Query: 123 GCFTTLVAALQRKVKKVTIV 142 F+ LV+ L+ K+V V Sbjct: 114 SDFSPLVSKLRENAKQVIGV 133 >gi|116672106|ref|YP_833039.1| hypothetical protein Arth_3564 [Arthrobacter sp. FB24] gi|116612215|gb|ABK04939.1| hypothetical protein Arth_3564 [Arthrobacter sp. FB24] Length = 415 Score = 33.9 bits (76), Expect = 9.1, Method: Compositional matrix adjust. Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 3/55 (5%) Query: 92 KRVKSSMDVEL---AVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVS 143 +R KSS D+ L A+DA S G++ I S D FT+L+ + K T+++ Sbjct: 96 QRGKSSTDINLVLDAMDALSGSAGIDEFFIASADADFTSLIQRFRAADKMTTVIA 150 >gi|303232840|ref|ZP_07319524.1| conserved hypothetical protein [Atopobium vaginae PB189-T1-4] gi|302481030|gb|EFL44106.1| conserved hypothetical protein [Atopobium vaginae PB189-T1-4] Length = 260 Score = 33.9 bits (76), Expect = 9.3, Method: Compositional matrix adjust. Identities = 22/48 (45%), Positives = 27/48 (56%), Gaps = 3/48 (6%) Query: 95 KSSMDVELAVDAFEQSEGLEHL---VIFSGDGCFTTLVAALQRKVKKV 139 K+S D+ LAVDA E EH+ I SGD F+ LVA L+ K V Sbjct: 90 KNSADIRLAVDATEMCLTKEHIDTFAILSGDSDFSPLVAKLKEFGKTV 137 >gi|295677487|ref|YP_003606011.1| protein of unknown function DUF88 [Burkholderia sp. CCGE1002] gi|295437330|gb|ADG16500.1| protein of unknown function DUF88 [Burkholderia sp. CCGE1002] Length = 515 Score = 33.9 bits (76), Expect = 9.5, Method: Compositional matrix adjust. Identities = 29/85 (34%), Positives = 39/85 (45%), Gaps = 5/85 (5%) Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122 DW Y F+ A E E R+ K+S D+ L VDA + H+ VI SGD Sbjct: 54 DWDRYKSFKGAMHEANFELIEIPHVRQSGKNSADIRLVVDALDLCYTKSHVNTFVIISGD 113 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLS 147 F+ LV+ L+ K+V V S Sbjct: 114 SDFSPLVSKLRENAKQVIGVGVQQS 138 Searching..................................................done Results from round 2 >gi|222148076|ref|YP_002549033.1| hypothetical protein Avi_1440 [Agrobacterium vitis S4] gi|221735064|gb|ACM36027.1| conserved hypothetical protein [Agrobacterium vitis S4] Length = 192 Score = 264 bits (676), Expect = 3e-69, Method: Composition-based stats. Identities = 119/181 (65%), Positives = 150/181 (82%), Gaps = 2/181 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R ++RAYYYT ++ D Q++ Sbjct: 1 MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++V+ K AKEFT++ GR++VK +MD+ELA+DA EQSE ++HLVIFS Sbjct: 59 SSIRPLIDWLDYNGYKVITKPAKEFTDSMGRRKVKGNMDIELAIDAMEQSETVDHLVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG FTTLV ALQRK +KV++VST+ + P M +D LRRQAD+F+DL LK EI RDP E Sbjct: 119 GDGDFTTLVEALQRKGRKVSVVSTMSTQPPMIADDLRRQADHFIDLVSLKAEIGRDPSER 178 Query: 181 K 181 Sbjct: 179 P 179 >gi|227821396|ref|YP_002825366.1| hypothetical protein NGR_c08220 [Sinorhizobium fredii NGR234] gi|227340395|gb|ACP24613.1| hypothetical protein NGR_c08220 [Sinorhizobium fredii NGR234] Length = 192 Score = 264 bits (675), Expect = 4e-69, Method: Composition-based stats. Identities = 118/179 (65%), Positives = 151/179 (84%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R ++RAYYYT ++ D Q++ Sbjct: 1 MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+ELA+DA EQSE ++HLVIFS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPAKEFTDSLGRRKIKGNMDIELAIDAMEQSETVDHLVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG FTTLV ALQRK +KV++VST+ + P M +D LRRQAD+F+DLA L+ EI R+P E Sbjct: 119 GDGDFTTLVEALQRKGRKVSVVSTMSTQPPMIADDLRRQADHFIDLATLRGEIGREPSE 177 >gi|254477746|ref|ZP_05091132.1| DUF88 [Ruegeria sp. R11] gi|214031989|gb|EEB72824.1| DUF88 [Ruegeria sp. R11] Length = 189 Score = 263 bits (674), Expect = 6e-69, Method: Composition-based stats. Identities = 97/182 (53%), Positives = 137/182 (75%), Gaps = 2/182 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + E + Sbjct: 1 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFMRRGKLLRAFYYTALLENDE--Y 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLHYNGFTMVTKPAKEYTDSMGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F LV +LQR+ +V++VST+ S P M SD+LRRQAD F++L LK+ I R P E Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELEELKDVIGRPPREQ 178 Query: 181 KK 182 + Sbjct: 179 GE 180 >gi|51102762|gb|AAT95984.1| RtsE [Sinorhizobium meliloti] Length = 191 Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats. Identities = 118/179 (65%), Positives = 151/179 (84%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R ++RAYYYT ++ D Q++ Sbjct: 1 MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+ELA+DA EQSE ++HLVIFS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPAKEFTDSLGRRKIKGNMDIELAIDAMEQSESVDHLVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG FTTLV ALQRK +KV++VST+ + P M +D LRRQAD+F+DLA L+ EI R+P E Sbjct: 119 GDGDFTTLVEALQRKGRKVSVVSTMSTQPPMIADDLRRQADHFIDLATLRGEIGREPSE 177 >gi|15964816|ref|NP_385169.1| hypothetical protein SMc02407 [Sinorhizobium meliloti 1021] gi|307300886|ref|ZP_07580655.1| protein of unknown function DUF88 [Sinorhizobium meliloti BL225C] gi|307320703|ref|ZP_07600115.1| protein of unknown function DUF88 [Sinorhizobium meliloti AK83] gi|15073995|emb|CAC45642.1| Conserved hypothetical protein [Sinorhizobium meliloti 1021] gi|306893630|gb|EFN24404.1| protein of unknown function DUF88 [Sinorhizobium meliloti AK83] gi|306903841|gb|EFN34427.1| protein of unknown function DUF88 [Sinorhizobium meliloti BL225C] Length = 192 Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats. Identities = 118/179 (65%), Positives = 151/179 (84%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R ++RAYYYT ++ D Q++ Sbjct: 1 MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+ELA+DA EQSE ++HLVIFS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPAKEFTDSLGRRKIKGNMDIELAIDAMEQSESVDHLVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG FTTLV ALQRK +KV++VST+ + P M +D LRRQAD+F+DLA L+ EI R+P E Sbjct: 119 GDGDFTTLVEALQRKGRKVSVVSTMSTQPPMIADDLRRQADHFIDLATLRGEIGREPSE 177 >gi|150395899|ref|YP_001326366.1| hypothetical protein Smed_0675 [Sinorhizobium medicae WSM419] gi|150027414|gb|ABR59531.1| protein of unknown function DUF88 [Sinorhizobium medicae WSM419] Length = 193 Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats. Identities = 118/179 (65%), Positives = 151/179 (84%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R ++RAYYYT ++ D Q++ Sbjct: 2 MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 59 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+ELA+DA EQSE ++HLVIFS Sbjct: 60 SSIRPLIDWLDYNGYKVVTKPAKEFTDSLGRRKIKGNMDIELAIDAMEQSESVDHLVIFS 119 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG FTTLV ALQRK +KV++VST+ + P M +D LRRQAD+F+DLA L+ EI R+P E Sbjct: 120 GDGDFTTLVEALQRKGRKVSVVSTMATQPPMIADDLRRQADHFIDLASLRAEIGREPSE 178 >gi|294678836|ref|YP_003579451.1| hypothetical protein RCAP_rcc03320 [Rhodobacter capsulatus SB 1003] gi|294477656|gb|ADE87044.1| protein of unknown function DUF88 [Rhodobacter capsulatus SB 1003] Length = 193 Score = 262 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 96/182 (52%), Positives = 136/182 (74%), Gaps = 2/182 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + E + Sbjct: 1 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFERRGKLVRAFYYTALLENEE--Y 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNG+ +V K AKE+T++ GR++VK +MD+ELAV+A E + L+H V+FS Sbjct: 59 SPIRPLVDWLHYNGYAMVTKPAKEYTDSMGRRKVKGNMDIELAVNAMELAPRLDHAVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F LV ALQR +V++VST+ S P M +D+LRRQAD F++L L+ I R P E Sbjct: 119 GDGDFRPLVEALQRMGVRVSVVSTIRSQPPMIADELRRQADNFIELDALREVIGRPPREP 178 Query: 181 KK 182 ++ Sbjct: 179 RE 180 >gi|126728513|ref|ZP_01744329.1| hypothetical protein SSE37_21022 [Sagittula stellata E-37] gi|126711478|gb|EBA10528.1| hypothetical protein SSE37_21022 [Sagittula stellata E-37] Length = 195 Score = 262 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 95/181 (52%), Positives = 136/181 (75%), Gaps = 2/181 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + E + Sbjct: 6 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFARRGKMVRAFYYTALLENDE--Y 63 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS Sbjct: 64 SPIRPLVDWLHYNGFTMVTKPAKEYTDSQGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 123 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F LV +LQR+ +V++VST+ S P M +D+LRRQAD F++L L+ I R P E Sbjct: 124 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMIADELRRQADNFIELDELREVIGRPPREQ 183 Query: 181 K 181 + Sbjct: 184 Q 184 >gi|146278613|ref|YP_001168772.1| hypothetical protein Rsph17025_2579 [Rhodobacter sphaeroides ATCC 17025] gi|145556854|gb|ABP71467.1| protein of unknown function DUF88 [Rhodobacter sphaeroides ATCC 17025] Length = 190 Score = 262 bits (670), Expect = 1e-68, Method: Composition-based stats. Identities = 94/181 (51%), Positives = 136/181 (75%), Gaps = 2/181 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + + + Sbjct: 1 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFMRRGKLLRAFYYTALLENDD--Y 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLHYNGFTMVTKPAKEYTDSQGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F LV +LQR+ +V++VST+ S P M +D+LRRQAD F++L L+ I R P E Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMIADELRRQADNFIELDELREVIGRPPREP 178 Query: 181 K 181 + Sbjct: 179 R 179 >gi|77462212|ref|YP_351716.1| hypothetical protein RSP_1667 [Rhodobacter sphaeroides 2.4.1] gi|126461074|ref|YP_001042188.1| hypothetical protein Rsph17029_0300 [Rhodobacter sphaeroides ATCC 17029] gi|221641166|ref|YP_002527428.1| hypothetical protein RSKD131_3067 [Rhodobacter sphaeroides KD131] gi|332560093|ref|ZP_08414415.1| hypothetical protein RSWS8N_13570 [Rhodobacter sphaeroides WS8N] gi|77386630|gb|ABA77815.1| conserved hypothetical protein [Rhodobacter sphaeroides 2.4.1] gi|126102738|gb|ABN75416.1| protein of unknown function DUF88 [Rhodobacter sphaeroides ATCC 17029] gi|221161947|gb|ACM02927.1| Hypothetical Protein RSKD131_3067 [Rhodobacter sphaeroides KD131] gi|332277805|gb|EGJ23120.1| hypothetical protein RSWS8N_13570 [Rhodobacter sphaeroides WS8N] Length = 190 Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats. Identities = 94/181 (51%), Positives = 136/181 (75%), Gaps = 2/181 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + + + Sbjct: 1 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFMRRGKLLRAFYYTALLENDD--Y 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLHYNGFTMVTKPAKEYTDSQGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F LV +LQR+ +V++VST+ S P M +D+LRRQAD F++L L+ I R P E Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMIADELRRQADNFIELDELREVIGRPPREP 178 Query: 181 K 181 + Sbjct: 179 R 179 >gi|190891066|ref|YP_001977608.1| hypothetical protein RHECIAT_CH0001451 [Rhizobium etli CIAT 652] gi|218508406|ref|ZP_03506284.1| hypothetical protein RetlB5_12894 [Rhizobium etli Brasil 5] gi|190696345|gb|ACE90430.1| hypothetical conserved protein [Rhizobium etli CIAT 652] gi|327191317|gb|EGE58350.1| hypothetical protein RHECNPAF_32006 [Rhizobium etli CNPAF512] Length = 193 Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats. Identities = 116/179 (64%), Positives = 149/179 (83%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R ++RAYYYT ++ D Q++ Sbjct: 1 MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+ELA+DA EQSE ++HLVIFS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPAKEFTDSMGRRKIKGNMDIELAIDAMEQSETVDHLVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG FT LV ALQR+ +KV+++ST+ + P M +D LRRQAD+F+DL LK EI RDP E Sbjct: 119 GDGDFTNLVEALQRRGRKVSVISTMATQPPMIADDLRRQADHFIDLLSLKAEIGRDPSE 177 >gi|260428353|ref|ZP_05782332.1| RtsE [Citreicella sp. SE45] gi|260422845|gb|EEX16096.1| RtsE [Citreicella sp. SE45] Length = 191 Score = 261 bits (667), Expect = 3e-68, Method: Composition-based stats. Identities = 95/181 (52%), Positives = 136/181 (75%), Gaps = 2/181 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + E + Sbjct: 1 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFVRRGKMVRAFYYTALLENDE--Y 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLHYNGFTMVTKPAKEYTDSQGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F LV +LQR+ +V++VST+ S P M +D+LRRQAD F++L L+ I R P E Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMIADELRRQADNFIELDELREVIGRPPREQ 178 Query: 181 K 181 + Sbjct: 179 Q 179 >gi|159184584|ref|NP_354050.2| hypothetical protein Atu1028 [Agrobacterium tumefaciens str. C58] gi|159139886|gb|AAK86835.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58] Length = 189 Score = 260 bits (666), Expect = 4e-68, Method: Composition-based stats. Identities = 119/181 (65%), Positives = 150/181 (82%), Gaps = 2/181 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R ++RAYYYT ++ D Q++ Sbjct: 1 MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K AKEFT+ GR+++K +MD+ELAVDA EQSE ++HLV+FS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPAKEFTDALGRRKIKGNMDIELAVDAMEQSETVDHLVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG FTTLV ALQRK +KV++VST+ + P+M +D LRRQAD+F+DL LK EI RDP E Sbjct: 119 GDGDFTTLVDALQRKGRKVSVVSTMATQPAMIADDLRRQADHFIDLMTLKAEIGRDPSER 178 Query: 181 K 181 Sbjct: 179 P 179 >gi|84500570|ref|ZP_00998819.1| hypothetical protein OB2597_11446 [Oceanicola batsensis HTCC2597] gi|84391523|gb|EAQ03855.1| hypothetical protein OB2597_11446 [Oceanicola batsensis HTCC2597] Length = 190 Score = 260 bits (666), Expect = 5e-68, Method: Composition-based stats. Identities = 95/181 (52%), Positives = 137/181 (75%), Gaps = 2/181 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + E + Sbjct: 1 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFMRRGKLLRAFYYTALLENDE--Y 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLHYNGFTMVTKPAKEYTDSQGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F LV +LQR+ +V++VST+ S P M +D+LRRQAD F++L L++ I R P E Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMIADELRRQADNFIELDDLRDVIGRPPRET 178 Query: 181 K 181 + Sbjct: 179 Q 179 >gi|325292407|ref|YP_004278271.1| hypothetical protein AGROH133_05017 [Agrobacterium sp. H13-3] gi|325060260|gb|ADY63951.1| hypothetical protein AGROH133_05017 [Agrobacterium sp. H13-3] Length = 189 Score = 260 bits (666), Expect = 5e-68, Method: Composition-based stats. Identities = 118/181 (65%), Positives = 150/181 (82%), Gaps = 2/181 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R ++RAYYYT ++ D Q++ Sbjct: 1 MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K AKEFT+ GR+++K +MD+ELAVDA EQSE ++HLV+FS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPAKEFTDALGRRKIKGNMDIELAVDAMEQSETVDHLVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG FT LV ALQRK +KV++VST+ + P+M +D LRRQAD+F+DL LK EI RDP+E Sbjct: 119 GDGDFTKLVDALQRKGRKVSVVSTMATQPAMIADDLRRQADHFIDLMTLKAEIGRDPNER 178 Query: 181 K 181 Sbjct: 179 P 179 >gi|56698038|ref|YP_168409.1| hypothetical protein SPO3206 [Ruegeria pomeroyi DSS-3] gi|56679775|gb|AAV96441.1| conserved hypothetical protein [Ruegeria pomeroyi DSS-3] Length = 190 Score = 260 bits (666), Expect = 5e-68, Method: Composition-based stats. Identities = 97/179 (54%), Positives = 136/179 (75%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + E + Sbjct: 1 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFMRRGKMLRAFYYTALLENDE--Y 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLHYNGFTMVTKPAKEYTDSMGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F LVA+LQR+ +V++VST+ S P M SD+LRRQAD F++L L+ I R P E Sbjct: 119 GDGDFRPLVASLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELEELREVIGRPPRE 177 >gi|315122349|ref|YP_004062838.1| hypothetical protein CKC_03005 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495751|gb|ADR52350.1| hypothetical protein CKC_03005 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 205 Score = 260 bits (665), Expect = 6e-68, Method: Composition-based stats. Identities = 150/179 (83%), Positives = 169/179 (94%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFDPREKIALFIDGANLYA+SKALGFDIDYRKLLKAF++RA V+RAYYYTTV+GD +QQ+ Sbjct: 1 MFDPREKIALFIDGANLYAASKALGFDIDYRKLLKAFKARARVLRAYYYTTVLGDSDQQY 60 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SPLHPLLDWLHYNGF+VV+KVAKEFTE+CGRK++K+SMDVELAVDAFEQSEG++HLVIFS Sbjct: 61 SPLHPLLDWLHYNGFKVVSKVAKEFTESCGRKKIKASMDVELAVDAFEQSEGIDHLVIFS 120 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F TLV ALQRK KKVTIVSTVLS+PSM SDQLRRQAD+F+DLAYLKNEI R+ E Sbjct: 121 GDGDFATLVEALQRKSKKVTIVSTVLSNPSMVSDQLRRQADHFIDLAYLKNEIQRESCE 179 >gi|116251270|ref|YP_767108.1| hypothetical protein RL1504 [Rhizobium leguminosarum bv. viciae 3841] gi|115255918|emb|CAK06999.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae 3841] Length = 193 Score = 260 bits (665), Expect = 6e-68, Method: Composition-based stats. Identities = 116/179 (64%), Positives = 149/179 (83%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R ++RAYYYT ++ D Q++ Sbjct: 1 MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+ELA+DA EQSE ++HLVIFS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPAKEFTDSMGRRKIKGNMDIELAIDAMEQSETVDHLVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG FT LV ALQR+ +KV+++ST+ + P M +D LRRQAD+F+DL LK EI RDP E Sbjct: 119 GDGDFTNLVEALQRRGRKVSVISTMATQPPMIADDLRRQADHFIDLLSLKAEIGRDPSE 177 >gi|241203882|ref|YP_002974978.1| hypothetical protein Rleg_1144 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240857772|gb|ACS55439.1| protein of unknown function DUF88 [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 193 Score = 260 bits (665), Expect = 6e-68, Method: Composition-based stats. Identities = 116/179 (64%), Positives = 149/179 (83%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R ++RAYYYT ++ D Q++ Sbjct: 1 MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+ELA+DA EQSE ++HLVIFS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPAKEFTDSMGRRKIKGNMDIELAIDAMEQSETVDHLVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG FT LV ALQR+ +KV+++ST+ + P M +D LRRQAD+F+DL LK EI RDP E Sbjct: 119 GDGDFTNLVEALQRRGRKVSVISTMATQPPMIADDLRRQADHFIDLLSLKAEIGRDPSE 177 >gi|89070109|ref|ZP_01157439.1| hypothetical protein OG2516_09048 [Oceanicola granulosus HTCC2516] gi|89044330|gb|EAR50473.1| hypothetical protein OG2516_09048 [Oceanicola granulosus HTCC2516] Length = 193 Score = 260 bits (665), Expect = 7e-68, Method: Composition-based stats. Identities = 95/181 (52%), Positives = 136/181 (75%), Gaps = 2/181 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++K+LGFDIDY+ L + F R ++RA+YYT ++ + + + Sbjct: 1 MFYRDERLALFIDGSNLYAAAKSLGFDIDYKLLRQEFMRRGKLLRAFYYTALLENDD--Y 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNGF +V K AKEFT++ GR++VK +MD+EL VDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLHYNGFTMVTKPAKEFTDSQGRRKVKGNMDIELTVDAMEIASHVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F LV ALQRK +V++ ST+ S P M +D+LRRQAD F++L L+ + R P ED Sbjct: 119 GDGDFRPLVEALQRKGVRVSVCSTIRSQPPMIADELRRQADNFIELDELREVVGRPPRED 178 Query: 181 K 181 + Sbjct: 179 R 179 >gi|126739732|ref|ZP_01755424.1| hypothetical protein RSK20926_05732 [Roseobacter sp. SK209-2-6] gi|126719378|gb|EBA16088.1| hypothetical protein RSK20926_05732 [Roseobacter sp. SK209-2-6] Length = 190 Score = 260 bits (665), Expect = 7e-68, Method: Composition-based stats. Identities = 95/181 (52%), Positives = 138/181 (76%), Gaps = 2/181 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++K+LGFDIDY+ L + F R ++RA+YYT ++ + E + Sbjct: 1 MFYKDERLALFIDGSNLYAAAKSLGFDIDYKLLRQEFMRRGKLLRAFYYTALLENDE--Y 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLHYNGFTMVTKPAKEYTDSMGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F L+A+LQR+ +V++VST+ S P M SD+LRRQAD F++L LK+ I R P ++ Sbjct: 119 GDGDFRPLIASLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELEELKDVIGRPPRDN 178 Query: 181 K 181 Sbjct: 179 P 179 >gi|86137266|ref|ZP_01055844.1| hypothetical protein MED193_16367 [Roseobacter sp. MED193] gi|85826590|gb|EAQ46787.1| hypothetical protein MED193_16367 [Roseobacter sp. MED193] Length = 190 Score = 260 bits (664), Expect = 7e-68, Method: Composition-based stats. Identities = 98/181 (54%), Positives = 138/181 (76%), Gaps = 2/181 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + E + Sbjct: 1 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFMRRGKLLRAFYYTALLENDE--Y 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+ELAVDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLHYNGFTMVTKPAKEYTDSMGRRKVKGNMDIELAVDAMELAPRVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F L+A+LQR+ +V++VST+ S P M SD+LRRQAD F++L LK+ I R P E Sbjct: 119 GDGDFRPLIASLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELEELKDVIGRPPREH 178 Query: 181 K 181 Sbjct: 179 P 179 >gi|254504996|ref|ZP_05117147.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11] gi|222441067|gb|EEE47746.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11] Length = 196 Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats. Identities = 105/182 (57%), Positives = 146/182 (80%), Gaps = 2/182 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFD REK+ALFIDGANLY+++KA+GFDIDY++LLK F+ +A ++RAYYYT ++ D Q++ Sbjct: 1 MFDAREKVALFIDGANLYSTAKAIGFDIDYKRLLKEFQGQAYLLRAYYYTALIED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++V+ K KEF ++ GR++VK +MD+ELAVDA E E ++H+V+FS Sbjct: 59 SSIRPLIDWLDYNGYKVITKPVKEFVDSAGRRKVKGNMDIELAVDAMELVESVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F +LV ALQRK +KV++VST+ + P M +D LRRQAD+F+DLA L N+I RDP E Sbjct: 119 GDGDFRSLVEALQRKGRKVSVVSTLKTQPPMIADDLRRQADHFIDLASLANKIGRDPSER 178 Query: 181 KK 182 + Sbjct: 179 PQ 180 >gi|83951635|ref|ZP_00960367.1| hypothetical protein ISM_13770 [Roseovarius nubinhibens ISM] gi|83836641|gb|EAP75938.1| hypothetical protein ISM_13770 [Roseovarius nubinhibens ISM] Length = 191 Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats. Identities = 97/180 (53%), Positives = 136/180 (75%), Gaps = 2/180 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA+ KALGFDIDY+ L F R ++RA+YYT ++ + E + Sbjct: 1 MFYKDERLALFIDGSNLYAAGKALGFDIDYKLLRSEFMRRGKLLRAFYYTALLENDE--Y 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+ELAVDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLHYNGFSMVTKPAKEYTDSQGRRKVKGNMDIELAVDAMELAPHVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F LV +LQR+ +V++VST+ S P M SD+LRRQAD F++L LK+ I R P ++ Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELDDLKDVIGRPPRDN 178 >gi|86357021|ref|YP_468913.1| hypothetical protein RHE_CH01383 [Rhizobium etli CFN 42] gi|86281123|gb|ABC90186.1| hypothetical conserved protein [Rhizobium etli CFN 42] Length = 193 Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats. Identities = 116/179 (64%), Positives = 149/179 (83%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R ++RAYYYT ++ D Q++ Sbjct: 1 MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+ELA+DA EQSE ++HLVIFS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPAKEFTDSMGRRKIKGNMDIELAIDAMEQSETVDHLVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG FT LV ALQR+ +KV+++ST+ + P M +D LRRQAD+F+DL LK EI RDP E Sbjct: 119 GDGDFTNLVEALQRRGRKVSVISTMATQPPMIADDLRRQADHFIDLLSLKAEIGRDPAE 177 >gi|209548594|ref|YP_002280511.1| hypothetical protein Rleg2_0991 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209534350|gb|ACI54285.1| protein of unknown function DUF88 [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 195 Score = 259 bits (662), Expect = 1e-67, Method: Composition-based stats. Identities = 116/179 (64%), Positives = 149/179 (83%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R ++RAYYYT ++ D Q++ Sbjct: 1 MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+ELA+DA EQSE ++HLVIFS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPAKEFTDSMGRRKIKGNMDIELAIDAMEQSETVDHLVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG FT LV ALQR+ +KV+++ST+ + P M +D LRRQAD+F+DL LK EI RDP E Sbjct: 119 GDGDFTNLVEALQRRGRKVSVISTMSTQPPMIADDLRRQADHFIDLLSLKAEIGRDPAE 177 >gi|84684017|ref|ZP_01011919.1| hypothetical protein 1099457000262_RB2654_16251 [Maritimibacter alkaliphilus HTCC2654] gi|84667770|gb|EAQ14238.1| hypothetical protein RB2654_16251 [Rhodobacterales bacterium HTCC2654] Length = 191 Score = 259 bits (662), Expect = 1e-67, Method: Composition-based stats. Identities = 96/181 (53%), Positives = 136/181 (75%), Gaps = 2/181 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++K+LGFDIDY+ L + F R ++RA+YYT ++ + + + Sbjct: 1 MFYKDERLALFIDGSNLYAAAKSLGFDIDYKLLRQEFMRRGKLLRAFYYTALLENDD--Y 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNGF +V K AKEFT++ GR++VK +MD+EL VDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLHYNGFTMVTKPAKEFTDSMGRRKVKGNMDIELTVDAMEIAPHVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F LV LQRK +V++VST+ S P M +D+LRRQAD F++L LK I R P +D Sbjct: 119 GDGDFRPLVEGLQRKGVRVSVVSTIRSQPPMIADELRRQADNFIELDELKEVIGRPPRDD 178 Query: 181 K 181 + Sbjct: 179 R 179 >gi|254511909|ref|ZP_05123976.1| hypothetical protein RKLH11_2451 [Rhodobacteraceae bacterium KLH11] gi|221535620|gb|EEE38608.1| hypothetical protein RKLH11_2451 [Rhodobacteraceae bacterium KLH11] Length = 191 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 96/179 (53%), Positives = 137/179 (76%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + E + Sbjct: 1 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFMRRGKLLRAFYYTALLENDE--Y 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLHYNGFTMVTKPAKEYTDSMGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F L+A+LQR+ +V++VST+ S P M SD+LRRQAD F++L L++ I R P E Sbjct: 119 GDGDFRPLIASLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELEDLRDVIGRPPRE 177 >gi|163738230|ref|ZP_02145646.1| hypothetical protein RGBS107_07449 [Phaeobacter gallaeciensis BS107] gi|163740168|ref|ZP_02147562.1| hypothetical protein RG210_08712 [Phaeobacter gallaeciensis 2.10] gi|161386026|gb|EDQ10401.1| hypothetical protein RG210_08712 [Phaeobacter gallaeciensis 2.10] gi|161388846|gb|EDQ13199.1| hypothetical protein RGBS107_07449 [Phaeobacter gallaeciensis BS107] Length = 189 Score = 258 bits (661), Expect = 2e-67, Method: Composition-based stats. Identities = 97/180 (53%), Positives = 137/180 (76%), Gaps = 2/180 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + E + Sbjct: 1 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFMRRGKLLRAFYYTALLENDE--Y 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLHYNGFTMVTKPAKEYTDSMGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F L+A+LQR+ +V++VST+ S P M SD+LRRQAD F++L LK+ I R P E Sbjct: 119 GDGDFRPLIASLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELEELKDVIGRPPREQ 178 >gi|83593194|ref|YP_426946.1| hypothetical protein Rru_A1859 [Rhodospirillum rubrum ATCC 11170] gi|83576108|gb|ABC22659.1| Protein of unknown function DUF88 [Rhodospirillum rubrum ATCC 11170] Length = 214 Score = 258 bits (661), Expect = 2e-67, Method: Composition-based stats. Identities = 98/183 (53%), Positives = 138/183 (75%), Gaps = 4/183 (2%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 +F P+E+I LFIDG+NLYA+++ALGFDIDY++LL+ F ++ +IRA+YYT +V D Q++ Sbjct: 2 IFYPQERIGLFIDGSNLYAAARALGFDIDYKRLLELFAAKGRLIRAFYYTALVED--QEY 59 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWL YNG+ +V K KEFT+ GR+++K +MD+ELA+D E + L+H+V+FS Sbjct: 60 SPIRPLVDWLDYNGYTMVTKPTKEFTDATGRRKIKGNMDIELAIDVMEMAPHLDHIVLFS 119 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP--D 178 GDG F LV A+QRK +VT+VSTV S P M +D+LRRQAD F++L L+ IAR P Sbjct: 120 GDGDFRRLVDAVQRKGLRVTVVSTVRSQPPMVADELRRQADTFIELLDLEPSIARAPLHR 179 Query: 179 EDK 181 E Sbjct: 180 EPP 182 >gi|163733871|ref|ZP_02141313.1| hypothetical protein RLO149_06148 [Roseobacter litoralis Och 149] gi|161392982|gb|EDQ17309.1| hypothetical protein RLO149_06148 [Roseobacter litoralis Och 149] Length = 182 Score = 258 bits (661), Expect = 2e-67, Method: Composition-based stats. Identities = 95/179 (53%), Positives = 136/179 (75%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++K+LGFDIDY+ L + F R ++RA+YYT ++ + E + Sbjct: 1 MFYKDERLALFIDGSNLYAAAKSLGFDIDYKLLRQEFMRRGKLLRAFYYTALLENDE--Y 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWL+YNGF +V K AKE+T++ GR++VK +MD+ELAVDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLNYNGFTMVTKPAKEYTDSMGRRKVKGNMDIELAVDAMELAPRVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F L+ +LQR +V++VST+ S P M SD+LRRQAD F++L LK+ I R P E Sbjct: 119 GDGDFRPLIESLQRSGVRVSVVSTIRSQPPMISDELRRQADNFIELDELKDVIGRPPRE 177 >gi|218678619|ref|ZP_03526516.1| hypothetical protein RetlC8_06939 [Rhizobium etli CIAT 894] Length = 193 Score = 258 bits (661), Expect = 2e-67, Method: Composition-based stats. Identities = 116/179 (64%), Positives = 149/179 (83%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R ++RAYYYT ++ D Q++ Sbjct: 1 MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+ELA+DA EQSE ++HLVIFS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPAKEFTDSMGRRKIKGNMDIELAIDAMEQSETVDHLVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG FT LV ALQR+ +KV+++ST+ + P M +D LRRQAD+F+DL LK EI RDP E Sbjct: 119 GDGDFTNLVEALQRRGRKVSVISTMATQPPMIADDLRRQADHFIDLLSLKAEIGRDPAE 177 >gi|222085384|ref|YP_002543914.1| hypothetical protein Arad_1584 [Agrobacterium radiobacter K84] gi|221722832|gb|ACM25988.1| conserved hypothetical protein [Agrobacterium radiobacter K84] Length = 194 Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats. Identities = 116/182 (63%), Positives = 151/182 (82%), Gaps = 2/182 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R ++RAYYYT ++ D Q++ Sbjct: 1 MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+ELA+DA EQSE ++HLVIFS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPAKEFTDSMGRRKIKGNMDIELAIDAMEQSETVDHLVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG FTTLV ALQR+ +KV+++ST+ + P M +D LRRQAD+F+DL LK EI RDP + Sbjct: 119 GDGDFTTLVEALQRRGRKVSVISTMATQPPMIADDLRRQADHFIDLVSLKAEIGRDPSDR 178 Query: 181 KK 182 + Sbjct: 179 PQ 180 >gi|254453678|ref|ZP_05067115.1| DUF88 [Octadecabacter antarcticus 238] gi|198268084|gb|EDY92354.1| DUF88 [Octadecabacter antarcticus 238] Length = 194 Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats. Identities = 96/182 (52%), Positives = 135/182 (74%), Gaps = 2/182 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF EK+ALFIDG+NLYA++KALGFDIDY+ L F R ++RA+YYT ++ + E + Sbjct: 1 MFYRDEKLALFIDGSNLYAAAKALGFDIDYKLLRSEFMRRGKMLRAFYYTALLENDE--Y 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWL+YNGF +V K AKEFT++ GR+++K +MD+ELAVDA E + ++H+VIFS Sbjct: 59 SPIRPLVDWLNYNGFTMVTKPAKEFTDSMGRRKIKGNMDIELAVDALELAPHVDHIVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F LV +LQRK +V++VST+ S P M +D+LRRQ D F++L L++ I R E Sbjct: 119 GDGDFRPLVESLQRKGVRVSVVSTIRSQPPMIADELRRQCDNFIELDELRDVIGRPTREA 178 Query: 181 KK 182 + Sbjct: 179 PR 180 >gi|227819053|ref|YP_002823024.1| hypothetical protein NGR_b08150 [Sinorhizobium fredii NGR234] gi|227338052|gb|ACP22271.1| conserved hypothetical protein [Sinorhizobium fredii NGR234] Length = 194 Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats. Identities = 119/179 (66%), Positives = 149/179 (83%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFDPREKIALFIDGANL+A+SK LGFDIDYRKLL+AFRSRA ++RAYYYT ++ D E F Sbjct: 1 MFDPREKIALFIDGANLFATSKTLGFDIDYRKLLEAFRSRAYLLRAYYYTALIEDLE--F 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG+ VV K AKEFT++ GR+++K SMD+ELA+DA E S+ ++H VIFS Sbjct: 59 SSIRPLIDWLDYNGYTVVTKPAKEFTDSQGRRKIKGSMDIELAIDAMEHSQTVDHFVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG FT LV ALQRK +KV++VST+L+ P M +DQLRRQAD+F+DLA L++EI R P E Sbjct: 119 GDGDFTPLVEALQRKGRKVSVVSTILTQPPMIADQLRRQADHFIDLATLRSEIGRHPRE 177 >gi|99082408|ref|YP_614562.1| hypothetical protein TM1040_2568 [Ruegeria sp. TM1040] gi|99038688|gb|ABF65300.1| protein of unknown function DUF88 [Ruegeria sp. TM1040] Length = 189 Score = 258 bits (659), Expect = 3e-67, Method: Composition-based stats. Identities = 97/179 (54%), Positives = 137/179 (76%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYAS+KALGFDIDY+ L + F R ++RA+YYT ++ + E + Sbjct: 1 MFYKDERLALFIDGSNLYASAKALGFDIDYKLLRQEFMRRGKLVRAFYYTALLENDE--Y 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLHYNGFSMVTKPAKEYTDSMGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F L+A+LQR+ +V++VST+ S P M SD+LRRQAD F++L L++ I R P E Sbjct: 119 GDGDFRPLIASLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELEELRDVIGRPPRE 177 >gi|149913459|ref|ZP_01901992.1| hypothetical protein RAZWK3B_09161 [Roseobacter sp. AzwK-3b] gi|149812579|gb|EDM72408.1| hypothetical protein RAZWK3B_09161 [Roseobacter sp. AzwK-3b] Length = 190 Score = 258 bits (659), Expect = 3e-67, Method: Composition-based stats. Identities = 94/180 (52%), Positives = 135/180 (75%), Gaps = 2/180 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA+++ALGFDIDY+ L F R ++RA+YYT ++ + E + Sbjct: 1 MFYKDERLALFIDGSNLYAAARALGFDIDYKLLRAEFMRRGKLLRAFYYTAMLENDE--Y 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWL+YNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLNYNGFSMVTKPAKEYTDSQGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F LV +LQR+ +V++VST+ S P M SD+LRRQAD F++L LK+ I R P + Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELDDLKDVIGRPPRDP 178 >gi|255263963|ref|ZP_05343305.1| hypothetical protein TR2A62_2961 [Thalassiobium sp. R2A62] gi|255106298|gb|EET48972.1| hypothetical protein TR2A62_2961 [Thalassiobium sp. R2A62] Length = 192 Score = 258 bits (659), Expect = 3e-67, Method: Composition-based stats. Identities = 96/179 (53%), Positives = 136/179 (75%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++KALGFDIDY+ L F R ++RA+YYT ++ + E + Sbjct: 1 MFYRDERLALFIDGSNLYAAAKALGFDIDYKLLRTEFMRRGKMLRAFYYTALLENDE--Y 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWL+YNGF +V K AKEFT++ GR+++K +MD+ELAVDA E + ++H+VIFS Sbjct: 59 SPIRPLVDWLNYNGFTMVTKPAKEFTDSIGRRKIKGNMDIELAVDAMELAPHVDHIVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F LV A+QRK +V++VST+ S P M +D+LRRQAD F++L L++ + R P E Sbjct: 119 GDGDFRPLVEAIQRKGVRVSVVSTIRSQPPMIADELRRQADNFIELDELRDVVGRPPRE 177 >gi|83855035|ref|ZP_00948565.1| hypothetical protein NAS141_09906 [Sulfitobacter sp. NAS-14.1] gi|83941558|ref|ZP_00954020.1| hypothetical protein EE36_04978 [Sulfitobacter sp. EE-36] gi|83842878|gb|EAP82045.1| hypothetical protein NAS141_09906 [Sulfitobacter sp. NAS-14.1] gi|83847378|gb|EAP85253.1| hypothetical protein EE36_04978 [Sulfitobacter sp. EE-36] Length = 181 Score = 258 bits (659), Expect = 3e-67, Method: Composition-based stats. Identities = 96/179 (53%), Positives = 135/179 (75%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++K LGFDIDY+ L + F R ++RA+YYT ++ + E + Sbjct: 1 MFYKDERLALFIDGSNLYAAAKNLGFDIDYKLLRQEFMRRGKLLRAFYYTALLENDE--Y 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWL+YNGF +V K AKE+T++ GR++VK +MD+ELAVDA E + L+H+VIFS Sbjct: 59 SPIRPLVDWLNYNGFSMVTKPAKEYTDSMGRRKVKGNMDIELAVDAMELAPHLDHIVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F LV +LQR+ +V++VST+ S P M SD+LRRQ D F++L L++ I R P E Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMISDELRRQVDNFIELEDLRDVIGRPPRE 177 >gi|254469949|ref|ZP_05083354.1| DUF88 [Pseudovibrio sp. JE062] gi|211961784|gb|EEA96979.1| DUF88 [Pseudovibrio sp. JE062] Length = 194 Score = 258 bits (659), Expect = 4e-67, Method: Composition-based stats. Identities = 101/181 (55%), Positives = 145/181 (80%), Gaps = 2/181 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFDPREKIALFIDGANLY+++KA+GFDIDY++LLK F+S+ ++RAYYYT +V EQ++ Sbjct: 1 MFDPREKIALFIDGANLYSTAKAIGFDIDYKRLLKEFQSKGYLLRAYYYTALVE--EQEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K KEF ++ GR+++K +MD+ELAVDA + + ++H+V+FS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPVKEFVDSAGRRKIKGNMDIELAVDAMQLIDHVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F +LV ALQR+ +KV++VST+ + P M +D LRRQAD+F++L+ L + RDP+E Sbjct: 119 GDGDFRSLVEALQRRGRKVSVVSTLQTQPPMIADDLRRQADHFIELSTLMQRVGRDPNER 178 Query: 181 K 181 Sbjct: 179 P 179 >gi|110678677|ref|YP_681684.1| hypothetical protein RD1_1356 [Roseobacter denitrificans OCh 114] gi|109454793|gb|ABG30998.1| conserved hypothetical protein [Roseobacter denitrificans OCh 114] Length = 182 Score = 258 bits (659), Expect = 4e-67, Method: Composition-based stats. Identities = 94/179 (52%), Positives = 135/179 (75%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++K+LGFDIDY+ L + F R ++RA+YYT ++ + E + Sbjct: 1 MFYKDERLALFIDGSNLYAAAKSLGFDIDYKLLRQEFMRRGKLLRAFYYTALLENDE--Y 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWL+YNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLNYNGFTMVTKPAKEYTDSMGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F L+ +LQR +V++VST+ S P M SD+LRRQAD F++L LK+ I R P E Sbjct: 119 GDGDFRPLIESLQRSGVRVSVVSTIRSQPPMISDELRRQADNFIELDELKDVIGRPPRE 177 >gi|260576279|ref|ZP_05844271.1| protein of unknown function DUF88 [Rhodobacter sp. SW2] gi|259021547|gb|EEW24851.1| protein of unknown function DUF88 [Rhodobacter sp. SW2] Length = 190 Score = 256 bits (655), Expect = 8e-67, Method: Composition-based stats. Identities = 94/181 (51%), Positives = 137/181 (75%), Gaps = 2/181 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF +++ALFIDG+NLYA++KALGFDIDYR L + F R ++RA+YYT ++ + E + Sbjct: 1 MFYKDDRLALFIDGSNLYAAAKALGFDIDYRLLRQEFMRRGKLLRAFYYTALLENDE--Y 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL V+A E + ++H+V+FS Sbjct: 59 SPIRPLVDWLHYNGFSMVTKPAKEYTDSQGRRKVKGNMDIELTVNAMELAPHVDHVVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F LV +LQR+ +V++VST+ S P M +D+LRRQAD F++L L++ I R P E Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMIADELRRQADNFIELDELRDVIGRPPREP 178 Query: 181 K 181 + Sbjct: 179 R 179 >gi|85705102|ref|ZP_01036202.1| hypothetical protein ROS217_04305 [Roseovarius sp. 217] gi|85670424|gb|EAQ25285.1| hypothetical protein ROS217_04305 [Roseovarius sp. 217] Length = 190 Score = 256 bits (655), Expect = 9e-67, Method: Composition-based stats. Identities = 96/179 (53%), Positives = 135/179 (75%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA+ KALGFDIDY+ L F R ++RA+YYT ++ + E + Sbjct: 1 MFYKDERLALFIDGSNLYAAGKALGFDIDYKLLRSEFMRRGKLLRAFYYTALLENDE--Y 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNG+ +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLHYNGYSMVTKPAKEYTDSQGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F LV +LQR+ +V++VST+ S P M SD+LRRQAD F++LA LK+ I R P + Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELADLKDVIGRPPRD 177 >gi|163760601|ref|ZP_02167682.1| hypothetical protein HPDFL43_11921 [Hoeflea phototrophica DFL-43] gi|162282216|gb|EDQ32506.1| hypothetical protein HPDFL43_11921 [Hoeflea phototrophica DFL-43] Length = 196 Score = 256 bits (655), Expect = 9e-67, Method: Composition-based stats. Identities = 115/182 (63%), Positives = 151/182 (82%), Gaps = 2/182 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFDPREKIALFIDGANLYA+SK+L FDIDYRKLLK+F+ R ++RAYYYT ++ D Q++ Sbjct: 1 MFDPREKIALFIDGANLYAASKSLNFDIDYRKLLKSFQGRGYLLRAYYYTALIED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K AKEFT++ GR++VK +MD+ELA+DA EQ+E ++HLVIFS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPAKEFTDSMGRRKVKGNMDIELAIDAMEQAEVVDHLVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG FT+LV ALQRK +KVT+VS++ + P M +D LRRQADYF+DL+ LK+EI R+ E Sbjct: 119 GDGDFTSLVEALQRKGRKVTVVSSLSTQPPMIADDLRRQADYFLDLSTLKSEIGRESSER 178 Query: 181 KK 182 + Sbjct: 179 PQ 180 >gi|260432747|ref|ZP_05786718.1| RtsE [Silicibacter lacuscaerulensis ITI-1157] gi|260416575|gb|EEX09834.1| RtsE [Silicibacter lacuscaerulensis ITI-1157] Length = 190 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 95/179 (53%), Positives = 137/179 (76%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + E + Sbjct: 1 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFMRRGKLLRAFYYTALLENDE--Y 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWL+YNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLNYNGFTMVTKPAKEYTDSMGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F L+A+LQR+ +V++VST+ S P M SD+LRRQAD F++L L++ I R P E Sbjct: 119 GDGDFRPLIASLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELDDLRDVIGRPPRE 177 >gi|254465558|ref|ZP_05078969.1| hypothetical protein RBY4I_2165 [Rhodobacterales bacterium Y4I] gi|206686466|gb|EDZ46948.1| hypothetical protein RBY4I_2165 [Rhodobacterales bacterium Y4I] Length = 189 Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 96/180 (53%), Positives = 136/180 (75%), Gaps = 2/180 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + E + Sbjct: 1 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFMRRGKLLRAFYYTALLENDE--Y 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLHYNGFTMVTKPAKEYTDSLGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F L+A+LQR+ +V++VST+ S P M SD LRRQAD F++L L++ I R P E Sbjct: 119 GDGDFRPLIASLQRQGVRVSVVSTIRSQPPMISDDLRRQADNFIELEELRDVIGRPPREQ 178 >gi|307946592|ref|ZP_07661927.1| RtsE [Roseibium sp. TrichSKD4] gi|307770256|gb|EFO29482.1| RtsE [Roseibium sp. TrichSKD4] Length = 194 Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 104/181 (57%), Positives = 146/181 (80%), Gaps = 2/181 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFD REK+ALFIDGANLY+++KA+GFDIDY++LLK F+ +A ++RAYYYT ++ D Q++ Sbjct: 1 MFDAREKVALFIDGANLYSTAKAIGFDIDYKRLLKEFQGQAYLLRAYYYTALIED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++V+ K KEF ++ GR++VK +MD+ELAVDA +Q E ++H+V+FS Sbjct: 59 SSIRPLIDWLDYNGYKVITKPVKEFVDSTGRRKVKGNMDIELAVDAMQQVEHVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F +LV ALQR+ +KV++VST+ + P M +D LRRQAD+F+DLA L N+I RDP E Sbjct: 119 GDGDFRSLVEALQRRGRKVSVVSTLKTQPPMIADDLRRQADHFIDLASLANKIGRDPSER 178 Query: 181 K 181 Sbjct: 179 P 179 >gi|170748311|ref|YP_001754571.1| hypothetical protein Mrad2831_1893 [Methylobacterium radiotolerans JCM 2831] gi|170654833|gb|ACB23888.1| protein of unknown function DUF88 [Methylobacterium radiotolerans JCM 2831] Length = 213 Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 97/177 (54%), Positives = 138/177 (77%), Gaps = 2/177 (1%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 ++ A+FIDGANLYA++KALGFDIDY+KLLK F+SR ++RA+YYT ++ D Q++S + Sbjct: 4 TQRSAIFIDGANLYATTKALGFDIDYKKLLKEFQSRENLLRAFYYTAMIED--QEYSSIR 61 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 PL+DWL YNG++VV K KEFT++ GR++ K +MD+ELA+DA E S ++H+++FSGDG Sbjct: 62 PLIDWLDYNGYRVVTKPVKEFTDSMGRRKYKGNMDIELAIDALELSPHIDHMILFSGDGD 121 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 F +LV A+QR+ KVT++ST+ + P+M SD+LRRQAD F+DLA L I R+P E Sbjct: 122 FRSLVEAMQRRGVKVTVISTIQTQPAMISDELRRQADEFVDLASLAGRIGREPGERP 178 >gi|126733749|ref|ZP_01749496.1| hypothetical protein RCCS2_06319 [Roseobacter sp. CCS2] gi|126716615|gb|EBA13479.1| hypothetical protein RCCS2_06319 [Roseobacter sp. CCS2] Length = 193 Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 93/181 (51%), Positives = 137/181 (75%), Gaps = 2/181 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++K+LGFDIDY+ L + F R ++RA+YYT ++ + E + Sbjct: 1 MFYRDERLALFIDGSNLYAAAKSLGFDIDYKLLRQEFMRRGKMLRAFYYTALLENDE--Y 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWL+YNGF +V K AKE+T++ GR++VK +MD+ELAVDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLNYNGFTMVTKPAKEYTDSMGRRKVKGNMDIELAVDAMELAPYVDHVVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F LV +LQRK +V++VST+ S P M +D+LRRQAD F++L L++ + R E Sbjct: 119 GDGDFRPLVESLQRKGVRVSVVSTIRSQPPMIADELRRQADNFIELDELRDVVGRPTREP 178 Query: 181 K 181 + Sbjct: 179 R 179 >gi|254460504|ref|ZP_05073920.1| hypothetical protein RB2083_1094 [Rhodobacterales bacterium HTCC2083] gi|206677093|gb|EDZ41580.1| hypothetical protein RB2083_1094 [Rhodobacteraceae bacterium HTCC2083] Length = 190 Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 95/182 (52%), Positives = 135/182 (74%), Gaps = 2/182 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG NLYA++KALGFDIDY+ L F R ++RA+YYT ++ + E + Sbjct: 1 MFYKDERLALFIDGLNLYAAAKALGFDIDYKLLRTEFMRRGKMLRAFYYTALLENDE--Y 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWL+YNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLNYNGFTMVTKQAKEYTDSQGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F LV +LQR+ +V++VST+ S P M SD+LRRQAD F++L LK+ + R P E Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELDELKDVLGRPPREP 178 Query: 181 KK 182 + Sbjct: 179 ME 180 >gi|259417563|ref|ZP_05741482.1| hypothetical protein SCH4B_2747 [Silicibacter sp. TrichCH4B] gi|259346469|gb|EEW58283.1| hypothetical protein SCH4B_2747 [Silicibacter sp. TrichCH4B] Length = 189 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 96/179 (53%), Positives = 137/179 (76%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYAS+KALGFDIDY+ L + F R ++RA+YYT ++ + E + Sbjct: 1 MFYKDERLALFIDGSNLYASAKALGFDIDYKLLRQEFMRRGKLVRAFYYTALLENDE--Y 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLHYNGFSMVTKPAKEYTDSMGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F L+A+LQR+ +V++VST+ S P M SD+LRRQAD F++L L++ I R P + Sbjct: 119 GDGDFRPLIASLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELEELRDVIGRPPRD 177 >gi|13476434|ref|NP_108004.1| hypothetical protein mll7752 [Mesorhizobium loti MAFF303099] gi|319784512|ref|YP_004143988.1| hypothetical protein Mesci_4829 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|14027195|dbj|BAB54149.1| mll7752 [Mesorhizobium loti MAFF303099] gi|317170400|gb|ADV13938.1| hypothetical protein Mesci_4829 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 193 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 116/181 (64%), Positives = 146/181 (80%), Gaps = 2/181 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFDPREKIALFIDGANLYA+S+ALGFDIDYRKLL +F+ R ++RAYYYT +V D Q++ Sbjct: 1 MFDPREKIALFIDGANLYATSRALGFDIDYRKLLSSFQKRGYLLRAYYYTALVED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNGF+VV K AKEFT++ GR+++K +MD+EL VDA E ++ ++H VIFS Sbjct: 59 SSIRPLIDWLDYNGFKVVTKPAKEFTDSTGRRKIKGNMDIELTVDALELADVVDHYVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F TLV ALQR+ +KV+IVST+ S P M SD LRRQAD+F+DL LKNE+ RDP E Sbjct: 119 GDGDFRTLVEALQRRGRKVSIVSTMASQPPMISDDLRRQADHFIDLTTLKNEVGRDPSER 178 Query: 181 K 181 Sbjct: 179 P 179 >gi|84515155|ref|ZP_01002518.1| hypothetical protein SKA53_13063 [Loktanella vestfoldensis SKA53] gi|84511314|gb|EAQ07768.1| hypothetical protein SKA53_13063 [Loktanella vestfoldensis SKA53] Length = 187 Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats. Identities = 96/181 (53%), Positives = 136/181 (75%), Gaps = 2/181 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA+++ALGFDIDY+ L + F R ++RA+YYT ++ + E + Sbjct: 1 MFYRDERLALFIDGSNLYAAARALGFDIDYKLLRQEFMRRGKLLRAFYYTALLENDE--Y 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNG+ ++ K AKEFT++ GR++VK +MD+ELAVDA E + L+H VIFS Sbjct: 59 SPIRPLVDWLHYNGYSMITKPAKEFTDSLGRRKVKGNMDIELAVDAMELTPYLDHAVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F L+ ALQRK +V++VST+ S P M +D+LRRQAD F++L L++ I R E Sbjct: 119 GDGDFRPLIEALQRKGVRVSVVSTIRSQPPMIADELRRQADNFIELEELRDVIGRPAREP 178 Query: 181 K 181 + Sbjct: 179 R 179 >gi|299135108|ref|ZP_07028299.1| protein of unknown function DUF88 [Afipia sp. 1NLS2] gi|298590085|gb|EFI50289.1| protein of unknown function DUF88 [Afipia sp. 1NLS2] Length = 212 Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats. Identities = 99/179 (55%), Positives = 137/179 (76%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M P KIALFIDGANLYA++K LGFDIDY++LL F++R ++RA+YYT ++ D Q++ Sbjct: 1 MTSPSHKIALFIDGANLYATAKTLGFDIDYKRLLLEFQNRGTLVRAFYYTAIIED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++H+V+FS Sbjct: 59 SSIRPLIDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHIDHMVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F +LV A+QR+ +VT+VST+ S P M +D+LRRQAD F DL L++++ RDP E Sbjct: 119 GDGDFRSLVEAVQRRGVRVTVVSTISSQPPMIADELRRQADVFTDLVQLQSKLGRDPGE 177 >gi|126726103|ref|ZP_01741945.1| hypothetical protein RB2150_07843 [Rhodobacterales bacterium HTCC2150] gi|126705307|gb|EBA04398.1| hypothetical protein RB2150_07843 [Rhodobacterales bacterium HTCC2150] Length = 191 Score = 254 bits (650), Expect = 4e-66, Method: Composition-based stats. Identities = 94/182 (51%), Positives = 138/182 (75%), Gaps = 2/182 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++K+LGFDIDY+ L F R ++RA+YYT ++ + E + Sbjct: 1 MFYRDERLALFIDGSNLYAAAKSLGFDIDYKLLRTEFMRRGKLLRAFYYTALLENDE--Y 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLHYNGFNMVTKPAKEYTDSQGRRKVKGNMDIELTVDALELAPHVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F ++AA+QR+ +V++VST+ S+P M SD+LRRQAD F++L LK+ + R P E Sbjct: 119 GDGDFRPMIAAVQRQGVRVSVVSTIRSNPPMISDELRRQADNFIELDELKDVVGRPPREM 178 Query: 181 KK 182 + Sbjct: 179 PE 180 >gi|149200815|ref|ZP_01877790.1| hypothetical protein RTM1035_14357 [Roseovarius sp. TM1035] gi|149145148|gb|EDM33174.1| hypothetical protein RTM1035_14357 [Roseovarius sp. TM1035] Length = 190 Score = 254 bits (650), Expect = 4e-66, Method: Composition-based stats. Identities = 96/179 (53%), Positives = 134/179 (74%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA+ KALGFDIDY+ L F R ++RA+YYT ++ + E + Sbjct: 1 MFYKDERLALFIDGSNLYAAGKALGFDIDYKLLRSEFMRRGKLLRAFYYTALLENDE--Y 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNG+ +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLHYNGYSMVTKPAKEYTDSQGRRKVKGNMDIELTVDAMELAPRVDHVVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F LV +LQR+ +V++VST+ S P M SD LRRQAD F++LA LK+ I R P + Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMISDDLRRQADNFIELADLKDVIGRPPRD 177 >gi|260462331|ref|ZP_05810539.1| protein of unknown function DUF88 [Mesorhizobium opportunistum WSM2075] gi|259031825|gb|EEW33093.1| protein of unknown function DUF88 [Mesorhizobium opportunistum WSM2075] Length = 193 Score = 254 bits (649), Expect = 4e-66, Method: Composition-based stats. Identities = 116/181 (64%), Positives = 146/181 (80%), Gaps = 2/181 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFDPREKIALFIDGANLYA+S+ALGFDIDYRKLL +F+ R ++RAYYYT +V D Q++ Sbjct: 1 MFDPREKIALFIDGANLYATSRALGFDIDYRKLLSSFQKRGYLLRAYYYTALVED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNGF+VV K AKEFT++ GR+++K +MD+EL VDA E ++ ++H VIFS Sbjct: 59 SSIRPLIDWLDYNGFKVVTKPAKEFTDSTGRRKIKGNMDIELTVDALELADVVDHYVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F TLV ALQR+ +KV+IVST+ S P M SD LRRQAD+F+DL LKNE+ RDP E Sbjct: 119 GDGDFRTLVEALQRRGRKVSIVSTMASQPPMISDDLRRQADHFIDLVTLKNEVGRDPSER 178 Query: 181 K 181 Sbjct: 179 P 179 >gi|182679399|ref|YP_001833545.1| hypothetical protein Bind_2447 [Beijerinckia indica subsp. indica ATCC 9039] gi|182635282|gb|ACB96056.1| protein of unknown function DUF88 [Beijerinckia indica subsp. indica ATCC 9039] Length = 203 Score = 254 bits (649), Expect = 4e-66, Method: Composition-based stats. Identities = 101/179 (56%), Positives = 142/179 (79%), Gaps = 3/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M P E+IALFIDGANLYA++K+LGFDIDY++LLK F+S+ +IRA+YYT +V D Q++ Sbjct: 1 MSHP-ERIALFIDGANLYATAKSLGFDIDYKRLLKEFQSKGKLIRAFYYTALVED--QEY 57 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG+ VV K KEF ++ GR++VK +MD+ELAVDA E +E L+H+V+FS Sbjct: 58 SSIRPLIDWLDYNGYSVVTKPTKEFVDSLGRRKVKGNMDIELAVDAMEMAEHLDHIVLFS 117 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F +LV A+QRK +V++VST + P+M +D+LRRQAD F+DL +L ++I R+ +E Sbjct: 118 GDGDFRSLVEAVQRKGVRVSVVSTNTTQPAMVADELRRQADEFIDLIHLASKIGREQNE 176 >gi|163744864|ref|ZP_02152224.1| hypothetical protein OIHEL45_04735 [Oceanibulbus indolifex HEL-45] gi|161381682|gb|EDQ06091.1| hypothetical protein OIHEL45_04735 [Oceanibulbus indolifex HEL-45] Length = 184 Score = 254 bits (649), Expect = 5e-66, Method: Composition-based stats. Identities = 96/180 (53%), Positives = 135/180 (75%), Gaps = 2/180 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + E + Sbjct: 1 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFMRRGKLLRAFYYTALLENDE--Y 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWL+YNGF +V K AKE+T++ GR++VK MD+ELAVDA E + ++H+VIFS Sbjct: 59 SPIRPLVDWLNYNGFSMVTKPAKEYTDSMGRRKVKGDMDIELAVDAMELAPRVDHIVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F LV +LQR+ +V++VST+ S P M SD LRRQAD F++L L++ I R P + Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMISDDLRRQADNFIELDDLRDVIGRPPRDP 178 >gi|254439991|ref|ZP_05053485.1| conserved hypothetical protein [Octadecabacter antarcticus 307] gi|198255437|gb|EDY79751.1| conserved hypothetical protein [Octadecabacter antarcticus 307] Length = 195 Score = 253 bits (647), Expect = 8e-66, Method: Composition-based stats. Identities = 97/182 (53%), Positives = 135/182 (74%), Gaps = 2/182 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF EK+ALFIDG+NLYAS+K+LGFDIDY+ L F R ++RAYYYT ++ + E + Sbjct: 1 MFYRDEKLALFIDGSNLYASAKSLGFDIDYKLLRAEFMRRGKMLRAYYYTALLENDE--Y 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWL+YNGF +V K AKEFT++ GR+++K +MD+ELAVDA E + ++H+VIFS Sbjct: 59 SPIRPLVDWLNYNGFTMVTKPAKEFTDSMGRRKIKGNMDIELAVDALELAPHVDHIVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F LV +LQRK +V++VST+ S P M +D+LRRQ D F++L L++ I R E Sbjct: 119 GDGDFRPLVESLQRKGVRVSVVSTIRSQPPMIADELRRQCDNFIELDELRDVIGRPVREA 178 Query: 181 KK 182 + Sbjct: 179 PR 180 >gi|323137551|ref|ZP_08072628.1| protein of unknown function DUF88 [Methylocystis sp. ATCC 49242] gi|322397177|gb|EFX99701.1| protein of unknown function DUF88 [Methylocystis sp. ATCC 49242] Length = 203 Score = 253 bits (647), Expect = 8e-66, Method: Composition-based stats. Identities = 96/177 (54%), Positives = 140/177 (79%), Gaps = 2/177 (1%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 E+IALFIDGANLYA++K+LGFDIDY++LL+ F+ + +IRA+YYT ++ D Q++S + P Sbjct: 5 ERIALFIDGANLYATAKSLGFDIDYKRLLREFQGKGRLIRAFYYTALIED--QEYSSIRP 62 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125 L+DWL YNG+ VV K KEF ++ GR++VK +MD+ELAVDA E +E ++H+V+FSGDG F Sbjct: 63 LIDWLDYNGYAVVTKPTKEFVDSLGRRKVKGNMDIELAVDAMEMAEHIDHMVLFSGDGDF 122 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182 +LV A+QRK +V+++ST+ + P M +D+LRRQAD F+DL +L ++I RDP E + Sbjct: 123 RSLVEAVQRKGVRVSVISTITTQPPMIADELRRQADEFIDLIHLVSKIGRDPGERAE 179 >gi|307322278|ref|ZP_07601643.1| protein of unknown function DUF88 [Sinorhizobium meliloti AK83] gi|306892060|gb|EFN22881.1| protein of unknown function DUF88 [Sinorhizobium meliloti AK83] Length = 196 Score = 253 bits (646), Expect = 9e-66, Method: Composition-based stats. Identities = 115/179 (64%), Positives = 147/179 (82%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFDPREKIALFIDGANL+A+SK+LGFDIDY KLL+AFR+RA ++RAYYYT ++ D E F Sbjct: 1 MFDPREKIALFIDGANLFAASKSLGFDIDYCKLLQAFRNRAYLLRAYYYTAIIEDLE--F 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG+ VV K AKEFT+ GR+++K +MD+ELA+DA EQS +HLVIFS Sbjct: 59 SSIRPLIDWLDYNGYTVVTKPAKEFTDAQGRRKIKGNMDIELAIDAMEQSRTADHLVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG FTTLV LQRK +KV++VST+ + P M +D+LRRQAD+F+DLA L++EI R P + Sbjct: 119 GDGDFTTLVETLQRKGRKVSVVSTMSTQPPMIADELRRQADHFIDLASLRSEIDRHPRD 177 >gi|163852608|ref|YP_001640651.1| hypothetical protein Mext_3193 [Methylobacterium extorquens PA1] gi|218531449|ref|YP_002422265.1| hypothetical protein Mchl_3517 [Methylobacterium chloromethanicum CM4] gi|254562365|ref|YP_003069460.1| hypothetical protein METDI3980 [Methylobacterium extorquens DM4] gi|163664213|gb|ABY31580.1| protein of unknown function DUF88 [Methylobacterium extorquens PA1] gi|218523752|gb|ACK84337.1| protein of unknown function DUF88 [Methylobacterium chloromethanicum CM4] gi|254269643|emb|CAX25615.1| conserved hypothethical protein (DUF88) [Methylobacterium extorquens DM4] Length = 218 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 96/177 (54%), Positives = 141/177 (79%), Gaps = 2/177 (1%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 +++ A+FIDGANLYA++KALGFDIDY++LLK F+SR +IRA+YYT ++ D Q++S Sbjct: 2 SDKQRTAVFIDGANLYATTKALGFDIDYKRLLKDFQSRDNLIRAFYYTAMIED--QEYSS 59 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122 + PL+DWL YNG++VV K KEFT++ GR+++K +MD+ELA+DA E + ++H+V+FSGD Sbjct: 60 IRPLIDWLDYNGYRVVTKPVKEFTDSAGRRKIKGNMDIELAIDALELAPHIDHMVLFSGD 119 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 G F +LV A+QR+ +V++VST+ + P+M +D LRRQAD F+DLA+L + I RDP E Sbjct: 120 GDFRSLVEAIQRRGVRVSVVSTIQTQPAMIADDLRRQADEFIDLAHLASRIGRDPSE 176 >gi|307313917|ref|ZP_07593532.1| protein of unknown function DUF88 [Sinorhizobium meliloti BL225C] gi|306899191|gb|EFN29829.1| protein of unknown function DUF88 [Sinorhizobium meliloti BL225C] Length = 196 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 115/179 (64%), Positives = 147/179 (82%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFDPREKIALFIDGANL+A+SK+LGFDIDY KLL+AFR+RA ++RAYYYT ++ D E F Sbjct: 1 MFDPREKIALFIDGANLFAASKSLGFDIDYCKLLEAFRNRAYLLRAYYYTAIIEDLE--F 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG+ VV K AKEFT+ GR+++K +MD+ELA+DA EQS +HLVIFS Sbjct: 59 SSIRPLIDWLDYNGYTVVTKPAKEFTDAQGRRKIKGNMDIELAIDAMEQSRTADHLVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG FTTLV LQRK +KV++VST+ + P M +D+LRRQAD+F+DLA L++EI R P + Sbjct: 119 GDGDFTTLVETLQRKGRKVSVVSTMSTQPPMIADELRRQADHFIDLASLRSEIDRHPRD 177 >gi|256060778|ref|ZP_05450940.1| hypothetical protein Bneo5_10505 [Brucella neotomae 5K33] gi|256369087|ref|YP_003106595.1| hypothetical protein BMI_I648 [Brucella microti CCM 4915] gi|261324768|ref|ZP_05963965.1| conserved hypothetical protein [Brucella neotomae 5K33] gi|306842086|ref|ZP_07474758.1| cytoplasmic protein [Brucella sp. BO2] gi|306845250|ref|ZP_07477826.1| cytoplasmic protein [Brucella sp. BO1] gi|255999247|gb|ACU47646.1| hypothetical protein BMI_I648 [Brucella microti CCM 4915] gi|261300748|gb|EEY04245.1| conserved hypothetical protein [Brucella neotomae 5K33] gi|306274409|gb|EFM56216.1| cytoplasmic protein [Brucella sp. BO1] gi|306287836|gb|EFM59259.1| cytoplasmic protein [Brucella sp. BO2] Length = 191 Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 114/179 (63%), Positives = 146/179 (81%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFD REKIALFIDGANLYA+SK LGFDIDYRKLLKAF+ R ++RAYYYT +V D Q++ Sbjct: 1 MFDSREKIALFIDGANLYAASKTLGFDIDYRKLLKAFQKRGYLLRAYYYTALVED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K AKEFT++ GR++VK +MD+EL VDA + ++ ++H VIFS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKAAKEFTDSTGRRKVKGNMDIELTVDAMQLTDTVDHFVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F +LV ALQRK +KV++VST+ + P+M SD+LRRQAD+F+DL LK EI RDP E Sbjct: 119 GDGDFRSLVEALQRKGRKVSVVSTLTTQPAMISDELRRQADHFIDLVSLKAEIGRDPSE 177 >gi|254780936|ref|YP_003065349.1| hypothetical protein CLIBASIA_04175 [Candidatus Liberibacter asiaticus str. psy62] gi|254040613|gb|ACT57409.1| hypothetical protein CLIBASIA_04175 [Candidatus Liberibacter asiaticus str. psy62] Length = 182 Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 182/182 (100%), Positives = 182/182 (100%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF Sbjct: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS Sbjct: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED Sbjct: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 Query: 181 KK 182 KK Sbjct: 181 KK 182 >gi|296444871|ref|ZP_06886833.1| protein of unknown function DUF88 [Methylosinus trichosporium OB3b] gi|296257539|gb|EFH04604.1| protein of unknown function DUF88 [Methylosinus trichosporium OB3b] Length = 202 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 101/182 (55%), Positives = 143/182 (78%), Gaps = 3/182 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M DP E+IALFIDGANLYA++K+LGFDIDY++LL+ F+SR +IRA+YYT ++ D Q++ Sbjct: 1 MADP-ERIALFIDGANLYATAKSLGFDIDYKRLLREFQSRGRLIRAFYYTALIED--QEY 57 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG+ VV K KEF ++ GR++VK +MD+ELAVDA E +E ++HLV+FS Sbjct: 58 SSIRPLIDWLDYNGYAVVTKPTKEFVDSLGRRKVKGNMDIELAVDAMEMAEHIDHLVLFS 117 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F +LV A+QRK +V+++ST+ + P M +D+LRRQ+D F+DL +L +I RDP E Sbjct: 118 GDGDFRSLVEAVQRKGVRVSVISTITTQPPMIADELRRQSDEFVDLIHLVGKIGRDPGER 177 Query: 181 KK 182 + Sbjct: 178 AE 179 >gi|27380178|ref|NP_771707.1| hypothetical protein blr5067 [Bradyrhizobium japonicum USDA 110] gi|27353332|dbj|BAC50332.1| blr5067 [Bradyrhizobium japonicum USDA 110] Length = 214 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 99/179 (55%), Positives = 136/179 (75%), Gaps = 2/179 (1%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 P KIALFIDGANLYA++K LGFDIDY++LLK F+SR ++RA+YYT ++ D Q++S Sbjct: 4 SPTNKIALFIDGANLYATAKTLGFDIDYKRLLKEFQSRGTLLRAFYYTAIIED--QEYSS 61 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122 + PL+DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++ +V+FSGD Sbjct: 62 IRPLIDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHIDQMVLFSGD 121 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 G F +LV A+QR+ +VT+VST+ S P M +D+LRRQAD F DL L++++ RDP E Sbjct: 122 GDFRSLVEAVQRRGVRVTVVSTIASQPPMIADELRRQADVFTDLVELQSKLGRDPSERP 180 >gi|110633298|ref|YP_673506.1| hypothetical protein Meso_0944 [Mesorhizobium sp. BNC1] gi|110284282|gb|ABG62341.1| protein of unknown function DUF88 [Chelativorans sp. BNC1] Length = 194 Score = 251 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 111/181 (61%), Positives = 146/181 (80%), Gaps = 2/181 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFDPREKIA+FIDGANLYA+S++LGFDIDYRKLL +F+ RA ++RAYYYT +V D Q++ Sbjct: 1 MFDPREKIAMFIDGANLYATSRSLGFDIDYRKLLASFQKRAYLLRAYYYTALVED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+EL +DA + ++H VIFS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPAKEFTDSTGRRKIKGNMDIELTIDALGLVDVVDHYVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F TLV ALQR+ +KV+IVST+ S P M SD+LRRQAD+F+DLA L+ E+ RDP E Sbjct: 119 GDGDFRTLVEALQRRGRKVSIVSTIQSQPPMISDELRRQADHFIDLATLQTEVGRDPSER 178 Query: 181 K 181 Sbjct: 179 P 179 >gi|62289609|ref|YP_221402.1| hypothetical protein BruAb1_0666 [Brucella abortus bv. 1 str. 9-941] gi|82699537|ref|YP_414111.1| hypothetical protein BAB1_0669 [Brucella melitensis biovar Abortus 2308] gi|189023863|ref|YP_001934631.1| hypothetical protein BAbS19_I06260 [Brucella abortus S19] gi|237815104|ref|ZP_04594102.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A] gi|254688926|ref|ZP_05152180.1| hypothetical protein Babob68_01821 [Brucella abortus bv. 6 str. 870] gi|254693408|ref|ZP_05155236.1| hypothetical protein Babob3T_01839 [Brucella abortus bv. 3 str. Tulya] gi|254697060|ref|ZP_05158888.1| hypothetical protein Babob28_04920 [Brucella abortus bv. 2 str. 86/8/59] gi|254729957|ref|ZP_05188535.1| hypothetical protein Babob42_01839 [Brucella abortus bv. 4 str. 292] gi|256257174|ref|ZP_05462710.1| hypothetical protein Babob9C_07408 [Brucella abortus bv. 9 str. C68] gi|260545634|ref|ZP_05821375.1| conserved hypothetical protein [Brucella abortus NCTC 8038] gi|260754412|ref|ZP_05866760.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870] gi|260757631|ref|ZP_05869979.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292] gi|260761458|ref|ZP_05873801.1| conserved hypothetical protein [Brucella abortus bv. 2 str. 86/8/59] gi|260883440|ref|ZP_05895054.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68] gi|261213658|ref|ZP_05927939.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya] gi|297248021|ref|ZP_06931739.1| conserved hypothetical protein [Brucella abortus bv. 5 str. B3196] gi|62195741|gb|AAX74041.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941] gi|82615638|emb|CAJ10625.1| Protein of unknown function DUF88 [Brucella melitensis biovar Abortus 2308] gi|189019435|gb|ACD72157.1| Protein of unknown function DUF88 [Brucella abortus S19] gi|237789941|gb|EEP64151.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A] gi|260097041|gb|EEW80916.1| conserved hypothetical protein [Brucella abortus NCTC 8038] gi|260667949|gb|EEX54889.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292] gi|260671890|gb|EEX58711.1| conserved hypothetical protein [Brucella abortus bv. 2 str. 86/8/59] gi|260674520|gb|EEX61341.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870] gi|260872968|gb|EEX80037.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68] gi|260915265|gb|EEX82126.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya] gi|297175190|gb|EFH34537.1| conserved hypothetical protein [Brucella abortus bv. 5 str. B3196] Length = 191 Score = 251 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 113/179 (63%), Positives = 146/179 (81%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFD REKIALFIDGANLYA+SK LGFDIDYRKLLKAF+ R ++RAYYYT +V D Q++ Sbjct: 1 MFDSREKIALFIDGANLYAASKTLGFDIDYRKLLKAFQKRGYLLRAYYYTALVED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K A+EFT++ GR++VK +MD+EL VDA + ++ ++H VIFS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKAAREFTDSTGRRKVKGNMDIELTVDAMQLTDTVDHFVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F +LV ALQRK +KV++VST+ + P+M SD+LRRQAD+F+DL LK EI RDP E Sbjct: 119 GDGDFRSLVEALQRKGRKVSVVSTLTTQPAMISDELRRQADHFIDLVSLKAEIGRDPSE 177 >gi|188582630|ref|YP_001926075.1| hypothetical protein Mpop_3389 [Methylobacterium populi BJ001] gi|179346128|gb|ACB81540.1| protein of unknown function DUF88 [Methylobacterium populi BJ001] Length = 217 Score = 251 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 97/179 (54%), Positives = 140/179 (78%), Gaps = 2/179 (1%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 +++ A+FIDGANLYA++KALGFDIDY++LLK F+SR +IRA+YYT ++ D Q++S Sbjct: 2 SDKQRTAVFIDGANLYATTKALGFDIDYKRLLKDFQSRDNLIRAFYYTAMIED--QEYSS 59 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122 + PL+DWL YNG++VV K KEFT++ GR++VK +MD+ELA+DA E + ++H+V+FSGD Sbjct: 60 IRPLIDWLDYNGYRVVTKPVKEFTDSAGRRKVKGNMDIELAIDALELAPYIDHMVLFSGD 119 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 G F +LV A+QR+ +V++VST+ + P+M +D LRRQAD F+DLA+L I RDP E Sbjct: 120 GDFRSLVEAIQRRGVRVSVVSTIQTQPAMIADDLRRQADEFIDLAHLAGRIGRDPSERP 178 >gi|146341383|ref|YP_001206431.1| hypothetical protein BRADO4470 [Bradyrhizobium sp. ORS278] gi|146194189|emb|CAL78210.1| conserved hypothetical protein with DNA-binding domain (DUF88) [Bradyrhizobium sp. ORS278] Length = 216 Score = 251 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 98/181 (54%), Positives = 136/181 (75%), Gaps = 2/181 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M KIALFIDGANLYA++K LGFDIDY++LLK F+SR ++RA+YYT ++ D Q++ Sbjct: 1 MSSSTNKIALFIDGANLYATAKTLGFDIDYKRLLKEFQSRGTLLRAFYYTAIIED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++ +V+FS Sbjct: 59 SSIRPLIDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHIDQMVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F +LV A+QR+ +VT++ST+ S P M +D+LRRQAD F DL L++++ RDP E Sbjct: 119 GDGDFRSLVEAMQRRGVRVTVISTISSQPPMIADELRRQADVFTDLVELQSKLGRDPSER 178 Query: 181 K 181 Sbjct: 179 P 179 >gi|254718792|ref|ZP_05180603.1| hypothetical protein Bru83_04498 [Brucella sp. 83/13] gi|265983772|ref|ZP_06096507.1| conserved hypothetical protein [Brucella sp. 83/13] gi|306837511|ref|ZP_07470386.1| cytoplasmic protein [Brucella sp. NF 2653] gi|264662364|gb|EEZ32625.1| conserved hypothetical protein [Brucella sp. 83/13] gi|306407403|gb|EFM63607.1| cytoplasmic protein [Brucella sp. NF 2653] Length = 202 Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats. Identities = 113/182 (62%), Positives = 146/182 (80%), Gaps = 2/182 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFD REKI LFIDGANLYA+SK LGFDIDYRKLLKAF+ R ++RAYYYT +V D Q++ Sbjct: 1 MFDSREKIVLFIDGANLYAASKTLGFDIDYRKLLKAFQKRGYLLRAYYYTALVED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K AKEFT++ GR++VK +MD+EL VDA + ++ ++H VIFS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKAAKEFTDSTGRRKVKGNMDIELTVDAMQLTDTVDHFVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F +LV ALQRK +KV++VST+ + P+M SD+LRRQAD+F+DL LK EI RDP E Sbjct: 119 GDGDFRSLVEALQRKGRKVSVVSTLTTQPAMISDELRRQADHFIDLVSLKAEIGRDPSER 178 Query: 181 KK 182 + Sbjct: 179 AR 180 >gi|115525034|ref|YP_781945.1| hypothetical protein RPE_3028 [Rhodopseudomonas palustris BisA53] gi|115518981|gb|ABJ06965.1| protein of unknown function DUF88 [Rhodopseudomonas palustris BisA53] Length = 209 Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats. Identities = 97/175 (55%), Positives = 135/175 (77%), Gaps = 2/175 (1%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 KIALFIDGANLYA++K LGFDIDY++LLK F+SR ++RA+YYT ++ D Q++S + PL Sbjct: 6 KIALFIDGANLYATAKTLGFDIDYKRLLKEFQSRGTLVRAFYYTAIIED--QEYSSIRPL 63 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126 +DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++ +V+FSGDG F Sbjct: 64 IDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHVDQIVLFSGDGDFR 123 Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 +LV A+QR+ +VT++ST+ S P M +D+LRRQAD F DL L++++ RDP E Sbjct: 124 SLVEAVQRRGVRVTVISTISSQPPMIADELRRQADVFTDLVELQSKLGRDPAERP 178 >gi|312114934|ref|YP_004012530.1| hypothetical protein Rvan_2206 [Rhodomicrobium vannielii ATCC 17100] gi|311220063|gb|ADP71431.1| hypothetical protein Rvan_2206 [Rhodomicrobium vannielii ATCC 17100] Length = 210 Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats. Identities = 99/177 (55%), Positives = 136/177 (76%), Gaps = 2/177 (1%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 F E+IALFIDGANLYA++KALGFDIDY++LL FR++ +++RA YYT + EQ++S Sbjct: 3 FYTTERIALFIDGANLYATAKALGFDIDYKRLLNLFRNKGVLLRALYYTALAE--EQEYS 60 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 + PL+DWL YNG+ +V K KEFT+ GR+++K +MD+ELAVDA E SE L+H+++FSG Sbjct: 61 SIRPLIDWLDYNGYSMVTKPTKEFTDASGRRKIKGNMDIELAVDAMELSEHLDHIILFSG 120 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178 DG F TLV ALQ K K+V++VST+ + P M +D+LRRQAD F+DLA L+ +I R Sbjct: 121 DGDFRTLVEALQHKGKRVSVVSTLTTQPPMVADELRRQADQFIDLADLQKDICRTQR 177 >gi|92117780|ref|YP_577509.1| hypothetical protein Nham_2257 [Nitrobacter hamburgensis X14] gi|91800674|gb|ABE63049.1| protein of unknown function DUF88 [Nitrobacter hamburgensis X14] Length = 206 Score = 251 bits (641), Expect = 3e-65, Method: Composition-based stats. Identities = 99/179 (55%), Positives = 135/179 (75%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M KIALFIDGANLYA++K LGFDIDY++LLK F+SR ++RA+YYT ++ D Q++ Sbjct: 1 MSSASNKIALFIDGANLYATAKTLGFDIDYKRLLKEFQSRGTLVRAFYYTAIIED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++ +V+FS Sbjct: 59 SSIRPLIDWLDYNGYTVVTKATKEFVDASGRRKVKGNMDIELAVDAMELAEHVDQIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F +LV A+QR+ +VT+VST+ S P M +D+LRRQAD F DL L+ ++ RDP E Sbjct: 119 GDGDFRSLVEAVQRRGVRVTVVSTISSQPPMIADELRRQADVFTDLVELQPKLGRDPSE 177 >gi|254487193|ref|ZP_05100398.1| DUF88 [Roseobacter sp. GAI101] gi|214044062|gb|EEB84700.1| DUF88 [Roseobacter sp. GAI101] Length = 181 Score = 251 bits (641), Expect = 4e-65, Method: Composition-based stats. Identities = 95/179 (53%), Positives = 134/179 (74%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++K+LGFDIDY+ L + F R ++RA+YYT ++ + E + Sbjct: 1 MFYKDERLALFIDGSNLYAAAKSLGFDIDYKLLRQEFMRRGKLLRAFYYTALLENEE--Y 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWL+YNGF +V K AKE+T++ GR++VK +MD+ELAVDA E + L+H+VIFS Sbjct: 59 SPIRPLVDWLNYNGFSMVTKPAKEYTDSMGRRKVKGNMDIELAVDAMELAPHLDHIVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F LV +LQR+ +V++VST+ S P M SD LRRQ D F++L L++ I R E Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMISDDLRRQVDNFIELEDLRDVIGRPARE 177 >gi|154253305|ref|YP_001414129.1| hypothetical protein Plav_2865 [Parvibaculum lavamentivorans DS-1] gi|154157255|gb|ABS64472.1| protein of unknown function DUF88 [Parvibaculum lavamentivorans DS-1] Length = 206 Score = 251 bits (641), Expect = 4e-65, Method: Composition-based stats. Identities = 99/181 (54%), Positives = 141/181 (77%), Gaps = 2/181 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 +F P E+IALFIDGANLY++++ LGFDIDY++LL FRS+ +++RA+YYT ++ D Q++ Sbjct: 2 IFYPNERIALFIDGANLYSAARGLGFDIDYKRLLDHFRSKGVLVRAFYYTALLED--QEY 59 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SPL PL+DWL YNG+ VV K AKEFT+ GR+R+K +MD+ELA+DA E ++ L+HLV+FS Sbjct: 60 SPLRPLIDWLDYNGYAVVTKPAKEFTDATGRRRIKGNMDIELAIDALEIADKLDHLVLFS 119 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F LV A+QRK K+VT+VST+ S P M +D+LRRQAD +++L +++ I R + Sbjct: 120 GDGDFRRLVDAVQRKGKRVTVVSTMRSQPPMIADELRRQADQYVELESMRDAIGRSHSDR 179 Query: 181 K 181 Sbjct: 180 P 180 >gi|119384144|ref|YP_915200.1| hypothetical protein Pden_1403 [Paracoccus denitrificans PD1222] gi|119373911|gb|ABL69504.1| protein of unknown function DUF88 [Paracoccus denitrificans PD1222] Length = 183 Score = 251 bits (641), Expect = 4e-65, Method: Composition-based stats. Identities = 93/179 (51%), Positives = 134/179 (74%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF +++ALFIDG+NLYA++K+LGFDIDY+ L + F R +IRAYYYT ++ + + + Sbjct: 1 MFYKDDRLALFIDGSNLYAAAKSLGFDIDYKLLRQEFERRGKLIRAYYYTALLENED--Y 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNG+ +V K A+E+T+ GR++VK +MDVEL ++A E + L+H V+FS Sbjct: 59 SPIRPLVDWLHYNGYSMVTKPAREYTDALGRRKVKGNMDVELVINAMELAPRLDHAVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F LV ALQR+ +V++VST+ S P M +D+LRRQAD F++L L++ I R P E Sbjct: 119 GDGDFRPLVEALQRQGVRVSVVSTMRSQPPMIADELRRQADNFIELDALRDIIGRPPRE 177 >gi|90424132|ref|YP_532502.1| hypothetical protein RPC_2633 [Rhodopseudomonas palustris BisB18] gi|90106146|gb|ABD88183.1| protein of unknown function DUF88 [Rhodopseudomonas palustris BisB18] Length = 208 Score = 250 bits (639), Expect = 7e-65, Method: Composition-based stats. Identities = 98/181 (54%), Positives = 136/181 (75%), Gaps = 2/181 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M KIALFIDGANLYA++K LGFDIDY++LLK F+SR ++RA+YYT ++ D Q++ Sbjct: 1 MSSASSKIALFIDGANLYATAKTLGFDIDYKRLLKEFQSRGTLVRAFYYTAIIED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++ +V+FS Sbjct: 59 SSIRPLIDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHIDQMVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F +LV A+QR+ +VT++ST+ S P M +D+LRRQAD F DL L++++ RDP E Sbjct: 119 GDGDFRSLVEAVQRRGVRVTVISTISSQPPMIADELRRQADVFTDLVELQSKLGRDPAER 178 Query: 181 K 181 Sbjct: 179 P 179 >gi|23501536|ref|NP_697663.1| hypothetical protein BR0649 [Brucella suis 1330] gi|161618620|ref|YP_001592507.1| hypothetical protein BCAN_A0662 [Brucella canis ATCC 23365] gi|163842921|ref|YP_001627325.1| hypothetical protein BSUIS_A0677 [Brucella suis ATCC 23445] gi|254703984|ref|ZP_05165812.1| hypothetical protein Bsuib36_08664 [Brucella suis bv. 3 str. 686] gi|260566769|ref|ZP_05837239.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40] gi|261754636|ref|ZP_05998345.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686] gi|23347446|gb|AAN29578.1| conserved hypothetical protein [Brucella suis 1330] gi|161335431|gb|ABX61736.1| Hypothetical protein BCAN_A0662 [Brucella canis ATCC 23365] gi|163673644|gb|ABY37755.1| Hypothetical protein BSUIS_A0677 [Brucella suis ATCC 23445] gi|260156287|gb|EEW91367.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40] gi|261744389|gb|EEY32315.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686] Length = 191 Score = 250 bits (638), Expect = 9e-65, Method: Composition-based stats. Identities = 113/179 (63%), Positives = 146/179 (81%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFD REKIALFI+GANLYA+SK LGFDIDYRKLLKAF+ R ++RAYYYT +V D Q++ Sbjct: 1 MFDSREKIALFINGANLYAASKTLGFDIDYRKLLKAFQKRGYLLRAYYYTALVED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K AKEFT++ GR++VK +MD+EL VDA + ++ ++H VIFS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKAAKEFTDSTGRRKVKGNMDIELTVDAMQLTDTVDHFVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F +LV ALQRK +KV++VST+ + P+M SD+LRRQAD+F+DL LK EI RDP E Sbjct: 119 GDGDFRSLVEALQRKGRKVSVVSTLTTQPAMISDELRRQADHFIDLVSLKAEIGRDPSE 177 >gi|75676115|ref|YP_318536.1| hypothetical protein Nwi_1924 [Nitrobacter winogradskyi Nb-255] gi|74420985|gb|ABA05184.1| Protein of unknown function DUF88 [Nitrobacter winogradskyi Nb-255] Length = 205 Score = 250 bits (638), Expect = 9e-65, Method: Composition-based stats. Identities = 99/181 (54%), Positives = 136/181 (75%), Gaps = 2/181 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M KIALFIDGANLYA++K LGFDIDY++LLK F+SR ++RA+YYT ++ D Q++ Sbjct: 1 MPSASNKIALFIDGANLYATAKTLGFDIDYKRLLKEFQSRGTLVRAFYYTAIIED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++ +V+FS Sbjct: 59 SSIRPLIDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHVDQIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F +LV A+QR+ +VT+VST+ S P M +D+LRRQAD F DL L+ ++ RDP E Sbjct: 119 GDGDFRSLVEAVQRRGVRVTVVSTIASQPPMIADELRRQADVFTDLVELQPKLGRDPSER 178 Query: 181 K 181 + Sbjct: 179 Q 179 >gi|91977116|ref|YP_569775.1| hypothetical protein RPD_2645 [Rhodopseudomonas palustris BisB5] gi|91683572|gb|ABE39874.1| protein of unknown function DUF88 [Rhodopseudomonas palustris BisB5] Length = 228 Score = 250 bits (638), Expect = 9e-65, Method: Composition-based stats. Identities = 98/175 (56%), Positives = 135/175 (77%), Gaps = 2/175 (1%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 KIALFIDGANLYA++K LGFDIDY++LLK F+SR +IRA+YYT ++ D Q++S + PL Sbjct: 27 KIALFIDGANLYATAKTLGFDIDYKRLLKEFQSRGTLIRAFYYTAIIED--QEYSSIRPL 84 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126 +DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++ +V+FSGDG F Sbjct: 85 IDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHIDQMVLFSGDGDFR 144 Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 +LV A+QR+ +VT++ST+ S P M +D+LRRQAD F DL L+++I RDP + Sbjct: 145 SLVEAVQRRGVRVTVISTISSQPPMIADELRRQADTFTDLVELQSKIGRDPADRP 199 >gi|239831485|ref|ZP_04679814.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301] gi|239823752|gb|EEQ95320.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301] Length = 191 Score = 250 bits (638), Expect = 9e-65, Method: Composition-based stats. Identities = 113/181 (62%), Positives = 145/181 (80%), Gaps = 2/181 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFD REKIALFIDGANLYA+SK LGFDIDYRKLLKAF+ R ++RAYYYT +V D Q++ Sbjct: 1 MFDSREKIALFIDGANLYAASKTLGFDIDYRKLLKAFQKRGYLLRAYYYTALVED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K AKEFT++ GR++VK +MD+EL VDA + ++ ++H VIFS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKAAKEFTDSTGRRKVKGNMDIELTVDAMQLTDTVDHFVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F +L ALQRK +KV++VST+ + P+M SD+LRRQAD+F+DL LK EI RDP E Sbjct: 119 GDGDFRSLAEALQRKGRKVSVVSTLTTQPAMISDELRRQADHFIDLVSLKAEIGRDPSER 178 Query: 181 K 181 Sbjct: 179 P 179 >gi|85715063|ref|ZP_01046047.1| hypothetical protein NB311A_00725 [Nitrobacter sp. Nb-311A] gi|85697978|gb|EAQ35851.1| hypothetical protein NB311A_00725 [Nitrobacter sp. Nb-311A] Length = 205 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 99/181 (54%), Positives = 136/181 (75%), Gaps = 2/181 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M KIALFIDGANLYA++K LGFDIDY++LLK F+SR ++RA+YYT ++ D Q++ Sbjct: 1 MPSASNKIALFIDGANLYATAKTLGFDIDYKRLLKEFQSRGTLVRAFYYTAIIED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++ +V+FS Sbjct: 59 SSIRPLIDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHVDQIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F +LV A+QR+ +VT+VST+ S P M +D+LRRQAD F DL L+ ++ RDP E Sbjct: 119 GDGDFRSLVEAVQRRGVRVTVVSTIASQPPMIADELRRQADVFTDLVELQPKLGRDPSER 178 Query: 181 K 181 + Sbjct: 179 Q 179 >gi|154247759|ref|YP_001418717.1| hypothetical protein Xaut_3836 [Xanthobacter autotrophicus Py2] gi|154161844|gb|ABS69060.1| protein of unknown function DUF88 [Xanthobacter autotrophicus Py2] Length = 202 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 101/176 (57%), Positives = 142/176 (80%), Gaps = 2/176 (1%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 EKIAL IDGANLY+++KALGFDIDY++LLK F+SR ++RA+YYTT++ D Q++S + P Sbjct: 5 EKIALLIDGANLYSATKALGFDIDYKRLLKEFQSRGYLLRAFYYTTLIED--QEYSSIRP 62 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125 LLDWL YNG+ VV K+A+EFT++ GR+RV+ +MD+E+AVDA E +E ++H+V+FSGDG F Sbjct: 63 LLDWLDYNGYAVVTKLAREFTDSQGRRRVRGNMDIEIAVDAMELAEHVDHIVLFSGDGDF 122 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 +LV ALQRK +V++VST+ + P + +D LRRQAD F+DL L+ +I RDP E + Sbjct: 123 RSLVEALQRKGVRVSVVSTISTQPPLIADDLRRQADVFIDLVDLQPKIGRDPSERQ 178 >gi|254713779|ref|ZP_05175590.1| hypothetical protein BcetM6_10570 [Brucella ceti M644/93/1] gi|254717164|ref|ZP_05178975.1| hypothetical protein BcetM_12234 [Brucella ceti M13/05/1] gi|261218981|ref|ZP_05933262.1| conserved hypothetical protein [Brucella ceti M13/05/1] gi|261321520|ref|ZP_05960717.1| conserved hypothetical protein [Brucella ceti M644/93/1] gi|260924070|gb|EEX90638.1| conserved hypothetical protein [Brucella ceti M13/05/1] gi|261294210|gb|EEX97706.1| conserved hypothetical protein [Brucella ceti M644/93/1] Length = 191 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 114/179 (63%), Positives = 146/179 (81%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFD REKIALFIDGANLYA+SK LGFDIDYRKLLKAF+ R ++RAYYYT +V D Q++ Sbjct: 1 MFDSREKIALFIDGANLYAASKTLGFDIDYRKLLKAFQKRGYLLRAYYYTALVED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K AKEFT++ GR++VK +MD+EL VDA + ++ ++H VIFS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKAAKEFTDSTGRRKVKGNMDIELTVDAKQLTDTVDHFVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F +LV ALQRK +KV++VST+ + P+M SD+LRRQAD+F+DL LK EI RDP E Sbjct: 119 GDGDFRSLVEALQRKGRKVSVVSTLTTQPAMISDELRRQADHFIDLVSLKAEIGRDPSE 177 >gi|256159377|ref|ZP_05457159.1| hypothetical protein BcetM4_10523 [Brucella ceti M490/95/1] gi|256254675|ref|ZP_05460211.1| hypothetical protein BcetB_10340 [Brucella ceti B1/94] gi|261221851|ref|ZP_05936132.1| conserved hypothetical protein [Brucella ceti B1/94] gi|265997815|ref|ZP_06110372.1| conserved hypothetical protein [Brucella ceti M490/95/1] gi|260920435|gb|EEX87088.1| conserved hypothetical protein [Brucella ceti B1/94] gi|262552283|gb|EEZ08273.1| conserved hypothetical protein [Brucella ceti M490/95/1] Length = 191 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 112/179 (62%), Positives = 144/179 (80%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFD REKIALFIDGANLYA+SK LGFDIDYRKLLKAF+ R ++RAYYYT +V D Q++ Sbjct: 1 MFDSREKIALFIDGANLYAASKTLGFDIDYRKLLKAFQKRGYLLRAYYYTALVED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + P +DWL YNG++V K AKEFT++ GR++VK +MD+EL VDA + ++ ++H VIFS Sbjct: 59 SSIRPFIDWLDYNGYKVGTKAAKEFTDSTGRRKVKGNMDIELTVDAKQLTDTVDHFVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F +LV ALQRK +KV++VST+ + P+M SD+LRRQAD+F+DL LK EI RDP E Sbjct: 119 GDGDFRSLVEALQRKGRKVSVVSTLTTQPAMISDELRRQADHFIDLVSLKAEIGRDPSE 177 >gi|148256038|ref|YP_001240623.1| hypothetical protein BBta_4689 [Bradyrhizobium sp. BTAi1] gi|146408211|gb|ABQ36717.1| hypothetical protein BBta_4689 [Bradyrhizobium sp. BTAi1] Length = 217 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 98/181 (54%), Positives = 136/181 (75%), Gaps = 2/181 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M KIALFIDGANLYA++K LGFDIDY++LLK F+SR ++RA+YYT ++ D Q++ Sbjct: 1 MSSSTNKIALFIDGANLYATAKTLGFDIDYKRLLKEFQSRGTLLRAFYYTAIIED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++ +V+FS Sbjct: 59 SSIRPLIDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHIDQMVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F +LV A+QR+ +VT++ST+ S P M +D+LRRQAD F DL L++++ RDP E Sbjct: 119 GDGDFRSLVEAMQRRGVRVTVISTISSQPPMIADELRRQADVFTDLVELQSKLGRDPSER 178 Query: 181 K 181 Sbjct: 179 P 179 >gi|328543520|ref|YP_004303629.1| RtsE [polymorphum gilvum SL003B-26A1] gi|326413264|gb|ADZ70327.1| RtsE [Polymorphum gilvum SL003B-26A1] Length = 195 Score = 248 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 100/181 (55%), Positives = 141/181 (77%), Gaps = 2/181 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFD REKIALFIDGANLY+++KA+GFDIDY+ LLK F+ + ++RAYYYT ++ D Q++ Sbjct: 1 MFDSREKIALFIDGANLYSTAKAIGFDIDYKMLLKEFQGKGYLLRAYYYTAIIED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++V+ K KEF + GR++VK +MD+ELAVDA + + ++H+V+FS Sbjct: 59 SSIRPLIDWLDYNGYKVITKPVKEFVDASGRRKVKGNMDIELAVDAMQIVDHVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F +LV ALQRK +KV++VST+ + P M +D LRRQAD+F+DLA L ++ RDP + Sbjct: 119 GDGDFRSLVEALQRKGRKVSVVSTLQTQPPMIADDLRRQADHFIDLATLAAKVGRDPADR 178 Query: 181 K 181 Sbjct: 179 P 179 >gi|89053002|ref|YP_508453.1| hypothetical protein Jann_0511 [Jannaschia sp. CCS1] gi|88862551|gb|ABD53428.1| protein of unknown function DUF88 [Jannaschia sp. CCS1] Length = 191 Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats. Identities = 94/174 (54%), Positives = 128/174 (73%), Gaps = 2/174 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++KALGFDIDY+ L F R ++RA YYT ++ + + + Sbjct: 1 MFYRDERLALFIDGSNLYAAAKALGFDIDYKLLRSEFMQRGKLLRANYYTALLENDD--Y 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNGF +V K AKEF ++ GR++VK +MD+ELAVDA E + ++H+VIFS Sbjct: 59 SPIRPLVDWLHYNGFNMVTKPAKEFVDSQGRRKVKGNMDIELAVDAMETAPHVDHIVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 GDG F LV +LQRK +V++VST+ S P M +D LRRQ D F++L LK I Sbjct: 119 GDGDFRPLVESLQRKGCRVSVVSTIRSQPPMIADDLRRQCDNFIELLDLKEAIG 172 >gi|159042747|ref|YP_001531541.1| hypothetical protein Dshi_0191 [Dinoroseobacter shibae DFL 12] gi|157910507|gb|ABV91940.1| protein of unknown function DUF88 [Dinoroseobacter shibae DFL 12] Length = 190 Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats. Identities = 93/174 (53%), Positives = 132/174 (75%), Gaps = 2/174 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF +++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + E + Sbjct: 1 MFYKDDRLALFIDGSNLYAAAKALGFDIDYKLLRQEFMRRGKLLRAFYYTALLENDE--Y 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+ELAVDA E + ++H V+FS Sbjct: 59 SPIRPLVDWLHYNGFSMVTKPAKEYTDSQGRRKVKGNMDIELAVDAMELAPHMDHAVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 GDG F L+ +LQR+ +V++VST+ S P M SD+LRRQAD F++L LK I Sbjct: 119 GDGDFRPLIESLQRRGVRVSVVSTIRSHPPMISDELRRQADNFIELDELKEIIG 172 >gi|86749724|ref|YP_486220.1| hypothetical protein RPB_2606 [Rhodopseudomonas palustris HaA2] gi|86572752|gb|ABD07309.1| Protein of unknown function DUF88 [Rhodopseudomonas palustris HaA2] Length = 209 Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats. Identities = 98/175 (56%), Positives = 134/175 (76%), Gaps = 2/175 (1%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 KIALFIDGANLYA++K LGFDIDY++LLK F SR +IRA+YYT ++ D Q++S + PL Sbjct: 8 KIALFIDGANLYATAKTLGFDIDYKRLLKEFHSRGTLIRAFYYTAIIED--QEYSSIRPL 65 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126 +DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++ +V+FSGDG F Sbjct: 66 IDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHIDQMVLFSGDGDFR 125 Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 +LV A+QR+ +VT++ST+ S P M +D+LRRQAD F DL L+++I RDP + Sbjct: 126 SLVEAVQRRGVRVTVISTISSQPPMIADELRRQADVFTDLVELQSKIGRDPADRP 180 >gi|158422876|ref|YP_001524168.1| hypothetical protein AZC_1252 [Azorhizobium caulinodans ORS 571] gi|158329765|dbj|BAF87250.1| uncharacterized conserved protein [Azorhizobium caulinodans ORS 571] Length = 201 Score = 248 bits (633), Expect = 3e-64, Method: Composition-based stats. Identities = 104/175 (59%), Positives = 141/175 (80%), Gaps = 2/175 (1%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 EKIALFIDGANLY+++KALGFDIDY++LLK F+SR ++RA+YYTT+V D Q++S + Sbjct: 4 MEKIALFIDGANLYSATKALGFDIDYKRLLKEFQSRGYLLRAFYYTTLVED--QEYSSIR 61 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 PLLDWL YNG+ VV K+A+EFT++ GR+RV+ +MD+E+AVDA E + L+H+V+FSGDG Sbjct: 62 PLLDWLDYNGYSVVTKLAREFTDSQGRRRVRGNMDIEIAVDAMELAGSLDHIVLFSGDGD 121 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 F +LV ALQRK +V++VST+ + P + SD LRRQAD F+DL L+ +I RDP E Sbjct: 122 FRSLVEALQRKGVRVSVVSTISTQPPLISDDLRRQADVFIDLVDLQAKIGRDPAE 176 >gi|225627151|ref|ZP_03785189.1| Hypothetical protein, conserved [Brucella ceti str. Cudo] gi|254707641|ref|ZP_05169469.1| hypothetical protein BpinM_11896 [Brucella pinnipedialis M163/99/10] gi|254709777|ref|ZP_05171588.1| hypothetical protein BpinB_05796 [Brucella pinnipedialis B2/94] gi|256031267|ref|ZP_05444881.1| hypothetical protein BpinM2_11548 [Brucella pinnipedialis M292/94/1] gi|260168403|ref|ZP_05755214.1| hypothetical protein BruF5_08553 [Brucella sp. F5/99] gi|261315135|ref|ZP_05954332.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10] gi|261317309|ref|ZP_05956506.1| conserved hypothetical protein [Brucella pinnipedialis B2/94] gi|261757864|ref|ZP_06001573.1| conserved hypothetical protein [Brucella sp. F5/99] gi|265988348|ref|ZP_06100905.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1] gi|225617986|gb|EEH15030.1| Hypothetical protein, conserved [Brucella ceti str. Cudo] gi|261296532|gb|EEY00029.1| conserved hypothetical protein [Brucella pinnipedialis B2/94] gi|261304161|gb|EEY07658.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10] gi|261737848|gb|EEY25844.1| conserved hypothetical protein [Brucella sp. F5/99] gi|264660545|gb|EEZ30806.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1] Length = 191 Score = 248 bits (633), Expect = 3e-64, Method: Composition-based stats. Identities = 113/179 (63%), Positives = 145/179 (81%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFD REKIALFIDGANLYA+SK LGFDIDYRKLLKAF+ R ++RAYYYT +V D Q++ Sbjct: 1 MFDSREKIALFIDGANLYAASKTLGFDIDYRKLLKAFQKRGYLLRAYYYTALVED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++V K AKEFT++ GR++VK +MD+EL VDA + ++ ++H VIFS Sbjct: 59 SSIRPLIDWLDYNGYKVGTKAAKEFTDSTGRRKVKGNMDIELTVDAKQLTDTVDHFVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F +LV ALQRK +KV++VST+ + P+M SD+LRRQAD+F+DL LK EI RDP E Sbjct: 119 GDGDFRSLVEALQRKGRKVSVVSTLTTQPAMISDELRRQADHFIDLVSLKAEIGRDPSE 177 >gi|153009965|ref|YP_001371180.1| hypothetical protein Oant_2638 [Ochrobactrum anthropi ATCC 49188] gi|151561853|gb|ABS15351.1| protein of unknown function DUF88 [Ochrobactrum anthropi ATCC 49188] Length = 191 Score = 247 bits (632), Expect = 4e-64, Method: Composition-based stats. Identities = 113/179 (63%), Positives = 145/179 (81%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFD REKIALFIDGANLYA+SK LGFDIDYRKLLKAF+ R ++RAYYYT +V D Q++ Sbjct: 1 MFDSREKIALFIDGANLYAASKTLGFDIDYRKLLKAFQKRGYLLRAYYYTALVED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K AKEFT++ GR++VK +MD+EL VDA + ++ ++H VIFS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKAAKEFTDSTGRRKVKGNMDIELTVDAMQLTDTVDHFVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F +L ALQRK +KV++VST+ + P+M SD+LRRQAD+F+DL LK EI RDP E Sbjct: 119 GDGDFRSLAEALQRKGRKVSVVSTLTTQPAMISDELRRQADHFIDLVSLKAEIGRDPSE 177 >gi|39935757|ref|NP_948033.1| hypothetical protein RPA2691 [Rhodopseudomonas palustris CGA009] gi|192291344|ref|YP_001991949.1| hypothetical protein Rpal_2966 [Rhodopseudomonas palustris TIE-1] gi|39649610|emb|CAE28132.1| DUF88 [Rhodopseudomonas palustris CGA009] gi|192285093|gb|ACF01474.1| protein of unknown function DUF88 [Rhodopseudomonas palustris TIE-1] Length = 216 Score = 247 bits (632), Expect = 4e-64, Method: Composition-based stats. Identities = 97/177 (54%), Positives = 135/177 (76%), Gaps = 2/177 (1%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 KIALFIDGANLYA++K LGFDIDY++LLK F+SR ++RA+YYT ++ D Q++S Sbjct: 4 SSSNKIALFIDGANLYATAKTLGFDIDYKRLLKEFQSRGNLVRAFYYTAIIED--QEYSS 61 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122 + PL+DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++ +V+FSGD Sbjct: 62 IRPLIDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHIDQMVLFSGD 121 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 G F +LV A+QR+ +VT++ST+ S P M +D+LRRQAD F DL L+++I RDP + Sbjct: 122 GDFRSLVEAVQRRGVRVTVISTISSQPPMIADELRRQADIFTDLVELQSKIGRDPAD 178 >gi|288958017|ref|YP_003448358.1| hypothetical protein AZL_011760 [Azospirillum sp. B510] gi|288910325|dbj|BAI71814.1| hypothetical protein AZL_011760 [Azospirillum sp. B510] Length = 200 Score = 247 bits (632), Expect = 4e-64, Method: Composition-based stats. Identities = 90/176 (51%), Positives = 130/176 (73%), Gaps = 2/176 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDGANLYA++++LGFDIDY++L F ++RA+YYT +V D Q++ Sbjct: 1 MFYKEERLALFIDGANLYAAARSLGFDIDYKRLRDGFAGEGRLVRAFYYTALVED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWL YNG+ +V K KEFT+ GR+++K +MD+ELA+D E ++ ++H+++FS Sbjct: 59 SPIRPLVDWLDYNGYTMVTKPTKEFTDASGRRKIKGNMDIELAIDVMEMADHVDHILLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 GDG F LV A+QRK + ++VSTV S P M +D+LRRQAD F++L L IAR Sbjct: 119 GDGDFRRLVEAVQRKGVRFSVVSTVRSQPPMVADELRRQADNFIELQELAPFIART 174 >gi|17987581|ref|NP_540215.1| putative cytoplasmic protein [Brucella melitensis bv. 1 str. 16M] gi|225852170|ref|YP_002732403.1| hypothetical protein BMEA_A0686 [Brucella melitensis ATCC 23457] gi|256044347|ref|ZP_05447251.1| hypothetical protein Bmelb1R_07603 [Brucella melitensis bv. 1 str. Rev.1] gi|256113190|ref|ZP_05454058.1| hypothetical protein Bmelb3E_10777 [Brucella melitensis bv. 3 str. Ether] gi|256264318|ref|ZP_05466850.1| conserved hypothetical protein [Brucella melitensis bv. 2 str. 63/9] gi|260563699|ref|ZP_05834185.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M] gi|265990761|ref|ZP_06103318.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. Rev.1] gi|265994597|ref|ZP_06107154.1| conserved hypothetical protein [Brucella melitensis bv. 3 str. Ether] gi|17983287|gb|AAL52479.1| hypothetical cytosolic protein [Brucella melitensis bv. 1 str. 16M] gi|225640535|gb|ACO00449.1| Hypothetical protein, conserved [Brucella melitensis ATCC 23457] gi|260153715|gb|EEW88807.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M] gi|262765710|gb|EEZ11499.1| conserved hypothetical protein [Brucella melitensis bv. 3 str. Ether] gi|263001545|gb|EEZ14120.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. Rev.1] gi|263094592|gb|EEZ18390.1| conserved hypothetical protein [Brucella melitensis bv. 2 str. 63/9] gi|326408671|gb|ADZ65736.1| putative cytoplasmic protein [Brucella melitensis M28] gi|326538396|gb|ADZ86611.1| conserved hypothetical protein [Brucella melitensis M5-90] Length = 191 Score = 247 bits (632), Expect = 5e-64, Method: Composition-based stats. Identities = 112/179 (62%), Positives = 145/179 (81%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFD REKIALFIDGANLYA+SK LGFDIDYRKLLKAF+ R ++RAYYYT +V D Q++ Sbjct: 1 MFDSREKIALFIDGANLYAASKTLGFDIDYRKLLKAFQKRGYLLRAYYYTALVED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K A+EFT++ GR++VK +MD+EL VDA + ++ ++H VIFS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKAAREFTDSTGRRKVKGNMDIELTVDAMQLTDTVDHFVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 G G F +LV ALQRK +KV++VST+ + P+M SD+LRRQAD+F+DL LK EI RDP E Sbjct: 119 GYGDFRSLVEALQRKGRKVSVVSTLTTQPAMISDELRRQADHFIDLVSLKAEIGRDPSE 177 >gi|254701438|ref|ZP_05163266.1| hypothetical protein Bsuib55_11349 [Brucella suis bv. 5 str. 513] gi|261751977|ref|ZP_05995686.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513] gi|261741730|gb|EEY29656.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513] Length = 191 Score = 247 bits (632), Expect = 5e-64, Method: Composition-based stats. Identities = 112/179 (62%), Positives = 145/179 (81%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFD REKIALFI+GANLY +SK LGFDIDYRKLLKAF+ R ++RAYYYT +V D Q++ Sbjct: 1 MFDSREKIALFINGANLYTASKTLGFDIDYRKLLKAFQKRGYLLRAYYYTALVED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K AKEFT++ GR++VK +MD+EL VDA + ++ ++H VIFS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKAAKEFTDSTGRRKVKGNMDLELTVDAMQLTDTVDHFVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F +LV ALQRK +KV++VST+ + P+M SD+LRRQAD+F+DL LK EI RDP E Sbjct: 119 GDGDFRSLVEALQRKGRKVSVVSTLTTQPAMISDELRRQADHFIDLVSLKAEIGRDPSE 177 >gi|294852014|ref|ZP_06792687.1| hypothetical protein BAZG_00929 [Brucella sp. NVSL 07-0026] gi|294820603|gb|EFG37602.1| hypothetical protein BAZG_00929 [Brucella sp. NVSL 07-0026] Length = 191 Score = 247 bits (631), Expect = 5e-64, Method: Composition-based stats. Identities = 112/179 (62%), Positives = 144/179 (80%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF REKIALFID ANLYA+SK LGFDIDYRKLLKAF+ R ++RAYYYT +V D Q++ Sbjct: 1 MFGSREKIALFIDDANLYAASKTLGFDIDYRKLLKAFQKRGYLLRAYYYTALVED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K AKEFT++ GR++VK +MD+EL VDA + ++ ++H VIFS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKAAKEFTDSTGRRKVKGNMDIELTVDAMQLTDTVDHFVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F +LV ALQRK +KV++VST+ + P+M SD+LRRQAD+F+DL LK EI RDP E Sbjct: 119 GDGDFRSLVEALQRKGRKVSVVSTLTTQPAMISDELRRQADHFIDLVSLKAEIGRDPSE 177 >gi|163793037|ref|ZP_02187013.1| hypothetical protein BAL199_24649 [alpha proteobacterium BAL199] gi|159181683|gb|EDP66195.1| hypothetical protein BAL199_24649 [alpha proteobacterium BAL199] Length = 218 Score = 247 bits (631), Expect = 5e-64, Method: Composition-based stats. Identities = 98/175 (56%), Positives = 137/175 (78%), Gaps = 2/175 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 +F P EK+ALFIDGANLY++++ALGFDIDY++LL F S+A +IRA+YYT ++ D Q++ Sbjct: 2 LFYPHEKVALFIDGANLYSAARALGFDIDYKRLLVLFGSKANLIRAFYYTALLED--QEY 59 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWL YNG+ +V K AKEFT++ GR+R+K +MD+ELAVD E + L+H+V+FS Sbjct: 60 SPIRPLVDWLDYNGYSLVTKPAKEFTDSQGRRRIKGNMDIELAVDMMEMVDRLDHVVLFS 119 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 GDG F +L+ A+QRK + T+VST+ S P M +D+LRRQAD F+DL L +I R Sbjct: 120 GDGDFRSLIEAVQRKGVRATVVSTIRSSPPMIADELRRQADQFIDLDQLAGDIER 174 >gi|114706254|ref|ZP_01439156.1| hypothetical protein FP2506_00680 [Fulvimarina pelagi HTCC2506] gi|114538115|gb|EAU41237.1| hypothetical protein FP2506_00680 [Fulvimarina pelagi HTCC2506] Length = 199 Score = 247 bits (631), Expect = 6e-64, Method: Composition-based stats. Identities = 108/179 (60%), Positives = 141/179 (78%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFD REKIALFIDGANLYA+S+ LGFDIDY+K+L F +A ++RAYYYT ++ D Q++ Sbjct: 1 MFDQREKIALFIDGANLYAASRNLGFDIDYKKMLTFFEKKAYLLRAYYYTALIED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K AKEFT+ GR++VK +MD+ELA+DA E S+ ++H V+FS Sbjct: 59 SSIRPLIDWLDYNGYRVVTKPAKEFTDQTGRRKVKGNMDIELAIDAMELSDTVDHFVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F +LV ALQRK +KV++VST+ + P M SD LRRQAD+F+DL LKNEI R E Sbjct: 119 GDGDFRSLVDALQRKGRKVSVVSTLATQPPMISDDLRRQADHFIDLTSLKNEIGRSQAE 177 >gi|209884968|ref|YP_002288825.1| DUF88 [Oligotropha carboxidovorans OM5] gi|209873164|gb|ACI92960.1| DUF88 [Oligotropha carboxidovorans OM5] Length = 213 Score = 246 bits (630), Expect = 6e-64, Method: Composition-based stats. Identities = 98/177 (55%), Positives = 134/177 (75%), Gaps = 2/177 (1%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 KIALFIDGANLYA++K LGFDIDY++LL F+SR ++RA+YYT ++ D Q++S Sbjct: 4 SSSNKIALFIDGANLYATAKTLGFDIDYKRLLLEFQSRGSLVRAFYYTAIIED--QEYSS 61 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122 + PL+DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++ +V+FSGD Sbjct: 62 IRPLIDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHIDQMVLFSGD 121 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 G F +LV A+QR+ +VT+VST+ S P M +D+LRRQAD F DL L+++I RDP E Sbjct: 122 GDFRSLVEAVQRRGVRVTVVSTIASQPPMIADELRRQADVFTDLVQLQSKIGRDPGE 178 >gi|300023756|ref|YP_003756367.1| hypothetical protein Hden_2248 [Hyphomicrobium denitrificans ATCC 51888] gi|299525577|gb|ADJ24046.1| protein of unknown function DUF88 [Hyphomicrobium denitrificans ATCC 51888] Length = 213 Score = 246 bits (630), Expect = 7e-64, Method: Composition-based stats. Identities = 99/186 (53%), Positives = 139/186 (74%), Gaps = 7/186 (3%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 F P E+IALFIDGANLYA++K+LGFDIDY++LL FR + ++RA YYT + EQ++S Sbjct: 3 FYPTERIALFIDGANLYATAKSLGFDIDYKRLLGLFRQKGQLVRALYYTALAE--EQEYS 60 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 + PL+DWL YNGF +V K KEFT+ GR++VK +MD+EL VDA ++ L+H+VIFSG Sbjct: 61 SIRPLIDWLDYNGFSMVTKPTKEFTDATGRRKVKGNMDIELTVDAMLLADSLDHIVIFSG 120 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD----- 176 DG F +LVAALQ+K K+V+++ST+ + P M +D+LRRQAD F+DLA L++++ R Sbjct: 121 DGDFRSLVAALQQKGKRVSVISTLQTQPPMVADELRRQADQFIDLADLEDQVGRAQNGRG 180 Query: 177 PDEDKK 182 P E + Sbjct: 181 PRESSR 186 >gi|316934150|ref|YP_004109132.1| hypothetical protein Rpdx1_2816 [Rhodopseudomonas palustris DX-1] gi|315601864|gb|ADU44399.1| hypothetical protein Rpdx1_2816 [Rhodopseudomonas palustris DX-1] Length = 213 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 96/173 (55%), Positives = 134/173 (77%), Gaps = 2/173 (1%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 KIALFIDGANLYA++K LGFDIDY++LLK F+ R ++RA+YYT ++ D Q++S + PL Sbjct: 8 KIALFIDGANLYATAKTLGFDIDYKRLLKEFQGRGNLVRAFYYTAIIED--QEYSSIRPL 65 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126 +DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++ +V+FSGDG F Sbjct: 66 IDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHIDQMVLFSGDGDFR 125 Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 +LV A+QR+ +VT++ST+ S P M +D+LRRQAD F DL L+++I RDP + Sbjct: 126 SLVEAVQRRGVRVTVISTISSQPPMIADELRRQADIFTDLVELQSKIGRDPAD 178 >gi|217977184|ref|YP_002361331.1| protein of unknown function DUF88 [Methylocella silvestris BL2] gi|217502560|gb|ACK49969.1| protein of unknown function DUF88 [Methylocella silvestris BL2] Length = 205 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 99/179 (55%), Positives = 141/179 (78%), Gaps = 2/179 (1%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +E+IALFIDGANLYA++K+LGFDIDY++LLK F+SR +IRA+YYT +V D Q++S + Sbjct: 3 DQERIALFIDGANLYATAKSLGFDIDYKRLLKEFQSRGKLIRAFYYTALVED--QEYSSI 60 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 PL+DWL YNG+ VV K KEF ++ GR++VK +MD+ELAVDA E +E L+H+V+FSGDG Sbjct: 61 RPLVDWLDYNGYSVVTKPTKEFVDSLGRRKVKGNMDIELAVDAMEMAEHLDHIVLFSGDG 120 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182 F +LV A+QRK +V++VST + P+M +D+LRRQAD F+D+ +L ++I RD + + Sbjct: 121 DFRSLVEAIQRKGVRVSVVSTNATQPAMVADELRRQADEFIDIIHLASKIGRDAGDRPE 179 >gi|90420856|ref|ZP_01228761.1| conserved hypothetical protein [Aurantimonas manganoxydans SI85-9A1] gi|90334831|gb|EAS48603.1| conserved hypothetical protein [Aurantimonas manganoxydans SI85-9A1] Length = 201 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 110/177 (62%), Positives = 143/177 (80%), Gaps = 2/177 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFD REKIALFIDGANLYA+S+ LGFDIDY+K+L++F +R ++RAYYYT +V D E + Sbjct: 1 MFDQREKIALFIDGANLYAASRGLGFDIDYKKMLRSFEARGYLLRAYYYTALVEDNE--Y 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K A+EFT+ GR+R+K +MD+ELAVDA E + ++H V+FS Sbjct: 59 SSIRPLIDWLDYNGYRVVTKPAREFTDASGRRRIKGNMDIELAVDAMELVDTVDHFVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 GDG F +LVAALQRK +KV++VST+ S P M SD LRRQAD+F++LA LK EI RDP Sbjct: 119 GDGDFRSLVAALQRKGRKVSVVSTLTSSPPMISDDLRRQADHFIELANLKAEIGRDP 175 >gi|16125797|ref|NP_420361.1| hypothetical protein CC_1550 [Caulobacter crescentus CB15] gi|221234556|ref|YP_002516992.1| cytosolic protein [Caulobacter crescentus NA1000] gi|13422935|gb|AAK23529.1| conserved hypothetical protein [Caulobacter crescentus CB15] gi|220963728|gb|ACL95084.1| hypothetical cytosolic protein [Caulobacter crescentus NA1000] Length = 198 Score = 244 bits (624), Expect = 3e-63, Method: Composition-based stats. Identities = 101/181 (55%), Positives = 134/181 (74%), Gaps = 2/181 (1%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 F P +++ALFIDGANLY+++KALGFDIDYRKLL F+ R ++IRAYYYT + + + +S Sbjct: 3 FYPTDRLALFIDGANLYSAAKALGFDIDYRKLLDEFKKRGVLIRAYYYTAIAENDD--YS 60 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 P+ PL+DWL YNGF +V K A+EFT++ GRKR + MD+E+AVD + +E +HLV+FSG Sbjct: 61 PIRPLVDWLDYNGFTLVTKPAREFTDSQGRKRWRGDMDIEIAVDMLQIAETADHLVLFSG 120 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 DG F LV A+QRK ++VT+VST+ S P M SD LRRQAD F+DLA L N I R Sbjct: 121 DGDFRALVEAVQRKGRRVTVVSTMKSQPPMTSDDLRRQADNFVDLADLGNIIGRPQRTPP 180 Query: 182 K 182 + Sbjct: 181 R 181 >gi|118587968|ref|ZP_01545378.1| hypothetical protein SIAM614_10343 [Stappia aggregata IAM 12614] gi|118439590|gb|EAV46221.1| hypothetical protein SIAM614_10343 [Stappia aggregata IAM 12614] Length = 188 Score = 244 bits (624), Expect = 3e-63, Method: Composition-based stats. Identities = 97/171 (56%), Positives = 136/171 (79%), Gaps = 2/171 (1%) Query: 11 FIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWL 70 FIDGANLY+++KA+GFDIDY++LLK F+ +A ++RAYYYT ++ D Q++S + PL+DWL Sbjct: 2 FIDGANLYSTAKAIGFDIDYKRLLKEFQGQAYLLRAYYYTALIED--QEYSSIRPLIDWL 59 Query: 71 HYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVA 130 YNG++V+ K KEF ++ GR++VK +MD+ELAVDA E E ++H+V+FSGDG F +LV Sbjct: 60 DYNGYKVITKPVKEFVDSAGRRKVKGNMDIELAVDAMELVESVDHVVLFSGDGDFRSLVE 119 Query: 131 ALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 ALQRK +KV++VST+ + P M +D LRRQAD+F+DLA L N+I RDP E Sbjct: 120 ALQRKGRKVSVVSTLKTQPPMIADDLRRQADHFIDLASLANKIGRDPSERP 170 >gi|167645687|ref|YP_001683350.1| hypothetical protein Caul_1723 [Caulobacter sp. K31] gi|167348117|gb|ABZ70852.1| protein of unknown function DUF88 [Caulobacter sp. K31] Length = 207 Score = 243 bits (621), Expect = 7e-63, Method: Composition-based stats. Identities = 100/180 (55%), Positives = 135/180 (75%), Gaps = 3/180 (1%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 F P E++ALFIDGAN ++++K+LGFDIDYRKLL FR R +++RAYYYT + + E +S Sbjct: 3 FYPTERLALFIDGANFFSAAKSLGFDIDYRKLLDEFRKRGLLVRAYYYTAIAENEE--YS 60 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 P+ PL+DWL YNGF +V K A+EFT++ GRKR + MD+E+AVD E + ++HLV+FSG Sbjct: 61 PIRPLVDWLDYNGFTLVTKPAREFTDSQGRKRWRGDMDIEIAVDMLEMAATVDHLVLFSG 120 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 DG F V A+QRK ++VT+VST+ S P MASD LRRQAD F+DLA L + I R P ++ Sbjct: 121 DGDFRAAVEAVQRKGRRVTVVSTMKSQPPMASDDLRRQADNFVDLADLGSIIGR-PQANR 179 >gi|209964804|ref|YP_002297719.1| hypothetical protein RC1_1502 [Rhodospirillum centenum SW] gi|209958270|gb|ACI98906.1| conserved hypothetical protein [Rhodospirillum centenum SW] Length = 233 Score = 243 bits (620), Expect = 9e-63, Method: Composition-based stats. Identities = 90/178 (50%), Positives = 133/178 (74%), Gaps = 2/178 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 +F E++A+FIDGANLYA++++LGFDIDY++LL+ F R ++RA+YYT +V D Q++ Sbjct: 5 IFYQEERLAMFIDGANLYAAARSLGFDIDYKRLLELFAGRGRLVRAFYYTALVED--QEY 62 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWL YNG+ +V K KE+T+ GR+++K +MD+ELA+D E +E ++H+++FS Sbjct: 63 SPIRPLVDWLDYNGYTMVTKPTKEYTDASGRRKIKGNMDIELAIDVMEMAEHVDHILLFS 122 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178 GDG F LV A+QRK +VT++STV S P M +D+LRRQAD F++L L I R Sbjct: 123 GDGDFRRLVEAVQRKGVRVTVISTVRSTPPMVADELRRQADNFLELQDLSPNIMRTHS 180 >gi|295690031|ref|YP_003593724.1| hypothetical protein Cseg_2656 [Caulobacter segnis ATCC 21756] gi|295431934|gb|ADG11106.1| protein of unknown function DUF88 [Caulobacter segnis ATCC 21756] Length = 198 Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats. Identities = 101/181 (55%), Positives = 133/181 (73%), Gaps = 2/181 (1%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 F P ++IALFIDGANLY+++KALGFDIDYRKLL F+ R ++IRAYYYT + + + +S Sbjct: 3 FYPTDRIALFIDGANLYSAAKALGFDIDYRKLLDEFKKRGVLIRAYYYTAIAENDD--YS 60 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 P+ PL+DWL YNGF +V K A+EFT++ GRKR + MD+E+AVD + +E +HLV+FSG Sbjct: 61 PIRPLVDWLDYNGFTLVTKPAREFTDSQGRKRWRGDMDIEIAVDMLQMAETADHLVLFSG 120 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 DG F LV A+QRK ++VT+VST+ S P M SD LRRQAD F+DLA L I R Sbjct: 121 DGDFRALVEAVQRKGRRVTVVSTMKSQPPMTSDDLRRQADNFVDLADLGGIIGRPQRVQS 180 Query: 182 K 182 + Sbjct: 181 R 181 >gi|227820632|ref|YP_002824602.1| hypothetical protein NGR_c00450 [Sinorhizobium fredii NGR234] gi|227339631|gb|ACP23849.1| conserved hypothetical protein [Sinorhizobium fredii NGR234] Length = 191 Score = 242 bits (619), Expect = 1e-62, Method: Composition-based stats. Identities = 115/182 (63%), Positives = 145/182 (79%), Gaps = 2/182 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFD REKIALFIDGANLYA+SK+LGFDIDYRKLL AF+ RA ++RAYYYT ++ D E F Sbjct: 1 MFDSREKIALFIDGANLYATSKSLGFDIDYRKLLSAFQKRAYLVRAYYYTALIEDLE--F 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG+ VV K AKEFT+ GR+++K SMDVELA+DA EQ + ++H V+FS Sbjct: 59 SSIRPLIDWLDYNGYTVVTKPAKEFTDALGRRKIKGSMDVELAIDALEQRQVVDHYVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG FTTLVAALQR +KVT+VST+ + P M +D+LRRQAD+F+DL L++EI R P Sbjct: 119 GDGNFTTLVAALQRNGRKVTVVSTLSTQPPMIADELRRQADHFIDLIALRSEIDRHPQAA 178 Query: 181 KK 182 + Sbjct: 179 PQ 180 >gi|298291613|ref|YP_003693552.1| hypothetical protein Snov_1628 [Starkeya novella DSM 506] gi|296928124|gb|ADH88933.1| protein of unknown function DUF88 [Starkeya novella DSM 506] Length = 203 Score = 242 bits (619), Expect = 1e-62, Method: Composition-based stats. Identities = 99/175 (56%), Positives = 138/175 (78%), Gaps = 2/175 (1%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 EKIALFIDGANLY+++K+LGFDIDY++LLK F+ R V+RA+YYTT+V D E +S + Sbjct: 1 MEKIALFIDGANLYSATKSLGFDIDYKRLLKEFQGRGYVLRAFYYTTLVEDSE--YSSIR 58 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 PLLDWL YNG+ VV K A+EFT++ GR+RV+ +MD+ELAV+A E + ++H+V+FSGDG Sbjct: 59 PLLDWLDYNGYSVVTKPAREFTDSQGRRRVRGNMDIELAVNAMELAGHVDHIVLFSGDGD 118 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 F +LV A+QRK +VT+VS++ + P M +D+LRRQAD F+DL L+ + RDP + Sbjct: 119 FRSLVEAIQRKGVRVTVVSSIHTQPPMIADELRRQADVFLDLVDLQGRVGRDPAD 173 >gi|83311350|ref|YP_421614.1| hypothetical protein amb2251 [Magnetospirillum magneticum AMB-1] gi|82946191|dbj|BAE51055.1| Uncharacterized conserved protein [Magnetospirillum magneticum AMB-1] Length = 187 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 91/176 (51%), Positives = 133/176 (75%), Gaps = 2/176 (1%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 F E++ LFIDG+NLY++++ALGFDIDY+KLL F + +IRA+YYT ++ D Q++S Sbjct: 3 FYSAERLGLFIDGSNLYSAARALGFDIDYKKLLNLFAGKGRLIRAFYYTALMED--QEYS 60 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 P+ PL+DWL YNG+ +V K KEFT+ GR+++K +MD+ELA+D E + L+H+V+FSG Sbjct: 61 PIRPLVDWLDYNGYTMVTKPTKEFTDAMGRRKIKGNMDIELAIDVMEMCQYLDHVVLFSG 120 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 DG F LV A+QRK +V++VST+ S P M +D+LRRQAD F++L L+++IAR Sbjct: 121 DGDFRRLVEAVQRKGVRVSVVSTIRSQPPMVADELRRQADVFIELQDLESQIARAQ 176 >gi|46201864|ref|ZP_00208280.1| COG1432: Uncharacterized conserved protein [Magnetospirillum magnetotacticum MS-1] Length = 187 Score = 241 bits (617), Expect = 2e-62, Method: Composition-based stats. Identities = 90/176 (51%), Positives = 133/176 (75%), Gaps = 2/176 (1%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 F E++ LFIDG+NLY+++++LGFDIDY+KLL F + +IRA+YYT ++ D Q++S Sbjct: 3 FYSAERLGLFIDGSNLYSAARSLGFDIDYKKLLNLFAGKGRLIRAFYYTALMED--QEYS 60 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 P+ PL+DWL YNG+ +V K KEFT+ GR+++K +MD+ELA+D E + L+H+V+FSG Sbjct: 61 PIRPLVDWLDYNGYTMVTKPTKEFTDAMGRRKIKGNMDIELAIDVMEMCQYLDHVVLFSG 120 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 DG F LV A+QRK +V++VST+ S P M +D+LRRQAD F++L L+++IAR Sbjct: 121 DGDFRRLVEAVQRKGVRVSVVSTIRSQPPMVADELRRQADVFIELQDLESQIARAQ 176 >gi|197105347|ref|YP_002130724.1| hypothetical protein PHZ_c1884 [Phenylobacterium zucineum HLK1] gi|196478767|gb|ACG78295.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1] Length = 195 Score = 241 bits (616), Expect = 3e-62, Method: Composition-based stats. Identities = 100/180 (55%), Positives = 136/180 (75%), Gaps = 2/180 (1%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 F P +++ALFIDGANLY+++K LGFDIDYRKLL+ FR R++++RAYYYT +V + E +S Sbjct: 3 FYPTDRLALFIDGANLYSAAKNLGFDIDYRKLLEEFRKRSVLVRAYYYTALVENEE--YS 60 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 P+ PL+DWL YNG+++V K A+E+T++ GRKR + MDVE+AVD E + +HLV+FSG Sbjct: 61 PIRPLVDWLDYNGYRLVTKSAREYTDSQGRKRWRGDMDVEIAVDMLEMAAHADHLVLFSG 120 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 DG F LV A+QRK +VT+VST+ S P M SD+LRRQAD F+DLA L + I R + Sbjct: 121 DGDFRALVEAVQRKGSRVTVVSTLKSQPPMVSDELRRQADSFVDLADLADIIGRPSRLPR 180 >gi|304392073|ref|ZP_07374015.1| hypothetical protein R2A130_0742 [Ahrensia sp. R2A130] gi|303296302|gb|EFL90660.1| hypothetical protein R2A130_0742 [Ahrensia sp. R2A130] Length = 199 Score = 241 bits (615), Expect = 4e-62, Method: Composition-based stats. Identities = 105/176 (59%), Positives = 139/176 (78%), Gaps = 2/176 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFD REKIAL IDGANLYA+S+ALGFDIDYR++L AF+ R V+RAYYYT +V D Q++ Sbjct: 1 MFDEREKIALMIDGANLYATSRALGFDIDYRQMLVAFQKRGYVLRAYYYTALVED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++V+ K AKEFT+ GR++VK +MD+ELAVDA + ++ ++H V+FS Sbjct: 59 SAIRPLIDWLDYNGYRVITKPAKEFTDASGRRKVKGNMDIELAVDALDLADTVDHFVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 GDG F LV +LQRK ++VT+VST S P M +D+LRRQAD F+DL L++EI R Sbjct: 119 GDGDFRALVESLQRKGRRVTVVSTTSSQPPMIADELRRQADVFIDLKSLQDEIGRS 174 >gi|315499955|ref|YP_004088758.1| hypothetical protein Astex_2970 [Asticcacaulis excentricus CB 48] gi|315417967|gb|ADU14607.1| hypothetical protein Astex_2970 [Asticcacaulis excentricus CB 48] Length = 189 Score = 241 bits (615), Expect = 4e-62, Method: Composition-based stats. Identities = 102/180 (56%), Positives = 133/180 (73%), Gaps = 3/180 (1%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 F P +KIALFIDGANLY+++KAL FDIDYRKLL FR R I++RAYYYT +V + +S Sbjct: 3 FYPTDKIALFIDGANLYSAAKALNFDIDYRKLLDEFRKRGILLRAYYYTALVEGDD--YS 60 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 P+ PL+DWL YNGF ++ K AKE+T+ GRKR + MD+E+A D E +E +HLV+FSG Sbjct: 61 PIRPLVDWLDYNGFALITKTAKEYTDAQGRKRWRGDMDIEIACDMMEIAEHADHLVLFSG 120 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 DG F L+ A+QRK +VT+VSTV S P M SD+LRRQAD F+DLA L + + R P + + Sbjct: 121 DGDFRRLIEAVQRKGCRVTVVSTVKSQPPMTSDELRRQADTFVDLADLASVVGR-PRQQQ 179 >gi|239787551|emb|CAX84020.1| conserved uncharacterized protein [uncultured bacterium] Length = 206 Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats. Identities = 100/189 (52%), Positives = 140/189 (74%), Gaps = 10/189 (5%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 +F P+E++ALFIDG+NLYA+++ALGFDIDY++LL+ F + +IRA+YYT +V D Q++ Sbjct: 2 VFYPQERVALFIDGSNLYAAARALGFDIDYKRLLQMFAGKGRLIRAFYYTALVED--QEY 59 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWL YNG+ +V K KEFT+ GR+++K +MD+ELA+D E SE L+H+V+FS Sbjct: 60 SPIRPLVDWLDYNGYTMVTKPTKEFTDASGRRKIKGNMDIELAIDVMEMSEHLDHIVLFS 119 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD---- 176 GDG F LV A+QRK +VT+VSTV S P M +D+LRRQAD F++L L+ I R Sbjct: 120 GDGDFRRLVDAVQRKGVRVTVVSTVRSQPPMVADELRRQADNFVELQDLQPSIERTIANR 179 Query: 177 ----PDEDK 181 P ED+ Sbjct: 180 EHGAPREDR 188 >gi|170738400|ref|YP_001767055.1| hypothetical protein M446_0033 [Methylobacterium sp. 4-46] gi|168192674|gb|ACA14621.1| protein of unknown function DUF88 [Methylobacterium sp. 4-46] Length = 216 Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats. Identities = 98/176 (55%), Positives = 135/176 (76%), Gaps = 2/176 (1%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 ++ ALFIDGAN+YA++KALGFDIDYRKLL FRSR +IRA+YYT ++ D Q++S + P Sbjct: 4 QRSALFIDGANVYATTKALGFDIDYRKLLADFRSRENLIRAFYYTALIED--QEYSSIRP 61 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125 L+DWL YNG++VV K AKEFT++ GR+++K +MD+EL +DA E S ++H+V+FSGDG F Sbjct: 62 LIDWLDYNGYRVVTKPAKEFTDSTGRRKIKGNMDIELTIDALELSPYIDHMVLFSGDGDF 121 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 LVAA+QR+ +VT+VST+ + P M SD LRRQAD F+D+ +L I RD + Sbjct: 122 KPLVAAMQRRGVRVTVVSTIQTQPPMVSDDLRRQADDFVDIVHLIPRIGRDQSDRP 177 >gi|310815107|ref|YP_003963071.1| hypothetical protein EIO_0609 [Ketogulonicigenium vulgare Y25] gi|308753842|gb|ADO41771.1| conserved hypothetical protein [Ketogulonicigenium vulgare Y25] Length = 196 Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 96/182 (52%), Positives = 133/182 (73%), Gaps = 2/182 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E+IALFIDGANLYA+SK+LGFDIDY+ L F R +IRA+YYT ++ + E + Sbjct: 1 MFYRDERIALFIDGANLYAASKSLGFDIDYKLLRSEFMRRGRLIRAFYYTALLENEE--Y 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNGF + K AKEF + GR+++K +MD+EL VDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLHYNGFSMRTKPAKEFQDAQGRRKIKGNMDIELTVDAMELAPHVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F L+ ALQR+ +V++VSTV S P M +D+LRRQAD F++L L++ + R P D Sbjct: 119 GDGDFRPLIEALQRRGVRVSVVSTVRSQPPMIADELRRQADNFIELDELRDVLGRPPRPD 178 Query: 181 KK 182 + Sbjct: 179 AR 180 >gi|220920088|ref|YP_002495389.1| hypothetical protein Mnod_0035 [Methylobacterium nodulans ORS 2060] gi|219944694|gb|ACL55086.1| protein of unknown function DUF88 [Methylobacterium nodulans ORS 2060] Length = 219 Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats. Identities = 97/176 (55%), Positives = 135/176 (76%), Gaps = 2/176 (1%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 ++ ALFIDGAN+YA++KALGFDIDYRKLL F++R +IRA+YYT +V D Q++S + P Sbjct: 4 QRSALFIDGANVYATTKALGFDIDYRKLLADFKARENLIRAFYYTALVED--QEYSSIRP 61 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125 L+DWL YNG++VV K AKEFT++ GR++VK +MD+EL +DA E S ++H+V+FSGDG F Sbjct: 62 LIDWLDYNGYRVVTKPAKEFTDSSGRRKVKGNMDIELTIDALELSPYIDHMVLFSGDGDF 121 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 LVAA+QR+ +VT+VST+ + P M +D LRRQAD F+D+ +L I RD + Sbjct: 122 KPLVAAMQRRGVRVTVVSTIQTQPPMVADDLRRQADDFVDIVHLIPRIGRDQSDRP 177 >gi|254418577|ref|ZP_05032301.1| conserved hypothetical protein [Brevundimonas sp. BAL3] gi|196184754|gb|EDX79730.1| conserved hypothetical protein [Brevundimonas sp. BAL3] Length = 180 Score = 238 bits (607), Expect = 3e-61, Method: Composition-based stats. Identities = 86/176 (48%), Positives = 122/176 (69%), Gaps = 2/176 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF +++A+FIDG+NLY++++AL D+D++++L FR ++I+ RAYYYT VV ++F Sbjct: 1 MFHSTDRLAIFIDGSNLYSAARALQHDMDFKRMLDWFREKSILTRAYYYTAVVE--GEEF 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWL YNGF VV K K FT+ G R+K +MD+E+AVD E + L+H V+FS Sbjct: 59 SPVKPLVDWLDYNGFSVVTKPVKRFTDGQGHSRIKGNMDIEIAVDMLELAPRLDHAVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 GDG F LV A+Q +VT+VST + P +D+LRRQAD F+DL L E R Sbjct: 119 GDGDFRRLVQAVQALGVRVTVVSTQKTQPPHIADELRRQADAFLDLNDLMAEFCRP 174 >gi|148259544|ref|YP_001233671.1| hypothetical protein Acry_0528 [Acidiphilium cryptum JF-5] gi|326402750|ref|YP_004282831.1| hypothetical protein ACMV_06020 [Acidiphilium multivorum AIU301] gi|146401225|gb|ABQ29752.1| protein of unknown function DUF88 [Acidiphilium cryptum JF-5] gi|325049611|dbj|BAJ79949.1| hypothetical protein ACMV_06020 [Acidiphilium multivorum AIU301] Length = 190 Score = 238 bits (607), Expect = 3e-61, Method: Composition-based stats. Identities = 92/178 (51%), Positives = 131/178 (73%), Gaps = 3/178 (1%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 P+EK ALFIDGANLYA+S+ALGFD+DYR+LL F R ++RAYYY+ ++ +++SPL Sbjct: 5 PQEKTALFIDGANLYAASRALGFDVDYRRLLDFF-DRVNLVRAYYYSALL--DTEEYSPL 61 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 PL DWL YNG+ +V K AKEFT+ GR+RVK +MD+ELA+D E + ++H ++FSGD Sbjct: 62 KPLTDWLAYNGYTLVTKPAKEFTDGAGRRRVKGNMDIELAIDMLEMAPHIDHAILFSGDS 121 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 F LV A+QR+ +V+++ST+ + P M +D+LRRQ+D F+DLA + NE R E + Sbjct: 122 DFRRLVEAVQRRGVRVSVISTIKTSPPMIADELRRQSDQFVDLADIANEFTRRQTEPR 179 >gi|323139351|ref|ZP_08074403.1| protein of unknown function DUF88 [Methylocystis sp. ATCC 49242] gi|322395417|gb|EFX97966.1| protein of unknown function DUF88 [Methylocystis sp. ATCC 49242] Length = 215 Score = 237 bits (606), Expect = 5e-61, Method: Composition-based stats. Identities = 96/175 (54%), Positives = 131/175 (74%), Gaps = 2/175 (1%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 +E+IALFIDGANLY ++K FDIDYR+LL F R +IRA+YYT V+ D E FS + Sbjct: 4 QERIALFIDGANLYQAAKTQSFDIDYRRLLSEFEQRGRLIRAFYYTAVIEDEE--FSSIR 61 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 PL+DWL YNG+ VV K AK F + G +++K +MDVELAVDA ++ ++H+ +FSGDG Sbjct: 62 PLIDWLDYNGYAVVTKPAKAFVDATGHRKIKGNMDVELAVDAMGMADHIDHMWLFSGDGD 121 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 F +LVAA+QRK +V++VST+ + PSM +D+LRRQAD +DLA L ++I RDP+E Sbjct: 122 FCSLVAAVQRKGVRVSVVSTITTRPSMLADELRRQADEVIDLADLADKIGRDPNE 176 >gi|114327650|ref|YP_744807.1| putative cytoplasmic protein [Granulibacter bethesdensis CGDNIH1] gi|114315824|gb|ABI61884.1| hypothetical cytosolic protein [Granulibacter bethesdensis CGDNIH1] Length = 195 Score = 237 bits (605), Expect = 6e-61, Method: Composition-based stats. Identities = 92/180 (51%), Positives = 131/180 (72%), Gaps = 2/180 (1%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 F P E+IALFIDGANLY++S+ LGF++DYR LL FRSR+ ++RAYYY+ V+ E +S Sbjct: 3 FLPTERIALFIDGANLYSASRNLGFEVDYRNLLSTFRSRSQLVRAYYYSAVLETEE--YS 60 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 PL PL DWL YNG+ +V K A+EFT++ GR+R+K +MD+ELAVD E ++ ++H V+FSG Sbjct: 61 PLKPLTDWLAYNGYNLVTKPAREFTDSSGRRRIKGNMDIELAVDMMEIADRIDHAVLFSG 120 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 D F +V A+QRK +V++VS++ + P M +D LRRQAD F++LA + R E + Sbjct: 121 DADFRRVVEAVQRKGVRVSVVSSIRTSPPMIADDLRRQADEFLELADIATFFTRRQMEPR 180 >gi|114770098|ref|ZP_01447636.1| hypothetical protein OM2255_10695 [alpha proteobacterium HTCC2255] gi|114548935|gb|EAU51818.1| hypothetical protein OM2255_10695 [alpha proteobacterium HTCC2255] Length = 174 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 91/176 (51%), Positives = 132/176 (75%), Gaps = 2/176 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M E+ ALFIDG+NL+AS+KAL +IDY+KL F R ++RAYYYT ++ + E Sbjct: 1 MNYSDERTALFIDGSNLHASAKALNLEIDYKKLKNEFIKRGKLLRAYYYTALIENEEN-- 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SPL PL+DWL YNG+ +V+K AKEFT++ G+KR+K +MD+ELA+DA E + +EH++IFS Sbjct: 59 SPLRPLVDWLTYNGYTIVSKPAKEFTDSAGQKRIKGNMDIELAIDAMELAPNVEHIIIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 GDG F +LV +LQR+ +V++VST S P M +D+LRRQAD ++DL L++ I+++ Sbjct: 119 GDGDFQSLVKSLQRQGVRVSVVSTTRSHPPMIADELRRQADNYIDLEELRDVISQN 174 >gi|117925174|ref|YP_865791.1| hypothetical protein Mmc1_1877 [Magnetococcus sp. MC-1] gi|117608930|gb|ABK44385.1| protein of unknown function DUF88 [Magnetococcus sp. MC-1] Length = 194 Score = 234 bits (597), Expect = 5e-60, Method: Composition-based stats. Identities = 86/177 (48%), Positives = 128/177 (72%), Gaps = 3/177 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 +F E++ +FIDG+NLYA+ ++LGFD DY+KLL+ FRS+A +IRAYY+T + D Q++ Sbjct: 10 IFRQDERVMVFIDGSNLYAAIRSLGFDFDYKKLLRYFRSQANLIRAYYFTALGDD--QEY 67 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTEN-CGRKRVKSSMDVELAVDAFEQSEGLEHLVIF 119 SP+ PL+DWL YNG+ VV K KE+ + G KR K +MD+E+AVD + + +H V+F Sbjct: 68 SPIRPLVDWLAYNGYAVVTKPIKEYVDPVTGHKRTKGNMDIEIAVDMMKLAPYYDHAVLF 127 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 SGDG F ++V Q + K VT+VS++++ P M +D+LRRQADYF++L +K + RD Sbjct: 128 SGDGDFRSVVEVAQGQGKVVTVVSSLMTQPPMIADELRRQADYFIELNRIKEHLQRD 184 >gi|27377446|ref|NP_768975.1| hypothetical protein bll2335 [Bradyrhizobium japonicum USDA 110] gi|27350590|dbj|BAC47600.1| bll2335 [Bradyrhizobium japonicum USDA 110] Length = 203 Score = 233 bits (595), Expect = 7e-60, Method: Composition-based stats. Identities = 101/177 (57%), Positives = 137/177 (77%), Gaps = 3/177 (1%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 EKIALFIDG+NL+A+SKALGFDIDYR+LL F+SR ++RA+YYTT++ D Q++S + P Sbjct: 5 EKIALFIDGSNLHATSKALGFDIDYRRLLGEFQSRGALLRAFYYTTLIED--QEYSSIRP 62 Query: 66 LLDWLHYNGFQVVAKVAKEFTEN-CGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 L+DWL YNG+ VV K KEF + GR++VK SMDV+LAV+A E +E ++ +V+FSGDG Sbjct: 63 LIDWLDYNGYTVVTKFTKEFVDAITGRRKVKGSMDVDLAVNAMELAEHVDQIVLFSGDGN 122 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 F +LV ALQR+ +VT+VST+ + P+M +D LRRQAD F+DLA LK ++ RDP Sbjct: 123 FRSLVEALQRRGVRVTVVSTLCTQPAMVADDLRRQADVFIDLAELKPKVGRDPANRP 179 >gi|83858189|ref|ZP_00951711.1| hypothetical protein OA2633_01781 [Oceanicaulis alexandrii HTCC2633] gi|83853012|gb|EAP90864.1| hypothetical protein OA2633_01781 [Oceanicaulis alexandrii HTCC2633] Length = 190 Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 90/178 (50%), Positives = 133/178 (74%), Gaps = 2/178 (1%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 F P EK+ LFIDGANLY++++ L FDIDY++LL+ FR R +IRA YYT ++ ++++ Sbjct: 3 FYPNEKLGLFIDGANLYSAARNLDFDIDYKRLLEEFRKRGRLIRANYYTALIE--SEEYT 60 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 P+ PL+DWL YNGF+V+ K AKE+T++ GR+R+K MDV+LA+D E ++ L+H+V+FSG Sbjct: 61 PIRPLIDWLDYNGFKVITKAAKEYTDDSGRRRIKGDMDVDLAIDVMEAADYLDHIVLFSG 120 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 DG F +V A+QRK +V++VST+ S P MA+D LRRQAD F++L L + R+ + Sbjct: 121 DGDFKKVVEAVQRKGVRVSVVSTLKSSPPMAADDLRRQADTFIELQDLGKLVGRERRQ 178 >gi|329890088|ref|ZP_08268431.1| hypothetical protein BDIM_17840 [Brevundimonas diminuta ATCC 11568] gi|328845389|gb|EGF94953.1| hypothetical protein BDIM_17840 [Brevundimonas diminuta ATCC 11568] Length = 193 Score = 232 bits (593), Expect = 1e-59, Method: Composition-based stats. Identities = 88/174 (50%), Positives = 119/174 (68%), Gaps = 2/174 (1%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 P ++IALFIDGANLY++++AL D+D++KL F +IRAYYYT ++ ++FSP Sbjct: 4 HPDDRIALFIDGANLYSAARALNCDLDFKKLSTWFVGEGRLIRAYYYTAIIE--GEEFSP 61 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122 + PL+DWL YNGF VV K K FT+ G R K +MD+E+AVD E + L+ V+FSGD Sbjct: 62 VRPLVDWLDYNGFTVVTKPVKRFTDAQGHSRTKGNMDMEIAVDMLELAPRLDQAVLFSGD 121 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 G F +V ALQ K +VT+VSTV S P SD LRRQAD F+DLA + N++ + Sbjct: 122 GDFRRVVQALQAKGVRVTVVSTVKSQPPQISDDLRRQADAFVDLADIMNQVGKP 175 >gi|258541738|ref|YP_003187171.1| hypothetical protein APA01_06420 [Acetobacter pasteurianus IFO 3283-01] gi|256632816|dbj|BAH98791.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01] gi|256635873|dbj|BAI01842.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-03] gi|256638928|dbj|BAI04890.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-07] gi|256641982|dbj|BAI07937.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-22] gi|256645037|dbj|BAI10985.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-26] gi|256648092|dbj|BAI14033.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-32] gi|256651145|dbj|BAI17079.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654136|dbj|BAI20063.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-12] Length = 207 Score = 231 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 81/181 (44%), Positives = 125/181 (69%), Gaps = 2/181 (1%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 EK LFIDG++LY++S++LGFD+DY+KLL F ++ +IRAYYY ++ + +S Sbjct: 3 LQKTEKTCLFIDGSSLYSTSRSLGFDVDYKKLLDFFAAKTHIIRAYYYAAIL--DTEDYS 60 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 PL PL DWL YNG+ +V K A+EFT++ G++RVK +MD+E+AVD E + ++H ++FSG Sbjct: 61 PLKPLTDWLSYNGYFLVTKPAREFTDSTGKRRVKGNMDIEIAVDMMEMAPHIDHAILFSG 120 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 D F +V A+QR+ +V++VS++ S P + D LRRQAD F++L+ L R E+ Sbjct: 121 DSDFRRVVEAVQRQGTRVSVVSSMRSTPPLIGDDLRRQADQFLELSALAGNFTRRQTENP 180 Query: 182 K 182 + Sbjct: 181 R 181 >gi|254293927|ref|YP_003059950.1| hypothetical protein Hbal_1565 [Hirschia baltica ATCC 49814] gi|254042458|gb|ACT59253.1| protein of unknown function DUF88 [Hirschia baltica ATCC 49814] Length = 184 Score = 231 bits (590), Expect = 3e-59, Method: Composition-based stats. Identities = 91/174 (52%), Positives = 124/174 (71%), Gaps = 2/174 (1%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 F E+IALFIDGANLY+++K L ++DYR+LL FR + ++RAYYYT ++ + E +S Sbjct: 3 FYKDERIALFIDGANLYSAAKTLNVELDYRRLLSEFRKKGRLLRAYYYTALIENEE--YS 60 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 P+ PL+DWL YNG+ VV K AKEFT+ GR+RVK MDVE+AVD ++ L+H ++FSG Sbjct: 61 PIRPLVDWLQYNGYNVVTKPAKEFTDAAGRRRVKGDMDVEIAVDMLTLADKLDHAILFSG 120 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 DG T LV ALQ + +V++VS+V + P M SD LRR AD F+DL+ L I R Sbjct: 121 DGDLTVLVKALQNRGLRVSVVSSVKTQPPMISDDLRRSADNFIDLSDLVKIIGR 174 >gi|329114476|ref|ZP_08243238.1| Hypothetical protein APO_1273 [Acetobacter pomorum DM001] gi|326696552|gb|EGE48231.1| Hypothetical protein APO_1273 [Acetobacter pomorum DM001] Length = 207 Score = 231 bits (589), Expect = 4e-59, Method: Composition-based stats. Identities = 81/181 (44%), Positives = 125/181 (69%), Gaps = 2/181 (1%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 EK LFIDG++LY++S++LGFD+DY+KLL F ++ +IRAYYY ++ + +S Sbjct: 3 LQKTEKTCLFIDGSSLYSTSRSLGFDVDYKKLLDFFAAKTHIIRAYYYAAIL--DTEDYS 60 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 PL PL DWL YNG+ +V K A+EFT++ G++RVK +MD+E+AVD E + ++H ++FSG Sbjct: 61 PLKPLTDWLSYNGYFLVTKPAREFTDSTGKRRVKGNMDIEIAVDMLEMAPHIDHAILFSG 120 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 D F +V A+QR+ +V++VS++ S P + D LRRQAD F++L+ L R E+ Sbjct: 121 DSDFRRVVEAVQRQGTRVSVVSSMRSTPPLIGDDLRRQADQFLELSALAGNFTRRQTENP 180 Query: 182 K 182 + Sbjct: 181 R 181 >gi|162147943|ref|YP_001602404.1| hypothetical protein GDI_2159 [Gluconacetobacter diazotrophicus PAl 5] gi|161786520|emb|CAP56102.1| conserved hypothetical protein [Gluconacetobacter diazotrophicus PAl 5] Length = 210 Score = 230 bits (587), Expect = 7e-59, Method: Composition-based stats. Identities = 84/180 (46%), Positives = 127/180 (70%), Gaps = 2/180 (1%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 F P E++ LFIDGA+LY++S+ LGFD+DYR LL FRS+ VIRAYYY+ ++ +++S Sbjct: 10 FQPNERVCLFIDGASLYSASRHLGFDVDYRNLLTFFRSKCHVIRAYYYSAILE--SEEYS 67 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 PL PL DWL YNG+ +V K A+EF ++ GR+RVK +MD+ELAVD E + ++H V+FSG Sbjct: 68 PLKPLTDWLVYNGYFLVTKTAREFVDHNGRRRVKGNMDIELAVDMMEMAPRIDHAVLFSG 127 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 D F L+ +QR+ + +++S++ + P + D+LRRQAD F++LA + + R E + Sbjct: 128 DADFRRLLETVQRQGVRTSVISSIRTSPPLIGDELRRQADQFIELADIAPQFTRRQAEAR 187 >gi|144899867|emb|CAM76731.1| protein containing DUF88 [Magnetospirillum gryphiswaldense MSR-1] Length = 193 Score = 229 bits (584), Expect = 1e-58, Method: Composition-based stats. Identities = 94/174 (54%), Positives = 132/174 (75%), Gaps = 2/174 (1%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 F E++ LFIDG+NLYA++KALGFDIDY++LL F ++ +IRA+YYT +V D Q++S Sbjct: 8 FYDSERVGLFIDGSNLYAAAKALGFDIDYKRLLDHFATKGRLIRAFYYTALVED--QEYS 65 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 P+ PL+DWL YNG+ +V K KEFT+ GR+++K +MD+ELA+D E + L+H+V+FSG Sbjct: 66 PIRPLVDWLDYNGYTMVTKPTKEFTDAAGRRKIKGNMDIELAIDVMEMAPHLDHVVLFSG 125 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 DG F LV A+QRK +VT+VSTV S P M +D+LRRQAD F++L L++ I R Sbjct: 126 DGDFRRLVEAIQRKGVRVTVVSTVRSQPPMVADELRRQADSFLELLDLESIIGR 179 >gi|209542561|ref|YP_002274790.1| hypothetical protein Gdia_0379 [Gluconacetobacter diazotrophicus PAl 5] gi|209530238|gb|ACI50175.1| protein of unknown function DUF88 [Gluconacetobacter diazotrophicus PAl 5] Length = 203 Score = 228 bits (581), Expect = 3e-58, Method: Composition-based stats. Identities = 84/180 (46%), Positives = 127/180 (70%), Gaps = 2/180 (1%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 F P E++ LFIDGA+LY++S+ LGFD+DYR LL FRS+ VIRAYYY+ ++ +++S Sbjct: 3 FQPNERVCLFIDGASLYSASRHLGFDVDYRNLLTFFRSKCHVIRAYYYSAILE--SEEYS 60 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 PL PL DWL YNG+ +V K A+EF ++ GR+RVK +MD+ELAVD E + ++H V+FSG Sbjct: 61 PLKPLTDWLVYNGYFLVTKTAREFVDHNGRRRVKGNMDIELAVDMMEMAPRIDHAVLFSG 120 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 D F L+ +QR+ + +++S++ + P + D+LRRQAD F++LA + + R E + Sbjct: 121 DADFRRLLETVQRQGVRTSVISSIRTSPPLIGDELRRQADQFIELADIAPQFTRRQAEAR 180 >gi|296115034|ref|ZP_06833676.1| hypothetical protein GXY_04609 [Gluconacetobacter hansenii ATCC 23769] gi|295978371|gb|EFG85107.1| hypothetical protein GXY_04609 [Gluconacetobacter hansenii ATCC 23769] Length = 204 Score = 227 bits (579), Expect = 7e-58, Method: Composition-based stats. Identities = 84/180 (46%), Positives = 130/180 (72%), Gaps = 2/180 (1%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 F P+E++ LFIDG +LY++S+ LGF++DYRKLL FRS++ V+RAYYY+ V+ E +S Sbjct: 3 FQPQERLCLFIDGTSLYSASRNLGFEVDYRKLLSFFRSKSNVLRAYYYSAVLETEE--YS 60 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 PL PL DWL YNG+ +V K A+E+T++ GR+RVK +MD+ELAVD E + ++H V+FSG Sbjct: 61 PLKPLTDWLVYNGYFLVTKTAREYTDHTGRRRVKGNMDIELAVDMLEMAPRIDHAVLFSG 120 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 D L+ A+QR+ + T+++++ + P + D+LRRQAD F++LA + + R E++ Sbjct: 121 DADSRRLLEAVQRQGVRTTVIASIKTSPPLIGDELRRQADQFIELADIASHFTRRQIENR 180 >gi|330993366|ref|ZP_08317301.1| hypothetical protein SXCC_03264 [Gluconacetobacter sp. SXCC-1] gi|329759396|gb|EGG75905.1| hypothetical protein SXCC_03264 [Gluconacetobacter sp. SXCC-1] Length = 202 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 82/180 (45%), Positives = 128/180 (71%), Gaps = 2/180 (1%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 F P+E++ LFIDG +LY++S+ LGF++DYRKLL+ FR+++ V+RAYYY+ V+ +++S Sbjct: 3 FQPQERLCLFIDGTSLYSASRNLGFEVDYRKLLQFFRAKSNVLRAYYYSAVL--DTEEYS 60 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 PL PL DWL YNG+ +V K A+EF ++ GR+RV+ +MDVEL VD E + ++H V+FSG Sbjct: 61 PLKPLTDWLVYNGYTLVTKNAREFIDHNGRRRVRGNMDVELTVDMMEMAPHIDHAVLFSG 120 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 D F L+ ++QR+ + T+V ++ + P + D+LRRQAD F++LA + R E + Sbjct: 121 DSDFRRLLESVQRQGVRTTVVGSIKTTPPLIGDELRRQADQFIELADISANFMRRHIESR 180 >gi|114800400|ref|YP_759598.1| hypothetical protein HNE_0871 [Hyphomonas neptunium ATCC 15444] gi|114740574|gb|ABI78699.1| conserved hypothetical protein [Hyphomonas neptunium ATCC 15444] Length = 189 Score = 224 bits (571), Expect = 5e-57, Method: Composition-based stats. Identities = 90/178 (50%), Positives = 129/178 (72%), Gaps = 2/178 (1%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 F E++ALFIDGANLY++++A+G +ID+RKLLK F+SR ++RA YYT +V E +S Sbjct: 3 FYKDERLALFIDGANLYSAARAVGLEIDFRKLLKEFQSRGRLVRASYYTALVESDE--YS 60 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 P+ PL+DWL YNGF VV K A+EF + GRKRV+ +MDVELAVD E + +H+V+FSG Sbjct: 61 PIRPLVDWLAYNGFNVVKKPAREFVDREGRKRVRGNMDVELAVDMLEAAAYCDHIVLFSG 120 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 +G F LV A++ + +V++VST+ + P M SD LRR+AD F++L L + +AR + Sbjct: 121 NGDFRRLVEAVKARGVRVSVVSTMNATPPMISDDLRREADTFIELTDLGDLVARPRRD 178 >gi|304321225|ref|YP_003854868.1| hypothetical protein PB2503_08354 [Parvularcula bermudensis HTCC2503] gi|303300127|gb|ADM09726.1| hypothetical protein PB2503_08354 [Parvularcula bermudensis HTCC2503] Length = 206 Score = 221 bits (563), Expect = 4e-56, Method: Composition-based stats. Identities = 84/181 (46%), Positives = 127/181 (70%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 DP +K A+FIDGANLY +++ LGFDIDY++LL+ R+ ++RAYYYT + + EQ +S Sbjct: 3 LDPDDKTAIFIDGANLYKTARNLGFDIDYKRLLQKTRAETRLVRAYYYTAMPEEREQDYS 62 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 PL PL+DWL YNG+ ++ K A+EFT++ GRKR + S+D++LA+D E ++ ++ LV+F+G Sbjct: 63 PLRPLVDWLDYNGYTMMTKAAREFTDSQGRKRFRGSVDIDLALDFVEMADKVDCLVLFTG 122 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 +G F +A Q + +V VST + P MASD +RRQAD F+DL L++ I R + Sbjct: 123 NGDFRPAIAKAQSRGCRVICVSTTATQPPMASDDIRRQADQFVDLTSLEDVIGRKSTSHR 182 Query: 182 K 182 + Sbjct: 183 R 183 >gi|307322655|ref|ZP_07601988.1| protein of unknown function DUF88 [Sinorhizobium meliloti AK83] gi|306891701|gb|EFN22554.1| protein of unknown function DUF88 [Sinorhizobium meliloti AK83] Length = 200 Score = 221 bits (563), Expect = 4e-56, Method: Composition-based stats. Identities = 97/181 (53%), Positives = 139/181 (76%), Gaps = 2/181 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFD REKIALFIDG +L+++S++LGF+IDYR++L+AFR R ++R Y YT V+ D + Sbjct: 1 MFDSREKIALFIDGPSLFSASRSLGFEIDYRRVLEAFRRRGYLLRVYLYTAVIEDDAHK- 59 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 + +DWL YNG+QVV KVA +FT+ G++++K +M +ELA+DA EQ+ ++HLVI + Sbjct: 60 -SMRSWIDWLDYNGYQVVTKVAVKFTDFAGQQKIKGNMALELAIDAMEQASNVDHLVIVT 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GD F LV A+QRK +KV+IVST+LS P M +D LRRQAD+F+DLA L++EIAR+P + Sbjct: 119 GDSVFLALVEAIQRKGRKVSIVSTMLSRPPMVADDLRRQADHFIDLATLQHEIAREPSKY 178 Query: 181 K 181 + Sbjct: 179 R 179 >gi|22298293|ref|NP_681540.1| hypothetical protein tlr0751 [Thermosynechococcus elongatus BP-1] gi|22294472|dbj|BAC08302.1| tlr0751 [Thermosynechococcus elongatus BP-1] Length = 227 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 57/178 (32%), Positives = 94/178 (52%), Gaps = 12/178 (6%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 + R ++A+FIDG+NL+ ++ LG +IDY KLL + + R+++YT V E+Q Sbjct: 15 VLQNRGRVAIFIDGSNLFYAALQLGIEIDYSKLLCHLTQGSRLFRSFFYTGVDPTNEKQ- 73 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 L W+ NG++VV+K + + K+++DVE+AVD + ++ S Sbjct: 74 ---QGFLLWMRRNGYRVVSKELVQLPDGS----KKANLDVEIAVDMMALVGCYDTAILVS 126 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178 GDG V A+ + +V +VS SM SD L AD ++DL ++ EI + P Sbjct: 127 GDGDLAYAVDAVSYRGARVEVVSL----RSMTSDSLINVADRYIDLESIREEIQKAPR 180 >gi|114570128|ref|YP_756808.1| hypothetical protein Mmar10_1578 [Maricaulis maris MCS10] gi|114340590|gb|ABI65870.1| protein of unknown function DUF88 [Maricaulis maris MCS10] Length = 179 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 87/177 (49%), Positives = 130/177 (73%), Gaps = 2/177 (1%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 F P E+I LFIDGANL++++KAL FDID+++LL+ FR R +IRA YYT ++ ++++ Sbjct: 3 FYPDERIGLFIDGANLFSTTKALDFDIDFKRLLEEFRKRGKLIRANYYTALLE--HEEYN 60 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 PL PL+DWL YNGF V+ K AKE+T++ GR+R+K MD+ELAVD E + L+H+++F+G Sbjct: 61 PLRPLVDWLDYNGFSVITKPAKEYTDDHGRRRIKGDMDIELAVDMLEAATYLDHIILFTG 120 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178 DG F +AA + K ++++VS++ + PSM SD LRR+AD F++L L+ I R P Sbjct: 121 DGDFRYALAAARAKGARISVVSSLKTSPSMISDDLRREADAFIELDDLRAMIGRAPA 177 >gi|312114148|ref|YP_004011744.1| hypothetical protein Rvan_1386 [Rhodomicrobium vannielii ATCC 17100] gi|311219277|gb|ADP70645.1| hypothetical protein Rvan_1386 [Rhodomicrobium vannielii ATCC 17100] Length = 178 Score = 213 bits (544), Expect = 6e-54, Method: Composition-based stats. Identities = 83/177 (46%), Positives = 118/177 (66%), Gaps = 2/177 (1%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 F E++ LF+DG NL+A+++ LGF IDY LL+ FR+ +IR YY + D S Sbjct: 3 FYQNERLGLFLDGPNLFAAARTLGFMIDYGSLLRLFRNSGQLIRVNYYLPIADDF--ATS 60 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 PL + DWL YNG+ V+ K AK++ + GR+++KS MD+ELAVDA + L+H+V+FSG Sbjct: 61 PLRGVSDWLQYNGYTVITKPAKDYVDANGRRKIKSGMDIELAVDALSLANSLDHIVLFSG 120 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178 G F LV+ALQR+ ++VT+VST+ + P + +D LRR AD F+DLA L I R P Sbjct: 121 LGDFCGLVSALQRRGRRVTVVSTIRTQPPIVADDLRRMADQFIDLADLAPMIGRAPA 177 >gi|254461881|ref|ZP_05075297.1| hypothetical protein RB2083_2472 [Rhodobacterales bacterium HTCC2083] gi|206678470|gb|EDZ42957.1| hypothetical protein RB2083_2472 [Rhodobacteraceae bacterium HTCC2083] Length = 200 Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 73/176 (41%), Positives = 115/176 (65%), Gaps = 2/176 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E+IA+FIDG +L+A SKALGFDID++ K F R + + Y+TT+V ++F Sbjct: 1 MFYKDERIAVFIDGKSLFACSKALGFDIDFKLFRKEFSQRGKLNKLSYFTTLV--DSEEF 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG+ V K KE+ + GR++VK ++ VE+ + + ++H++I + Sbjct: 59 SSVKPLVDWLSYNGYNTVTKPVKEYVDTAGRRKVKGNISVEMTIAVLDMVPFVDHIIIVT 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 GD F LV A+Q++ +V++VS++ P M SD LRRQAD F++L L++ I + Sbjct: 119 GDKDFKPLVEAVQQRGTRVSVVSSIRVQPPMLSDDLRRQADNFIELDELRSVIEKP 174 >gi|294084108|ref|YP_003550866.1| hypothetical protein SAR116_0539 [Candidatus Puniceispirillum marinum IMCC1322] gi|292663681|gb|ADE38782.1| Protein of unknown function DUF88 [Candidatus Puniceispirillum marinum IMCC1322] Length = 183 Score = 211 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 76/178 (42%), Positives = 118/178 (66%), Gaps = 3/178 (1%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 +K ALFIDG+N YA+++AL DID+ ++ F +IRAYYYT + D Q+FS L Sbjct: 1 MDKTALFIDGSNFYAAARALNLDIDFARMRTHFAKDTNLIRAYYYTAIPED--QEFSSLR 58 Query: 65 PLLDWLHYNGFQVVAKVAKEFTEN-CGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 PL+DWL YNG+ VV+K+ +EF + GR+R+K +MD+ELA+D + + ++H ++FSGDG Sbjct: 59 PLVDWLDYNGYAVVSKLTREFIDEETGRRRLKGNMDMELALDMLKLAPHIDHAILFSGDG 118 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 F L+ +Q + T+VST + P M +DQLRR AD ++D+A + +I++ + Sbjct: 119 DFCRLLEDVQALGVRTTVVSTNKTSPPMVADQLRRMADVYIDMADIAADISKSSSKAP 176 >gi|58040236|ref|YP_192200.1| hypothetical protein GOX1805 [Gluconobacter oxydans 621H] gi|58002650|gb|AAW61544.1| Hypothetical protein GOX1805 [Gluconobacter oxydans 621H] Length = 202 Score = 211 bits (537), Expect = 4e-53, Method: Composition-based stats. Identities = 79/181 (43%), Positives = 116/181 (64%), Gaps = 2/181 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 + E+ ALFIDGA+L+ +++ LGF++D+R L F S+ + RA+YY + + + Sbjct: 2 LLRQNERTALFIDGASLHHAARNLGFEVDFRSLRNLFESQCLFQRAFYYAAMPETDD--Y 59 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SPL PL DWL YNG+ +V K A+EFT++ GR+R+K +MDVEL VD EQ+ L+H VI S Sbjct: 60 SPLRPLTDWLAYNGYHLVLKNAREFTDHSGRRRIKGNMDVELTVDLLEQASRLDHAVIVS 119 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GD V A+Q + +VT++S++ S P M D LRRQAD F++LA + R E Sbjct: 120 GDSDLRRAVEAVQARGVRVTVISSMRSTPLMIGDDLRRQADLFVELADIAPSFTRRQAEP 179 Query: 181 K 181 + Sbjct: 180 R 180 >gi|282900793|ref|ZP_06308733.1| protein of unknown function DUF88 [Cylindrospermopsis raciborskii CS-505] gi|281194323|gb|EFA69280.1| protein of unknown function DUF88 [Cylindrospermopsis raciborskii CS-505] Length = 251 Score = 211 bits (537), Expect = 5e-53, Method: Composition-based stats. Identities = 56/179 (31%), Positives = 98/179 (54%), Gaps = 12/179 (6%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 + + R ++A+FIDG+NL+ ++ LG +IDY KLL + ++RA++YT V E+Q Sbjct: 58 VLENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTGGSRLLRAFFYTGVDRTNEKQ- 116 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 L W+ NG++V+AK + + K+++DVE+AVD + + V+ S Sbjct: 117 ---QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDMMALVDSYDTAVLVS 169 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG V ++ + +V +VS SM SD L +D ++DL ++ +I + P + Sbjct: 170 GDGDLAYAVNSVSYRGVRVEVVSL----RSMTSDSLINVSDRYIDLEAIREDIQKTPRQ 224 >gi|282896531|ref|ZP_06304551.1| Protein of unknown function DUF88 [Raphidiopsis brookii D9] gi|281198637|gb|EFA73518.1| Protein of unknown function DUF88 [Raphidiopsis brookii D9] Length = 248 Score = 209 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 56/179 (31%), Positives = 98/179 (54%), Gaps = 12/179 (6%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 + + R ++A+FIDG+NL+ ++ LG +IDY KLL + ++RA++YT V E+Q Sbjct: 55 VLENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTGGSRLLRAFFYTGVDRTNEKQ- 113 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 L W+ NG++V+AK + + K+++DVE+AVD + + V+ S Sbjct: 114 ---QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDMMALVDSYDTAVLVS 166 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG V ++ + +V +VS SM SD L +D ++DL ++ +I + P + Sbjct: 167 GDGDLAYAVNSVSYRGVRVEVVSL----RSMTSDSLINVSDRYIDLEAIREDIQKTPRQ 221 >gi|220908708|ref|YP_002484019.1| hypothetical protein Cyan7425_3333 [Cyanothece sp. PCC 7425] gi|219865319|gb|ACL45658.1| protein of unknown function DUF88 [Cyanothece sp. PCC 7425] Length = 207 Score = 209 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 59/178 (33%), Positives = 97/178 (54%), Gaps = 12/178 (6%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 + + R ++A+FIDG+NL+ ++ LG +IDY KLL S + ++R+++YT V E+Q Sbjct: 15 VLENRGRVAIFIDGSNLFYAALQLGIEIDYSKLLCRLTSGSRLLRSFFYTGVDPTNEKQ- 73 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 L W+ NG++V+AK + + K+++DVE+AVD + V+ S Sbjct: 74 ---QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDMMSLVGSYDTGVLVS 126 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178 GDG V A+ + +V +VS SM SD L AD ++DL +K +I + P Sbjct: 127 GDGDLAYAVDAVSYRGVRVEVVSL----RSMTSDSLINVADRYIDLDSIKEDIQKAPR 180 >gi|56750416|ref|YP_171117.1| hypothetical protein syc0407_c [Synechococcus elongatus PCC 6301] gi|81299952|ref|YP_400160.1| hypothetical protein Synpcc7942_1143 [Synechococcus elongatus PCC 7942] gi|56685375|dbj|BAD78597.1| hypothetical protein [Synechococcus elongatus PCC 6301] gi|81168833|gb|ABB57173.1| conserved hypothetical protein [Synechococcus elongatus PCC 7942] Length = 198 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 60/180 (33%), Positives = 97/180 (53%), Gaps = 12/180 (6%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 + + R +IA+FIDG+NL+ ++ LG +IDY KLL + + ++R+++YT V E+Q Sbjct: 16 ILENRGRIAIFIDGSNLFYAALQLGIEIDYTKLLACLTNGSRLLRSFFYTGVDRSNEKQ- 74 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 L W+ NG++VVAK + + K+++DVE+AVD + + V+ S Sbjct: 75 ---QGFLLWMRRNGYRVVAKDLIQLPDGT----KKANLDVEIAVDMLALAGTYDTAVLVS 127 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG V + + +V +VS SM SD L AD ++DL LK I + P + Sbjct: 128 GDGDLAYAVEVVGYRGVRVEVVSL----RSMTSDNLINVADRYIDLESLKASIQKLPRQP 183 >gi|6459785|gb|AAF11547.1|AE002037_8 conserved hypothetical protein [Deinococcus radiodurans R1] Length = 263 Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 62/172 (36%), Positives = 94/172 (54%), Gaps = 7/172 (4%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 E+IALFIDGAN+YA++K LG++ D+RK+L+ F + A+YYT V P Sbjct: 64 MERIALFIDGANVYAAAKRLGWNFDHRKILEHFAGLGALYNAFYYTAV---PWPVDDKQK 120 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 +D L Y G+ V + +E T+ G ++S+D+EL D + V+ SGDG Sbjct: 121 RFVDALTYMGYTVRTRPLRENTDENGDTSRRASLDIELVTDLLTTESRYDVAVLLSGDGD 180 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 F V L+ + KKV + S P M S +LR AD ++DLA ++ ++ R Sbjct: 181 FERPVEVLRARGKKVIVASI----PEMTSAELRNAADEYVDLASIREQVERP 228 >gi|119487031|ref|ZP_01620903.1| hypothetical protein L8106_18981 [Lyngbya sp. PCC 8106] gi|119455960|gb|EAW37094.1| hypothetical protein L8106_18981 [Lyngbya sp. PCC 8106] Length = 205 Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats. Identities = 58/180 (32%), Positives = 96/180 (53%), Gaps = 12/180 (6%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 + + R ++A+FIDG+NL+ ++ LG +IDY KLL + ++R+++YT V E+Q Sbjct: 16 VLENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTGGSRLLRSFFYTGVDRTNEKQ- 74 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 L W+ NG++V+AK + + K+++DVE+AVD + V+ S Sbjct: 75 ---QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDMLALVGSYDTAVLVS 127 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG V + + +V +VS SM SD L AD ++DL +K EI ++P Sbjct: 128 GDGDLAYAVDCVSYRGVRVEVVSL----RSMTSDSLINVADRYIDLENVKEEIQKNPRSP 183 >gi|298492951|ref|YP_003723128.1| hypothetical protein Aazo_4859 ['Nostoc azollae' 0708] gi|298234869|gb|ADI66005.1| protein of unknown function DUF88 ['Nostoc azollae' 0708] Length = 210 Score = 207 bits (527), Expect = 6e-52, Method: Composition-based stats. Identities = 57/179 (31%), Positives = 98/179 (54%), Gaps = 12/179 (6%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 + + R ++A+FIDG+NL+ ++ LG +IDY KLL + ++RA++YT V E+Q Sbjct: 17 VLENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTGGSRLLRAFFYTGVDRTNEKQ- 75 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 L W+ NG++V+AK + + K+++DVE+AVD + + V+ S Sbjct: 76 ---QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDMMALVDSYDTAVLVS 128 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG V ++ + +V +VS SM SD L +D ++DL +K +I + P + Sbjct: 129 GDGDLAYAVNSVSYRGVRVEVVSL----RSMTSDSLINVSDRYIDLEAIKEDIQKTPRQ 183 >gi|284052456|ref|ZP_06382666.1| hypothetical protein AplaP_13393 [Arthrospira platensis str. Paraca] gi|291571487|dbj|BAI93759.1| hypothetical protein [Arthrospira platensis NIES-39] Length = 205 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 59/180 (32%), Positives = 97/180 (53%), Gaps = 12/180 (6%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 + + R ++A+FIDG+NL+ ++ LG +IDY KLL S + ++R+++YT V E+Q Sbjct: 18 ILENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTSGSRLLRSFFYTGVDRTNEKQ- 76 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 L W+ NG++VVAK + + K+++DVE+AVD + V+ S Sbjct: 77 ---QGFLLWMRRNGYRVVAKDLVQLPDGS----KKANLDVEIAVDMIALVGAYDTAVLVS 129 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG V + + +V ++S SM SD L AD ++DL +K+EI + P Sbjct: 130 GDGDLAYAVDCVSYRGVRVEVISL----RSMTSDSLINVADRYIDLEAIKDEIQKTPRSP 185 >gi|37522591|ref|NP_925968.1| hypothetical protein gll3022 [Gloeobacter violaceus PCC 7421] gi|35213592|dbj|BAC90963.1| gll3022 [Gloeobacter violaceus PCC 7421] Length = 216 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 57/176 (32%), Positives = 96/176 (54%), Gaps = 12/176 (6%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 R ++A+FIDG+NL+ ++ LG +IDY KLL + + ++R+++YT V E+Q Sbjct: 19 RGRVAIFIDGSNLFYAALQLGIEIDYTKLLNRLTNGSRLLRSFFYTGVDRANEKQ----Q 74 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 L W+ NG++V+ K + + K+++DVE+AVD + + ++ SGDG Sbjct: 75 GFLLWMRRNGYRVITKDLVQLPDGS----KKANLDVEIAVDMLSLAGSYDTAILVSGDGD 130 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 V A K +V +VS SM SD L AD ++DL +K +I + P ++ Sbjct: 131 LAYAVNAASYKGVRVEVVSL----RSMTSDYLINVADRYIDLEQIKEDIQKAPRQN 182 >gi|240141795|ref|YP_002966303.1| hypothetical protein MexAM1_META2p0024 [Methylobacterium extorquens AM1] gi|240011737|gb|ACS42962.1| hypothetical protein DUF88 [Methylobacterium extorquens AM1] Length = 185 Score = 206 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 84/176 (47%), Positives = 128/176 (72%), Gaps = 3/176 (1%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 + A+FIDGANLY+++KA+GFDIDY+KLL ++ ++R YYT + D E +S L PL Sbjct: 5 RTAVFIDGANLYSTTKAIGFDIDYKKLLAHYKRDG-LLRINYYTALYDDGE--YSSLRPL 61 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126 LDWL YNG++V++K AKE+T++ GR++ K ++D+E+AVDA E + ++ +V+FSGDG F Sbjct: 62 LDWLDYNGYRVISKPAKEWTDSAGRRKTKGNLDIEIAVDALELAPHIDRMVLFSGDGDFR 121 Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182 LV A+QR+ +V +VST+ + P+M SD+LRRQAD F+DLA + I + + + Sbjct: 122 YLVEAMQRRGVRVVVVSTIQTQPAMVSDELRRQADEFVDLAKMMETIGQTDTDRPQ 177 >gi|332707287|ref|ZP_08427340.1| hypothetical protein LYNGBM3L_34690 [Lyngbya majuscula 3L] gi|332354021|gb|EGJ33508.1| hypothetical protein LYNGBM3L_34690 [Lyngbya majuscula 3L] Length = 200 Score = 206 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 56/180 (31%), Positives = 98/180 (54%), Gaps = 12/180 (6%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 + + R ++A+FIDG+NL+ ++ LG +IDY KLL + + ++R+++YT V E+Q Sbjct: 16 VLENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTAGSRLLRSFFYTGVDRTNEKQ- 74 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 L W+ NG++V+AK + + K+++DVE+AVD + V+ S Sbjct: 75 ---QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDMMALVGSYDTAVLVS 127 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG V ++ + +V +VS SM SD L AD ++DL ++ I + P ++ Sbjct: 128 GDGDLAYAVDSVSYRGVRVEVVSL----RSMTSDSLINVADRYIDLDTIQESIQKTPKQN 183 >gi|186680639|ref|YP_001863835.1| hypothetical protein Npun_R0091 [Nostoc punctiforme PCC 73102] gi|186463091|gb|ACC78892.1| protein of unknown function DUF88 [Nostoc punctiforme PCC 73102] Length = 210 Score = 206 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 56/179 (31%), Positives = 98/179 (54%), Gaps = 12/179 (6%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 + + R ++A+FIDG+NL+ ++ LG +IDY KLL + ++R+++YT V E+Q Sbjct: 17 VLENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTGGSRLLRSFFYTGVDRTNEKQ- 75 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 L W+ NG++V+AK + + K+++DVE+AVD + + V+ S Sbjct: 76 ---QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDMMALVDSYDTAVLVS 128 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG V ++ + +V +VS SM SD L +D ++DL +K +I + P + Sbjct: 129 GDGDLAYAVNSVSYRGVRVEVVSL----RSMTSDSLINVSDRYIDLEAIKEDIQKTPRQ 183 >gi|186686260|ref|YP_001869456.1| hypothetical protein Npun_R6229 [Nostoc punctiforme PCC 73102] gi|186468712|gb|ACC84513.1| protein of unknown function DUF88 [Nostoc punctiforme PCC 73102] Length = 231 Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats. Identities = 61/175 (34%), Positives = 95/175 (54%), Gaps = 12/175 (6%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 R ++A+FIDG NL+ ++ LG +IDY KLL + + ++RA++YT V E+Q Sbjct: 56 NRGRVAIFIDGLNLFHTALQLGIEIDYVKLLCHLTNGSRLLRAFFYTGVDNSNEKQ---- 111 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L W+ NG++VVAK + EN KS+++VE+AVD + + V+ SGDG Sbjct: 112 QGFLLWMRRNGYRVVAKDIMQPAEN----FKKSNLNVEIAVDMITLAPYYDTAVLVSGDG 167 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178 V A+ R +V +VS + S+ L AD F+DL +K I +D + Sbjct: 168 DLAYAVNAVSRMGVRVEVVSL----QTTTSESLIDVADCFIDLDSIKAHIQKDSN 218 >gi|94985935|ref|YP_605299.1| hypothetical protein Dgeo_1835 [Deinococcus geothermalis DSM 11300] gi|94556216|gb|ABF46130.1| protein of unknown function DUF88 [Deinococcus geothermalis DSM 11300] Length = 194 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 63/181 (34%), Positives = 100/181 (55%), Gaps = 11/181 (6%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 E+IALFIDGAN+YA++K LG++ D+RK+L+ FRS + A+YYT V P Sbjct: 2 TERIALFIDGANVYAAAKRLGWNFDHRKMLEFFRSYGSLHNAFYYTAV---PLPMDDKQK 58 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 +D L Y G+ V + +E T+ G ++S+D+E+ D S+ + V+ +GDG Sbjct: 59 RFIDALTYMGYTVRTRPLRESTDEHGDTHRRASLDIEIVTDLLTTSDRFDTAVLLTGDGD 118 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA----RDPDED 180 F V L+ + K+V + S P M S +LR AD ++DL ++ ++ R P E Sbjct: 119 FERPVEVLRARGKRVVVASI----PEMTSYELRNAADEYVDLGAIREQVERLGYRLPSEQ 174 Query: 181 K 181 + Sbjct: 175 R 175 >gi|17227728|ref|NP_484276.1| hypothetical protein all0232 [Nostoc sp. PCC 7120] gi|75908934|ref|YP_323230.1| hypothetical protein Ava_2722 [Anabaena variabilis ATCC 29413] gi|17135210|dbj|BAB77756.1| all0232 [Nostoc sp. PCC 7120] gi|75702659|gb|ABA22335.1| Protein of unknown function DUF88 [Anabaena variabilis ATCC 29413] Length = 209 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 57/179 (31%), Positives = 98/179 (54%), Gaps = 12/179 (6%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 + + R ++A+FIDG+NL+ ++ LG +IDY KLL + ++RA++YT V E+Q Sbjct: 16 VLENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTGGSRLLRAFFYTGVDRTNEKQ- 74 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 L W+ NG++V+AK + + K+++DVE+AVD + + V+ S Sbjct: 75 ---QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDMMALVDSYDTAVLVS 127 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG V ++ + +V +VS SM SD L +D ++DL +K +I + P + Sbjct: 128 GDGDLAYAVNSVSYRGVRVEVVSL----RSMTSDSLINVSDRYIDLEAIKEDIQKTPRQ 182 >gi|218248715|ref|YP_002374086.1| hypothetical protein PCC8801_3991 [Cyanothece sp. PCC 8801] gi|257061778|ref|YP_003139666.1| hypothetical protein Cyan8802_4033 [Cyanothece sp. PCC 8802] gi|218169193|gb|ACK67930.1| protein of unknown function DUF88 [Cyanothece sp. PCC 8801] gi|256591944|gb|ACV02831.1| protein of unknown function DUF88 [Cyanothece sp. PCC 8802] Length = 226 Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats. Identities = 58/180 (32%), Positives = 96/180 (53%), Gaps = 12/180 (6%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 + + R ++A+FIDG+NL+ ++ LG +IDY KLL + ++RA++YT V E+Q Sbjct: 41 VLENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTGGSRLLRAFFYTGVDRTNEKQ- 99 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 L W+ NG++V+AK + + K+++DVE+AVD + VI S Sbjct: 100 ---QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDLMALVGSYDTAVIVS 152 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG A+ + ++ +VS SM SD L AD ++DL +K +I + P + Sbjct: 153 GDGDLAYAADAVSYRGSRIEVVSL----RSMTSDSLINVADRYIDLDQIKEDIQKSPKPN 208 >gi|226356860|ref|YP_002786600.1| hypothetical protein Deide_18580 [Deinococcus deserti VCD115] gi|226318850|gb|ACO46846.1| Conserved hypothetical protein [Deinococcus deserti VCD115] Length = 197 Score = 204 bits (519), Expect = 6e-51, Method: Composition-based stats. Identities = 58/181 (32%), Positives = 96/181 (53%), Gaps = 11/181 (6%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 E+IALFIDGAN+YA++K LG++ D+RK+L+ F ++ + A+YYT V P Sbjct: 1 MERIALFIDGANVYAAAKRLGWNFDHRKILEHFAAQGRLYNAFYYTAV---PMPIDDKQK 57 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 D L Y G+ V + +E T+ G ++++DVE+ D ++ + V+ +GDG Sbjct: 58 RFTDALTYMGYTVRTRPLRESTDEHGDTSRRANLDVEIVTDLLTTADRYDTAVLLTGDGD 117 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD----PDED 180 F V L+ + K+V + S M S +LR AD ++D ++ + R P E Sbjct: 118 FERPVEVLRARGKRVVVASIA----EMTSYELRNAADEYVDFKDIRVHVERPGYRLPSEQ 173 Query: 181 K 181 + Sbjct: 174 R 174 >gi|119512208|ref|ZP_01631298.1| hypothetical protein N9414_13695 [Nodularia spumigena CCY9414] gi|119463174|gb|EAW44121.1| hypothetical protein N9414_13695 [Nodularia spumigena CCY9414] Length = 209 Score = 203 bits (518), Expect = 8e-51, Method: Composition-based stats. Identities = 56/179 (31%), Positives = 99/179 (55%), Gaps = 12/179 (6%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 + + R ++A+FIDG+NL+ ++ LG +IDY KLL + ++R+++YT V E+Q Sbjct: 16 VLENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTGGSRLLRSFFYTGVDRTNEKQ- 74 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 L W+ NG++V+AK + + K+++DVE+AVD + + V+ S Sbjct: 75 ---QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDMMALVDSYDTAVLVS 127 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG V ++ + +V +VS SM SD L +D ++DL +K +I ++P + Sbjct: 128 GDGDLAYAVNSVSYRGVRVEVVSL----RSMTSDSLINVSDRYIDLEAIKEDIQKNPRQ 182 >gi|113475474|ref|YP_721535.1| hypothetical protein Tery_1805 [Trichodesmium erythraeum IMS101] gi|110166522|gb|ABG51062.1| protein of unknown function DUF88 [Trichodesmium erythraeum IMS101] Length = 204 Score = 203 bits (517), Expect = 8e-51, Method: Composition-based stats. Identities = 53/180 (29%), Positives = 95/180 (52%), Gaps = 12/180 (6%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 + + R ++A+FIDG+NL+ ++ LG +IDY KLL + ++R+++YT V E+Q Sbjct: 20 ILENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTGGSRLLRSFFYTGVDRTNEKQ- 78 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 L W+ NG++V++K + + K+++DVE+AVD + ++ S Sbjct: 79 ---QGFLLWMRRNGYRVISKDLVQLPDGS----KKANLDVEIAVDMMALVGSYDTAILVS 131 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG V A+ + +V +VS +M SD L +D ++DL +K +I + Sbjct: 132 GDGDLAYAVDAVSYRGVRVEVVSL----RAMTSDSLINVSDRYIDLEQIKEDIQKTSKSP 187 >gi|15807658|ref|NP_295720.1| hypothetical protein DR_1997m [Deinococcus radiodurans R1] gi|970086|dbj|BAA09936.1| ORF1 [Deinococcus radiodurans] Length = 200 Score = 203 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 62/172 (36%), Positives = 94/172 (54%), Gaps = 7/172 (4%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 E+IALFIDGAN+YA++K LG++ D+RK+L+ F + A+YYT V P Sbjct: 1 MERIALFIDGANVYAAAKRLGWNFDHRKILEHFAGLGALYNAFYYTAV---PWPVDDKQK 57 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 +D L Y G+ V + +E T+ G ++S+D+EL D + V+ SGDG Sbjct: 58 RFVDALTYMGYTVRTRPLRENTDENGDTSRRASLDIELVTDLLTTESRYDVAVLLSGDGD 117 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 F V L+ + KKV + S P M S +LR AD ++DLA ++ ++ R Sbjct: 118 FERPVEVLRARGKKVIVASI----PEMTSAELRNAADEYVDLASIREQVERP 165 >gi|157273336|gb|ABV27235.1| RtsE [Candidatus Chloracidobacterium thermophilum] Length = 332 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 12/177 (6%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 R ++A+FIDG NL+ ++++ G +IDY KLL R ++RA++YT V +QQ Sbjct: 20 SNRGRVAIFIDGNNLFHAARSAGVEIDYAKLLAYLRGDDPLLRAFFYTGV----DQQAER 75 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122 L W+ NG++VV K K F + K+++DVE+AVD ++ + ++ SGD Sbjct: 76 QQGFLLWMRRNGYRVVQKELKTFPDG----TKKANLDVEIAVDMLSLADKYDTAILVSGD 131 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 FT + + K +V + + S +L AD F +L + EI++ P + Sbjct: 132 EDFTYALNVIAYKGVRVEVAGF----RANTSPRLIDVADRFHELDSVLAEISKSPSK 184 >gi|6136304|gb|AAF04325.1| unknown [Bradyrhizobium japonicum] Length = 149 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 78/139 (56%), Positives = 108/139 (77%), Gaps = 2/139 (1%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 P KIALFIDGANLYA++K LGFDIDY++LLK F+SR ++RA+YYT ++ D Q++S Sbjct: 4 SPTNKIALFIDGANLYATAKTLGFDIDYKRLLKEFQSRGTLLRAFYYTAIIED--QEYSS 61 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122 + PL+DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++ +V+FSGD Sbjct: 62 IRPLIDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHIDQMVLFSGD 121 Query: 123 GCFTTLVAALQRKVKKVTI 141 G F +LV A+QR+ +VT+ Sbjct: 122 GDFRSLVEAVQRRGVRVTV 140 >gi|158335465|ref|YP_001516637.1| hypothetical protein AM1_2313 [Acaryochloris marina MBIC11017] gi|158305706|gb|ABW27323.1| conserved hypothetical protein [Acaryochloris marina MBIC11017] Length = 210 Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats. Identities = 56/178 (31%), Positives = 94/178 (52%), Gaps = 12/178 (6%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 + + R +IA+FIDG+NL+ ++ LG +IDY KLL + ++R+++YT V E+Q Sbjct: 18 VLENRGRIAIFIDGSNLFYAALQLGIEIDYTKLLCRLTCGSRLLRSFFYTGVDPTNEKQ- 76 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 L W+ NG++V+ K + + K+++DVE+AVD + ++ S Sbjct: 77 ---QGFLLWMRRNGYRVITKELVQLPDGS----KKANLDVEIAVDMMSLVGCYDTAILVS 129 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178 GDG V A+ + +V +VS SM SD L AD ++DL +K +I + Sbjct: 130 GDGDLAYAVDAVSYRGIRVEVVSL----RSMTSDSLINVADRYIDLEGIKGDIQKASR 183 >gi|300867847|ref|ZP_07112489.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506] gi|300334178|emb|CBN57665.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506] Length = 201 Score = 201 bits (511), Expect = 5e-50, Method: Composition-based stats. Identities = 56/180 (31%), Positives = 97/180 (53%), Gaps = 12/180 (6%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 + + R ++A+FIDG+NL+ ++ LG +IDY KLL + + ++R+++YT V E+Q Sbjct: 16 VLENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTAGSRLLRSFFYTGVDRTNEKQ- 74 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 L W+ NG++V++K + + K+++DVE+AVD + V+ S Sbjct: 75 ---QGFLLWMRRNGYRVISKDLVQLPDGS----KKANLDVEIAVDMMALVGSYDTAVLVS 127 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG V A+ + +V +VS SM SD L AD ++DL +K +I + + Sbjct: 128 GDGDLAYAVDAVSYRGVRVEVVSL----RSMTSDSLINVADRYIDLESIKEDIQKTNRPN 183 >gi|254424426|ref|ZP_05038144.1| conserved hypothetical protein [Synechococcus sp. PCC 7335] gi|196191915|gb|EDX86879.1| conserved hypothetical protein [Synechococcus sp. PCC 7335] Length = 211 Score = 200 bits (509), Expect = 9e-50, Method: Composition-based stats. Identities = 57/180 (31%), Positives = 95/180 (52%), Gaps = 12/180 (6%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 + + R ++A+FIDG+NL+ ++ LG +IDY KLL S + + R+++YT V E+Q Sbjct: 19 VLENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLSRLTSGSRLFRSFFYTGVDRSNEKQ- 77 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 L W+ NG++V+AK + + K+++DVE+AVD + V+ S Sbjct: 78 ---QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDMMALVGCYDTAVLVS 130 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG V A K +V +VS +M SD L +D ++DL +K +I + + Sbjct: 131 GDGDLAYAVDAASYKGVRVEVVSL----RAMTSDSLINVSDRYIDLDSIKEDICKTSRAN 186 >gi|16331574|ref|NP_442302.1| hypothetical protein slr0650 [Synechocystis sp. PCC 6803] gi|1001641|dbj|BAA10372.1| slr0650 [Synechocystis sp. PCC 6803] Length = 201 Score = 199 bits (508), Expect = 1e-49, Method: Composition-based stats. Identities = 57/180 (31%), Positives = 96/180 (53%), Gaps = 12/180 (6%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 + + R ++A+FIDG+NL+ ++ LG +IDY KLL + ++RA++YT V E+Q Sbjct: 16 LLENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLHCLTGGSRLLRAFFYTGVDRSNEKQ- 74 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 L W+ NG++V+AK + + K+++DVE+AVD + V+ S Sbjct: 75 ---QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDLMSLVGSYDTAVVVS 127 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG A+ + ++ +VS SM SD L +D ++DL +K EI + P + Sbjct: 128 GDGDLAYAADAVSYRGARIEVVSL----RSMTSDSLINVSDRYVDLDSIKEEIQKQPRPN 183 >gi|320335491|ref|YP_004172202.1| hypothetical protein Deima_2908 [Deinococcus maricopensis DSM 21211] gi|319756780|gb|ADV68537.1| Domain of unknown function DUF88 [Deinococcus maricopensis DSM 21211] Length = 192 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 58/181 (32%), Positives = 96/181 (53%), Gaps = 11/181 (6%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 E+I LFIDGAN+YA++K LG++ D+RK+L+ F + A+YYT V P Sbjct: 1 MERIGLFIDGANVYAAAKRLGWNFDHRKILEHFAGYGRLYNAFYYTAV---PTPVDDKQK 57 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 +D L Y G+ V K+ +E T+ G ++++D+ L D ++ + ++ +GDG Sbjct: 58 RFIDALTYMGYTVRTKMLRENTDEHGDTHRRANLDILLVTDLLATADLYDTAILLTGDGD 117 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD----PDED 180 F V L+ K K+V + S P M S +LR AD ++D ++ ++ R P E Sbjct: 118 FERPVEVLRAKGKRVIVASI----PEMTSYELRNAADAYVDFKDIRGDVERPGYRLPSEG 173 Query: 181 K 181 + Sbjct: 174 R 174 >gi|284929296|ref|YP_003421818.1| hypothetical protein UCYN_07430 [cyanobacterium UCYN-A] gi|284809740|gb|ADB95437.1| uncharacterized conserved protein [cyanobacterium UCYN-A] Length = 227 Score = 198 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 56/180 (31%), Positives = 96/180 (53%), Gaps = 12/180 (6%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M + R ++A+FIDG+NL+ ++ LG +IDY +LL + ++RA++YT V E+Q Sbjct: 42 MLENRGRVAIFIDGSNLFYAALQLGIEIDYTRLLYRLTEGSRLLRAFFYTGVDRTNEKQ- 100 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 L W+ NG++V+AK + + K+++DVE+AVD + +I S Sbjct: 101 ---QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDLMALVGSYDTAIIVS 153 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG ++ + +V +VS SM SD L AD+++DL +K +I + + Sbjct: 154 GDGDLAYAANSVSYRGARVEVVSL----RSMTSDSLINVADHYIDLDQIKEDIQKTSRTN 209 >gi|170079300|ref|YP_001735938.1| hypothetical protein SYNPCC7002_A2707 [Synechococcus sp. PCC 7002] gi|169886969|gb|ACB00683.1| conserved hypothetical protein [Synechococcus sp. PCC 7002] Length = 204 Score = 197 bits (501), Expect = 6e-49, Method: Composition-based stats. Identities = 56/175 (32%), Positives = 95/175 (54%), Gaps = 12/175 (6%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 + + R ++A+FIDG+NL+ ++ LG +IDY KLL + ++R+++YT V E+Q Sbjct: 16 VLENRGRVAIFIDGSNLFYAALQLGIEIDYSKLLYRLTGGSRLLRSFFYTGVDRANEKQ- 74 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 L W+ NG++V+AK + + K+++DVE+AVD + V+ S Sbjct: 75 ---QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDMMALVGSYDTAVLVS 127 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 GDG V A+ + +V +VS SM SD L AD ++DL ++ +I + Sbjct: 128 GDGDLAYAVDAVSYRGARVEVVSL----RSMTSDSLINVADRYIDLEQIQTDIQK 178 >gi|307151237|ref|YP_003886621.1| hypothetical protein Cyan7822_1345 [Cyanothece sp. PCC 7822] gi|306981465|gb|ADN13346.1| protein of unknown function DUF88 [Cyanothece sp. PCC 7822] Length = 222 Score = 196 bits (500), Expect = 8e-49, Method: Composition-based stats. Identities = 58/176 (32%), Positives = 95/176 (53%), Gaps = 12/176 (6%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 + + R ++A+FIDG+NL+ ++ LG +IDY KLL + + ++RA++YT V E+Q Sbjct: 37 ILENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLFRLTNGSKLLRAFFYTGVDRSNEKQ- 95 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 L W+ NG++V+AK + + K+++DVE+AVD + VI S Sbjct: 96 ---QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDLMSLVGSYDTAVIVS 148 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 GDG A+ + +V +VS SM SD L AD ++DL +K +I + Sbjct: 149 GDGDLAYAANAVSYRGARVEVVSL----RSMTSDSLINVADRYVDLDQIKEDIQKH 200 >gi|218437105|ref|YP_002375434.1| hypothetical protein PCC7424_0096 [Cyanothece sp. PCC 7424] gi|218169833|gb|ACK68566.1| protein of unknown function DUF88 [Cyanothece sp. PCC 7424] Length = 201 Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats. Identities = 58/178 (32%), Positives = 95/178 (53%), Gaps = 12/178 (6%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 + + R ++A+FIDG+NL+ ++ LG +IDY KLL + + ++RA++YT V E+Q Sbjct: 16 ILENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLYRLTNGSKLLRAFFYTGVDRSNEKQ- 74 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 L W+ NG++V+AK + + K+++DVE+AVD + VI S Sbjct: 75 ---QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDLMSLVGSYDTAVIVS 127 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178 GDG A+ + +V +VS SM SD L AD ++DL +K +I + Sbjct: 128 GDGDLAYAANAVSYQGARVEVVSL----RSMTSDSLINVADRYVDLDQIKEDIQKHQK 181 >gi|17232221|ref|NP_488769.1| hypothetical protein all4729 [Nostoc sp. PCC 7120] gi|75908164|ref|YP_322460.1| hypothetical protein Ava_1943 [Anabaena variabilis ATCC 29413] gi|17133866|dbj|BAB76428.1| all4729 [Nostoc sp. PCC 7120] gi|75701889|gb|ABA21565.1| Protein of unknown function DUF88 [Anabaena variabilis ATCC 29413] Length = 236 Score = 195 bits (496), Expect = 3e-48, Method: Composition-based stats. Identities = 59/178 (33%), Positives = 94/178 (52%), Gaps = 14/178 (7%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVV-----GDPEQ 58 R ++A+FIDGANL+ ++ LG +IDY KLL + + ++RA++YT V ++ Sbjct: 53 NRGRVAIFIDGANLFQAALQLGIEIDYLKLLCRLTAGSRLLRAFFYTGVDMSRPTPTRQR 112 Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVI 118 L W+ NG++VV K + T+N K +++VE+AVD + + V+ Sbjct: 113 TNDKQQGFLFWMRRNGYRVVTKEL-QVTDNN----KKPNLNVEIAVDMITLAPHYDTAVL 167 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 SGDG V A+ +V +VS +M +D L ADYF+DL +K I +D Sbjct: 168 VSGDGDLAYAVNAVSSTGVRVEVVSL----RTMTNDCLIDVADYFIDLDSIKQYIQKD 221 >gi|172036862|ref|YP_001803363.1| hypothetical protein cce_1947 [Cyanothece sp. ATCC 51142] gi|171698316|gb|ACB51297.1| unknown [Cyanothece sp. ATCC 51142] Length = 225 Score = 194 bits (494), Expect = 5e-48, Method: Composition-based stats. Identities = 55/180 (30%), Positives = 95/180 (52%), Gaps = 12/180 (6%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 + + R ++A+FIDG+NL+ ++ LG +IDY KLL + ++RA++YT V E+Q Sbjct: 41 VLENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLYRLTEGSRLLRAFFYTGVDRTNEKQ- 99 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 L W+ NG++V+AK + + K+++DVE+AVD + +I S Sbjct: 100 ---QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDLMALVGSYDTAIIVS 152 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG ++ + ++ +VS SM SD L AD ++DL +K +I + + Sbjct: 153 GDGDLAYAADSVSYRGARIEVVSL----RSMTSDSLINVADRYIDLDQIKEDIQKTRKPN 208 >gi|126656216|ref|ZP_01727600.1| hypothetical protein CY0110_03999 [Cyanothece sp. CCY0110] gi|126622496|gb|EAZ93202.1| hypothetical protein CY0110_03999 [Cyanothece sp. CCY0110] Length = 225 Score = 194 bits (494), Expect = 5e-48, Method: Composition-based stats. Identities = 55/180 (30%), Positives = 95/180 (52%), Gaps = 12/180 (6%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 + + R ++A+FIDG+NL+ ++ LG +IDY KLL + ++RA++YT V E+Q Sbjct: 41 VLENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLYRLTEGSRLLRAFFYTGVDRTNEKQ- 99 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 L W+ NG++V+AK + + K+++DVE+AVD + +I S Sbjct: 100 ---QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDLMALVGSYDTAIIVS 152 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG ++ + ++ +VS SM SD L AD ++DL +K +I + + Sbjct: 153 GDGDLAYAADSVSYRGARIEVVSL----RSMTSDSLINVADRYIDLDQIKEDIQKTRKPN 208 >gi|166367025|ref|YP_001659298.1| hypothetical protein MAE_42840 [Microcystis aeruginosa NIES-843] gi|166089398|dbj|BAG04106.1| hypothetical protein MAE_42840 [Microcystis aeruginosa NIES-843] Length = 201 Score = 193 bits (492), Expect = 6e-48, Method: Composition-based stats. Identities = 58/178 (32%), Positives = 95/178 (53%), Gaps = 12/178 (6%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 + + R ++A+FIDG+NL+ ++ LG +IDY KLL + + ++RA++YT V E+Q Sbjct: 16 VLENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTAGSRLLRAFFYTGVDRTNEKQ- 74 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 L W+ NG++V+AK + + K+++DVE+AVD + VI S Sbjct: 75 ---QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDLMALVGSYDTAVIVS 127 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178 GDG ++ + +V +VS SM SD L AD ++DL +K EI + Sbjct: 128 GDGDLAYAADSVSYRGARVEVVSL----RSMTSDSLINVADRYVDLDQIKEEIQKTSK 181 >gi|159029235|emb|CAO87595.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 201 Score = 193 bits (492), Expect = 6e-48, Method: Composition-based stats. Identities = 58/178 (32%), Positives = 95/178 (53%), Gaps = 12/178 (6%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 + + R ++A+FIDG+NL+ ++ LG +IDY KLL + + ++RA++YT V E+Q Sbjct: 16 VLENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTAGSRLLRAFFYTGVDRTNEKQ- 74 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 L W+ NG++V+AK + + K+++DVE+AVD + VI S Sbjct: 75 ---QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDLMALVGSYDTAVIVS 127 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178 GDG ++ + +V +VS SM SD L AD ++DL +K EI + Sbjct: 128 GDGDLAYAADSVSYRGARVEVVSL----RSMTSDSLINVADRYVDLDQIKEEIQKTSK 181 >gi|218440568|ref|YP_002378897.1| hypothetical protein PCC7424_3645 [Cyanothece sp. PCC 7424] gi|218173296|gb|ACK72029.1| protein of unknown function DUF88 [Cyanothece sp. PCC 7424] Length = 180 Score = 193 bits (492), Expect = 8e-48, Method: Composition-based stats. Identities = 50/178 (28%), Positives = 97/178 (54%), Gaps = 12/178 (6%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRA--IVIRAYYYTTVVGDPEQQ 59 P++++++F+DG N++ + + G+ D R++L+ F + +I A++YT + +Q Sbjct: 10 LYPKDRLSIFVDGNNMFYAQQKNGWFFDPRRVLEYFTNDPTVNLINAFWYTGLKDSQDQ- 68 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENC-GRKRVKSSMDVELAVDAFEQSEGLEHLVI 118 D L G+ V K+ KE+ ++ GR K+++D+E+ VD F + + +++ Sbjct: 69 ----RGFRDALISLGYTVRTKILKEYYDDSSGRYSQKANLDIEIVVDMFNTVDQYDRVIL 124 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 FSGDG F + L+ K +T+VST M + +LR D ++DL ++N I + Sbjct: 125 FSGDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIRNFIEKT 178 >gi|37521016|ref|NP_924393.1| hypothetical protein glr1447 [Gloeobacter violaceus PCC 7421] gi|35212012|dbj|BAC89388.1| glr1447 [Gloeobacter violaceus PCC 7421] Length = 190 Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 54/175 (30%), Positives = 92/175 (52%), Gaps = 10/175 (5%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 ++++++FIDG N++ + ++ G+ D RK+L+ F ++ A++YT + +Q Sbjct: 5 YRQDRVSIFIDGNNMFYAQRSNGWFFDPRKVLEYFNRHEALVNAFWYTGIRDPQDQ---- 60 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTEN-CGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 D L GF V K KE+ + G K+++D+E+ VD F H V+FSG Sbjct: 61 -RGFRDALIAMGFTVREKFLKEYYDRLSGEMTQKANLDIEIVVDMFNTVAQYNHAVLFSG 119 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 DG F V L+ K ++T+VST M + +LR AD ++DL L+ I + Sbjct: 120 DGDFERAVELLRSKDTRITVVST----EGMIARELRNAADRYIDLNDLRPFIEKT 170 >gi|86605182|ref|YP_473945.1| hypothetical protein CYA_0464 [Synechococcus sp. JA-3-3Ab] gi|86553724|gb|ABC98682.1| conserved hypothetical protein [Synechococcus sp. JA-3-3Ab] Length = 198 Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 59/176 (33%), Positives = 98/176 (55%), Gaps = 12/176 (6%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 D R ++A+FIDG+NL+ ++ +G +IDY +LLK R+ ++R+++YT V + E+Q Sbjct: 18 DDRGRVAIFIDGSNLFYAALQMGIEIDYTRLLKTLTGRSPLLRSFFYTGVDRNNEKQ--- 74 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122 L W+ NG++VV K + + ++++DVE+AVD E V+ SGD Sbjct: 75 -QGFLLWMRRNGYRVVTKELTQLPDGS----KRANLDVEIAVDMLSLVRWYETAVLVSGD 129 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178 G V A+ + +V +VS SM SDQL AD ++DL +K++I + Sbjct: 130 GDLAYAVNAVSYQGARVEVVSL----RSMTSDQLINLADRYIDLESIKDQIKKTNR 181 >gi|75908331|ref|YP_322627.1| hypothetical protein Ava_2110 [Anabaena variabilis ATCC 29413] gi|75702056|gb|ABA21732.1| Protein of unknown function DUF88 [Anabaena variabilis ATCC 29413] Length = 173 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 52/179 (29%), Positives = 97/179 (54%), Gaps = 13/179 (7%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAF---RSRAIVIRAYYYTTVVGDPE 57 M P ++++F+DG N++ + + G+ D R++L+ F +S +I A++YT + + Sbjct: 1 MGSPMNRLSIFVDGNNMFYAQQKNGWFFDPRRVLEYFKNEQSETTLINAFWYTGLKDPQD 60 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENC-GRKRVKSSMDVELAVDAFEQSEGLEHL 116 Q D L G+ V K+ KE+ ++ GR K+++D+E+ VD F + + + Sbjct: 61 Q-----RGFRDALISLGYTVRTKILKEYYDDSSGRYSQKANLDIEIVVDMFNTVDQYDRV 115 Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 V+FSGDG F + L+ K +T+VST M + +LR D ++DL +++ I + Sbjct: 116 VLFSGDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIRDRIEK 170 >gi|218246675|ref|YP_002372046.1| hypothetical protein PCC8801_1847 [Cyanothece sp. PCC 8801] gi|257059717|ref|YP_003137605.1| hypothetical protein Cyan8802_1873 [Cyanothece sp. PCC 8802] gi|218167153|gb|ACK65890.1| protein of unknown function DUF88 [Cyanothece sp. PCC 8801] gi|256589883|gb|ACV00770.1| protein of unknown function DUF88 [Cyanothece sp. PCC 8802] Length = 178 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 48/175 (27%), Positives = 95/175 (54%), Gaps = 12/175 (6%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAI--VIRAYYYTTVVGDPEQQFS 61 P+E++++F+DG N++ + + + D R++L+ F + ++ A++YT + +Q Sbjct: 10 PKERLSIFVDGNNMFYAQQKNSWFFDPRRVLEYFTNDPTITLVNAFWYTGLKDSQDQ--- 66 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTEN-CGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 D L G+ V K+ KE+ ++ GR K+++D+E+ VD F + + +++FS Sbjct: 67 --RGFRDALISLGYTVRTKILKEYYDDTSGRYSQKANLDIEIVVDMFNTVDQYDRVILFS 124 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 GDG F + L+ K +T+VST M + +LR D ++DL ++ I + Sbjct: 125 GDGDFERAIELLRSKSTHITVVST----EGMIARELRNATDRYIDLNDIRPHIEK 175 >gi|307153372|ref|YP_003888756.1| hypothetical protein Cyan7822_3539 [Cyanothece sp. PCC 7822] gi|306983600|gb|ADN15481.1| protein of unknown function DUF88 [Cyanothece sp. PCC 7822] Length = 180 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 49/177 (27%), Positives = 95/177 (53%), Gaps = 12/177 (6%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAI--VIRAYYYTTVVGDPEQQF 60 P++++++F+DG N++ + + G+ D R++L F + +I A++YT + +Q Sbjct: 11 YPKDRLSIFVDGNNMFYAQQKNGWFFDPRRVLDHFTNDPTVTLINAFWYTGLKDSQDQ-- 68 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENC-GRKRVKSSMDVELAVDAFEQSEGLEHLVIF 119 D L G+ V K+ KE+ ++ GR K+++D+E+ VD F + + +++F Sbjct: 69 ---RGFRDALISLGYTVRTKILKEYYDDSSGRYSQKANLDIEIVVDMFNTVDQYDRVILF 125 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 SGDG F + L+ K +T+VST M + +LR D ++DL ++ I + Sbjct: 126 SGDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIRTFIEKT 178 >gi|218514126|ref|ZP_03510966.1| hypothetical protein Retl8_10672 [Rhizobium etli 8C-3] Length = 149 Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 80/135 (59%), Positives = 108/135 (80%), Gaps = 2/135 (1%) Query: 45 RAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAV 104 RAYYYT ++ D Q++S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+ELA+ Sbjct: 1 RAYYYTALIED--QEYSSIRPLIDWLDYNGYKVVTKPAKEFTDSMGRRKIKGNMDIELAI 58 Query: 105 DAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 DA EQSE ++HLVIFSGDG FT LV ALQR+ +KV+++ST+ + P M +D LRRQAD+F+ Sbjct: 59 DAMEQSETVDHLVIFSGDGDFTNLVEALQRRGRKVSVISTMATQPPMIADDLRRQADHFI 118 Query: 165 DLAYLKNEIARDPDE 179 DL LK EI RDP E Sbjct: 119 DLLSLKAEIGRDPSE 133 >gi|86607727|ref|YP_476489.1| hypothetical protein CYB_0228 [Synechococcus sp. JA-2-3B'a(2-13)] gi|86556269|gb|ABD01226.1| conserved hypothetical protein [Synechococcus sp. JA-2-3B'a(2-13)] Length = 200 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 60/176 (34%), Positives = 98/176 (55%), Gaps = 12/176 (6%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 D R ++A+FIDG+NL+ ++ LG +IDY +LLK R+ ++R+++YT V + E+Q Sbjct: 18 DNRGRVAIFIDGSNLFYAALQLGIEIDYTRLLKTLSGRSPLLRSFFYTGVDRNNEKQ--- 74 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122 L W+ NG++VV K + + ++++DVE+AVD E V+ SGD Sbjct: 75 -QGFLLWMRRNGYRVVTKELTQLPDGS----KRANLDVEIAVDMLSLVRWYETAVLVSGD 129 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178 G V A+ + +V +VS SM SDQL AD ++DL +K++I + Sbjct: 130 GDLAYAVNAVSYQGARVEVVSL----RSMTSDQLINLADRYIDLESIKDQIKKTNR 181 >gi|119509873|ref|ZP_01629016.1| hypothetical protein N9414_11729 [Nodularia spumigena CCY9414] gi|119465482|gb|EAW46376.1| hypothetical protein N9414_11729 [Nodularia spumigena CCY9414] Length = 236 Score = 191 bits (487), Expect = 3e-47, Method: Composition-based stats. Identities = 52/180 (28%), Positives = 87/180 (48%), Gaps = 14/180 (7%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 + R ++A+FIDG +L+ ++ LG +IDY KLL + ++RA++YT + Sbjct: 51 LENRGRVAIFIDGVSLFHTALQLGIEIDYLKLLCHLTGGSRLLRAFFYTAIDTSRPNAAR 110 Query: 62 P-----LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHL 116 P L W+ NG++VV K + K +++VE+AVD + + Sbjct: 111 PRPNEKQQGFLFWMRRNGYRVVTKEVQ-----LADHTKKHNLNVEIAVDMITLAPYYDTA 165 Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 ++ SGD V A+ +V +VS ++ SD L AD F+DL +K I +D Sbjct: 166 ILVSGDRDLAYAVNAVSATGSRVEVVSL----RALTSDSLIDVADEFIDLDRIKQYIQKD 221 >gi|254510985|ref|ZP_05123052.1| hypothetical protein RKLH11_1520 [Rhodobacteraceae bacterium KLH11] gi|221534696|gb|EEE37684.1| hypothetical protein RKLH11_1520 [Rhodobacteraceae bacterium KLH11] Length = 183 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 74/178 (41%), Positives = 113/178 (63%), Gaps = 2/178 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E A+F+DG NL+ S+KALGFD+DY +L + ++RA Y+T ++ E + Sbjct: 3 MFHQNETTAIFVDGYNLHHSAKALGFDVDYERLKSMVEKQCHLLRATYFTMLIERDE--Y 60 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 PL+D+L YNG+ V AK A+EF GR R K ++V+LA+ A + + H V+F+ Sbjct: 61 IATRPLVDFLQYNGWTVTAKDAREFVHGDGRSRFKGRIEVDLALAAARITPHINHAVLFT 120 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178 G F LV LQ + +V++VST+ ++P +ASDQLRR+AD F++LA +++ IAR Sbjct: 121 GSQDFCPLVEYLQDQGVRVSVVSTIKTEPILASDQLRRKADKFIELADIRDVIARPDR 178 >gi|298491324|ref|YP_003721501.1| hypothetical protein Aazo_2466 ['Nostoc azollae' 0708] gi|298233242|gb|ADI64378.1| protein of unknown function DUF88 ['Nostoc azollae' 0708] Length = 228 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 56/173 (32%), Positives = 88/173 (50%), Gaps = 12/173 (6%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 R ++A+FIDG NL+ ++ LG +IDY KLL + ++RA++YT V E+Q Sbjct: 53 NRGRVAIFIDGLNLFHAALQLGIEIDYVKLLCRLTQSSRLLRAFFYTGVDASKEKQ---- 108 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L W+ NG++VV K EN K +++VE+A+D + + V+ SGDG Sbjct: 109 QGFLLWMRRNGYRVVTKDILAVAENG----KKPNLNVEIAIDMITLAPYYDTAVLVSGDG 164 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 V A+ +V ++ + SD L ADYF+D +K I +D Sbjct: 165 DLAYAVNAVSSLGSRVEVI----GLQTTTSDTLINVADYFIDFDSVKQHIQKD 213 >gi|166368642|ref|YP_001660915.1| hypothetical protein MAE_59010 [Microcystis aeruginosa NIES-843] gi|159030407|emb|CAO91305.1| unnamed protein product [Microcystis aeruginosa PCC 7806] gi|166091015|dbj|BAG05723.1| hypothetical protein MAE_59010 [Microcystis aeruginosa NIES-843] Length = 183 Score = 191 bits (486), Expect = 4e-47, Method: Composition-based stats. Identities = 50/176 (28%), Positives = 96/176 (54%), Gaps = 12/176 (6%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAI--VIRAYYYTTVVGDPEQQFS 61 P++++++F+DG N++ + + G+ D RK+L F + +I A++YT + +Q Sbjct: 15 PKDRLSIFVDGNNMFYAQQKNGWFFDPRKVLNYFTNDPNIMLINAFWYTGLKDSQDQ--- 71 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENC-GRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 D L G+ V K+ KE+ ++ GR K+++D+E+ VD F + + +++FS Sbjct: 72 --RGFRDALISLGYTVRTKILKEYYDDSSGRFSQKANLDIEIVVDMFNTVDQYDRVILFS 129 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 GDG F + L+ K +T+VST M + +LR D ++DL ++ +I + Sbjct: 130 GDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIRKDIEKS 181 >gi|282896757|ref|ZP_06304763.1| Protein of unknown function DUF88 [Raphidiopsis brookii D9] gi|281198166|gb|EFA73056.1| Protein of unknown function DUF88 [Raphidiopsis brookii D9] Length = 173 Score = 191 bits (485), Expect = 5e-47, Method: Composition-based stats. Identities = 52/180 (28%), Positives = 98/180 (54%), Gaps = 13/180 (7%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRA---IVIRAYYYTTVVGDPE 57 M P ++++F+DG N++ + + G+ D R++L+ F++ +I A++YT + + Sbjct: 1 MVLPMSRLSIFVDGNNMFYAQQKNGWFFDPRRVLEYFKNEQPETTLINAFWYTGLKDPQD 60 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTEN-CGRKRVKSSMDVELAVDAFEQSEGLEHL 116 Q D L G+ V K+ KE+ ++ GR K+++D+E+ VD F + + + Sbjct: 61 Q-----RGFRDALISLGYTVRTKILKEYYDDVSGRYSQKANLDIEIVVDMFNTVDQYDRV 115 Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 V+FSGDG F + L+ K +T+VST M + +LR D ++DL +K++I + Sbjct: 116 VLFSGDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIKDQIEKT 171 >gi|282901769|ref|ZP_06309684.1| protein of unknown function DUF88 [Cylindrospermopsis raciborskii CS-505] gi|281193386|gb|EFA68368.1| protein of unknown function DUF88 [Cylindrospermopsis raciborskii CS-505] Length = 173 Score = 190 bits (484), Expect = 6e-47, Method: Composition-based stats. Identities = 51/180 (28%), Positives = 98/180 (54%), Gaps = 13/180 (7%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRA---IVIRAYYYTTVVGDPE 57 M P ++++F+DG N++ + + G+ D R++L+ F++ +I A++YT + + Sbjct: 1 MVLPMSRLSIFVDGNNMFYAQQKNGWFFDPRRVLEYFKNEQPETTLINAFWYTGLKDPQD 60 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTEN-CGRKRVKSSMDVELAVDAFEQSEGLEHL 116 Q D L G+ V K+ KE+ ++ GR K+++D+E+ VD F + + + Sbjct: 61 Q-----RGFRDALISLGYTVRTKILKEYYDDVSGRYSQKANLDIEIVVDMFNTVDQYDRV 115 Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 V+FSGDG F + L+ K +T+VST M + +LR D ++DL ++++I + Sbjct: 116 VLFSGDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIRDQIEKT 171 >gi|325282672|ref|YP_004255213.1| hypothetical protein Deipr_0426 [Deinococcus proteolyticus MRP] gi|324314481|gb|ADY25596.1| Domain of unknown function DUF88 [Deinococcus proteolyticus MRP] Length = 214 Score = 190 bits (484), Expect = 6e-47, Method: Composition-based stats. Identities = 56/171 (32%), Positives = 92/171 (53%), Gaps = 7/171 (4%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 ++IALF+DGA++Y+++K LG++ D+RK+L+ FR R + A+YYT + P Q Sbjct: 4 QRIALFVDGASIYSAAKRLGWNFDHRKVLEYFRERGRLHNAFYYTAL---PAQFDDKQKR 60 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125 D L Y G+ V + +E + G ++S+D+EL D + + V+ SG G F Sbjct: 61 FTDALTYMGYTVRTQPLRETVDESGVSYRQTSLDIELVTDLLTGLDHFDAAVLMSGGGGF 120 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 + L+ + K+ +VS P M S +LR AD ++DL L+ R Sbjct: 121 ERPLEVLRARGKRTVVVSI----PEMTSYELRNAADEYLDLRDLRQRFERP 167 >gi|22298340|ref|NP_681587.1| hypothetical protein tll0798 [Thermosynechococcus elongatus BP-1] gi|22294519|dbj|BAC08349.1| tll0798 [Thermosynechococcus elongatus BP-1] Length = 176 Score = 190 bits (484), Expect = 6e-47, Method: Composition-based stats. Identities = 49/178 (27%), Positives = 93/178 (52%), Gaps = 12/178 (6%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAI--VIRAYYYTTVVGDPEQ 58 M +E++++FIDG N++ + + G+ D R++L+ F ++ A++YT + +Q Sbjct: 1 MLPAQERLSIFIDGNNMFYAQQKNGWFFDPRRVLEFFTRDPKIVLVNAFWYTGLKDMQDQ 60 Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENC-GRKRVKSSMDVELAVDAFEQSEGLEHLV 117 D L G+ V K+ KE+ + G+ K+++D+E+ +D F + +V Sbjct: 61 -----RSFRDALINLGYTVRTKLLKEYYDESLGKYYQKANLDIEIVIDMFNTVGQYDRVV 115 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 +FSGDG F + L+ K +T+VST M + +LR D ++DL ++ I + Sbjct: 116 LFSGDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNEIRPFIEK 169 >gi|119511234|ref|ZP_01630350.1| hypothetical protein N9414_18593 [Nodularia spumigena CCY9414] gi|119464112|gb|EAW45033.1| hypothetical protein N9414_18593 [Nodularia spumigena CCY9414] Length = 173 Score = 190 bits (483), Expect = 9e-47, Method: Composition-based stats. Identities = 52/179 (29%), Positives = 96/179 (53%), Gaps = 13/179 (7%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAF---RSRAIVIRAYYYTTVVGDPE 57 M P ++++F+DG N++ + + G+ D R++L F +S +I A++YT + + Sbjct: 1 MGSPMNRLSIFVDGNNMFYAQQKNGWFFDPRRVLDYFKHEQSDTTLINAFWYTGLKDPQD 60 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENC-GRKRVKSSMDVELAVDAFEQSEGLEHL 116 Q D L G+ V K+ KE+ ++ GR K+++D+E+ VD F + + + Sbjct: 61 Q-----RGFRDALISLGYTVRTKILKEYYDDSSGRYSQKANLDIEIVVDMFNTVDQYDRV 115 Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 V+FSGDG F + L+ K +T+VST M + +LR D ++DL +++ I + Sbjct: 116 VLFSGDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIRDSIEK 170 >gi|254413060|ref|ZP_05026832.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC 7420] gi|196180224|gb|EDX75216.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC 7420] Length = 172 Score = 189 bits (482), Expect = 1e-46, Method: Composition-based stats. Identities = 50/179 (27%), Positives = 95/179 (53%), Gaps = 12/179 (6%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAI--VIRAYYYTTVVGDPEQ 58 M +I++F+DG N++ + + G+ D +++L+ FR ++ A++YT + +Q Sbjct: 1 MPCSMNRISIFVDGNNMFYAQQKNGWFFDPKRVLEYFRKEPHIVLVNAFWYTGLKDPQDQ 60 Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENC-GRKRVKSSMDVELAVDAFEQSEGLEHLV 117 D L G+ V K+ KE+ ++ GR K+++D+E+ VD F E + ++ Sbjct: 61 -----RGFRDALISLGYTVRTKILKEYYDDSSGRYSQKANLDIEIVVDMFNTVEQYDRVI 115 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 +FSGDG F + L+ K +T+VST M + +LR D ++DL +++ I + Sbjct: 116 LFSGDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIRDYIEKT 170 >gi|282899662|ref|ZP_06307626.1| protein of unknown function DUF88 [Cylindrospermopsis raciborskii CS-505] gi|281195541|gb|EFA70474.1| protein of unknown function DUF88 [Cylindrospermopsis raciborskii CS-505] Length = 230 Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats. Identities = 57/173 (32%), Positives = 90/173 (52%), Gaps = 12/173 (6%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 R ++A+FIDG NL+ ++ +G +IDY KLL + ++RA++YT V E+Q Sbjct: 55 NRGRVAIFIDGLNLFHAALQIGIEIDYVKLLCRLTQTSRLLRAFFYTGVDTSKEKQ---- 110 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L W+ NG++VV K TE+ K +++VE+AVD + + V+ SGDG Sbjct: 111 QGFLLWMRRNGYRVVTKDIIALTESG----KKPNLNVEIAVDMITLAPYYDTAVLVSGDG 166 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 V A+ +V ++ +M SD L ADYF+D +K I +D Sbjct: 167 DLAYAVNAVTSLGSRVEVI----GLQTMTSDSLIDVADYFIDFDSIKQYIQKD 215 >gi|172038230|ref|YP_001804731.1| hypothetical protein cce_3317 [Cyanothece sp. ATCC 51142] gi|171699684|gb|ACB52665.1| unknown [Cyanothece sp. ATCC 51142] Length = 178 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 50/176 (28%), Positives = 95/176 (53%), Gaps = 12/176 (6%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAI--VIRAYYYTTVVGDPEQQFS 61 +E++++F+DG N++ + + G+ D R++L F + +I A++YT + +Q Sbjct: 10 QKERLSIFVDGNNMFYAQQKNGWFFDPRRVLDYFTNDPHVSLINAFWYTGLKDSQDQ--- 66 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTEN-CGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 D L G+ V K+ KE+ ++ GR K+++D+E+ VD F + + +++FS Sbjct: 67 --RGFRDALISLGYTVRTKILKEYYDDTSGRYSQKANLDIEIVVDMFNTVDQYDRVILFS 124 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 GDG F + L+ K +T+VST M + +LR D ++DL +K+ I + Sbjct: 125 GDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIKDSIEKQ 176 >gi|67925984|ref|ZP_00519254.1| Protein of unknown function DUF88 [Crocosphaera watsonii WH 8501] gi|67852173|gb|EAM47662.1| Protein of unknown function DUF88 [Crocosphaera watsonii WH 8501] Length = 178 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 50/176 (28%), Positives = 95/176 (53%), Gaps = 12/176 (6%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAI--VIRAYYYTTVVGDPEQQFS 61 +E++++F+DG N++ + + G+ D R++L F + +I A++YT + +Q Sbjct: 10 QKERLSIFVDGNNMFYAQQKNGWFFDPRRVLDYFTNDPHVSLINAFWYTGLKDSQDQ--- 66 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTEN-CGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 D L G+ V K+ KE+ ++ GR K+++D+E+ VD F + + +++FS Sbjct: 67 --RGFRDALISLGYTVRTKILKEYYDDTSGRYSQKANLDIEIVVDMFNTVDQYDRVILFS 124 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 GDG F + L+ K +T+VST M + +LR D ++DL +K+ I + Sbjct: 125 GDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIKDSIEKQ 176 >gi|298492621|ref|YP_003722798.1| hypothetical protein Aazo_4322 ['Nostoc azollae' 0708] gi|298234539|gb|ADI65675.1| protein of unknown function DUF88 ['Nostoc azollae' 0708] Length = 173 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 50/180 (27%), Positives = 97/180 (53%), Gaps = 13/180 (7%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRA---IVIRAYYYTTVVGDPE 57 M ++++F+DG N++ + + G+ D R++L+ F++ +I A++YT + + Sbjct: 1 MGSMMNRLSIFVDGNNMFYAQQKNGWFFDPRRVLEYFKNEQPETTLINAFWYTGLKDPQD 60 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTEN-CGRKRVKSSMDVELAVDAFEQSEGLEHL 116 Q D L G+ V K+ KE+ ++ GR K+++D+E+ VD F + + + Sbjct: 61 Q-----RGFRDALISLGYTVRTKILKEYYDDVSGRYSQKANLDIEIVVDMFNTVDQYDRV 115 Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 V+FSGDG F + L+ K +T+VST M + +LR D ++DL ++++I + Sbjct: 116 VLFSGDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIRDQIEKT 171 >gi|240139942|ref|YP_002964419.1| hypothetical protein MexAM1_META1p3405 [Methylobacterium extorquens AM1] gi|240009916|gb|ACS41142.1| Conserved hypothetical protein (DUF88) [Methylobacterium extorquens AM1] Length = 168 Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 64/124 (51%), Positives = 97/124 (78%) Query: 56 PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEH 115 +Q++S + PL+DWL YNG++VV K KEFT++ GR+++K +MD+ELA+DA E + ++H Sbjct: 3 EDQEYSSIRPLIDWLDYNGYRVVTKPVKEFTDSAGRRKIKGNMDIELAIDALELAPHIDH 62 Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 +V+FSGDG F +LV A+QR+ +V++VST+ + P+M +D LRRQAD F+DLA+L + I R Sbjct: 63 MVLFSGDGDFRSLVEAIQRRGVRVSVVSTIQTQPAMIADDLRRQADEFIDLAHLASRIGR 122 Query: 176 DPDE 179 DP E Sbjct: 123 DPSE 126 >gi|220910043|ref|YP_002485354.1| hypothetical protein Cyan7425_4688 [Cyanothece sp. PCC 7425] gi|219866654|gb|ACL46993.1| protein of unknown function DUF88 [Cyanothece sp. PCC 7425] Length = 172 Score = 188 bits (478), Expect = 3e-46, Method: Composition-based stats. Identities = 50/172 (29%), Positives = 93/172 (54%), Gaps = 12/172 (6%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAI--VIRAYYYTTVVGDPEQQFSPLH 64 ++++F+DG N++ + + G+ D R++L F S ++ A++YT + +Q Sbjct: 7 RVSIFVDGNNMFYAQQKNGWFFDPRRVLDYFTSEPSVTLVNAFWYTGLKDPQDQ-----R 61 Query: 65 PLLDWLHYNGFQVVAKVAKEF-TENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 D L G+ V K+ KE+ +N GR K+++D+E+ VD F E + +++FSGDG Sbjct: 62 GFRDALISLGYTVRTKILKEYYDDNSGRYSQKANLDIEIVVDMFNTVEQYDRVILFSGDG 121 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 F + L+ K +T+VST M + +LR D ++DL ++ +I + Sbjct: 122 DFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIRPKIEK 169 >gi|16332216|ref|NP_442944.1| hypothetical protein slr0755 [Synechocystis sp. PCC 6803] gi|1653846|dbj|BAA18756.1| slr0755 [Synechocystis sp. PCC 6803] Length = 185 Score = 188 bits (478), Expect = 3e-46, Method: Composition-based stats. Identities = 48/175 (27%), Positives = 93/175 (53%), Gaps = 12/175 (6%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRA--IVIRAYYYTTVVGDPEQQFSP 62 R+++++F+DG N++ + + G+ D R++L F ++ A++YT + +Q Sbjct: 11 RDRLSIFVDGNNMFYAQQKNGWFFDPRRVLSFFTEDPSVKLVNAFWYTGLKDTQDQ---- 66 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTEN-CGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 D L G+ V K+ KE+ ++ G+ K+++D+E+ VD F + + +V+FSG Sbjct: 67 -RGFRDALISLGYTVRTKILKEYYDDISGKYSQKANLDIEIVVDMFNTVDQYDRVVLFSG 125 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 DG F + L+ K +T+VST M + +LR D ++DL ++ I + Sbjct: 126 DGDFERAIELLRSKSTHITVVST----EGMIARELRNATDRYIDLNDIRPAIEKQ 176 >gi|186681406|ref|YP_001864602.1| hypothetical protein Npun_F0925 [Nostoc punctiforme PCC 73102] gi|186463858|gb|ACC79659.1| protein of unknown function DUF88 [Nostoc punctiforme PCC 73102] Length = 169 Score = 188 bits (477), Expect = 4e-46, Method: Composition-based stats. Identities = 50/176 (28%), Positives = 96/176 (54%), Gaps = 13/176 (7%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAF---RSRAIVIRAYYYTTVVGDPEQQFS 61 ++++F+DG N++ + + G+ D R++L+ F +S +I A++YT + +Q Sbjct: 1 MNRLSIFVDGNNMFYAQQKNGWFFDPRRVLEYFKHEQSETTLINAFWYTGLKDPQDQ--- 57 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTEN-CGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 D L G+ V K+ KE+ ++ GR K+++D+E+ VD F + + +V+FS Sbjct: 58 --RGFRDALISLGYTVRTKILKEYYDDTSGRYSQKANLDIEIVVDMFNTVDQYDRVVLFS 115 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 GDG F + L+ K +T+VST M + +LR D ++DL ++++I + Sbjct: 116 GDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIRDQIEKT 167 >gi|56752213|ref|YP_172914.1| hypothetical protein syc2204_c [Synechococcus elongatus PCC 6301] gi|81300700|ref|YP_400908.1| hypothetical protein Synpcc7942_1891 [Synechococcus elongatus PCC 7942] gi|56687172|dbj|BAD80394.1| hypothetical protein [Synechococcus elongatus PCC 6301] gi|81169581|gb|ABB57921.1| conserved hypothetical protein [Synechococcus elongatus PCC 7942] gi|121309776|dbj|BAF44194.1| LabA [Synechococcus elongatus PCC 7942] Length = 186 Score = 186 bits (474), Expect = 9e-46, Method: Composition-based stats. Identities = 51/179 (28%), Positives = 93/179 (51%), Gaps = 13/179 (7%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAI--VIRAYYYTTVVGDPEQQFSPLH 64 ++A+FIDG N++ + + G+ D R++L F +R ++ AY+YT + +Q Sbjct: 7 RLAIFIDGNNMFYAQQKNGWFFDPRRVLNYFANRPEIELVNAYWYTGLKDPQDQ-----R 61 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCG--RKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122 D L G+ V K+ KEF + R ++++D+E+ +D F E + +V+FSGD Sbjct: 62 GFRDALVSLGYTVRTKMLKEFHDESNGNRYFQRANLDIEIVIDMFNTVEQYDEIVLFSGD 121 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 G F + L+ K +T+VST M + +LR D ++DL +++ I + + Sbjct: 122 GDFERAIELLRAKQTHITVVST----DGMIARELRNATDRYIDLNDIRSFIEKTERPEP 176 >gi|113477728|ref|YP_723789.1| hypothetical protein Tery_4322 [Trichodesmium erythraeum IMS101] gi|110168776|gb|ABG53316.1| protein of unknown function DUF88 [Trichodesmium erythraeum IMS101] Length = 171 Score = 184 bits (467), Expect = 6e-45, Method: Composition-based stats. Identities = 50/177 (28%), Positives = 94/177 (53%), Gaps = 11/177 (6%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRA-IVIRAYYYTTVVGDPEQQ 59 M ++++F+DG N++ + + G+ D R++L+ F +I A++YT + +Q Sbjct: 1 MKISMNRLSIFVDGNNMFYAQQKNGWFFDPRRVLEYFNKPEVKLINAFWYTGLKDPQDQ- 59 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTEN-CGRKRVKSSMDVELAVDAFEQSEGLEHLVI 118 D L G+ V K+ KE+ ++ GR K+++D+E+ VD F + + +V+ Sbjct: 60 ----RGFRDALISLGYTVRTKILKEYYDDVSGRYSQKANLDIEIVVDMFNTVDQYDEVVL 115 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 FSGDG F + L+ K +T+VST M + +LR D ++DL ++ +I + Sbjct: 116 FSGDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDQYVDLNDIRYQIEK 168 >gi|86607567|ref|YP_476329.1| hypothetical protein CYB_0065 [Synechococcus sp. JA-2-3B'a(2-13)] gi|86556109|gb|ABD01066.1| conserved hypothetical protein [Synechococcus sp. JA-2-3B'a(2-13)] Length = 175 Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats. Identities = 52/181 (28%), Positives = 93/181 (51%), Gaps = 15/181 (8%) Query: 1 MFD--PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRS---RAIVIRAYYYTTVVGD 55 MF P ++++FIDG N++ + + G+ D R++L F ++ A++YT + Sbjct: 1 MFYHHPVTRVSIFIDGNNMFYAQQKNGWFFDPRRVLDYFVRSQPNVELVNAFWYTGIKDP 60 Query: 56 PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTE-NCGRKRVKSSMDVELAVDAFEQSEGLE 114 +Q D L GF V K+ KE+ + + GR K+++D+E+ +D F + Sbjct: 61 HDQ-----RAFRDALISMGFTVRTKILKEYRDEDSGRYSQKANLDIEIVIDMFNTVGQYD 115 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 +++FSGDG F V L+ K +T+VST M + +LR D ++DL ++ I Sbjct: 116 RIILFSGDGDFERAVELLRSKNTLITVVST----EGMIARELRNATDRYIDLNDIRPYIE 171 Query: 175 R 175 + Sbjct: 172 K 172 >gi|158333892|ref|YP_001515064.1| hypothetical protein AM1_0704 [Acaryochloris marina MBIC11017] gi|158304133|gb|ABW25750.1| conserved hypothetical protein [Acaryochloris marina MBIC11017] Length = 172 Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats. Identities = 46/173 (26%), Positives = 90/173 (52%), Gaps = 12/173 (6%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAI--VIRAYYYTTVVGDPEQQFSPLH 64 + ++F+DG N++ + + G+ D R++L F +I A++YT + +Q Sbjct: 7 RTSIFVDGNNMFYAQQKNGWFFDPRRILNYFTEPTDVRLINAFWYTGLKDPQDQ-----R 61 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENC-GRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 D L G+ V K+ KE+ ++ GR K+++D+E+ +D F + + +++ SGDG Sbjct: 62 GFRDALISLGYTVRTKILKEYYDDSSGRYSQKANLDIEIVIDMFNTVDQYDQVILLSGDG 121 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 F + L+ K +T+VST M + +LR D ++DL +++ I + Sbjct: 122 DFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNKIRDRIEKT 170 >gi|170077971|ref|YP_001734609.1| hypothetical protein SYNPCC7002_A1357 [Synechococcus sp. PCC 7002] gi|169885640|gb|ACA99353.1| Protein of unknown function (PF01936) [Synechococcus sp. PCC 7002] Length = 172 Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats. Identities = 51/178 (28%), Positives = 93/178 (52%), Gaps = 13/178 (7%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRA--IVIRAYYYTTVVGDPEQQ 59 F R ++++F+DG N++ + + + D R++L F +I A++YT + +Q Sbjct: 3 FYQR-RLSIFVDGNNMFYAQQKNNWFFDPRRVLDYFTCDPTVRLINAFWYTGLKDSQDQ- 60 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTEN-CGRKRVKSSMDVELAVDAFEQSEGLEHLVI 118 D L G+ V K+ KE+ ++ GR K+++D+E+ VD F + + +++ Sbjct: 61 ----RGFRDALISLGYTVRTKILKEYYDDVSGRYSQKANLDIEIVVDMFNTVDQYDQVIL 116 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 FSGDG F + L+ K +T+VST M + +LR D ++DL L+ EI + Sbjct: 117 FSGDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDCYIDLNNLRAEIEKT 170 >gi|86605299|ref|YP_474062.1| hypothetical protein CYA_0583 [Synechococcus sp. JA-3-3Ab] gi|86553841|gb|ABC98799.1| conserved hypothetical protein [Synechococcus sp. JA-3-3Ab] Length = 174 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 52/180 (28%), Positives = 93/180 (51%), Gaps = 14/180 (7%) Query: 1 MF-DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRS---RAIVIRAYYYTTVVGDP 56 MF P ++++FIDG N++ + + G+ D R++L F ++ A++YT + Sbjct: 1 MFRHPVTRVSIFIDGNNMFYAQQKNGWFFDPRRVLDYFVRSQPNVELVNAFWYTGIKDPN 60 Query: 57 EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTE-NCGRKRVKSSMDVELAVDAFEQSEGLEH 115 +Q D L GF V K+ KE+ + + GR K+++D+E+ +D F + Sbjct: 61 DQ-----RAFRDALISLGFTVRTKILKEYRDEDSGRYSQKANLDIEIVIDMFNTVGQYDR 115 Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 +++FSGDG F V L+ K +T+VST M + +LR D ++DL ++ I + Sbjct: 116 IILFSGDGDFERAVELLRSKNTLITVVST----EGMIARELRNATDRYIDLNDIRPYIEK 171 >gi|209528287|ref|ZP_03276748.1| protein of unknown function DUF88 [Arthrospira maxima CS-328] gi|284053607|ref|ZP_06383817.1| hypothetical protein AplaP_19301 [Arthrospira platensis str. Paraca] gi|209491273|gb|EDZ91667.1| protein of unknown function DUF88 [Arthrospira maxima CS-328] gi|291565674|dbj|BAI87946.1| hypothetical protein [Arthrospira platensis NIES-39] Length = 173 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 52/179 (29%), Positives = 97/179 (54%), Gaps = 13/179 (7%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRA---IVIRAYYYTTVVGDPE 57 M + R ++++F+DG N++ + + G+ D R++L F+ I I A++YT + + Sbjct: 1 MPNLRNRLSIFVDGNNMFYAQQKNGWFFDPRRVLDYFKHEQADLIFINAFWYTGLKDPQD 60 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENC-GRKRVKSSMDVELAVDAFEQSEGLEHL 116 Q D L G+ V K+ KE+ ++ GR K+++D+E+ VD F + + + Sbjct: 61 Q-----RGFRDALISLGYTVRTKILKEYYDDSSGRYSQKANLDIEIVVDMFNTVDQYDRV 115 Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 V+FSGDG F + L+ K +T+VST M + +LR D ++DL ++++I + Sbjct: 116 VLFSGDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIRDQIEK 170 >gi|193782651|ref|NP_435936.2| hypothetical protein SMa1264 [Sinorhizobium meliloti 1021] gi|46403700|gb|AAS92906.1| hypothetical protein [Sinorhizobium meliloti] gi|193073107|gb|AAK65348.2| Conserved hypothetical protein [Sinorhizobium meliloti 1021] Length = 177 Score = 181 bits (459), Expect = 5e-44, Method: Composition-based stats. Identities = 73/145 (50%), Positives = 103/145 (71%), Gaps = 2/145 (1%) Query: 35 KAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRV 94 + F S I YY +V D Q+ + L+DWL YNG+Q+V K +EFT+ GR+R+ Sbjct: 18 RLFGSAPICCGGNYYAPLVED--QETPTIRLLIDWLDYNGYQMVTKPIREFTDTLGRRRI 75 Query: 95 KSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASD 154 K +MD++LA+DA E ++ +HLVIFSGDG FT++VAALQRK +VT+VST+ + P M S Sbjct: 76 KGNMDIDLAIDAIELAKTADHLVIFSGDGNFTSVVAALQRKGCRVTVVSTMATRPPMISG 135 Query: 155 QLRRQADYFMDLAYLKNEIARDPDE 179 +LRR+AD+F+DLA L+ EIAR+ E Sbjct: 136 ELRREADHFIDLAKLRGEIAREHAE 160 >gi|332711770|ref|ZP_08431701.1| hypothetical protein LYNGBM3L_65720 [Lyngbya majuscula 3L] gi|332349748|gb|EGJ29357.1| hypothetical protein LYNGBM3L_65720 [Lyngbya majuscula 3L] Length = 165 Score = 180 bits (458), Expect = 6e-44, Method: Composition-based stats. Identities = 49/169 (28%), Positives = 92/169 (54%), Gaps = 12/169 (7%) Query: 10 LFIDGANLYASSKALGFDIDYRKLLKAFRSRA--IVIRAYYYTTVVGDPEQQFSPLHPLL 67 +F+DG N++ + + G+ D R++L F++ ++ A++YT + +Q Sbjct: 3 IFVDGNNMFYAQQKNGWFFDPRRVLDYFKNEPGITLVNAFWYTGLKDPQDQ-----RGFR 57 Query: 68 DWLHYNGFQVVAKVAKEF-TENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126 D L G+ V K+ KE+ +N GR K+++D+E+ VD F E + +++FSGDG F Sbjct: 58 DALISLGYTVRTKILKEYYDDNSGRYSQKANLDIEIVVDMFNTVEQYDKVILFSGDGDFE 117 Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 + L+ K +T+VST M + +LR D ++DL ++++I + Sbjct: 118 RAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDVRDQIEK 162 >gi|113969424|ref|YP_733217.1| hypothetical protein Shewmr4_1080 [Shewanella sp. MR-4] gi|113884108|gb|ABI38160.1| protein of unknown function DUF88 [Shewanella sp. MR-4] Length = 184 Score = 176 bits (448), Expect = 8e-43, Method: Composition-based stats. Identities = 41/167 (24%), Positives = 76/167 (45%), Gaps = 13/167 (7%) Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 +P ++IALF+D N+Y + + A +Y KL + ++ ++ A Y GD Q Sbjct: 26 NPLKRIALFVDVQNIYYTCREAYQRQFNYCKLWQQLSAQGEIVSAIAYAIHRGDDGQL-- 83 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 D L + GF++ K + ++ K DV + +D E + ++ +++ SG Sbjct: 84 ---KFQDALRHIGFELKLKPFIQRSDGS----AKGDWDVGITIDVLEMAPEVDTVILLSG 136 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 DG F L+ +++K I + V PS+ + L A F + Sbjct: 137 DGDFALLLDKIRQKYA---IEAEVYGVPSLTAKSLMEAASCFHPIEE 180 >gi|319959046|gb|ADV90687.1| LabA [Nostoc linckia EC102] gi|319959048|gb|ADV90688.1| LabA [Nostoc linckia EC105] gi|319959050|gb|ADV90689.1| LabA [Nostoc linckia EC106] gi|319959052|gb|ADV90690.1| LabA [Nostoc linckia EC109] gi|319959054|gb|ADV90691.1| LabA [Nostoc linckia EC113] gi|319959056|gb|ADV90692.1| LabA [Nostoc linckia EC119] gi|319959058|gb|ADV90693.1| LabA [Nostoc linckia EC121] gi|319959060|gb|ADV90694.1| LabA [Nostoc linckia EC205] gi|319959062|gb|ADV90695.1| LabA [Nostoc linckia EC206] gi|319959064|gb|ADV90696.1| LabA [Nostoc linckia EC220] gi|319959066|gb|ADV90697.1| LabA [Nostoc linckia EC221] gi|319959068|gb|ADV90698.1| LabA [Nostoc linckia EC222] gi|319959070|gb|ADV90699.1| LabA [Nostoc linckia EC326] gi|319959072|gb|ADV90700.1| LabA [Nostoc linckia NK217] gi|319959074|gb|ADV90701.1| LabA [Nostoc linckia EC501] gi|319959076|gb|ADV90702.1| LabA [Nostoc linckia EC505] gi|319959078|gb|ADV90703.1| LabA [Nostoc linckia EC519] gi|319959080|gb|ADV90704.1| LabA [Nostoc linckia EC521] gi|319959082|gb|ADV90705.1| LabA [Nostoc linckia EC602] gi|319959084|gb|ADV90706.1| LabA [Nostoc linckia EC724] gi|319959086|gb|ADV90707.1| LabA [Nostoc linckia EC204] gi|319959090|gb|ADV90709.1| LabA [Nostoc linckia EC210] gi|319959092|gb|ADV90710.1| LabA [Nostoc linckia EC322] gi|319959096|gb|ADV90712.1| LabA [Nostoc linckia NK207] gi|319959098|gb|ADV90713.1| LabA [Nostoc linckia EC703] gi|319959100|gb|ADV90714.1| LabA [Nostoc linckia EC720] Length = 173 Score = 173 bits (440), Expect = 8e-42, Method: Composition-based stats. Identities = 49/157 (31%), Positives = 81/157 (51%), Gaps = 12/157 (7%) Query: 23 ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVA 82 LG +IDY KLL + ++RA++YT V E+Q L W+ NG++V+AK Sbjct: 2 QLGIEIDYTKLLCRLTGGSRLLRAFFYTGVDRTNEKQ----QGFLLWMRRNGYRVIAKDL 57 Query: 83 KEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIV 142 + + K+++DVE+AVD + + V+ SGDG V ++ + +V +V Sbjct: 58 VQLPDGS----KKANLDVEIAVDMMALVDSYDTAVLVSGDGDLAYAVNSVSYRGVRVEVV 113 Query: 143 STVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 S SM SD L +D ++DL +K +I + P + Sbjct: 114 SL----RSMTSDSLINVSDRYIDLEAIKEDIQKTPRQ 146 >gi|119776250|ref|YP_928990.1| hypothetical protein Sama_3118 [Shewanella amazonensis SB2B] gi|119768750|gb|ABM01321.1| conserved hypothetical protein [Shewanella amazonensis SB2B] Length = 157 Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 13/165 (7%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIALF+D N+Y + + A +YRKL + S ++ A Y D Q Sbjct: 1 MKKIALFVDVQNIYYTCREAYQRQFNYRKLWQQLCSEGEIVSATAYAIHRSDDGQL---- 56 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 D L + GF++ K + ++ K DV + +D E + ++ +++ SGDG Sbjct: 57 -KFQDALRHIGFELKLKPFIQRSDGS----AKGDWDVGITIDVLETAPEVDTVILLSGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F L+ +++K + + V PS+ + L A F + Sbjct: 112 DFALLLDKIRQKYA---VEAEVYGVPSLTAKSLMEAASRFHPIDE 153 >gi|146293884|ref|YP_001184308.1| hypothetical protein Sputcn32_2790 [Shewanella putrefaciens CN-32] gi|145565574|gb|ABP76509.1| protein of unknown function DUF88 [Shewanella putrefaciens CN-32] Length = 157 Score = 171 bits (435), Expect = 3e-41, Method: Composition-based stats. Identities = 45/165 (27%), Positives = 75/165 (45%), Gaps = 13/165 (7%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIALF+D N+Y + + A G +YRKL + ++ A Y GD Q Sbjct: 1 MKKIALFVDVQNIYYTCREAYGRQFNYRKLWQHLGYEGDIVLAVAYAIHKGDDGQL---- 56 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 D L + GF+V K + ++ K DV + +D E + ++ +++ SGDG Sbjct: 57 -KFQDALKHIGFEVKLKPFIQRSDGS----AKGDWDVGITIDIMEAASEVDTVILLSGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F L LQ+ +K + + V P++ + LR A F + Sbjct: 112 DFDLL---LQKIHQKYGVETQVYGVPTLTAKSLRDAASQFHPIDE 153 >gi|319959094|gb|ADV90711.1| LabA [Nostoc linckia NK105] Length = 160 Score = 171 bits (435), Expect = 3e-41, Method: Composition-based stats. Identities = 49/157 (31%), Positives = 81/157 (51%), Gaps = 12/157 (7%) Query: 23 ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVA 82 LG +IDY KLL + ++RA++YT V E+Q L W+ NG++V+AK Sbjct: 2 QLGIEIDYTKLLCRLTGGSRLLRAFFYTGVDRTNEKQ----QGFLLWMRRNGYRVIAKDL 57 Query: 83 KEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIV 142 + + K+++DVE+AVD + + V+ SGDG V ++ + +V +V Sbjct: 58 VQLPDGS----KKANLDVEIAVDMMALVDSYDTAVLVSGDGDLAYAVNSVSYRGVRVEVV 113 Query: 143 STVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 S SM SD L +D ++DL +K +I + P + Sbjct: 114 SL----RSMTSDSLINVSDRYLDLEAIKEDIQKTPRQ 146 >gi|114046654|ref|YP_737204.1| hypothetical protein Shewmr7_1148 [Shewanella sp. MR-7] gi|113888096|gb|ABI42147.1| protein of unknown function DUF88 [Shewanella sp. MR-7] Length = 157 Score = 171 bits (435), Expect = 3e-41, Method: Composition-based stats. Identities = 41/164 (25%), Positives = 76/164 (46%), Gaps = 13/164 (7%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIALF+D N+Y + + A +YRKL + ++ ++ A Y GD Q Sbjct: 1 MKKIALFVDVQNIYYTCREAYQRQFNYRKLWQQLSTQGEIVSAIAYAIHRGDDGQL---- 56 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 D L + GF++ K + ++ K DV + +D E + ++ +++ SGDG Sbjct: 57 -KFQDALRHIGFELKLKPFIQRSDGS----AKGDWDVGITIDVLEMAPEVDTVILLSGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F L+ +++K + + V PS+ + L A F+ + Sbjct: 112 DFALLLDKIRQKYA---VEAEVYGVPSLTAKSLMDAATQFIPIT 152 >gi|117919529|ref|YP_868721.1| hypothetical protein Shewana3_1080 [Shewanella sp. ANA-3] gi|117611861|gb|ABK47315.1| protein of unknown function DUF88 [Shewanella sp. ANA-3] Length = 170 Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats. Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 13/166 (7%) Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 P +KIALF+D N+Y + + A +YRKL + ++ ++ A Y GD Q Sbjct: 12 YPLKKIALFVDVQNIYYTCREAYQRQFNYRKLWQQLSAQGEIVSAIAYAIHRGDDGQL-- 69 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 D L + GF++ K + ++ K DV + +D E + ++ +++ SG Sbjct: 70 ---KFQDALRHIGFELKLKPFIQRSDGS----AKGDWDVGITIDVLEMAPEVDTVILLSG 122 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 DG F L+ +++K I + V PS+ + L A F + Sbjct: 123 DGDFALLLDKIRQKYA---IEAEVYGVPSLTAKSLMDAATRFTPIT 165 >gi|120598045|ref|YP_962619.1| hypothetical protein Sputw3181_1222 [Shewanella sp. W3-18-1] gi|120558138|gb|ABM24065.1| protein of unknown function DUF88 [Shewanella sp. W3-18-1] Length = 157 Score = 171 bits (434), Expect = 4e-41, Method: Composition-based stats. Identities = 45/165 (27%), Positives = 75/165 (45%), Gaps = 13/165 (7%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIALF+D N+Y + + A G +YRKL + ++ A Y GD Q Sbjct: 1 MKKIALFVDVQNIYYTCREAYGRQFNYRKLWQHLGYEGDIVLAVAYAIHKGDDGQL---- 56 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 D L + GF+V K + ++ K DV + +D E + ++ +++ SGDG Sbjct: 57 -KFQDALKHIGFEVKLKPFIQRSDGS----AKGDWDVGITIDIMEAASEVDTVILLSGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F L LQ+ +K + + V P++ + LR A F + Sbjct: 112 DFDLL---LQKIYQKYGVETQVYGVPTLTAKSLRDAASQFHPIDE 153 >gi|269837665|ref|YP_003319893.1| hypothetical protein Sthe_1637 [Sphaerobacter thermophilus DSM 20745] gi|269786928|gb|ACZ39071.1| protein of unknown function DUF88 [Sphaerobacter thermophilus DSM 20745] Length = 201 Score = 171 bits (434), Expect = 4e-41, Method: Composition-based stats. Identities = 59/162 (36%), Positives = 83/162 (51%), Gaps = 12/162 (7%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 +K+A+F D +NLY +++ LG IDY +LL + RAY Y V D P Sbjct: 8 DKVAVFFDMSNLYFAARDLGIKIDYTRLLDFIVGGRRLHRAYAYMAVAPDDNTAV----P 63 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125 L WL NGF+V+ K + +++ K +D+ELAVD Q+ ++ VI SGDG F Sbjct: 64 FLTWLRRNGFRVITKTLRRYSDG----TSKGDLDMELAVDLLSQAPYIDVAVIVSGDGDF 119 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 T LV QR +V I ST P + L AD ++DL Sbjct: 120 TYLVDRAQRLGLRVEIAST----PRYTATDLMEIADRYIDLE 157 >gi|319427256|gb|ADV55330.1| conserved hypothetical protein [Shewanella putrefaciens 200] Length = 157 Score = 171 bits (433), Expect = 5e-41, Method: Composition-based stats. Identities = 45/165 (27%), Positives = 75/165 (45%), Gaps = 13/165 (7%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIALF+D N+Y + + A G +YRKL + ++ A Y GD Q Sbjct: 1 MKKIALFVDVQNIYYTCREAYGRQFNYRKLWQHLGYEGDIVLAVAYAIHKGDDGQL---- 56 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 D L + GF+V K + ++ K DV + +D E + ++ +++ SGDG Sbjct: 57 -KFQDALKHIGFEVKLKPFIQRSDGS----AKGDWDVGITIDIMEAASEVDTVILLSGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F L LQ+ +K + + V P++ + LR A F + Sbjct: 112 DFDLL---LQKIHQKYWVETQVYGVPTLTAKSLRDAASQFHPIDE 153 >gi|126175377|ref|YP_001051526.1| hypothetical protein Sbal_3176 [Shewanella baltica OS155] gi|304410207|ref|ZP_07391826.1| hypothetical protein Sbal183DRAFT_1664 [Shewanella baltica OS183] gi|307302082|ref|ZP_07581840.1| hypothetical protein Sbal175DRAFT_0340 [Shewanella baltica BA175] gi|125998582|gb|ABN62657.1| protein of unknown function DUF88 [Shewanella baltica OS155] gi|304351616|gb|EFM16015.1| hypothetical protein Sbal183DRAFT_1664 [Shewanella baltica OS183] gi|306914120|gb|EFN44541.1| hypothetical protein Sbal175DRAFT_0340 [Shewanella baltica BA175] Length = 157 Score = 170 bits (431), Expect = 8e-41, Method: Composition-based stats. Identities = 45/165 (27%), Positives = 74/165 (44%), Gaps = 13/165 (7%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIALF+D N+Y + + A G +YRKL + + A Y GD Q Sbjct: 1 MKKIALFVDVQNIYYTCREAYGRQFNYRKLWQHLGYEGDIALAVAYAIHKGDDGQL---- 56 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 D L + GF+V K + ++ K DV + +D E + ++ +++ SGDG Sbjct: 57 -KFQDALKHIGFEVKLKPFIQRSDGS----AKGDWDVGITIDIMEAASEVDTVILLSGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F L LQ+ +K + + V P++ + LR A F + Sbjct: 112 DFDLL---LQKIHQKYGVETQVYGVPTLTAKSLRDAASQFHPIDE 153 >gi|110597861|ref|ZP_01386144.1| conserved hypothetical protein [Chlorobium ferrooxidans DSM 13031] gi|110340586|gb|EAT59069.1| conserved hypothetical protein [Chlorobium ferrooxidans DSM 13031] Length = 280 Score = 169 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 50/173 (28%), Positives = 92/173 (53%), Gaps = 9/173 (5%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 + A+FIDGANL+ + + LG+ ID+ +L+ F + + A YY ++ + Sbjct: 1 MGRAAVFIDGANLFYTQRHLGWQIDFSRLMAFFMTGYASVEANYYVPASEPVSEENAA-- 58 Query: 65 PLLDWLHYNGFQVVAKVAKE-FTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L +G+++++K K+ + G +K ++DVEL VDA SE + ++FSGD Sbjct: 59 -FTRVLTAHGYRIISKPVKKIVNKETGEVIMKGNLDVELVVDALIGSEHYDTFILFSGDS 117 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD-YFMDLAYLKNEIAR 175 F L+ AL+ K K+V + ST +++ +L + + + DL+ L++ I Sbjct: 118 DFLPLLRALKEKGKEVIVYST----QGLSARELLAEPNVTYFDLSLLRDRIGH 166 >gi|332306977|ref|YP_004434828.1| hypothetical protein Glaag_2619 [Glaciecola agarilytica 4H-3-7+YE-5] gi|332174306|gb|AEE23560.1| hypothetical protein Glaag_2619 [Glaciecola agarilytica 4H-3-7+YE-5] Length = 158 Score = 169 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 39/162 (24%), Positives = 75/162 (46%), Gaps = 13/162 (8%) Query: 7 KIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 KIA+F+D N+Y +++ + +YRK + ++ ++ A Y T D +Q Sbjct: 4 KIAVFVDVQNIYYTTRDSYQKQFNYRKFWQHLSAQGDIVIANAYATERHDTQQ-----QK 58 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125 L + GF V K + ++ K DV + +D + + ++ +V+ SGDG F Sbjct: 59 FQSALKHIGFNVKLKPFIQRSDGS----AKGDWDVGITIDVLDAAPHVDTVVLLSGDGDF 114 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 L+ A + K K + + V P++ + L D F+++ Sbjct: 115 DLLLKAAKDKYK---VGTKVYGVPALTASSLMNACDEFIEIT 153 >gi|254421306|ref|ZP_05035024.1| conserved hypothetical protein [Synechococcus sp. PCC 7335] gi|196188795|gb|EDX83759.1| conserved hypothetical protein [Synechococcus sp. PCC 7335] Length = 328 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 56/173 (32%), Positives = 89/173 (51%), Gaps = 12/173 (6%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 + I +FIDG+NL+ ++ L ++DYR+LL + ++RAY+YT V E+Q Sbjct: 168 QSNDLITIFIDGSNLFYAASHLNIEVDYRRLLTSLVRGRRLLRAYFYTGVDPQNEKQ--- 224 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122 L WL+ +G +VV+K + K++M VE+AVD SE ++ + GD Sbjct: 225 -RGFLLWLNRHGHRVVSKELTNLPDGS----RKANMHVEMAVDMMRISEYCSNITLLGGD 279 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 G + L ++ + +VS SM SD L AD + DLA L++ I R Sbjct: 280 GNLAYALQVLSQRGTFIEVVSL----QSMTSDSLIDIADSYTDLADLRDRIKR 328 >gi|292655260|ref|YP_003535157.1| hypothetical protein HVO_1102 [Haloferax volcanii DS2] gi|291371756|gb|ADE03983.1| Uncharacterized conserved protein [Haloferax volcanii DS2] Length = 165 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 44/170 (25%), Positives = 80/170 (47%), Gaps = 14/170 (8%) Query: 3 DPREKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 P +++A+ D NLY ++++ +IDY LL+ + + RA Y P++ Sbjct: 5 HPDQRVAILADAQNLYHTAQSLYSRNIDYSSLLQKGTAGRALTRAIAYVIRADSPDEV-- 62 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 D L GF+ K K F G K+ D+ +A+DA ++ ++ +V+ SG Sbjct: 63 ---SFFDALVDIGFETKIKDIKTF----GDGSKKADWDLGIALDAVSLADHVDTVVLCSG 115 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 DG F L L+ + +V +++ +++L AD F+DL+ K Sbjct: 116 DGDFERLCTHLRHEGVRVEVMAF----KESTAEELVAAADTFIDLSERKE 161 >gi|17232331|ref|NP_488879.1| hypothetical protein alr4839 [Nostoc sp. PCC 7120] gi|17133976|dbj|BAB76538.1| alr4839 [Nostoc sp. PCC 7120] Length = 157 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 46/163 (28%), Positives = 86/163 (52%), Gaps = 13/163 (7%) Query: 17 LYASSKALGFDIDYRKLLKAF---RSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYN 73 ++ + + G+ D R++L+ F +S +I A++YT + +Q D L Sbjct: 1 MFYAQQKNGWFFDPRRVLEYFKNEQSETTLINAFWYTGLKDPQDQ-----RGFRDALISL 55 Query: 74 GFQVVAKVAKEF-TENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAAL 132 G+ V K+ KE+ ++ GR K+++D+E+ VD F + + +V+FSGDG F + L Sbjct: 56 GYTVRTKILKEYCDDSSGRYSQKANLDIEIVVDMFNTVDQYDRVVLFSGDGDFERAIELL 115 Query: 133 QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 + K +T+VST M + +LR D ++DL +++ I + Sbjct: 116 RSKNTHITVVST----EGMIARELRNATDRYIDLNDIRDRIEK 154 >gi|260773921|ref|ZP_05882836.1| hypothetical protein VIB_002400 [Vibrio metschnikovii CIP 69.14] gi|260610882|gb|EEX36086.1| hypothetical protein VIB_002400 [Vibrio metschnikovii CIP 69.14] Length = 157 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 13/165 (7%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 EKIA+ +D N+Y + + G +Y + + V +A Y +P+Q Sbjct: 1 MEKIAILVDVQNVYYTCRERYGRHFNYNQFWQQVTQGRHVFKANAYAIASKEPQQ----- 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF+V+ K + ++ K DV +A+DA+E ++ ++ +V+ SGDG Sbjct: 56 RQFHHILRGVGFEVMLKPFIQRSDGS----AKGDWDVGIALDAYELAQQVDTVVLVSGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F LV +Q++ + + V P + + L A F+ + Sbjct: 112 DFEPLVERIQQRFQ---VKVEVYGVPRLTAQSLIDVASQFVPIEQ 153 >gi|262274163|ref|ZP_06051975.1| hypothetical protein VHA_001139 [Grimontia hollisae CIP 101886] gi|262221973|gb|EEY73286.1| hypothetical protein VHA_001139 [Grimontia hollisae CIP 101886] Length = 161 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 44/169 (26%), Positives = 77/169 (45%), Gaps = 13/169 (7%) Query: 1 MFDPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59 M +KIA+F D N+Y +++ A G +YRKL + + V+ A Y D +Q Sbjct: 1 MGFSLKKIAVFADVQNVYYTTRQAYGRQFNYRKLWQRLQEMGDVVCANAYAIRRDDDQQI 60 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIF 119 D L + GF+V K + ++ K DV +A+D E + ++ +V+ Sbjct: 61 -----KFQDALRHIGFEVKLKPYIQRSDGS----TKGDWDVGIAIDVMEMAPEVDTVVLL 111 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 SGDG F L+ ++ + K + V P + ++ L D F+ + Sbjct: 112 SGDGDFDLLMNKVRERYGK---EAIVFGVPMLTANSLINSVDRFIGIED 157 >gi|153001687|ref|YP_001367368.1| hypothetical protein Shew185_3175 [Shewanella baltica OS185] gi|160876425|ref|YP_001555741.1| hypothetical protein Sbal195_3319 [Shewanella baltica OS195] gi|217972380|ref|YP_002357131.1| hypothetical protein Sbal223_1195 [Shewanella baltica OS223] gi|151366305|gb|ABS09305.1| protein of unknown function DUF88 [Shewanella baltica OS185] gi|160861947|gb|ABX50481.1| protein of unknown function DUF88 [Shewanella baltica OS195] gi|217497515|gb|ACK45708.1| protein of unknown function DUF88 [Shewanella baltica OS223] gi|315268615|gb|ADT95468.1| hypothetical protein Sbal678_3326 [Shewanella baltica OS678] Length = 157 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 45/164 (27%), Positives = 74/164 (45%), Gaps = 13/164 (7%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIALF+D N+Y + + A G +YRKL + + A Y GD Q Sbjct: 1 MKKIALFVDVQNIYYTCREAYGRQFNYRKLWQHLGYEGDIALAVAYAIHKGDDGQL---- 56 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 D L + GF+V K + ++ K DV + +D E + ++ +++ SGDG Sbjct: 57 -KFQDALKHIGFEVKLKPFIQRSDGS----AKGDWDVGITIDIMEAASEVDTVILLSGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F L LQ+ +K + + V P++ + LR A F + Sbjct: 112 DFDLL---LQKIHQKYGVETQVYGVPTLTAKSLRDAASQFHPID 152 >gi|300712124|ref|YP_003737938.1| hypothetical protein HacjB3_13825 [Halalkalicoccus jeotgali B3] gi|299125807|gb|ADJ16146.1| hypothetical protein HacjB3_13825 [Halalkalicoccus jeotgali B3] Length = 165 Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats. Identities = 42/170 (24%), Positives = 80/170 (47%), Gaps = 14/170 (8%) Query: 3 DPREKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 P +++A+ +D NLY S+ + +IDY LL+ ++RA Y PE++ Sbjct: 5 HPNQRVAVLVDSQNLYHSAHSLYSRNIDYSALLEEAVGGRELVRAIAYVIRADSPEEE-- 62 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 + L GF+ K K F G K+ DV +++DA + ++ +V+ +G Sbjct: 63 ---SFFEALIDIGFETKIKDIKTF----GDGSKKADWDVGMSLDAVTLASHVDTVVLCTG 115 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 DG F+ L + L+ + +V +++ +++L D F+DL + Sbjct: 116 DGDFSRLCSHLRHQGVRVEVMAL----GPSTAEELIEATDSFVDLTDREE 161 >gi|127512105|ref|YP_001093302.1| hypothetical protein Shew_1173 [Shewanella loihica PV-4] gi|126637400|gb|ABO23043.1| protein of unknown function DUF88 [Shewanella loihica PV-4] Length = 157 Score = 167 bits (425), Expect = 4e-40, Method: Composition-based stats. Identities = 39/164 (23%), Positives = 73/164 (44%), Gaps = 13/164 (7%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 ++IALF+D N+Y + + A G +Y + + + ++ A Y GD Q Sbjct: 1 MKRIALFVDVQNIYYTCRQAYGRQFNYHAMWQRLNEQGEIVTALAYAIDRGDDGQI---- 56 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 D L + GF+V K + ++ K DV + +D E + ++ +V+ SGDG Sbjct: 57 -KFQDALKHIGFEVKLKPYIQRSDGS----AKGDWDVGITIDIMEHAPEVDTVVLLSGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F L+ + +K ++ + V P +++ L A F + Sbjct: 112 DFALLLEHI---GRKYSLETEVYGVPELSAKALMDAATQFHPIE 152 >gi|262404166|ref|ZP_06080721.1| hypothetical protein VOA_002156 [Vibrio sp. RC586] gi|262349198|gb|EEY98336.1| hypothetical protein VOA_002156 [Vibrio sp. RC586] Length = 157 Score = 167 bits (425), Expect = 5e-40, Method: Composition-based stats. Identities = 42/165 (25%), Positives = 78/165 (47%), Gaps = 13/165 (7%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 EKIA+ +D N+Y + + G DY + V++A Y DP+Q+ Sbjct: 1 MEKIAILVDVQNVYYTCRERYGRHFDYNQFWSQATQGRAVVKANAYAIASKDPQQR--QF 58 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 H +L + GF+V+ K + ++ K DV +A+D +E ++ ++ +V+ SGDG Sbjct: 59 HHILRGI---GFEVMLKPFIQRSDGS----AKGDWDVGIALDGYELAQEVDTVVLVSGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F LV +Q++ + + V P + + L A+ F + + Sbjct: 112 DFEPLVTRIQQRFQ---VKVEVYGVPKLTAQNLIDVANQFHPIEH 153 >gi|167623131|ref|YP_001673425.1| hypothetical protein Shal_1197 [Shewanella halifaxensis HAW-EB4] gi|167353153|gb|ABZ75766.1| protein of unknown function DUF88 [Shewanella halifaxensis HAW-EB4] Length = 172 Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats. Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 13/167 (7%) Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 +KIALF+D N+Y + + A G +YRKL + + A Y GD Q Sbjct: 14 YTVKKIALFVDVQNIYYTCRQAYGRQFNYRKLWQHLGYEGNISAATAYAIHRGDDGQL-- 71 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 D L + GF+V K + ++ K DV + +D E + ++ +++ SG Sbjct: 72 ---KFQDALKHIGFEVKLKPFIQRSDGS----AKGDWDVGITIDIMEAASEVDCVILLSG 124 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 DG F L+ +++K I + V PS+ + L + F ++ Sbjct: 125 DGDFDLLMQKIKQK---YGIETQVYGVPSLTAKSLIDSVEQFHEIDD 168 >gi|27366806|ref|NP_762333.1| hypothetical protein VV2_0365 [Vibrio vulnificus CMCP6] gi|320158689|ref|YP_004191067.1| hypothetical protein VVM_01748 [Vibrio vulnificus MO6-24/O] gi|27358373|gb|AAO07323.1| hypothetical protein VV2_0365 [Vibrio vulnificus CMCP6] gi|319934001|gb|ADV88864.1| hypothetical protein VVMO6_03842 [Vibrio vulnificus MO6-24/O] Length = 162 Score = 167 bits (423), Expect = 7e-40, Method: Composition-based stats. Identities = 46/164 (28%), Positives = 77/164 (46%), Gaps = 15/164 (9%) Query: 7 KIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 K+A+F+D N+Y + K DY + ++ V+ A+ Y DP Q+ H Sbjct: 7 KVAIFVDVQNIYYTCKEKYRKHFDYNRFWQSATQGKQVVVAHAYAISSKDPGQR--QFHH 64 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125 +L + GF V K + + K DV LA+DAFE + ++ +++ SGDG F Sbjct: 65 ILRGI---GFDVKLKPFIQRWDGS----AKGDWDVGLALDAFEHAPMVDEVILLSGDGDF 117 Query: 126 TTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 LV +Q+K KKVT+ P + + L+ D ++ + Sbjct: 118 EILVERIQQKFGKKVTV----YGVPGLTAQNLQAVVDKYIPIED 157 >gi|289582398|ref|YP_003480864.1| hypothetical protein Nmag_2746 [Natrialba magadii ATCC 43099] gi|289531951|gb|ADD06302.1| protein of unknown function DUF88 [Natrialba magadii ATCC 43099] Length = 165 Score = 166 bits (422), Expect = 8e-40, Method: Composition-based stats. Identities = 45/170 (26%), Positives = 81/170 (47%), Gaps = 14/170 (8%) Query: 3 DPREKIALFIDGANLYASSKALG-FDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 P +++A+ +D NLY S+++L +IDY LL + RA Y PE++ Sbjct: 5 HPGQRVAVLVDAQNLYHSAQSLHSRNIDYSALLSKAVQDRQLTRAIAYVIRADAPEEE-- 62 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 D L GF+ K K F++ K+ DV +++DA + ++ +V+ +G Sbjct: 63 ---SFFDALVDIGFETKIKDIKTFSDG----TKKADWDVGMSLDAVTLANHVDTVVLCTG 115 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 DG F+ L + L+ + +V +++ S +D+L D F+DL Sbjct: 116 DGDFSRLCSHLRHEGVRVEVMAF----ESSTADELIDATDTFLDLDERPE 161 >gi|300866267|ref|ZP_07110978.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506] gi|300335738|emb|CBN56138.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506] Length = 157 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 45/163 (27%), Positives = 85/163 (52%), Gaps = 13/163 (7%) Query: 17 LYASSKALGFDIDYRKLLKAF---RSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYN 73 ++ + + G+ D R++L+ F + ++I A++YT + +Q D L Sbjct: 1 MFYAQQKNGWFFDPRRVLEYFKNAQQNVMLINAFWYTGLKDPQDQ-----RGFRDALISL 55 Query: 74 GFQVVAKVAKEFTEN-CGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAAL 132 G+ V K+ KE+ ++ GR K+++D+E+ VD F + + +V+FSGDG F + L Sbjct: 56 GYTVRTKILKEYYDDASGRYSQKANLDIEIVVDMFNTVDQYDQVVLFSGDGDFERAIELL 115 Query: 133 QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 + K +T+VST M + +LR D ++DL ++ I + Sbjct: 116 RSKNTHITVVST----EGMIARELRNATDRYIDLNEIREHIEK 154 >gi|284164086|ref|YP_003402365.1| hypothetical protein Htur_0796 [Haloterrigena turkmenica DSM 5511] gi|284013741|gb|ADB59692.1| protein of unknown function DUF88 [Haloterrigena turkmenica DSM 5511] Length = 165 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 14/170 (8%) Query: 3 DPREKIALFIDGANLYASSKALG-FDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 P +++A+ +D NLY ++++L +IDY LL + RA Y PE++ Sbjct: 5 HPGQRVAVLVDAQNLYHTAQSLHSRNIDYSALLDKAVQDRQLTRAIAYVIRADSPEEE-- 62 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 + L GF+ K K F++ K+ DV +++DA + ++ +V+ +G Sbjct: 63 ---SFFEALIDIGFEPKIKDIKTFSDG----TKKADWDVGMSLDAVTLANHVDTVVLCTG 115 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 DG F+ L + L+ + +V +++ S +++L AD F+DL Sbjct: 116 DGDFSRLCSHLRHEGVRVEVMAF----ESSTAEELIAAADSFVDLGERHE 161 >gi|313127027|ref|YP_004037297.1| hypothetical protein Hbor_22910 [Halogeometricum borinquense DSM 11551] gi|312293392|gb|ADQ67852.1| uncharacterized conserved protein [Halogeometricum borinquense DSM 11551] Length = 165 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 45/170 (26%), Positives = 82/170 (48%), Gaps = 14/170 (8%) Query: 3 DPREKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 P +++A+ D NLY S+++ +IDY LL+ S + RA Y PE++ Sbjct: 5 HPGQRVAILADAQNLYHSAQSLYSRNIDYSSLLEKGVSDRTLTRAIAYVVRADSPEEE-- 62 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 D L GF+ K K F G K+ DV +++DA + ++ +V+ +G Sbjct: 63 ---SFFDALVEIGFETKIKDIKTF----GDGSKKADWDVGMSLDAVTLANHVDTVVLCTG 115 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 DG F+ L + L+ + +V +++ +D+L AD F+D++ + Sbjct: 116 DGDFSRLCSHLRHEGVRVEVIAF----KESTADELIEAADTFLDMSDRQE 161 >gi|194335638|ref|YP_002017432.1| protein of unknown function DUF88 [Pelodictyon phaeoclathratiforme BU-1] gi|194308115|gb|ACF42815.1| protein of unknown function DUF88 [Pelodictyon phaeoclathratiforme BU-1] Length = 287 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 51/173 (29%), Positives = 89/173 (51%), Gaps = 9/173 (5%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 + A+FIDGANL+ + + LG+ ID+ +L+ F S + A YY ++ + Sbjct: 8 MGRAAVFIDGANLFYTQRHLGWQIDFSRLMAFFISGYATVEANYYVPASEPVSEENAA-- 65 Query: 65 PLLDWLHYNGFQVVAKVAKE-FTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L +G+ + +K K+ + G +K ++DVEL VDA +++ + ++FSGD Sbjct: 66 -FTRVLMAHGYHITSKPVKKIVNKETGVIVMKGNLDVELVVDALSRADQYDTFILFSGDS 124 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLR-RQADYFMDLAYLKNEIAR 175 F L+ AL+ K K+V + ST +++ +L + DLA LK I + Sbjct: 125 DFIPLLRALKEKGKEVLVYST----QGLSARELLAEPGIAYHDLALLKERIEQ 173 >gi|325283309|ref|YP_004255850.1| hypothetical protein Deipr_1081 [Deinococcus proteolyticus MRP] gi|324315118|gb|ADY26233.1| Domain of unknown function DUF88 [Deinococcus proteolyticus MRP] Length = 186 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 45/168 (26%), Positives = 78/168 (46%), Gaps = 10/168 (5%) Query: 4 PREKIALFIDGANLYASSKAL-GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 P+ ++ +FID NLY S++ L +++ LL A ++ A YT + S Sbjct: 6 PKPRVGIFIDTQNLYHSARDLLERTVNFETLLHAGADGRELVHAIAYTVERENE----ST 61 Query: 63 LHPLLDWLHYNGFQVV-AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 P + L G++V + FT + GR + + D+ + D + L+ +V+ SG Sbjct: 62 ARPFIYKLSTLGYKVRRMNLTLHFTSDSGRPIYEGNWDMGMVADMVRLMDHLDIVVLGSG 121 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 DG FT +V LQ + K+V +++ + +L AD F L L Sbjct: 122 DGDFTDIVEVLQERGKRVEVLAF----REHTAQKLIDAADKFTHLPDL 165 >gi|153214272|ref|ZP_01949289.1| conserved hypothetical protein [Vibrio cholerae 1587] gi|229515202|ref|ZP_04404662.1| hypothetical protein VCB_002859 [Vibrio cholerae TMA 21] gi|297579334|ref|ZP_06941262.1| conserved hypothetical protein [Vibrio cholerae RC385] gi|124115420|gb|EAY34240.1| conserved hypothetical protein [Vibrio cholerae 1587] gi|229347907|gb|EEO12866.1| hypothetical protein VCB_002859 [Vibrio cholerae TMA 21] gi|297536928|gb|EFH75761.1| conserved hypothetical protein [Vibrio cholerae RC385] Length = 157 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 44/166 (26%), Positives = 76/166 (45%), Gaps = 15/166 (9%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 EKIA+ +D N+Y + + G DY + V++A Y DP+Q+ Sbjct: 1 MEKIAILVDVQNVYYTCREQYGRHFDYNQFWSQVTQNRTVVKANAYAIASKDPQQR--QF 58 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 H +L + GF+V+ K + ++ K DV +A+D +E ++ ++ +V+ SGDG Sbjct: 59 HHILRGI---GFEVMLKPFIQRSDGS----AKGDWDVGIALDGYELAQEVDTVVLVSGDG 111 Query: 124 CFTTLVAAL-QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F LV + QR KV + P + + L A F + + Sbjct: 112 DFEPLVTRIAQRFQVKVEV----YGVPKLTAQHLIDVASQFHPIEH 153 >gi|114766684|ref|ZP_01445623.1| hypothetical protein 1100011001297_R2601_11634 [Pelagibaca bermudensis HTCC2601] gi|114541074|gb|EAU44129.1| hypothetical protein R2601_11634 [Roseovarius sp. HTCC2601] Length = 117 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 52/104 (50%), Positives = 76/104 (73%) Query: 77 VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKV 136 +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FSGDG F LV +LQR+ Sbjct: 1 MVTKPAKEYTDSQGRRKVKGNMDIELTVDAMELAPRVDHIVLFSGDGDFRPLVESLQRQG 60 Query: 137 KKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 +V++VST+ S P M +D+LRRQAD F++L L+ I R P E Sbjct: 61 VRVSVVSTIRSQPPMIADELRRQADNFIELDELREVIGRPPREQ 104 >gi|163751027|ref|ZP_02158258.1| hypothetical protein KT99_04722 [Shewanella benthica KT99] gi|161329188|gb|EDQ00187.1| hypothetical protein KT99_04722 [Shewanella benthica KT99] Length = 159 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 40/165 (24%), Positives = 76/165 (46%), Gaps = 13/165 (7%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIA+F+D N+Y + + A G +YRKL + + ++ A Y GD Q Sbjct: 3 NKKIAIFVDVQNIYYTCRQAYGRQFNYRKLWQHIGHKGDIVSATAYAIHKGDEGQL---- 58 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 D L + GF + K + ++ K DV +A+D E + ++ +++ SGDG Sbjct: 59 -KFQDALKHIGFDIKLKPFIQRSDGS----AKGDWDVGIAIDVMEAAAEVDTIILLSGDG 113 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F L+ + +K + + V P++ + L + F+++ Sbjct: 114 DFDLLMLKI---YQKYGVDTQVYGVPALTAKSLIDASCKFIEIDE 155 >gi|153800465|ref|ZP_01955051.1| conserved hypothetical protein [Vibrio cholerae MZO-3] gi|124124091|gb|EAY42834.1| conserved hypothetical protein [Vibrio cholerae MZO-3] Length = 157 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 44/166 (26%), Positives = 76/166 (45%), Gaps = 15/166 (9%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 EKIA+ +D N+Y + + G DY + V++A Y DP+Q+ Sbjct: 1 MEKIAILVDVQNVYYTCREQYGRHFDYNQFWSQVTQNRTVVKANAYAIASKDPQQR--QF 58 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 H +L + GF+V+ K + ++ K DV +A+D +E ++ ++ +V+ SGDG Sbjct: 59 HHILRGI---GFEVMLKPFIQRSDGS----AKGDWDVGIALDGYELAQEVDTVVLVSGDG 111 Query: 124 CFTTLVAAL-QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F LV + QR KV + P + + L A F + + Sbjct: 112 DFEPLVTRIAQRFQVKVEV----YGVPKLTAQHLIDVASQFHPIEH 153 >gi|110667467|ref|YP_657278.1| hypothetical protein HQ1506A [Haloquadratum walsbyi DSM 16790] gi|109625214|emb|CAJ51634.1| conserved hypothetical protein [Haloquadratum walsbyi DSM 16790] Length = 165 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 46/170 (27%), Positives = 81/170 (47%), Gaps = 14/170 (8%) Query: 3 DPREKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 P +++A+ D NLY ++++ IDY LLK S + RA Y PE++ Sbjct: 5 HPGQRVAVLADAQNLYHTAQSLYSQKIDYGSLLKKGVSGRELTRAIAYVIQADAPEEET- 63 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 + L GF+ K K F G K+ DV +++DA + ++ +V+ +G Sbjct: 64 ----FFEALVDIGFEPKIKQIKTF----GDGTKKADWDVGMSLDAVTLANHVDTVVLCTG 115 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 DG F+ L + L+ + +V ++S +D+L AD F+DL+ + Sbjct: 116 DGDFSRLCSHLRHEGVRVEVMSF----RESTADELVDAADTFIDLSARQE 161 >gi|157960982|ref|YP_001501016.1| hypothetical protein Spea_1154 [Shewanella pealeana ATCC 700345] gi|157845982|gb|ABV86481.1| protein of unknown function DUF88 [Shewanella pealeana ATCC 700345] Length = 157 Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats. Identities = 43/164 (26%), Positives = 75/164 (45%), Gaps = 13/164 (7%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 ++IALF+D N+Y + + A G +YRKL + V +A Y GD Q Sbjct: 1 MKRIALFVDVQNIYYTCRQAYGKQFNYRKLWQHLGYEGDVSQATAYAIHRGDDGQL---- 56 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 D L + GF+V K + ++ K DV + +D E + ++ +++ SGDG Sbjct: 57 -KFQDALKHIGFEVKLKPFIQRSDGS----AKGDWDVGITIDIMEAASEVDCVILLSGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F L +QR +K + + V P++ + L + F ++ Sbjct: 112 DFDLL---MQRIHQKYGVETQVYGVPTLTAKSLIDSVNQFHEID 152 >gi|37676581|ref|NP_936977.1| hypothetical protein VVA0921 [Vibrio vulnificus YJ016] gi|37201124|dbj|BAC96947.1| uncharacterized conserved protein [Vibrio vulnificus YJ016] Length = 162 Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats. Identities = 46/164 (28%), Positives = 77/164 (46%), Gaps = 15/164 (9%) Query: 7 KIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 K+A+F+D N+Y + K DY + ++ V+ A+ Y DP Q+ H Sbjct: 7 KVAIFVDVQNIYYTCKEKYRKHFDYNRFWQSATQDKQVVVAHAYAISSKDPGQR--QFHH 64 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125 +L + GF V K + + K DV LA+DAFE + ++ +++ SGDG F Sbjct: 65 ILRGI---GFDVKLKPFIQRWDGS----AKGDWDVGLALDAFEHAPMVDEVILLSGDGDF 117 Query: 126 TTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 LV +Q+K KKVT+ P + + L+ D ++ + Sbjct: 118 EILVERIQQKFGKKVTV----YGVPGLTAQNLQAVVDKYIPIED 157 >gi|119493449|ref|ZP_01624118.1| hypothetical protein L8106_08531 [Lyngbya sp. PCC 8106] gi|119452693|gb|EAW33872.1| hypothetical protein L8106_08531 [Lyngbya sp. PCC 8106] Length = 157 Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats. Identities = 46/163 (28%), Positives = 87/163 (53%), Gaps = 13/163 (7%) Query: 17 LYASSKALGFDIDYRKLLKAF---RSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYN 73 ++ + + G+ D R++L F +S I++ A++YT + +Q D L Sbjct: 1 MFYAQQKNGWFFDPRRVLTYFKHEQSDVILVNAFWYTGLKDPQDQ-----RGFRDALISL 55 Query: 74 GFQVVAKVAKEFTENC-GRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAAL 132 G+ V K+ KE+ ++ GR K+++D+E+ VD F + + +V+FSGDG F + L Sbjct: 56 GYTVRTKILKEYYDDSSGRYSQKANLDIEIVVDMFNTVDQYDRVVLFSGDGDFERAIELL 115 Query: 133 QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 + K +T+VST M + +LR D ++DL ++++I + Sbjct: 116 RSKNTHITVVST----EGMIARELRNATDRYIDLNDIRDQIEK 154 >gi|294139934|ref|YP_003555912.1| hypothetical protein SVI_1163 [Shewanella violacea DSS12] gi|293326403|dbj|BAJ01134.1| conserved hypothetical protein [Shewanella violacea DSS12] Length = 159 Score = 164 bits (417), Expect = 3e-39, Method: Composition-based stats. Identities = 40/165 (24%), Positives = 75/165 (45%), Gaps = 13/165 (7%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIA+F+D N+Y + + A G +YRKL + ++ A Y GD Q Sbjct: 3 NKKIAIFVDVQNIYYTCRQAYGRQFNYRKLWQHIIHEGDIVSATAYAIHKGDDGQL---- 58 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 D L + GF + K + ++ K DV +A+D E + ++ +++ SGDG Sbjct: 59 -KFQDALKHIGFDIKLKPFIQRSDGS----AKGDWDVGIAIDVMEAATEVDTIILLSGDG 113 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F L+ + +K + + V P++ + L + F+++ Sbjct: 114 DFDLLMLKV---YQKYGVDTQVYGVPALTAKSLIDASCKFIEIDE 155 >gi|15641813|ref|NP_231445.1| hypothetical protein VC1811 [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121585837|ref|ZP_01675631.1| conserved hypothetical protein [Vibrio cholerae 2740-80] gi|121727642|ref|ZP_01680745.1| conserved hypothetical protein [Vibrio cholerae V52] gi|147673789|ref|YP_001217351.1| hypothetical protein VC0395_A1407 [Vibrio cholerae O395] gi|153817839|ref|ZP_01970506.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457] gi|153821111|ref|ZP_01973778.1| conserved hypothetical protein [Vibrio cholerae B33] gi|153828564|ref|ZP_01981231.1| conserved hypothetical protein [Vibrio cholerae 623-39] gi|227081940|ref|YP_002810491.1| hypothetical protein VCM66_1734 [Vibrio cholerae M66-2] gi|229508089|ref|ZP_04397594.1| hypothetical protein VCF_003323 [Vibrio cholerae BX 330286] gi|229511672|ref|ZP_04401151.1| hypothetical protein VCE_003081 [Vibrio cholerae B33] gi|229518811|ref|ZP_04408254.1| hypothetical protein VCC_002836 [Vibrio cholerae RC9] gi|229520283|ref|ZP_04409709.1| hypothetical protein VIF_000801 [Vibrio cholerae TM 11079-80] gi|229607650|ref|YP_002878298.1| hypothetical protein VCD_002562 [Vibrio cholerae MJ-1236] gi|254285238|ref|ZP_04960203.1| conserved hypothetical protein [Vibrio cholerae AM-19226] gi|254848901|ref|ZP_05238251.1| conserved hypothetical protein [Vibrio cholerae MO10] gi|255745423|ref|ZP_05419372.1| hypothetical protein VCH_001771 [Vibrio cholera CIRS 101] gi|262147203|ref|ZP_06028007.1| hypothetical protein VIG_000056 [Vibrio cholerae INDRE 91/1] gi|262169804|ref|ZP_06037495.1| hypothetical protein VIJ_003057 [Vibrio cholerae RC27] gi|9656336|gb|AAF94959.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121549975|gb|EAX59993.1| conserved hypothetical protein [Vibrio cholerae 2740-80] gi|121630029|gb|EAX62436.1| conserved hypothetical protein [Vibrio cholerae V52] gi|126511659|gb|EAZ74253.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457] gi|126521307|gb|EAZ78530.1| conserved hypothetical protein [Vibrio cholerae B33] gi|146315672|gb|ABQ20211.1| conserved hypothetical protein [Vibrio cholerae O395] gi|148875959|gb|EDL74094.1| conserved hypothetical protein [Vibrio cholerae 623-39] gi|150424510|gb|EDN16446.1| conserved hypothetical protein [Vibrio cholerae AM-19226] gi|227009828|gb|ACP06040.1| conserved hypothetical protein [Vibrio cholerae M66-2] gi|227013710|gb|ACP09920.1| conserved hypothetical protein [Vibrio cholerae O395] gi|229342649|gb|EEO07641.1| hypothetical protein VIF_000801 [Vibrio cholerae TM 11079-80] gi|229343500|gb|EEO08475.1| hypothetical protein VCC_002836 [Vibrio cholerae RC9] gi|229351637|gb|EEO16578.1| hypothetical protein VCE_003081 [Vibrio cholerae B33] gi|229355594|gb|EEO20515.1| hypothetical protein VCF_003323 [Vibrio cholerae BX 330286] gi|229370305|gb|ACQ60728.1| hypothetical protein VCD_002562 [Vibrio cholerae MJ-1236] gi|254844606|gb|EET23020.1| conserved hypothetical protein [Vibrio cholerae MO10] gi|255737253|gb|EET92649.1| hypothetical protein VCH_001771 [Vibrio cholera CIRS 101] gi|262022038|gb|EEY40748.1| hypothetical protein VIJ_003057 [Vibrio cholerae RC27] gi|262031360|gb|EEY49970.1| hypothetical protein VIG_000056 [Vibrio cholerae INDRE 91/1] gi|327484370|gb|AEA78777.1| hypothetical protein VCLMA_A1565 [Vibrio cholerae LMA3894-4] Length = 157 Score = 164 bits (417), Expect = 4e-39, Method: Composition-based stats. Identities = 44/166 (26%), Positives = 76/166 (45%), Gaps = 15/166 (9%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 EKIA+ +D N+Y + + G DY + V++A Y DP+Q+ Sbjct: 1 MEKIAILVDVQNVYYTCREQYGRHFDYNQFWSQVTQNRTVVKANAYAIASKDPQQR--QF 58 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 H +L + GF+V+ K + ++ K DV +A+D +E ++ ++ +V+ SGDG Sbjct: 59 HHILRGI---GFEVMLKPFIQRSDGS----AKGDWDVGIALDGYELAQEVDTVVLVSGDG 111 Query: 124 CFTTLVAAL-QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F LV + QR KV + P + + L A F + + Sbjct: 112 DFEPLVTRIAQRFQVKVEV----YGVPKLTAQHLIDVASQFHPIEH 153 >gi|212634169|ref|YP_002310694.1| hypothetical protein swp_1319 [Shewanella piezotolerans WP3] gi|212555653|gb|ACJ28107.1| Conserved hypothetical protein [Shewanella piezotolerans WP3] Length = 157 Score = 164 bits (417), Expect = 4e-39, Method: Composition-based stats. Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 13/165 (7%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIALF+D N+Y + + A G +YRKL + + A Y GD Q Sbjct: 1 MKKIALFVDVQNIYYTCRQAYGRQFNYRKLWQHLGYEGEITSATAYAIHRGDDGQL---- 56 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 D L + GF V K + ++ K DV + +D E + ++ +++ SGDG Sbjct: 57 -KFQDALKHIGFDVKLKPFIQRSDGS----AKGDWDVGITIDIMEAASEVDCVILLSGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F L+ + +K + + V P + + L A + ++ Sbjct: 112 DFDLLMLKI---YQKYGVETQVYGVPGLTAKSLIDSASQYHEIDD 153 >gi|109898030|ref|YP_661285.1| hypothetical protein Patl_1710 [Pseudoalteromonas atlantica T6c] gi|109700311|gb|ABG40231.1| protein of unknown function DUF88 [Pseudoalteromonas atlantica T6c] Length = 158 Score = 164 bits (417), Expect = 4e-39, Method: Composition-based stats. Identities = 37/162 (22%), Positives = 76/162 (46%), Gaps = 13/162 (8%) Query: 7 KIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 +IA+F+D N+Y +++ +YR+ + + ++ A Y T D +Q Sbjct: 4 RIAVFVDVQNIYYTTRDTYQKQFNYRQFWQHLSEQGDIVIANAYATERHDSQQ-----QK 58 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125 L + GF V K + ++ K DV + +D + ++ ++ +V+ SGDG F Sbjct: 59 FQSALKHIGFNVKLKPFIQRSDGS----AKGDWDVGITIDVLDAAQQVDTVVLLSGDGDF 114 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 L+ A++ KK + + V P++ ++ L D F+++ Sbjct: 115 DLLLKAVK---KKHEVKTKVYGVPALTANALVSACDEFVEIT 153 >gi|91791739|ref|YP_561390.1| hypothetical protein Sden_0372 [Shewanella denitrificans OS217] gi|91713741|gb|ABE53667.1| protein of unknown function DUF88 [Shewanella denitrificans OS217] Length = 184 Score = 164 bits (415), Expect = 6e-39, Method: Composition-based stats. Identities = 43/163 (26%), Positives = 73/163 (44%), Gaps = 13/163 (7%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 +KIALF+D N+Y + + A G +YRKL + + +++A Y GD Q Sbjct: 29 KKIALFVDVQNIYYTCREAYGRQFNYRKLWQLVSQQGEIVQAVAYAIHKGDDGQL----- 83 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 D L + GF+V K + + K DV + +D E + + +++ SGDG Sbjct: 84 KFQDALKHIGFEVKLKPFIQRADGS----AKGDWDVGITIDVMEAAADVNTVILLSGDGD 139 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F L+ + +K + + V PS+ + L A F + Sbjct: 140 FDRLLVKI---YQKHGVDTQVYGVPSLTAKSLMDSAGQFHPID 179 >gi|218295249|ref|ZP_03496085.1| protein of unknown function DUF88 [Thermus aquaticus Y51MC23] gi|218244452|gb|EED10977.1| protein of unknown function DUF88 [Thermus aquaticus Y51MC23] Length = 180 Score = 164 bits (415), Expect = 6e-39, Method: Composition-based stats. Identities = 45/175 (25%), Positives = 87/175 (49%), Gaps = 17/175 (9%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 +IALFIDG+ +Y ++K LG+++D+R+++ F + + A+YY + +++ Sbjct: 2 RIALFIDGSYMYQAAKRLGWNVDHRRVITQFATPEQLYNAFYYVPITDPEDER---QQRF 58 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126 +D L + G+ V +++ + G R ++ M A D + + V+ SG G Sbjct: 59 IDALVFMGYTVRSRLVR------GEARFEAMM----ATDLLTTAPRWDRAVVASGSGELA 108 Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 AL+ K+V ++ +A +LR QAD F++LA + + R P + Sbjct: 109 HAFQALRAMGKEVHLL----GVHELADLELRNQADRFLNLAEWREVLERTPGGRR 159 >gi|110834666|ref|YP_693525.1| hypothetical protein ABO_1805 [Alcanivorax borkumensis SK2] gi|110647777|emb|CAL17253.1| conserved hypothetical protein [Alcanivorax borkumensis SK2] Length = 160 Score = 164 bits (415), Expect = 7e-39, Method: Composition-based stats. Identities = 42/169 (24%), Positives = 72/169 (42%), Gaps = 15/169 (8%) Query: 1 MFDPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59 M+ P +IA+F D N+Y +++ A G +YR L + ++ ++ A Y T GD Q Sbjct: 1 MYMP--RIAVFADVQNIYYTTRQAFGRPFNYRALWQLLSAQGEIVHALAYATHRGDDGQT 58 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIF 119 D L + GF V K + ++ K DV +AVD + ++ +V+ Sbjct: 59 -----KFQDALKHIGFTVKLKPYIQRSDGS----SKGDWDVGIAVDVMTLAPEVDTVVLL 109 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 SGDG F L+ + + + V + + L A F + Sbjct: 110 SGDGDFDVLLTRV---GANPGVRTEVYGVEPLTARSLIDSASVFHPIGD 155 >gi|229523840|ref|ZP_04413245.1| hypothetical protein VCA_001419 [Vibrio cholerae bv. albensis VL426] gi|229337421|gb|EEO02438.1| hypothetical protein VCA_001419 [Vibrio cholerae bv. albensis VL426] Length = 157 Score = 163 bits (414), Expect = 7e-39, Method: Composition-based stats. Identities = 43/166 (25%), Positives = 75/166 (45%), Gaps = 15/166 (9%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 EKIA+ +D N+Y + + G DY + V++A Y P+Q+ Sbjct: 1 MEKIAILVDVQNVYYTCREQYGRHFDYNQFWSQVTQNRTVVKANAYAIASKAPQQR--QF 58 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 H +L + GF+V+ K + ++ K DV +A+D +E ++ ++ +V+ SGDG Sbjct: 59 HHILRGI---GFEVMLKPFIQRSDGS----AKGDWDVGIALDGYELAQEVDTVVLVSGDG 111 Query: 124 CFTTLVAAL-QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F LV + QR KV + P + + L A F + + Sbjct: 112 DFEPLVTRIAQRFQVKVEV----YGVPKLTAQHLIDVASQFHPIEH 153 >gi|317970442|ref|ZP_07971832.1| hypothetical protein SCB02_12967 [Synechococcus sp. CB0205] Length = 168 Score = 163 bits (414), Expect = 7e-39, Method: Composition-based stats. Identities = 47/172 (27%), Positives = 87/172 (50%), Gaps = 12/172 (6%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFR--SRAIVIRAYYYTTVVGDPEQQFSPLHP 65 +AL +DG +++ + LG+ D R+LL+ S + A++YT + +Q P Sbjct: 3 LALAVDGHSMFYVQQKLGWFFDPRRLLEYATAQSGVELGSAFWYTGLKDATDQ-----RP 57 Query: 66 LLDWLHYNGFQVVAKVAKEFT-ENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 D L GF V K +E ++ R+ ++++DVE+A+D + ++ + + SG Sbjct: 58 FRDALTSLGFTVRTKPLREVGHDSDQRQFARANLDVEIAIDLMAVAHRIDEVWVMSGSRD 117 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 L+ L+ + KV ++ST M +LR AD F+DL+ LK ++ + Sbjct: 118 LERLLEVLRIRGLKVVLMST----EGMVPRELRNAADRFVDLSSLKPQLEKT 165 >gi|261211879|ref|ZP_05926166.1| hypothetical protein VCJ_002142 [Vibrio sp. RC341] gi|260839229|gb|EEX65861.1| hypothetical protein VCJ_002142 [Vibrio sp. RC341] Length = 157 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 44/166 (26%), Positives = 75/166 (45%), Gaps = 15/166 (9%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 EKIA+ +D N+Y + + G DY + V++A Y DP+Q+ Sbjct: 1 MEKIAILVDVQNVYYTCRERYGRHFDYNQFWSQATQGRAVVKANAYAIASKDPQQR--QF 58 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 H +L + GF+V+ K + ++ K DV +A+D +E ++ + +V+ SGDG Sbjct: 59 HHILRGI---GFEVMLKPFIQRSDGS----AKGDWDVGIALDGYELAQEVNTVVLVSGDG 111 Query: 124 CFTTLVAAL-QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F LV + QR KV + P + + L A F + + Sbjct: 112 DFEPLVTRIAQRFQVKVEV----YGVPKLTAQHLIDVASQFHPIEH 153 >gi|318040287|ref|ZP_07972243.1| hypothetical protein SCB01_01212 [Synechococcus sp. CB0101] Length = 175 Score = 162 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 50/176 (28%), Positives = 85/176 (48%), Gaps = 12/176 (6%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRS--RAIVIRAYYYTTVVGDPEQQFSPLHP 65 +AL +DG +++ + LG+ D R+LL + + A++YT + +Q P Sbjct: 3 LALAVDGHSMFYVQQKLGWFFDPRRLLAYATATPGVEISSAFWYTGLKDPTDQ-----RP 57 Query: 66 LLDWLHYNGFQVVAKVAKEFT-ENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 D L GF V K +E E R+ ++++DVE+A+D + + + + SG Sbjct: 58 FRDALTSLGFTVRTKPLREVGGEADQRQFARANLDVEVAIDLLAVAHRTDEVWLLSGSRD 117 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 LV L+ K KV +VST M +LR AD F+DLA L+ ++ + + Sbjct: 118 LERLVEVLRIKGLKVVLVST----DGMVPRELRNAADRFLDLAELRPQLEKTEHQQ 169 >gi|229529164|ref|ZP_04418554.1| hypothetical protein VCG_002257 [Vibrio cholerae 12129(1)] gi|229332938|gb|EEN98424.1| hypothetical protein VCG_002257 [Vibrio cholerae 12129(1)] Length = 157 Score = 162 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 43/166 (25%), Positives = 75/166 (45%), Gaps = 15/166 (9%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 EKIA+ +D N+Y + + G DY + V++A Y P+Q+ Sbjct: 1 MEKIAILVDVQNVYYTCREQYGRHFDYNQFWSQVTQNRTVVKANAYAIASKAPQQR--QF 58 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 H +L + GF+V+ K + ++ K DV +A+D +E ++ ++ +V+ SGDG Sbjct: 59 HHILRGI---GFEVMLKPFIQRSDGS----AKGDWDVGIALDGYELAQEVDTVVLVSGDG 111 Query: 124 CFTTLVAAL-QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F LV + QR KV + P + + L A F + + Sbjct: 112 DFEPLVTRIAQRFQVKVEV----YGVPKLTAQHLIDVASQFHPIEH 153 >gi|225851407|ref|YP_002731641.1| hypothetical protein PERMA_1879 [Persephonella marina EX-H1] gi|225645689|gb|ACO03875.1| conserved hypothetical protein [Persephonella marina EX-H1] Length = 224 Score = 162 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 48/191 (25%), Positives = 85/191 (44%), Gaps = 24/191 (12%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTT-----VVGDPE 57 P EK+A+FIDG N++ + + I+Y+KL+ R ++RAY+YT + D Sbjct: 18 YPNEKVAIFIDGGNMFHACNYMQIKINYKKLIDILRKDRWLLRAYFYTGIPSGDLPRDVR 77 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEH 115 +Q L+ L G +V K+ E ++ +D+ LA D + + Sbjct: 78 EQLRKQQGFLNELQNLGIKVKTMPLKKTPEG----YIEKGIDILLATDMVSLAFRNAYDT 133 Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK----- 170 ++ SGD + +V +Q K+V S + +S +LR+ D F+ L +K Sbjct: 134 AILVSGDSDYVPVVKEIQELGKRVENASFKRT----SSYELRKVCDEFILLDNIKHRFTT 189 Query: 171 ----NEIARDP 177 +I + P Sbjct: 190 PLYPEKIEKPP 200 >gi|153826226|ref|ZP_01978893.1| conserved hypothetical protein [Vibrio cholerae MZO-2] gi|149739991|gb|EDM54166.1| conserved hypothetical protein [Vibrio cholerae MZO-2] Length = 157 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 15/166 (9%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 EKIA+ +D N+Y + + G +Y + V++A Y DP+Q+ Sbjct: 1 MEKIAILVDVQNVYYTCREQYGRHFEYNQFWSQVTQNRTVVKANAYAIASKDPQQR--QF 58 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 H +L + GF+V+ K + ++ K DV +A+D +E ++ ++ +V+ SGDG Sbjct: 59 HHILRGI---GFEVMLKPFIQRSDGS----AKGDWDVGIALDGYELAQEVDTVVLVSGDG 111 Query: 124 CFTTLVAAL-QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F LV + QR KV + P + + L A F + + Sbjct: 112 DFEPLVTRIAQRFQVKVEV----YGVPKLTAQHLIDVASQFHPIEH 153 >gi|24374996|ref|NP_719039.1| hypothetical protein SO_3490 [Shewanella oneidensis MR-1] gi|24349728|gb|AAN56483.1|AE015785_6 conserved hypothetical protein [Shewanella oneidensis MR-1] Length = 157 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 38/166 (22%), Positives = 72/166 (43%), Gaps = 13/166 (7%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 KIALF+D N+Y + + A +YRKL + ++ ++ A Y GD Q Sbjct: 1 MNKIALFVDVQNIYYTCREAYQRQFNYRKLWQHLSTQGEIVSAVAYAIHRGDDGQL---- 56 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 D L + GF++ K + ++ K DV + +D + + ++ +++ SGDG Sbjct: 57 -KFQDALRHIGFELKLKPFIQRSDGS----AKGDWDVGITIDVLDAAPNVDTVILLSGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 F L+ + +K + + V P + + L F + + Sbjct: 112 DFAILLEKITQK---YGVKAEVYGVPQLTAKALMDATTQFNPIDDV 154 >gi|119946864|ref|YP_944544.1| hypothetical protein Ping_3258 [Psychromonas ingrahamii 37] gi|119865468|gb|ABM04945.1| hypothetical protein DUF88 [Psychromonas ingrahamii 37] Length = 157 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 41/165 (24%), Positives = 70/165 (42%), Gaps = 15/165 (9%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 KIA+F D N+Y +++ A G +YRKL + + ++ AY Y GD +Q Sbjct: 1 MNKIAVFADVQNIYYTTRQAYGKQFNYRKLWQQLEQQGDIVSAYAYAIERGDNQQ----- 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 D L + GF+V K + ++ K DV + +D E + ++ +++ SGDG Sbjct: 56 KKFQDVLTHLGFEVKLKPFIQRSDGT----AKGDWDVGITIDIMETAPQVDTIILLSGDG 111 Query: 124 CFTTLVAAL-QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F L + Q K P + + L + F + Sbjct: 112 DFAILFDKVKQAYGVKTE----AYGVPKLTAKALIDASTVFHPIE 152 >gi|157374400|ref|YP_001473000.1| hypothetical protein Ssed_1261 [Shewanella sediminis HAW-EB3] gi|157316774|gb|ABV35872.1| protein of unknown function DUF88 [Shewanella sediminis HAW-EB3] Length = 159 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 41/164 (25%), Positives = 72/164 (43%), Gaps = 13/164 (7%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 +KIA+F+D N+Y + + A G +YRKL + + A Y GD Q Sbjct: 4 KKIAIFVDVQNIYYTCRQAYGRQFNYRKLWQHINHEGEISSATAYAIHRGDDGQL----- 58 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 D L + GF V K + ++ K DV + +D E + ++ +++ SGDG Sbjct: 59 KFQDALKHIGFDVKLKPFIQRSDGS----AKGDWDVGITIDIMEAASEVDSIILLSGDGD 114 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F L+ + +K I + V P++ + L A + ++ Sbjct: 115 FGLLMLKIHQK---YGIDTQVYGVPTLTAKSLIDSACQYHEIDD 155 >gi|322369896|ref|ZP_08044458.1| hypothetical protein ZOD2009_10415 [Haladaptatus paucihalophilus DX253] gi|320550232|gb|EFW91884.1| hypothetical protein ZOD2009_10415 [Haladaptatus paucihalophilus DX253] Length = 165 Score = 161 bits (409), Expect = 3e-38, Method: Composition-based stats. Identities = 41/170 (24%), Positives = 73/170 (42%), Gaps = 14/170 (8%) Query: 3 DPREKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 P +++ + D NLY ++++ +IDY LL + RA Y P++ Sbjct: 5 HPGQRVTVLADAQNLYHTAQSVYSRNIDYSSLLSKAAQDRELTRAIAYVIQADSPDED-- 62 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 D L GF+ K K F G K+ DV + +DA + ++ +V+ +G Sbjct: 63 ---RFFDALTDIGFEAKIKAIKTF----GDGSKKADWDVGICLDAITLAPKVDTVVLCTG 115 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 DG F L L+ + +V ++ +++L AD F+DL+ Sbjct: 116 DGDFAQLATHLRHEGVRVEVMGF----QESTAEELIAAADSFIDLSERTE 161 >gi|221633438|ref|YP_002522663.1| hypothetical protein trd_1460 [Thermomicrobium roseum DSM 5159] gi|221157206|gb|ACM06333.1| Protein of unknown function superfamily [Thermomicrobium roseum DSM 5159] Length = 198 Score = 161 bits (409), Expect = 3e-38, Method: Composition-based stats. Identities = 52/162 (32%), Positives = 90/162 (55%), Gaps = 12/162 (7%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 +++A+F D +NLY ++ LG IDY +LL+ + ++ AY Y T+ G+ S P Sbjct: 8 DRVAVFFDMSNLYFVARDLGVRIDYARLLEFLVAGRRLVCAYAYVTLAGEE----SSAVP 63 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125 L WL NGF+VV + + ++ ++ +D+E+AVD Q+ ++ +V+ +GDG + Sbjct: 64 FLTWLRRNGFRVVTRTLRRGSDGA----LRGDLDLEMAVDVLLQTPHVDVIVLVTGDGEY 119 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 LV +QR ++V I S P + +L ADY++DL Sbjct: 120 CYLVETVQRLGRRVEIAS----APRNTAVELMELADYYVDLE 157 >gi|225848799|ref|YP_002728963.1| RtsE [Sulfurihydrogenibium azorense Az-Fu1] gi|225644319|gb|ACN99369.1| RtsE [Sulfurihydrogenibium azorense Az-Fu1] Length = 174 Score = 161 bits (408), Expect = 4e-38, Method: Composition-based stats. Identities = 46/176 (26%), Positives = 83/176 (47%), Gaps = 14/176 (7%) Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 +++A+F+D NLY S++ +++ +L+ I++RA+ Y + +Q Sbjct: 6 YNNQRVAVFVDIQNLYYSARDTFNRKVNFESILQKTVGDRILVRAFAYIVKLHGVDQ--- 62 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFT----ENCGRKRVKSSMDVELAVDAFEQSEGLEHLV 117 ++ L + G+QV K K F E +K+ D+ +A+DA ++ ++ V Sbjct: 63 --KGFINTLKHIGYQVREKEPKIFKRLDEEGNLWTTIKADWDMGIAIDAISLADKIDVAV 120 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 + +GDG F LV LQ K KV I + + +L AD F+DL +I Sbjct: 121 LTTGDGDFKDLVKYLQTKGVKVEIAAF----KQTTAKELIEAADEFIDLNIYGEDI 172 >gi|254424011|ref|ZP_05037729.1| conserved hypothetical protein [Synechococcus sp. PCC 7335] gi|196191500|gb|EDX86464.1| conserved hypothetical protein [Synechococcus sp. PCC 7335] Length = 157 Score = 161 bits (407), Expect = 5e-38, Method: Composition-based stats. Identities = 43/163 (26%), Positives = 83/163 (50%), Gaps = 13/163 (7%) Query: 17 LYASSKALGFDIDYRKLLKAFRS---RAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYN 73 ++ + + G+ D +++L+ F ++ A++YT + +Q D L Sbjct: 1 MFYAQQKNGWFFDPKRVLEYFLKEIEGNVLGNAFWYTGLKDPQDQ-----RAFRDALISL 55 Query: 74 GFQVVAKVAKEFTEN-CGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAAL 132 G+ V K+ KE+ ++ GR K+++D+E+ VD F + + +V+FSGDG F + L Sbjct: 56 GYTVRTKILKEYYDDASGRYSQKANLDIEIVVDMFNTVDQYDRVVLFSGDGDFERAIELL 115 Query: 133 QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 + K +T+VST M + +LR D ++DL ++ I + Sbjct: 116 RSKSTHITVVST----EGMIARELRNVTDRYIDLNSIRRRIEK 154 >gi|153832763|ref|ZP_01985430.1| protein of unknown function [Vibrio harveyi HY01] gi|156976905|ref|YP_001447811.1| hypothetical protein VIBHAR_05689 [Vibrio harveyi ATCC BAA-1116] gi|148870897|gb|EDL69787.1| protein of unknown function [Vibrio harveyi HY01] gi|156528499|gb|ABU73584.1| hypothetical protein VIBHAR_05689 [Vibrio harveyi ATCC BAA-1116] Length = 162 Score = 161 bits (407), Expect = 5e-38, Method: Composition-based stats. Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 13/167 (7%) Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 + ++KIA+ +D N+Y + + A + DY + V+ A Y DP+Q Sbjct: 4 ESKQKIAILVDVQNVYYTCREAYRSNFDYNQFWYVATQGKEVVSARAYAIASNDPKQ--- 60 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 L GF+V+ K + + K DV + +DA E + ++ +++ SG Sbjct: 61 --RQFHHILRGVGFEVMLKPYIQRRDGS----AKGDWDVGITLDAIEIAPEVDEVILVSG 114 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 DG F+ LV +Q++ K TV P + S L AD F+ + Sbjct: 115 DGDFSLLVERIQQRFNK---KVTVYGVPKLTSQTLIDCADNFVAVDE 158 >gi|15605762|ref|NP_213139.1| hypothetical protein aq_200 [Aquifex aeolicus VF5] gi|2982933|gb|AAC06550.1| hypothetical protein aq_200 [Aquifex aeolicus VF5] Length = 208 Score = 161 bits (407), Expect = 6e-38, Method: Composition-based stats. Identities = 45/179 (25%), Positives = 80/179 (44%), Gaps = 17/179 (9%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE------- 57 E++ +FIDG+NL+ + L +DY KL++ R ++RAY+YT V + + Sbjct: 2 NERLMIFIDGSNLFHGIRYLNIKVDYSKLVEFLREGRYLVRAYFYTAVPQEKDIKKGTPE 61 Query: 58 -QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLE 114 LD L + G +V ++ + ++ +D+ LA D + + Sbjct: 62 WDSLQRQKRFLDELSFMGIKVKTAHLRKLPSG---EYLEKEVDIMLATDMLSLAYRNAYD 118 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 V+ SGD F V A+Q K+V + + +S LR+ D F+ L ++I Sbjct: 119 TAVLVSGDSDFIHTVEAVQSLGKRVENATFKKT----SSYNLRKVCDRFILLDDHLDKI 173 >gi|254432040|ref|ZP_05045743.1| DUF88 [Cyanobium sp. PCC 7001] gi|197626493|gb|EDY39052.1| DUF88 [Cyanobium sp. PCC 7001] Length = 219 Score = 161 bits (407), Expect = 6e-38, Method: Composition-based stats. Identities = 47/204 (23%), Positives = 89/204 (43%), Gaps = 39/204 (19%) Query: 2 FDPREK-IALFIDGANLYASSKALGFDIDYRKLLKAFRSRA--IVIRAYYYTTVVGDPEQ 58 F PR + + + +DG +++ + + LG+ D R+LL+ S+ + A++Y + +Q Sbjct: 13 FQPRPRQLVVAVDGHSMFYAQQKLGWFFDPRRLLRHASSQPGLELAGAFWYAGLKDPSDQ 72 Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFT---------------------------ENCGR 91 P D L GF V + +E R Sbjct: 73 -----RPFRDALTSLGFTVRTRPLRELAPPASNGSTQAADGEHRHPEPPRPTDQRPADQR 127 Query: 92 KRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSM 151 V++++DVE+AVD + + + + SG LV L+ + ++T+++T M Sbjct: 128 HFVRANLDVEVAVDLMMVAPRTDEVWLLSGSRDLDRLVEVLRAQGVRITLMTT----EGM 183 Query: 152 ASDQLRRQADYFMDLAYLKNEIAR 175 + +LR AD F+DLA L+ + + Sbjct: 184 VARELRNAADGFVDLASLRPVLEK 207 >gi|269967719|ref|ZP_06181767.1| hypothetical protein VMC_31970 [Vibrio alginolyticus 40B] gi|269827625|gb|EEZ81911.1| hypothetical protein VMC_31970 [Vibrio alginolyticus 40B] Length = 162 Score = 161 bits (407), Expect = 6e-38, Method: Composition-based stats. Identities = 44/167 (26%), Positives = 74/167 (44%), Gaps = 13/167 (7%) Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 + ++KIA+ +D N+Y + + A + DY + V+ A Y DP+Q Sbjct: 4 ESKQKIAILVDVQNVYYTCREAYRSNFDYNQFWYVATQGKEVVSARAYAIASNDPKQ--- 60 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 L GF+V+ K + + K DV + +DA E + +E +++ SG Sbjct: 61 --RQFHHILRGVGFEVMLKPYIQRRDGS----SKGDWDVGITLDAIEIAPEVEEVILVSG 114 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 DG F+ LV +Q++ K TV P + S L AD F+ + Sbjct: 115 DGDFSLLVERIQQRFNKTV---TVYGVPKLTSQTLIDCADNFVAIDD 158 >gi|149911940|ref|ZP_01900538.1| hypothetical protein PE36_11027 [Moritella sp. PE36] gi|149804987|gb|EDM65016.1| hypothetical protein PE36_11027 [Moritella sp. PE36] Length = 157 Score = 160 bits (406), Expect = 6e-38, Method: Composition-based stats. Identities = 42/160 (26%), Positives = 76/160 (47%), Gaps = 13/160 (8%) Query: 5 REKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIA+F+D N+Y +++ G +YRKL + + V+ AY Y GD +Q Sbjct: 1 MQKIAVFVDVQNIYYTTRQTYGRQFNYRKLWQHLLLQGDVVTAYAYAIDKGDDQQ----- 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 D L + GF V K + ++ K DV + +D + +E ++ +V+ SGDG Sbjct: 56 RKFQDALKHIGFDVKLKPFIQRSDGS----AKGDWDVGITIDVLQVAESVDTVVLLSGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163 F L+ ++ + + + V P++ ++ L A F Sbjct: 112 DFAILLDTIKA---RHQVRAEVYGVPALTANALINSATVF 148 >gi|170725723|ref|YP_001759749.1| hypothetical protein Swoo_1362 [Shewanella woodyi ATCC 51908] gi|169811070|gb|ACA85654.1| protein of unknown function DUF88 [Shewanella woodyi ATCC 51908] Length = 157 Score = 160 bits (406), Expect = 7e-38, Method: Composition-based stats. Identities = 42/165 (25%), Positives = 71/165 (43%), Gaps = 13/165 (7%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIALF+D N+Y + + A G +YRKL + ++ A Y GD Q Sbjct: 1 MKKIALFVDVQNIYYTCRQAHGRQFNYRKLWQHISHEGEIVSATAYAIHKGDDGQL---- 56 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 D L + GF V K + + K DV + +D E + ++ +++ SGDG Sbjct: 57 -KFQDALKHIGFDVKLKPFIQRADGS----AKGDWDVGITIDIMEAASEVDSIILLSGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F L+ + +K I + V P + + L A + ++ Sbjct: 112 DFDLLMLKI---YQKYGIETQVYGVPGLTAKSLIDSAAKYHEIDD 153 >gi|15806586|ref|NP_295301.1| hypothetical protein DR_1578 [Deinococcus radiodurans R1] gi|6459341|gb|AAF11139.1|AE002001_5 conserved hypothetical protein [Deinococcus radiodurans R1] Length = 185 Score = 160 bits (405), Expect = 8e-38, Method: Composition-based stats. Identities = 40/172 (23%), Positives = 78/172 (45%), Gaps = 10/172 (5%) Query: 4 PREKIALFIDGANLYASSKAL-GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 R ++ +FID NLY S++ L +++ +L+ ++ A YT + + Sbjct: 6 HRPRVGVFIDTQNLYHSARDLLERTVNFETILQVATEGRELVHAISYTV----EREGEAT 61 Query: 63 LHPLLDWLHYNGFQVV-AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 P + L GF+V + + G+ + + D+ + D F + L+ +V+ SG Sbjct: 62 SRPFIYKLSTLGFKVRRMNLTLHHVTDGGKPIYEGNWDMGIVADMFRLMDHLDVIVLGSG 121 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 DG FT +V LQ + K+V +++ + +L AD F L ++ + Sbjct: 122 DGDFTDIVEVLQERGKRVEVIAF----REHTAQKLIDAADRFTHLPDIEEGL 169 >gi|222479108|ref|YP_002565345.1| protein of unknown function DUF88 [Halorubrum lacusprofundi ATCC 49239] gi|222452010|gb|ACM56275.1| protein of unknown function DUF88 [Halorubrum lacusprofundi ATCC 49239] Length = 165 Score = 160 bits (405), Expect = 8e-38, Method: Composition-based stats. Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 14/167 (8%) Query: 3 DPREKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 P +++A+ D NLY S+++ +IDY LL+ + ++RA Y PE++ Sbjct: 5 HPDQRVAVLADSQNLYHSAQSVYSRNIDYSGLLEEAVNDRSLVRAIAYVIRADSPEEE-- 62 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 + L GF+ K K F + K+ D+ +++DA + ++ +VI +G Sbjct: 63 ---SFFEALRDIGFETKIKEIKTFADGS----KKADWDLGMSLDAVSLASHVDTVVICTG 115 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 DG F L + L+ + +V + S A+D+L AD F+DLA Sbjct: 116 DGDFARLCSHLRHEGVRVEAMGFGNS----AADELIDAADDFVDLAE 158 >gi|291295060|ref|YP_003506458.1| hypothetical protein Mrub_0671 [Meiothermus ruber DSM 1279] gi|290470019|gb|ADD27438.1| protein of unknown function DUF88 [Meiothermus ruber DSM 1279] Length = 192 Score = 160 bits (405), Expect = 9e-38, Method: Composition-based stats. Identities = 42/184 (22%), Positives = 86/184 (46%), Gaps = 14/184 (7%) Query: 2 FDPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 + P++++ LF+D NLY S++ G ++++ L++ + ++RA Y + Sbjct: 11 WSPQQRVGLFVDTQNLYHSARDYYGQNVNFESLMRYAVANRQLVRATAYVV----EREHD 66 Query: 61 SPLHPLLDWLHYNGFQVVAK--VAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVI 118 + P + L GF+V KE T+ G+ + + D+ +A D L+ +V+ Sbjct: 67 TSAWPFIYKLSTIGFRVRRMNLTLKETTDE-GKPIYEGNWDMGIAADMVRLMHTLDVVVL 125 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178 SGDG F +V L + +V +++ S +L D F+ L ++N P Sbjct: 126 GSGDGDFVDIVEVLMERGIRVEVIAF----KETTSQKLIDAVDRFIHLPEIENAF--VPS 179 Query: 179 EDKK 182 ++++ Sbjct: 180 KERE 183 >gi|237755695|ref|ZP_04584304.1| RtsE [Sulfurihydrogenibium yellowstonense SS-5] gi|237692145|gb|EEP61144.1| RtsE [Sulfurihydrogenibium yellowstonense SS-5] Length = 174 Score = 160 bits (405), Expect = 9e-38, Method: Composition-based stats. Identities = 47/176 (26%), Positives = 82/176 (46%), Gaps = 14/176 (7%) Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 +++A+F+D NLY S++ +++ +L I++RA+ Y + +Q Sbjct: 6 YNNQRVAIFVDIQNLYYSARDTFNRKVNFESILYKTLGDRILVRAFAYIVKLQGVDQ--- 62 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFT----ENCGRKRVKSSMDVELAVDAFEQSEGLEHLV 117 ++ L + G+QV K K F E +K+ D+ +A+DA SE ++ + Sbjct: 63 --KGFINTLKHIGYQVREKEPKIFKRLDEEGNLWTTIKADWDMGIAIDAIALSEKIDVAI 120 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 + +GDG F LV LQ K KV I + + +L AD F+DL +I Sbjct: 121 LTTGDGDFKDLVKYLQTKGVKVEIAAF----KQTTAKELIEVADEFIDLTTFGEDI 172 >gi|119356319|ref|YP_910963.1| hypothetical protein Cpha266_0482 [Chlorobium phaeobacteroides DSM 266] gi|119353668|gb|ABL64539.1| protein of unknown function DUF88 [Chlorobium phaeobacteroides DSM 266] Length = 287 Score = 159 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 52/172 (30%), Positives = 90/172 (52%), Gaps = 9/172 (5%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 ++ A++IDGANL+ + ++LG+ ID+ +L+ F R + A YY V ++ + Sbjct: 4 KRAAVYIDGANLFFTQRSLGWQIDFSRLITFFLDRYASVEARYYVPVSEPASEEQAA--- 60 Query: 66 LLDWLHYNGFQVVAKVAKE-FTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 L +G+ + +K K+ + G +K ++DVELAVDA + ++FSGD Sbjct: 61 FTRVLAAHGYILTSKPVKKIVNKTTGEIIIKGNLDVELAVDALVGEIAYDTFILFSGDSD 120 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQ-LRRQADYFMDLAYLKNEIAR 175 F L+ AL+ K K+V + ST +++ + L F DLA L++ I Sbjct: 121 FLPLLRALKEKGKEVLVYST----EGISAWELLIEPGIDFHDLAGLRDRIGH 168 >gi|91224643|ref|ZP_01259904.1| hypothetical protein V12G01_07878 [Vibrio alginolyticus 12G01] gi|91190531|gb|EAS76799.1| hypothetical protein V12G01_07878 [Vibrio alginolyticus 12G01] Length = 162 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 13/167 (7%) Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 + ++KIA+ +D N+Y + + A + DY + V+ A Y DP+Q Sbjct: 4 ESKQKIAILVDVQNVYYTCREAYRSNFDYNQFWYVATQGKEVVSARAYAIASNDPKQ--- 60 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 L GF+V+ K + + K DV + +DA E + +E +++ SG Sbjct: 61 --RQFHHILRGVGFEVMLKPYIQRRDGS----SKGDWDVGITLDAIEIAPEVEEVILVSG 114 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 DG F+ LV +Q++ TV P + S L AD F+ + Sbjct: 115 DGDFSLLVERIQQRFNNTV---TVYGVPKLTSQTLIDCADNFVAIDD 158 >gi|194333277|ref|YP_002015137.1| hypothetical protein Paes_0433 [Prosthecochloris aestuarii DSM 271] gi|194311095|gb|ACF45490.1| protein of unknown function DUF88 [Prosthecochloris aestuarii DSM 271] Length = 294 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 45/175 (25%), Positives = 83/175 (47%), Gaps = 15/175 (8%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 K +FIDGANL+ + + +G+ ID+ +L+ F + A YY G Q+ Sbjct: 6 NRKAGVFIDGANLFFTQRHMGWQIDFSRLIAFFMQCFDSVEARYYVPESGALSQEQVA-- 63 Query: 65 PLLDWLHYNGFQVVAKVAKE-FTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L NG+ + +K K+ + G +K ++DVEL VDA + + ++ SGD Sbjct: 64 -FNRMLEANGYTITSKPVKKIVNKETGEVVMKGNLDVELVVDALTTASRYDSFILVSGDS 122 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQ----ADYFMDLAYLKNEIA 174 F L+ AL+ + K + + ST +++ +L + D + ++++I Sbjct: 123 DFLPLIRALRSRGKDIQVYST----RGLSAWELVAEPGIGC---HDFSDIRSKIE 170 >gi|269962746|ref|ZP_06177088.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269832501|gb|EEZ86618.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 163 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 13/167 (7%) Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 ++KIA+ +D N+Y + + A + DY + V+ A Y DP+Q Sbjct: 5 SNKQKIAILVDVQNVYYTCREAYRSNFDYNQFWYVATQGKEVVSARAYAIASNDPKQ--- 61 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 L GF+V+ K + + K DV + +DA E + ++ +++ SG Sbjct: 62 --RQFHHILRGVGFEVMLKPYIQRRDGS----AKGDWDVGITLDAIEIAPEVDEVILVSG 115 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 DG F+ LV +Q++ K TV P + S L AD+F+ + Sbjct: 116 DGDFSLLVERIQQRFNK---KVTVYGVPRLTSQTLIDCADHFVAVDD 159 >gi|297567250|ref|YP_003686222.1| hypothetical protein Mesil_2873 [Meiothermus silvanus DSM 9946] gi|296851699|gb|ADH64714.1| protein of unknown function DUF88 [Meiothermus silvanus DSM 9946] Length = 213 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 43/170 (25%), Positives = 84/170 (49%), Gaps = 17/170 (10%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 +IALFIDG+ +Y ++K LG+++D+R+++ F + + A+YY + +++ Sbjct: 6 RIALFIDGSYMYNAAKRLGWNVDHRRVIGQFATPEELYNAFYYAPITDSEDER---QQKF 62 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126 LD L + G+ V ++ + G R ++ +A D + + V+ SG G Sbjct: 63 LDALVFMGYTVRSREVR------GEPRFEA----LIATDMLITAPRWDRAVVASGAGELA 112 Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 + AL+ + K++ +V + LR QAD F+DL ++ + R Sbjct: 113 HALGALRAQGKELYLVGVA----ELTDLWLRNQADRFLDLRDMREGLERQ 158 >gi|662866|emb|CAA87004.1| orf1 [Nostoc sp. PCC 7120] Length = 157 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 45/163 (27%), Positives = 84/163 (51%), Gaps = 13/163 (7%) Query: 17 LYASSKALGFDIDYRKLLKAF---RSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYN 73 ++ + + D R++L+ F +S +I A++YT + +Q D L Sbjct: 1 MFYAQQNEWVVFDPRRVLEYFKNEQSETTLINAFWYTGLKDPQDQ-----RGFRDALISL 55 Query: 74 GFQVVAKVAKEF-TENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAAL 132 G+ V K+ KE+ ++ GR K+++D+E+ VD F + + +V+FSGDG F + L Sbjct: 56 GYTVRTKILKEYCDDSSGRYSQKANLDIEIVVDMFNTVDQYDRVVLFSGDGDFERAIELL 115 Query: 133 QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 + K +T+VST M + +LR D ++DL +++ I + Sbjct: 116 RSKNTHITVVST----EGMIARELRNATDRYIDLNDIRDRIEK 154 >gi|89092681|ref|ZP_01165634.1| hypothetical protein MED92_15283 [Oceanospirillum sp. MED92] gi|89083193|gb|EAR62412.1| hypothetical protein MED92_15283 [Oceanospirillum sp. MED92] Length = 160 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 40/161 (24%), Positives = 74/161 (45%), Gaps = 13/161 (8%) Query: 7 KIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 KIA+F+D N+Y +++ A G +YRK +A ++ ++ A Y D Q Sbjct: 3 KIAIFVDVQNIYYTTRQAFGGSFNYRKFWQAISTQGEIVEANAYAIERADDGQ-----KK 57 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125 D L + GF V K + + K DV + +D EQ+ ++ +++ SGDG F Sbjct: 58 FQDALRHIGFNVKLKPFIQRKDG----TAKGDWDVGITIDVLEQAAHVDKVILLSGDGDF 113 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 L+ ++ K + + V S ++ + L D++ + Sbjct: 114 DLLLKKIRSTYK---VTTEVYSIEALTAKSLISATDHYHSI 151 >gi|327482342|gb|AEA85652.1| conserved hypothetical protein [Pseudomonas stutzeri DSM 4166] Length = 158 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 44/164 (26%), Positives = 70/164 (42%), Gaps = 14/164 (8%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIALF D NLY + + A G DY L R ++ AY Y GDP QQ Sbjct: 1 MKKIALFADVQNLYYTVRQAHGCHFDYSALWADVSRRGSIVEAYAYAIERGDPRQQQ--- 57 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + ++ K DV + +D + + ++ +V+ SGDG Sbjct: 58 --FQQILRKLGFTVKLKPYIQRSDGS----AKGDWDVGITIDVLDAAARVDEVVLASGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F L+ ++ + +T P + + L R A ++ + Sbjct: 112 DFDLLLERVRAAG----VEATAYGVPGLTAQSLIRAATRYVPIE 151 >gi|49081554|gb|AAT50177.1| PA3951 [synthetic construct] Length = 168 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 42/164 (25%), Positives = 71/164 (43%), Gaps = 15/164 (9%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 +KIA+F D NLY + + A G ++Y L ++ AY Y GDP QQ Sbjct: 10 KKIAVFADVQNLYYTVRQAYGCHLNYAALWADIARGGSIVEAYAYAIDRGDPRQQQ---- 65 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 L GF V K + + K DV + +D + + ++ +V+ SGDG Sbjct: 66 -FQQILRNLGFTVKLKPYIQRADGS----AKGDWDVGITIDVLDAAPRVDEVVLLSGDGD 120 Query: 125 FTTLVA-ALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F L+ ++ +V+T P + ++ L R A ++ + Sbjct: 121 FDLLLEKVIRAHG----VVATAYGVPGLTANALIRAASRYVPIE 160 >gi|262395374|ref|YP_003287227.1| hypothetical protein VEA_000074 [Vibrio sp. Ex25] gi|262338968|gb|ACY52762.1| hypothetical protein VEA_000074 [Vibrio sp. Ex25] Length = 162 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 44/167 (26%), Positives = 74/167 (44%), Gaps = 13/167 (7%) Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 + ++KIA+ +D N+Y + + A + DY + V+ A Y DP+Q Sbjct: 4 ERKQKIAILVDVQNVYYTCREAYRSNFDYNQFWYVATQGKEVVSARAYAIASNDPKQ--- 60 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 L GF+V+ K + + K DV + +DA E + +E +++ SG Sbjct: 61 --RQFHHILRGVGFEVMLKPYIQRRDGS----SKGDWDVGITLDAIEIAPEVEEVILVSG 114 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 DG F+ LV +Q++ K TV P + S L AD F+ + Sbjct: 115 DGDFSLLVERIQQRFNKTV---TVYGVPKLTSQTLIDCADNFVAIDD 158 >gi|218290176|ref|ZP_03494335.1| protein of unknown function DUF88 [Alicyclobacillus acidocaldarius LAA1] gi|258512267|ref|YP_003185701.1| hypothetical protein Aaci_2303 [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|218239771|gb|EED06961.1| protein of unknown function DUF88 [Alicyclobacillus acidocaldarius LAA1] gi|257478993|gb|ACV59312.1| protein of unknown function DUF88 [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 168 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 50/171 (29%), Positives = 90/171 (52%), Gaps = 9/171 (5%) Query: 7 KIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 +++LF+DGAN Y + L + ID +KLL+ +S+ ++ A+YY Sbjct: 2 RVSLFVDGANYYYMQRDKLKWTIDAQKLLEWAKSKGELVDAFYYIGRS---SPSDVREQK 58 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125 LD L Y+G+ +V K KE + G K+++D+E+ +D F E + ++ SGDG F Sbjct: 59 YLDMLAYSGYSIVTKDIKEIVQEDGSITRKANLDIEIVLDMFNTIENYDMAILVSGDGDF 118 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD-YFMDLAYLKNEIAR 175 + L+ + KK ++ST + +LR A +F+D+ L++++ R Sbjct: 119 ERALQLLRARGKKFIVLSTA----GFIASELRMVAGMHFIDVNTLRDQLER 165 >gi|15599146|ref|NP_252640.1| hypothetical protein PA3951 [Pseudomonas aeruginosa PAO1] gi|107103468|ref|ZP_01367386.1| hypothetical protein PaerPA_01004538 [Pseudomonas aeruginosa PACS2] gi|116051991|ref|YP_789166.1| hypothetical protein PA14_12750 [Pseudomonas aeruginosa UCBPP-PA14] gi|218889766|ref|YP_002438630.1| hypothetical protein PLES_10241 [Pseudomonas aeruginosa LESB58] gi|254242637|ref|ZP_04935959.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] gi|296387523|ref|ZP_06876998.1| hypothetical protein PaerPAb_05192 [Pseudomonas aeruginosa PAb1] gi|313109387|ref|ZP_07795349.1| hypothetical protein PA39016_001770011 [Pseudomonas aeruginosa 39016] gi|9950139|gb|AAG07338.1|AE004813_5 conserved hypothetical protein [Pseudomonas aeruginosa PAO1] gi|115587212|gb|ABJ13227.1| conserved hypothetical protein [Pseudomonas aeruginosa UCBPP-PA14] gi|126196015|gb|EAZ60078.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] gi|218769989|emb|CAW25751.1| conserved hypothetical protein [Pseudomonas aeruginosa LESB58] gi|310881851|gb|EFQ40445.1| hypothetical protein PA39016_001770011 [Pseudomonas aeruginosa 39016] Length = 167 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 42/164 (25%), Positives = 71/164 (43%), Gaps = 15/164 (9%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 +KIA+F D NLY + + A G ++Y L ++ AY Y GDP QQ Sbjct: 10 KKIAVFADVQNLYYTVRQAYGCHLNYAALWADIARGGSIVEAYAYAIDRGDPRQQQ---- 65 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 L GF V K + + K DV + +D + + ++ +V+ SGDG Sbjct: 66 -FQQILRNLGFTVKLKPYIQRADGS----AKGDWDVGITIDVLDAAPRVDEVVLLSGDGD 120 Query: 125 FTTLVA-ALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F L+ ++ +V+T P + ++ L R A ++ + Sbjct: 121 FDLLLEKVIRAHG----VVATAYGVPGLTANALIRAASRYVPIE 160 >gi|297566075|ref|YP_003685047.1| hypothetical protein Mesil_1654 [Meiothermus silvanus DSM 9946] gi|296850524|gb|ADH63539.1| protein of unknown function DUF88 [Meiothermus silvanus DSM 9946] Length = 195 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 41/173 (23%), Positives = 77/173 (44%), Gaps = 12/173 (6%) Query: 2 FDPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 + P +++ LF+D NLY S++ ++++ LLK S ++RA Y + Sbjct: 14 YSPMQRVGLFVDTQNLYHSARDYYEKNVNFESLLKHAVSGRQLVRATAYVVEREGDTSAW 73 Query: 61 SPLHPLLDWLHYNGFQVVAK--VAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVI 118 P + L G++V KE T+ G+ + + D+ +A D L+ +V+ Sbjct: 74 ----PFIYKLSTIGYRVRRMNLTLKETTDE-GKPIYEGNWDMGIAADMVRLMHTLDVVVL 128 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 SGDG F ++ L + +V +V+ S +L D F+ L + + Sbjct: 129 GSGDGDFVDIIEVLMERGIRVEVVAF----KETTSQRLIDAVDRFVHLPEIPD 177 >gi|323492730|ref|ZP_08097874.1| hypothetical protein VIBR0546_00630 [Vibrio brasiliensis LMG 20546] gi|323313105|gb|EGA66225.1| hypothetical protein VIBR0546_00630 [Vibrio brasiliensis LMG 20546] Length = 160 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 41/166 (24%), Positives = 70/166 (42%), Gaps = 15/166 (9%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 EK+A+F+D N+Y +++ + DY + V+ A Y DP+Q Sbjct: 1 MEKVAIFVDVQNIYYTTRDKYRANFDYNQFWYIATEGREVVSANAYAIASHDPKQ----- 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + + K DV LA+D FE + ++ +++ SGDG Sbjct: 56 RQFHHILRGIGFNVQLKPFIQRNDGS----AKGDWDVGLALDVFETASQVDRVILLSGDG 111 Query: 124 CFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F LV +Q + KV + P + + L A+ ++ + Sbjct: 112 DFDVLVDRIQSRFGTKVDV----FGVPGLTAQSLIDVANNYIPIDE 153 >gi|28900837|ref|NP_800492.1| hypothetical protein VPA0982 [Vibrio parahaemolyticus RIMD 2210633] gi|260362550|ref|ZP_05775470.1| conserved hypothetical protein [Vibrio parahaemolyticus K5030] gi|260879204|ref|ZP_05891559.1| conserved hypothetical protein [Vibrio parahaemolyticus AN-5034] gi|260896739|ref|ZP_05905235.1| conserved hypothetical protein [Vibrio parahaemolyticus Peru-466] gi|13506637|gb|AAK08637.1| hypothetical protein [Vibrio parahaemolyticus] gi|28809283|dbj|BAC62325.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD 2210633] gi|308087322|gb|EFO37017.1| conserved hypothetical protein [Vibrio parahaemolyticus Peru-466] gi|308094054|gb|EFO43749.1| conserved hypothetical protein [Vibrio parahaemolyticus AN-5034] gi|308115257|gb|EFO52797.1| conserved hypothetical protein [Vibrio parahaemolyticus K5030] gi|328470741|gb|EGF41652.1| hypothetical protein VP10329_08072 [Vibrio parahaemolyticus 10329] Length = 162 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 45/167 (26%), Positives = 74/167 (44%), Gaps = 13/167 (7%) Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 D +EKIA+ +D N+Y + + A + DY + V+ A Y DP+Q Sbjct: 4 DHKEKIAILVDVQNVYYTCREAYRSNFDYNQFWYVATQEKEVVSAKAYAIASNDPKQ--- 60 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 L GF+V+ K + + K DV + +DA E + ++ +++ SG Sbjct: 61 --RQFHHILRGVGFEVMLKPYIQRRDGS----AKGDWDVGITLDAIEIAPDVDRVILVSG 114 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 DG F+ LV +Q++ K TV P + S L AD F+ + Sbjct: 115 DGDFSLLVERIQQRYNK---KVTVYGVPRLTSQTLIDCADNFVAIDD 158 >gi|157835942|pdb|2QIP|A Chain A, Crystal Structure Of A Protein Of Unknown Function Vpa0982 From Vibrio Parahaemolyticus Rimd 2210633 Length = 165 Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats. Identities = 45/167 (26%), Positives = 73/167 (43%), Gaps = 13/167 (7%) Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 D +EKIA+ +D N+Y + + A + DY + V+ A Y DP+Q Sbjct: 7 DHKEKIAILVDVQNVYYTCREAYRSNFDYNQFWYVATQEKEVVSAKAYAIASNDPKQ--- 63 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 L GF+V K + + K DV + +DA E + ++ +++ SG Sbjct: 64 --RQFHHILRGVGFEVXLKPYIQRRDGS----AKGDWDVGITLDAIEIAPDVDRVILVSG 117 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 DG F+ LV +Q++ K TV P + S L AD F+ + Sbjct: 118 DGDFSLLVERIQQRYNK---KVTVYGVPRLTSQTLIDCADNFVAIDD 161 >gi|86608534|ref|YP_477296.1| hypothetical protein CYB_1055 [Synechococcus sp. JA-2-3B'a(2-13)] gi|86557076|gb|ABD02033.1| conserved hypothetical protein [Synechococcus sp. JA-2-3B'a(2-13)] Length = 382 Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats. Identities = 43/168 (25%), Positives = 75/168 (44%), Gaps = 12/168 (7%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 PR+ + +FID ANL+AS++ G +DY LL + + Y+ V ++ Sbjct: 211 PRKALGVFIDAANLHASAQQWGSHLDYPSLLSWLAQGRSEMEVHVYSGV----DRHNLAQ 266 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L L G++VV K + K+++D EL VD E +++ SGDG Sbjct: 267 RRFLRELRKQGYRVVTKPVVIHADGS----RKANLDGELIVDLMALHSHYETVLLLSGDG 322 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 F + ++R+ ++ + + + L R AD F+DL + Sbjct: 323 DFVPALKHIRRQGCRLEVAA----YRPNTNPALIRIADQFVDLCAWQG 366 >gi|260901483|ref|ZP_05909878.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ4037] gi|308107667|gb|EFO45207.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ4037] Length = 162 Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats. Identities = 45/167 (26%), Positives = 74/167 (44%), Gaps = 13/167 (7%) Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 D +EKIA+ +D N+Y + + A + DY + V+ A Y DP+Q Sbjct: 4 DHKEKIAILVDVQNVYYTCREAYRSNFDYNQFWYVATQEKEVVSAKAYAIASNDPKQ--- 60 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 L GF+V+ K + + K DV + +DA E + ++ +++ SG Sbjct: 61 --RQFHHILRGVGFEVMLKPYIQRRDGS----AKGDWDVGITLDAIEIAPDVDRVILVSG 114 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 DG F+ LV +Q++ K TV P + S L AD F+ + Sbjct: 115 DGDFSLLVERIQQRYNK---KVTVYGAPRLTSQTLIDCADNFVAIDD 158 >gi|328951205|ref|YP_004368540.1| Domain of unknown function DUF88 [Marinithermus hydrothermalis DSM 14884] gi|328451529|gb|AEB12430.1| Domain of unknown function DUF88 [Marinithermus hydrothermalis DSM 14884] Length = 186 Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats. Identities = 44/177 (24%), Positives = 84/177 (47%), Gaps = 16/177 (9%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 E+I LFIDG+ +Y+++K +G+++D+R++L+ FR + A+YY + +++ Sbjct: 1 MERIGLFIDGSYIYSAAKRMGWNVDHRRVLEHFRGDRALYNAFYYAPITDPNDERQL--- 57 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 LD L + G+ V + + + N G V L D + E +I SG Sbjct: 58 KFLDALVFMGYTVRSHEVRGESPNLG---------VYLVTDLLLTAPRWEVALISSGARE 108 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 V A++ K+V ++ P + +LR +D F+D+ + + R P + Sbjct: 109 IAPAVEAVRAMGKEVRLL----GLPELTDLELRSSSDRFIDIREYREVLERQPGGRR 161 >gi|148977299|ref|ZP_01813913.1| hypothetical protein VSWAT3_11922 [Vibrionales bacterium SWAT-3] gi|145963412|gb|EDK28676.1| hypothetical protein VSWAT3_11922 [Vibrionales bacterium SWAT-3] Length = 157 Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats. Identities = 44/165 (26%), Positives = 70/165 (42%), Gaps = 15/165 (9%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 E IA+ +D N+Y +++ + DY + V+ A+ Y DP+Q Sbjct: 1 MENIAILVDVQNVYYTTRDKYRSNFDYNQFWYVATEGRNVVAAHAYAISSQDPKQ----- 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + + K DV +A+DA E +E ++ +V+ SGDG Sbjct: 56 RQFHHILRGVGFDVKLKPFIQRRDGS----AKGDWDVGIALDAIELAENVDTIVLVSGDG 111 Query: 124 CFTTLVAAL-QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F LV + QR KKV + P + + L A F+ + Sbjct: 112 DFEILVERIKQRFGKKVEV----YGVPGLTAQNLIDSASKFVPIE 152 >gi|330446321|ref|ZP_08309973.1| putative uncharacterized protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328490512|dbj|GAA04470.1| putative uncharacterized protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 159 Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats. Identities = 39/165 (23%), Positives = 68/165 (41%), Gaps = 13/165 (7%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 EK+A+F+D N+Y + + + DY +I AY Y GD +Q Sbjct: 1 MEKVAIFVDVQNIYYTVREKYHANFDYNAFWSEVSQDREIIAAYAYAIHKGDEKQ----- 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 + L GF V K + ++ K DV + +D E + ++ +++ SGDG Sbjct: 56 RQFQNILRAIGFDVKLKPFIQRSDGS----AKGDWDVGITLDVIEHAPEVDRIILLSGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F LV +Q K + V P + + L A ++ ++ Sbjct: 112 DFDLLVEKVQTKYNAIV---EVYGVPGLTAASLINSATHYREIED 153 >gi|94985051|ref|YP_604415.1| hypothetical protein Dgeo_0945 [Deinococcus geothermalis DSM 11300] gi|94555332|gb|ABF45246.1| protein of unknown function DUF88 [Deinococcus geothermalis DSM 11300] Length = 181 Score = 157 bits (399), Expect = 4e-37, Method: Composition-based stats. Identities = 39/172 (22%), Positives = 78/172 (45%), Gaps = 10/172 (5%) Query: 4 PREKIALFIDGANLYASSKAL-GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 R ++ +FID NLY S++ L +++ +L++ ++ A YT + + Sbjct: 6 SRPRVGVFIDTQNLYHSARDLLERTVNFETILRSATEGRELVHAIAYTV----EREGEAT 61 Query: 63 LHPLLDWLHYNGFQVV-AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 P + L G++V + G+ + + D+ + D + L+ +V+ SG Sbjct: 62 ARPFIYKLSALGYKVRRMNLTLHHVTEGGKAIYEGNWDMGIVADMVRLIDHLDIVVLGSG 121 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 DG FT +V LQ + K+V +++ + +L AD F L L++ + Sbjct: 122 DGDFTDVVEVLQERGKRVEVIAF----REHTAQKLIDAADRFTHLPDLEDAL 169 >gi|260778792|ref|ZP_05887684.1| hypothetical protein VIC_004198 [Vibrio coralliilyticus ATCC BAA-450] gi|260604956|gb|EEX31251.1| hypothetical protein VIC_004198 [Vibrio coralliilyticus ATCC BAA-450] Length = 160 Score = 157 bits (399), Expect = 5e-37, Method: Composition-based stats. Identities = 41/166 (24%), Positives = 74/166 (44%), Gaps = 15/166 (9%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 EK+A+F+D N+Y +++ + DY + V A+ Y DP+Q+ Sbjct: 1 MEKVAIFVDVQNIYYTTREKYRANFDYNEFWYVATEGRDVTEAHAYAIASHDPKQR--QF 58 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 H +L + GF V K + + K DV +A+D +E + ++ +++ SGDG Sbjct: 59 HHILRGI---GFNVKLKPFIQRQDGS----AKGDWDVGIALDVYEAASKVDRVILLSGDG 111 Query: 124 CFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F LV +Q + KV + P +++ L D F+ + Sbjct: 112 DFDVLVKRVQERFGTKVDV----FGVPGLSAQSLIDVCDKFIPIEE 153 >gi|163803423|ref|ZP_02197297.1| hypothetical protein 1103602000421_AND4_08566 [Vibrio sp. AND4] gi|159172772|gb|EDP57618.1| hypothetical protein AND4_08566 [Vibrio sp. AND4] Length = 162 Score = 157 bits (398), Expect = 6e-37, Method: Composition-based stats. Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 13/167 (7%) Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 + ++KIA+ +D N+Y + + A + DY + + V A Y DP+Q Sbjct: 4 ESKQKIAILVDVQNVYYTCREAYRSNFDYNQFWYVATNGKEVASARAYAIASNDPKQ--- 60 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 L GF+V+ K + + K DV + +DA E + ++ +++ SG Sbjct: 61 --RQFHHILRGVGFEVMLKPYIQRRDGS----AKGDWDVGITLDAIEAAAEVDEIILVSG 114 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 DG F+ LV +Q++ K TV P + S L AD F+ + Sbjct: 115 DGDFSMLVERIQQRFNK---KVTVYGVPKLTSQNLIDCADNFVAIDE 158 >gi|320450466|ref|YP_004202562.1| hypothetical protein TSC_c13940 [Thermus scotoductus SA-01] gi|320150635|gb|ADW22013.1| hypothetical protein TSC_c13940 [Thermus scotoductus SA-01] Length = 178 Score = 157 bits (398), Expect = 6e-37, Method: Composition-based stats. Identities = 37/182 (20%), Positives = 77/182 (42%), Gaps = 12/182 (6%) Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 P +++ +F+D NLY S++ ++++ LL+ ++RA Y + Sbjct: 6 HPDQRVGVFVDTQNLYHSARDYYERNVNFESLLRFAVGGRRLVRATAYVVEKEGDTSAW- 64 Query: 62 PLHPLLDWLHYNGFQVVAK--VAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIF 119 P + L G++V KE E G+ + + D+ +A D L+ +V+ Sbjct: 65 ---PFIYKLSTIGYRVRRMYLTVKELGEG-GKPIYEGNWDMGIAADMVRLMPHLDVVVLG 120 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 SGDG F ++ L + +V +++ + +L D F+ L + N + Sbjct: 121 SGDGDFVEILEVLMERGIRVEVIAF----RETTAQKLIDAVDRFVHLPDIPNAFMEPKNT 176 Query: 180 DK 181 ++ Sbjct: 177 ER 178 >gi|330969505|gb|EGH69571.1| hypothetical protein PSYAR_03309 [Pseudomonas syringae pv. aceris str. M302273PT] Length = 158 Score = 157 bits (397), Expect = 7e-37, Method: Composition-based stats. Identities = 40/164 (24%), Positives = 70/164 (42%), Gaps = 13/164 (7%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIA+F D NLY + + A G +Y L R ++ A+ Y GD +QQ Sbjct: 1 MKKIAVFADVQNLYYTVRQAHGCHFNYAALWADISKRGEIVHAFAYAIDRGDSKQQQ--- 57 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + ++ K DV + +D + + ++ +V+ SGDG Sbjct: 58 --FQQILRNLGFTVRLKPYIQRSDGS----AKGDWDVGITIDIMDYAPQVDEIVLASGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F L+ + K + + P + ++ L R A ++ + Sbjct: 112 DFDMLLERVISK---HGVEAVAYGVPGLTANSLIRAASRYVPIE 152 >gi|163783881|ref|ZP_02178857.1| hypothetical protein HG1285_05285 [Hydrogenivirga sp. 128-5-R1-1] gi|159880844|gb|EDP74372.1| hypothetical protein HG1285_05285 [Hydrogenivirga sp. 128-5-R1-1] Length = 174 Score = 157 bits (397), Expect = 7e-37, Method: Composition-based stats. Identities = 45/176 (25%), Positives = 80/176 (45%), Gaps = 14/176 (7%) Query: 3 DPREKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 +++A+F+D NLY S++ +D+ K+L + +IRA Y + +Q Sbjct: 6 YKNQRVAVFLDVQNLYYSARDVFNRKVDFEKVLFKILNGRQLIRALAYIIKLQGVDQ--- 62 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFT----ENCGRKRVKSSMDVELAVDAFEQSEGLEHLV 117 + L + G+++ K K + E +K+ D+ +A+DA +E ++ V Sbjct: 63 --KGFISSLKHIGYEIKEKEPKIYKRLDEEGNLITTIKADWDMGIAMDAISIAEKIDVAV 120 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 + +GDG F LV L K KV I + + +L D F+DL + EI Sbjct: 121 LTTGDGDFADLVKYLHTKGVKVEIAAF----KQTTAKELIEVCDEFIDLTHFGEEI 172 >gi|153836889|ref|ZP_01989556.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ3810] gi|149749847|gb|EDM60592.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ3810] Length = 162 Score = 156 bits (396), Expect = 9e-37, Method: Composition-based stats. Identities = 45/167 (26%), Positives = 74/167 (44%), Gaps = 13/167 (7%) Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 D +EKIA+ +D N+Y + + A + DY + V+ A Y DP+Q Sbjct: 4 DHKEKIAILVDVQNVYYTCREAYRSNFDYNQFWYVATQEKEVVSAKAYAIASNDPKQ--- 60 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 L GF+V+ K + + K DV + +DA E + ++ +++ SG Sbjct: 61 --RQFHHILRGVGFEVMLKPYIQRRDGS----AKGDWDVGITLDAIEITPDVDRVILVSG 114 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 DG F+ LV +Q++ K TV P + S L AD F+ + Sbjct: 115 DGDFSLLVERIQQRYNK---KVTVYGVPRLTSQTLIDCADNFVAIDD 158 >gi|332139998|ref|YP_004425736.1| hypothetical protein MADE_1002950 [Alteromonas macleodii str. 'Deep ecotype'] gi|327550020|gb|AEA96738.1| hypothetical protein MADE_1002950 [Alteromonas macleodii str. 'Deep ecotype'] Length = 156 Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats. Identities = 39/164 (23%), Positives = 74/164 (45%), Gaps = 14/164 (8%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +K L +D N+Y + + A + +Y + + + A+ Y GD +Q Sbjct: 1 MKKALLLVDVQNVYYTCRQAYKRNFNYNRFWRELSYNLDIEHAFAYAIDKGDSKQ----- 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 + L GF+V K + + K DV + VDA E + ++ +++ SGDG Sbjct: 56 REFQNILRAIGFEVKLKPFIQRADGS----AKGDWDVGITVDALEHASQVDEIILVSGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F LV AL+ K K VT+ P++ ++ +++ A ++ + Sbjct: 112 DFDILVNALKEKGKTVTV----YGVPALTAESIQKVATRYVPIN 151 >gi|330895533|gb|EGH27843.1| hypothetical protein PSYJA_01969 [Pseudomonas syringae pv. japonica str. M301072PT] gi|330938177|gb|EGH41874.1| hypothetical protein PSYPI_05358 [Pseudomonas syringae pv. pisi str. 1704B] gi|330961649|gb|EGH61909.1| hypothetical protein PMA4326_24166 [Pseudomonas syringae pv. maculicola str. ES4326] Length = 158 Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats. Identities = 40/164 (24%), Positives = 70/164 (42%), Gaps = 13/164 (7%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIA+F D NLY + + A G +Y L R ++ A+ Y GD +QQ Sbjct: 1 MKKIAVFADVQNLYYTVRQAHGCHFNYAALWADISKRGEIVHAFAYAIDRGDSKQQQ--- 57 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + ++ K DV + +D + + ++ +V+ SGDG Sbjct: 58 --FQQILRNLGFTVRLKPYIQRSDGS----AKGDWDVGITIDIMDFAPQVDEIVLASGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F L+ + K + + P + ++ L R A ++ + Sbjct: 112 DFDMLLERVISK---HGVEAVAYGVPGLTANSLIRAASRYVPIE 152 >gi|71736408|ref|YP_276474.1| hypothetical protein PSPPH_4358 [Pseudomonas syringae pv. phaseolicola 1448A] gi|257482175|ref|ZP_05636216.1| hypothetical protein PsyrptA_02837 [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289675840|ref|ZP_06496730.1| hypothetical protein PsyrpsF_21381 [Pseudomonas syringae pv. syringae FF5] gi|298488862|ref|ZP_07006887.1| hypothetical protein PSA3335_4345 [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|71556961|gb|AAZ36172.1| uncharacterized conserved protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|298156615|gb|EFH97710.1| hypothetical protein PSA3335_4345 [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|320322652|gb|EFW78745.1| hypothetical protein PsgB076_22027 [Pseudomonas syringae pv. glycinea str. B076] gi|320330563|gb|EFW86542.1| hypothetical protein PsgRace4_08595 [Pseudomonas syringae pv. glycinea str. race 4] gi|330873569|gb|EGH07718.1| hypothetical protein Pgy4_04537 [Pseudomonas syringae pv. glycinea str. race 4] gi|330888791|gb|EGH21452.1| hypothetical protein PSYMO_08069 [Pseudomonas syringae pv. mori str. 301020] gi|330987664|gb|EGH85767.1| hypothetical protein PLA107_21753 [Pseudomonas syringae pv. lachrymans str. M301315] gi|331011359|gb|EGH91415.1| hypothetical protein PSYTB_17135 [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 158 Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats. Identities = 40/164 (24%), Positives = 70/164 (42%), Gaps = 13/164 (7%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIA+F D NLY + + A G +Y L R ++ A+ Y GD +QQ Sbjct: 1 MKKIAVFADVQNLYYTVRQAHGCHFNYAALWADISKRGEIVHAFAYAIDRGDSKQQQ--- 57 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + ++ K DV + +D + + ++ +V+ SGDG Sbjct: 58 --FQQILRNLGFTVRLKPYIQRSDGS----AKGDWDVGITIDIMDFAPQVDEVVLASGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F L+ + K + + P + ++ L R A ++ + Sbjct: 112 DFDMLLERVISK---HGVEAVAYGVPGLTANSLIRAASRYVPIE 152 >gi|66047528|ref|YP_237369.1| hypothetical protein Psyr_4301 [Pseudomonas syringae pv. syringae B728a] gi|302184786|ref|ZP_07261459.1| hypothetical protein Psyrps6_00540 [Pseudomonas syringae pv. syringae 642] gi|63258235|gb|AAY39331.1| Protein of unknown function DUF88 [Pseudomonas syringae pv. syringae B728a] Length = 158 Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats. Identities = 40/164 (24%), Positives = 70/164 (42%), Gaps = 13/164 (7%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIA+F D NLY + + A G +Y L R ++ A+ Y GD +QQ Sbjct: 1 MKKIAVFADVQNLYYTVRQAHGCHFNYAALWADISKRGEIVHAFAYAIDRGDSKQQQ--- 57 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + ++ K DV + +D + + ++ +V+ SGDG Sbjct: 58 --FQQILRNLGFTVRLKPYIQRSDGS----AKGDWDVGITIDIMDFAPQVDEIVLASGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F L+ + K + + P + ++ L R A ++ + Sbjct: 112 DFDMLLERVISK---HGVEAVAYGVPGLTANSLIRAASRYVPIE 152 >gi|189347490|ref|YP_001944019.1| hypothetical protein Clim_2008 [Chlorobium limicola DSM 245] gi|189341637|gb|ACD91040.1| protein of unknown function DUF88 [Chlorobium limicola DSM 245] Length = 304 Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats. Identities = 56/178 (31%), Positives = 96/178 (53%), Gaps = 9/178 (5%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 +K ALFIDGANL+ + + LG+ ID+ +L+ F +R V+ A YY P + Sbjct: 28 MSMQKAALFIDGANLFYTQRHLGWQIDFSRLMLYFTNRYTVVSARYYVPSPDPPSEDQVA 87 Query: 63 LHPLLDWLHYNGFQVVAKVAKE-FTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 + + L +GF++++K K+ + G +K ++D+ELAVDA E V+FSG Sbjct: 88 FNRV---LITHGFEIISKPVKKIVNRDTGEIIMKGNLDIELAVDAMLTEHQFEVFVLFSG 144 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD-YFMDLAYLKNEIARDPD 178 D F L+ A+Q K K V++ ST +++ +L +D F D++ + E+++ Sbjct: 145 DSDFLPLIMAMQMKGKTVSVFST----RGISARELYSGSDMDFHDISLMAVEMSQSQS 198 >gi|330976912|gb|EGH76935.1| hypothetical protein PSYAP_09660 [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 158 Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats. Identities = 41/164 (25%), Positives = 71/164 (43%), Gaps = 13/164 (7%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIA+F D NLY + + A G +Y L R R ++ A+ Y GD +QQ Sbjct: 1 MKKIAVFADVQNLYYTVRQAHGCHFNYAALWADIRKRGEIVHAFAYAIDRGDSKQQQ--- 57 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + ++ K DV + +D + + ++ +V+ SGDG Sbjct: 58 --FQQILRNLGFTVRLKPYIQRSDGS----AKGDWDVGITIDIMDFAPQVDEIVLASGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F L+ + K + + P + ++ L R A ++ + Sbjct: 112 DFDMLLERVISK---HGVEAVAYGVPGLTANSLIRAASRYVPIE 152 >gi|86146656|ref|ZP_01064977.1| hypothetical protein MED222_07105 [Vibrio sp. MED222] gi|218676438|ref|YP_002395257.1| hypothetical protein VS_II0673 [Vibrio splendidus LGP32] gi|85835503|gb|EAQ53640.1| hypothetical protein MED222_07105 [Vibrio sp. MED222] gi|218324706|emb|CAV26328.1| Conserved hypothetical protein [Vibrio splendidus LGP32] Length = 157 Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats. Identities = 41/165 (24%), Positives = 68/165 (41%), Gaps = 15/165 (9%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 E IA+ +D N+Y +++ + DY + V+ A Y DP+Q Sbjct: 1 MENIAILVDVQNVYYTTRDKYRSNFDYNQFWYVATEGRNVVEANAYAISSQDPKQ----- 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + + K DV +A+DA E +E ++ +V+ SGDG Sbjct: 56 RQFHHILRGVGFNVKLKPFIQRRDGS----AKGDWDVGIALDAIELAETVDTIVLVSGDG 111 Query: 124 CFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F LV ++ + K V + P + + L A F+ + Sbjct: 112 DFEILVERIKERFGKPVEV----YGVPGLTAQNLIDSASKFVPIE 152 >gi|218295524|ref|ZP_03496337.1| protein of unknown function DUF88 [Thermus aquaticus Y51MC23] gi|218244156|gb|EED10682.1| protein of unknown function DUF88 [Thermus aquaticus Y51MC23] Length = 179 Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats. Identities = 36/182 (19%), Positives = 77/182 (42%), Gaps = 11/182 (6%) Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 +++ +F+D NLY S++ ++++ LL+ ++RA Y + Sbjct: 7 HQDQRVGVFVDTQNLYHSARDYYERNVNFESLLRFAVGGRRLVRATAYVVEKEGDTSAW- 65 Query: 62 PLHPLLDWLHYNGFQVVAK-VAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 P + L G++V + + T GR + + D+ +A D L+ +V+ S Sbjct: 66 ---PFIYKLSTIGYRVRRMYLTVKETGEGGRPIYEGNWDMGIAADMVRLMPYLDVVVLGS 122 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F ++ L + +V +++ + +L D F+ L + N +P Sbjct: 123 GDGDFVEILEVLMERGIRVEVIAF----RETTAQRLIDAVDRFVHLPEIPNPFM-EPKNP 177 Query: 181 KK 182 ++ Sbjct: 178 ER 179 >gi|254481697|ref|ZP_05094940.1| conserved hypothetical protein [marine gamma proteobacterium HTCC2148] gi|214037826|gb|EEB78490.1| conserved hypothetical protein [marine gamma proteobacterium HTCC2148] Length = 200 Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 43/163 (26%), Positives = 73/163 (44%), Gaps = 13/163 (7%) Query: 6 EKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 EKI +F+D N+Y + + G + DY K ++ AY Y T GD +Q Sbjct: 44 EKITIFVDVQNIYYTCRQTYGRNFDYNKFWAEVTQNRELVGAYAYATDRGDAKQMQ---- 99 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 LH GF V K + + K+ D+ +A+D +E ++ + +V+ +GDG Sbjct: 100 -FQSILHAIGFTVKLKPVLKRRDGS----TKADWDIGIALDVYEAAQQCDTVVLLTGDGD 154 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F L+ ++R + V P++ SD L A F+ + Sbjct: 155 FGLLLDRIKR---RFDTNCEVYGVPALTSDILISAASRFVPID 194 >gi|70732718|ref|YP_262481.1| hypothetical protein PFL_5413 [Pseudomonas fluorescens Pf-5] gi|68347017|gb|AAY94623.1| conserved hypothetical protein [Pseudomonas fluorescens Pf-5] Length = 159 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 40/164 (24%), Positives = 70/164 (42%), Gaps = 13/164 (7%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIA+F D NLY + + A G +Y L + ++ AY Y GD +QQ Sbjct: 1 MKKIAVFADVQNLYYTVRQAYGCHFNYAALWADISKQGQIVEAYAYAIDRGDSKQQQ--- 57 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + ++ K DV + +D + + ++ +V+ SGDG Sbjct: 58 --FQQILRNLGFTVKLKPYIQRSDGS----AKGDWDVGITIDIMDAAAHVDEVVLASGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F L+ + K + + P + ++ L R A ++ + Sbjct: 112 DFDLLLERIIHK---HGVSAVAYGVPGLTANSLIRAATRYVPIE 152 >gi|254507966|ref|ZP_05120094.1| conserved hypothetical protein [Vibrio parahaemolyticus 16] gi|219549074|gb|EED26071.1| conserved hypothetical protein [Vibrio parahaemolyticus 16] Length = 161 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 41/166 (24%), Positives = 70/166 (42%), Gaps = 15/166 (9%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 EKIA+F+D N+Y +++ + DY + V+ A Y DP+Q Sbjct: 1 MEKIAIFVDVQNIYYTTRDKYRANFDYNEFWYLATEGKEVVEAKAYAIASTDPKQ----- 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + + K DV +A+D +E + ++ +++ SGDG Sbjct: 56 RQFHHILRGIGFDVKLKPYIQRADGS----TKGDWDVGIALDVYEAANKVDRVILLSGDG 111 Query: 124 CFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F LV +Q++ KV + S P + + L D + + Sbjct: 112 DFEILVERIQQRFGTKVDVYS----VPGLTAQALIDVCDKHIPIEE 153 >gi|152985348|ref|YP_001346543.1| hypothetical protein PSPA7_1157 [Pseudomonas aeruginosa PA7] gi|150960506|gb|ABR82531.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7] Length = 167 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 41/164 (25%), Positives = 71/164 (43%), Gaps = 15/164 (9%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 +KIA+F D NLY + + A G ++Y L R ++ AY Y GDP QQ Sbjct: 10 KKIAVFADVQNLYYTVRQAYGCHLNYAALWADIARRGRIVEAYAYAIDRGDPRQQQ---- 65 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 L GF V K + + K DV + +D + + ++ +V+ SGDG Sbjct: 66 -FQRILRNLGFTVKLKPYIQRADGS----AKGDWDVGITIDVLDAAPRVDEVVLLSGDGD 120 Query: 125 FTTLVA-ALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F L+ ++ + ++ P + ++ L R A ++ + Sbjct: 121 FDLLLEKVIRAHG----VEASAYGVPGLTANALIRAASRYVPIE 160 >gi|84393278|ref|ZP_00992039.1| hypothetical protein V12B01_14530 [Vibrio splendidus 12B01] gi|84376103|gb|EAP92990.1| hypothetical protein V12B01_14530 [Vibrio splendidus 12B01] Length = 157 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 41/165 (24%), Positives = 68/165 (41%), Gaps = 15/165 (9%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 E IA+ +D N+Y +++ + DY + V+ A Y DP+Q Sbjct: 1 MENIAILVDVQNVYYTTRDKYRSNFDYNQFWYVATEGRNVVAANAYAISSQDPKQ----- 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + + K DV +A+DA E +E ++ +V+ SGDG Sbjct: 56 RQFHHILRGVGFNVKLKPFIQRRDGS----AKGDWDVGIALDAIELAETVDTIVLVSGDG 111 Query: 124 CFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F LV ++ + K V + P + + L A F+ + Sbjct: 112 DFEILVERIKERFGKPVEV----YGVPGLTAQNLIDSASKFVPIE 152 >gi|291297150|ref|YP_003508548.1| hypothetical protein Mrub_2781 [Meiothermus ruber DSM 1279] gi|290472109|gb|ADD29528.1| protein of unknown function DUF88 [Meiothermus ruber DSM 1279] Length = 190 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 47/170 (27%), Positives = 85/170 (50%), Gaps = 17/170 (10%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 K ALFIDG+ +Y ++K LG++ID+RK + F + A+YY V +++ Sbjct: 2 KTALFIDGSYMYDAAKRLGWNIDHRKAIGVFSKPEDLYNAFYYAPVTDSNDER---QQKF 58 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126 LD L + G+ V ++ E G R ++ +A D + E V+ SG G Sbjct: 59 LDALVFMGYTVRSR------ETHGDPRFEA----MIATDLLVTAPRWERAVVASGSGDLA 108 Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 ++AL+ + K++ ++ P + +LR Q+D ++DL L+ ++ R Sbjct: 109 HTLSALRAQGKEIHLL----GVPELTDLELRNQSDRYLDLRELQAQLERT 154 >gi|163782049|ref|ZP_02177048.1| hypothetical protein HG1285_17989 [Hydrogenivirga sp. 128-5-R1-1] gi|159882581|gb|EDP76086.1| hypothetical protein HG1285_17989 [Hydrogenivirga sp. 128-5-R1-1] Length = 165 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 47/171 (27%), Positives = 79/171 (46%), Gaps = 13/171 (7%) Query: 5 REKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 ++ +FIDG NLY K L ID KL++ F+ + ++Y + ++Q Sbjct: 1 MKRAGIFIDGTNLYFVQKNFLHRKIDIVKLVEYFKRFYSIYNVFFYLAYREEDDKQ---- 56 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L ++G VV K K + +K ++DVE+ +D + + V+ SGD Sbjct: 57 EKFYRMLAFSGITVVRKPLKHLPDGS----LKGNLDVEIVIDMLLTKDNYDVAVLCSGDS 112 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 F L+ L+ K+V VST S +S ++ AD ++DL + EI Sbjct: 113 DFEKLINVLRSFGKEVVCVSTRDS----SSIEVVNAADRYIDLRDIIEEIK 159 >gi|323497755|ref|ZP_08102770.1| hypothetical protein VISI1226_04395 [Vibrio sinaloensis DSM 21326] gi|323317231|gb|EGA70227.1| hypothetical protein VISI1226_04395 [Vibrio sinaloensis DSM 21326] Length = 160 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 41/166 (24%), Positives = 72/166 (43%), Gaps = 15/166 (9%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 EKIA+F+D N+Y +++ + DY + V+ A Y DP+Q Sbjct: 1 MEKIAIFVDVQNIYYTTRDKYRANFDYNQFWYVATEGQQVVSASAYAIASTDPKQ----- 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + ++ K DV +A+D +E + ++ +++ SGDG Sbjct: 56 RQFHHILRGIGFDVKLKPYIQRSDGS----TKGDWDVGIALDVYELASQVDRVILLSGDG 111 Query: 124 CFTTLVAALQRKV-KKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F LV +Q++ KV + + P + + L D F+ + Sbjct: 112 DFEMLVTRIQQRFATKVDV----YAVPGLTAQNLIDVCDKFIPIDE 153 >gi|226356465|ref|YP_002786205.1| hypothetical protein Deide_14960 [Deinococcus deserti VCD115] gi|226318455|gb|ACO46451.1| conserved hypothetical protein [Deinococcus deserti VCD115] Length = 193 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 39/172 (22%), Positives = 77/172 (44%), Gaps = 10/172 (5%) Query: 4 PREKIALFIDGANLYASSKAL-GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 R ++ LF+D NLY S++ L +++ +L ++ A YT + + Sbjct: 6 QRPRVGLFVDTQNLYHSARDLLERTVNFETILNVATEGRELVHAISYTV----EREGEAT 61 Query: 63 LHPLLDWLHYNGFQVV-AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 P + L G++V + + G+ + + D+ + D + L+ +V+ SG Sbjct: 62 ARPFIYKLSALGYKVRRMNLTLHHVTDGGKAIYEGNWDMGIVADMVRLMDHLDIVVLGSG 121 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 DG +T +V LQ + K+V +++ + +L AD FM L L+ + Sbjct: 122 DGDYTEIVEVLQERGKRVEVIAF----REHTAQKLIDAADRFMHLPDLEGAL 169 >gi|257389218|ref|YP_003178991.1| hypothetical protein Hmuk_3179 [Halomicrobium mukohataei DSM 12286] gi|257171525|gb|ACV49284.1| protein of unknown function DUF88 [Halomicrobium mukohataei DSM 12286] Length = 165 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 41/171 (23%), Positives = 77/171 (45%), Gaps = 14/171 (8%) Query: 3 DPREKIALFIDGANLYASSKALG-FDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 P +++ + D NLY ++++L +IDY LL + + RA Y P+++ Sbjct: 5 HPGQRVGVLADAQNLYHTARSLHTRNIDYEALLDEAVNDRALTRAIAYVIRANSPDEE-- 62 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 + L GF+ K K F G K+ DV +++DA + ++ +V+ +G Sbjct: 63 ---SFFEALEDIGFETRIKDIKTF----GDGSKKADWDVGMSLDAVSLAPHVDTVVLITG 115 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 DG F L L+ + KV + +++L AD+F +L+ + Sbjct: 116 DGDFARLCRYLRHEGVKVETMGF----EESTAEELVEAADHFRNLSDDAEQ 162 >gi|320451037|ref|YP_004203133.1| hypothetical protein TSC_c19750 [Thermus scotoductus SA-01] gi|320151206|gb|ADW22584.1| hypothetical protein TSC_c19750 [Thermus scotoductus SA-01] Length = 182 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 40/170 (23%), Positives = 84/170 (49%), Gaps = 17/170 (10%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 ++ALFIDG+ +Y ++K LG+++D+R++L F + + A+YY + +++ Sbjct: 2 RVALFIDGSYMYLATKRLGWNVDHRRVLTQFATPEQLYNAFYYVPITDPEDER---QQRF 58 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126 +D L + G+ V +++ + G R ++ M A D + + ++ SG G Sbjct: 59 IDALVFMGYTVRSRLVR------GEARFEAMM----ATDLLTTAPRWDRAIVASGSGELA 108 Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 + L+ K++ ++ +A +LR QAD F++L + + R Sbjct: 109 HTFSTLRAMGKEIHLL----GVHELADLELRNQADRFLNLPEWREVLERT 154 >gi|91201953|emb|CAJ75013.1| conserved hypothetical protein [Candidatus Kuenenia stuttgartiensis] Length = 177 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 41/167 (24%), Positives = 72/167 (43%), Gaps = 14/167 (8%) Query: 3 DPREKIALFIDGANLYASSKAL-GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 + ++I +F+D N++ S+KAL IDY KLL ++RA Y D +Q Sbjct: 8 NSPQRIGVFVDVQNMFYSAKALHQSKIDYSKLLLEIVGGRNLVRAIAYIVQKPDVDQS-- 65 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 D L G+++ K + + K D+ +A+D + L+ +V+ +G Sbjct: 66 ---SFTDALCRLGYEIKTKDLRLRPDG----TAKGDWDMGIAIDTISIASKLDTVVLVTG 118 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 DG F LV L+ +V VS S + +L + + + Sbjct: 119 DGDFVPLVELLKYHGCRVETVSFRRS----TAIELINVSTKYTAIEE 161 >gi|92112887|ref|YP_572815.1| hypothetical protein Csal_0758 [Chromohalobacter salexigens DSM 3043] gi|91795977|gb|ABE58116.1| protein of unknown function DUF88 [Chromohalobacter salexigens DSM 3043] Length = 158 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 40/163 (24%), Positives = 70/163 (42%), Gaps = 15/163 (9%) Query: 7 KIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 ++A+F+D N+Y + + A G DYR+ + V+ Y T GD +Q Sbjct: 3 RVAIFVDTQNVYYTVREAYGKHFDYRRFWARATANREVLTVRCYATDKGDAKQ-----RE 57 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125 + L GF+V K + + K DV + +DA E + + +V+ SGDG F Sbjct: 58 FQNILRSIGFEVRLKPFIQRADGS----AKGDWDVGITLDAIEYAAQADVVVLVSGDGDF 113 Query: 126 TTLVAALQR-KVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 L ++ K+V + P + ++ L A F+ + Sbjct: 114 DLLAEKIREVHGKRVEV----YGVPKLTANSLINAASQFIPIE 152 >gi|330504961|ref|YP_004381830.1| hypothetical protein MDS_4047 [Pseudomonas mendocina NK-01] gi|328919247|gb|AEB60078.1| hypothetical protein MDS_4047 [Pseudomonas mendocina NK-01] Length = 159 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 41/164 (25%), Positives = 70/164 (42%), Gaps = 14/164 (8%) Query: 5 REKIALFIDGANLYASSKAL-GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIA+F D NLY + + + G DY L R +++ AY Y GD +QQ Sbjct: 1 MKKIAVFADVQNLYYTVRQVHGCHFDYSVLWAEVSRRGVIVEAYAYAIDRGDAKQQQ--- 57 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + + K DV + +D + E ++ +V+ SGDG Sbjct: 58 --FQQILRKLGFTVKLKPYIQRADGS----AKGDWDVGITIDVLDAVERVDEIVLASGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F L+ ++ + + + P + + L R A ++ + Sbjct: 112 DFDLLLERVRSRG----VEAIAFGAPGLTAQSLIRAASLYVPIE 151 >gi|90414813|ref|ZP_01222781.1| hypothetical protein P3TCK_17379 [Photobacterium profundum 3TCK] gi|90324118|gb|EAS40703.1| hypothetical protein P3TCK_17379 [Photobacterium profundum 3TCK] Length = 159 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 41/166 (24%), Positives = 69/166 (41%), Gaps = 15/166 (9%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 EK+A+F+D N+Y + K + DY V+ AY Y GD +Q Sbjct: 1 MEKVAIFVDVQNIYYTVKDKYKCNFDYNAFWAEATQGREVVAAYAYAIHRGDEKQGQ--- 57 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 + L GF+V K + ++ K DV + +D E + ++ +++ SGDG Sbjct: 58 --FQNILRGIGFEVKLKPFIQRSDGS----AKGDWDVGITLDVIEHAGDVDRVILLSGDG 111 Query: 124 CFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F LV +Q K V + P + + L A Y+ ++ Sbjct: 112 DFDLLVDKVQTKYGVDVEV----YGVPGLTATSLINTAHYYREIES 153 >gi|77461146|ref|YP_350653.1| hypothetical protein Pfl01_4925 [Pseudomonas fluorescens Pf0-1] gi|77385149|gb|ABA76662.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1] Length = 159 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 40/164 (24%), Positives = 70/164 (42%), Gaps = 13/164 (7%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIA+F D NLY + + A G +Y L ++ AY Y GD +QQ Sbjct: 1 MKKIAVFADVQNLYYTVRQAYGCHFNYAALWADVSQHGQIVEAYAYAIDRGDSKQQQ--- 57 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + ++ K DV + +D + ++ ++ +V+ SGDG Sbjct: 58 --FQQILRNLGFTVKLKPYIQRSDGS----AKGDWDVGITLDIMDAADHVDEIVLASGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F L+ + K + + P + ++ L R A ++ + Sbjct: 112 DFDMLLERIINK---HGVQAVAYGVPGLTANSLIRAASRYVPIE 152 >gi|213966787|ref|ZP_03394938.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1] gi|301383296|ref|ZP_07231714.1| hypothetical protein PsyrptM_11692 [Pseudomonas syringae pv. tomato Max13] gi|302062465|ref|ZP_07254006.1| hypothetical protein PsyrptK_20968 [Pseudomonas syringae pv. tomato K40] gi|302133447|ref|ZP_07259437.1| hypothetical protein PsyrptN_18744 [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213928637|gb|EEB62181.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1] gi|330873520|gb|EGH07669.1| hypothetical protein PSYMP_03990 [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330967689|gb|EGH67949.1| hypothetical protein PSYAC_24213 [Pseudomonas syringae pv. actinidiae str. M302091] gi|331018942|gb|EGH98998.1| hypothetical protein PLA106_23133 [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 158 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 40/164 (24%), Positives = 70/164 (42%), Gaps = 13/164 (7%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIA+F D NLY + + A G +Y L R ++ A+ Y GD +QQ Sbjct: 1 MKKIAVFADVQNLYYTVRQAYGCHFNYAALWADISKRGEIVHAFAYAIDRGDSKQQQ--- 57 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + ++ K DV + +D + + ++ +V+ SGDG Sbjct: 58 --FQQILRNLGFTVRLKPYIQRSDGS----AKGDWDVGITIDIMDFAPQVDEVVLASGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F L+ + K + + P + ++ L R A ++ + Sbjct: 112 DFDMLLDRVISK---HGVEAVAYGVPGLTANSLIRAASRYVPIE 152 >gi|146284019|ref|YP_001174172.1| hypothetical protein PST_3707 [Pseudomonas stutzeri A1501] gi|145572224|gb|ABP81330.1| conserved hypothetical protein [Pseudomonas stutzeri A1501] Length = 197 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 43/163 (26%), Positives = 70/163 (42%), Gaps = 14/163 (8%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 +KIALF D NLY + + A G +Y L R ++ AY Y GDP QQ Sbjct: 41 KKIALFADVQNLYYTVRQAHGCHFNYSALWADVSRRGTIVEAYAYAIERGDPRQQQ---- 96 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 L GF V K + ++ K DV + +D + + ++ +V+ SGDG Sbjct: 97 -FQQILRKLGFTVKLKPYIQRSDGS----AKGDWDVGITIDVLDAAARVDEVVLASGDGD 151 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F L+ ++ + +T P + + L R A ++ + Sbjct: 152 FDLLLERVRAGGAE----ATAYGVPGLTAQSLIRAATRYVPVE 190 >gi|261253046|ref|ZP_05945619.1| hypothetical protein VIA_003071 [Vibrio orientalis CIP 102891] gi|260936437|gb|EEX92426.1| hypothetical protein VIA_003071 [Vibrio orientalis CIP 102891] Length = 160 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 42/166 (25%), Positives = 74/166 (44%), Gaps = 15/166 (9%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 E +A+F+D N+Y +++ + DY + + +A Y DP+Q+ Sbjct: 1 METVAIFVDVQNIYYTTRDKYRANFDYNQFWYIATEGKQIEQANAYAISSHDPKQR--QF 58 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 H +L + GF V K + + K DV +A+D FE +E ++ +++ SGDG Sbjct: 59 HHILRGI---GFNVNLKPFIQRMDGS----AKGDWDVGIALDVFEAAEKVDRVILLSGDG 111 Query: 124 CFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F LV +Q K KV + P + + L +D F+ + Sbjct: 112 DFEILVQRIQEKFNTKVDV----YGVPGLTAQSLIDASDRFIPIDE 153 >gi|54308491|ref|YP_129511.1| hypothetical protein PBPRA1298 [Photobacterium profundum SS9] gi|46912920|emb|CAG19709.1| conserved hypothetical protein [Photobacterium profundum SS9] Length = 159 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 41/166 (24%), Positives = 69/166 (41%), Gaps = 15/166 (9%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 EK+A+F+D N+Y + K + DY V+ AY Y GD +Q Sbjct: 1 MEKVAIFVDVQNIYYTVKDKYKCNFDYNAFWAEATQGREVVAAYAYAIHRGDEKQGQ--- 57 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 + L GF+V K + ++ K DV + +D E + ++ +++ SGDG Sbjct: 58 --FQNILRGIGFEVKLKPFIQRSDGS----AKGDWDVGITLDVIEHAADVDRVILLSGDG 111 Query: 124 CFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F LV +Q K V + P + + L A Y+ ++ Sbjct: 112 DFDLLVDKVQTKYGVDVEV----YGVPGLTATSLINTAHYYREIES 153 >gi|289548415|ref|YP_003473403.1| hypothetical protein Thal_0643 [Thermocrinis albus DSM 14484] gi|289182032|gb|ADC89276.1| protein of unknown function DUF88 [Thermocrinis albus DSM 14484] Length = 196 Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats. Identities = 43/179 (24%), Positives = 79/179 (44%), Gaps = 17/179 (9%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE------- 57 E++ +FIDG+NL+ + + L IDY KL++ R ++RAY+Y V + + Sbjct: 1 MERVVIFIDGSNLFHAIRYLNIKIDYSKLVEFLREDRKLVRAYFYGAVPQERDVKRNTPE 60 Query: 58 -QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLE 114 + L+ L G +V ++ + ++ +D+ LA D + + Sbjct: 61 WESLLRQRRFLEELSLMGIKVKTAPLRKLPTG---EYLEKEVDIMLATDMLSMAYMNVYD 117 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 ++ SGD F+ V +QR K+V S + +S LR+ D F+ L + Sbjct: 118 TAILVSGDSDFSYTVEEVQRIGKRVENASFRKT----SSYLLRKICDRFILLDDYVDRF 172 >gi|90408478|ref|ZP_01216637.1| hypothetical protein PCNPT3_03246 [Psychromonas sp. CNPT3] gi|90310410|gb|EAS38536.1| hypothetical protein PCNPT3_03246 [Psychromonas sp. CNPT3] Length = 157 Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats. Identities = 38/160 (23%), Positives = 70/160 (43%), Gaps = 13/160 (8%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIA+F D N+Y +S+ A +YRKL + + + + A+ Y GD +Q Sbjct: 1 MKKIAIFADVQNIYYTSRDAYKKSFNYRKLWQQIKEQGDICYAFAYAIDKGDRQQ----- 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 D L + GF++ K + + K DV + +D + + ++ +++ SGDG Sbjct: 56 QKFQDVLRHLGFEIKLKPYIQRCDGS----AKGDWDVGITIDIMQIAPRVDCIILLSGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163 F L+ + K+ + + V P + L F Sbjct: 112 DFAILLETV---NKRDKVETQVYGVPKYTAKALIDSCSVF 148 >gi|229592764|ref|YP_002874883.1| hypothetical protein PFLU5385 [Pseudomonas fluorescens SBW25] gi|229364630|emb|CAY52542.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25] Length = 158 Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats. Identities = 42/164 (25%), Positives = 72/164 (43%), Gaps = 13/164 (7%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIA+F D NLY + + A G +Y L SR ++ AY Y GD +QQ Sbjct: 1 MKKIAVFADVQNLYYTVRQAYGCHFNYAALWADISSRGQIVEAYAYAIDRGDSKQQQ--- 57 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + ++ K DV + +D + ++ ++ +V+ SGDG Sbjct: 58 --FQQILRNLGFTVKLKPYIQRSDGS----AKGDWDVGITIDIMDAADHVDEIVLASGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F L+ + K + + P + ++ L R A ++ + Sbjct: 112 DFDMLLDRIINK---HGVEAVAYGVPGLTANSLIRAASRYVPIE 152 >gi|15789664|ref|NP_279488.1| hypothetical protein VNG0419C [Halobacterium sp. NRC-1] gi|169235378|ref|YP_001688578.1| hypothetical protein OE1626F [Halobacterium salinarum R1] gi|10580028|gb|AAG18968.1| conserved hypothetical protein [Halobacterium sp. NRC-1] gi|167726444|emb|CAP13229.1| conserved hypothetical protein [Halobacterium salinarum R1] Length = 165 Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats. Identities = 42/171 (24%), Positives = 77/171 (45%), Gaps = 14/171 (8%) Query: 2 FDPREKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 P +++A+ D NLY S+++ +IDY LL + RA Y ++ Sbjct: 4 LQPAQRVAVLADSQNLYHSAQSVYSQNIDYAALLDKGVQDRELTRAIAYVIRAQSEDED- 62 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 D L GF+ K K F + K+ DV +++DA ++ ++ +V+ + Sbjct: 63 ----RFFDALRDIGFETKIKAIKTFGDGS----KKADWDVGMSLDAVSLADHIDTIVLCT 114 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 GDG F+ L L+ + +V +++ A+ +L AD F+DL+ Sbjct: 115 GDGDFSRLCRHLRHEGVRVEVMAF----EESAATELVDAADSFVDLSERTE 161 >gi|104783731|ref|YP_610229.1| hypothetical protein PSEEN4789 [Pseudomonas entomophila L48] gi|95112718|emb|CAK17446.1| conserved hypothetical protein [Pseudomonas entomophila L48] Length = 167 Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats. Identities = 45/172 (26%), Positives = 73/172 (42%), Gaps = 17/172 (9%) Query: 1 MFDPR----EKIALFIDGANLYASSKAL-GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGD 55 M+ R +KIALF D NLY + + + G +Y L ++ A Y GD Sbjct: 1 MYSTRCPGLKKIALFADVQNLYYTVRQVHGCHFNYTTLWAEVSREGQIVEAVAYAIDRGD 60 Query: 56 PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEH 115 +QQ L GF+V K + + K DV + +D E +E ++ Sbjct: 61 SKQQQ-----FQQILRNLGFEVRLKPYIQRADGS----AKGDWDVGITLDVIEAAERVDQ 111 Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 +V+ SGDG F L+ R K+ + + V P + + L R A ++ + Sbjct: 112 VVLASGDGDFDLLLE---RAAKRHGVETVVYGVPGLTALSLIRSASRYVPIE 160 >gi|312963199|ref|ZP_07777683.1| protein of unknown function DUF88 [Pseudomonas fluorescens WH6] gi|311282465|gb|EFQ61062.1| protein of unknown function DUF88 [Pseudomonas fluorescens WH6] Length = 158 Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats. Identities = 41/164 (25%), Positives = 71/164 (43%), Gaps = 13/164 (7%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIA+F D NLY + + A G +Y L +R ++ AY Y GD +QQ Sbjct: 1 MKKIAVFADVQNLYYTVRQAYGCHFNYAALWADISARGQIVEAYAYAIDRGDSKQQQ--- 57 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + + K DV + +D + ++ ++ +V+ SGDG Sbjct: 58 --FQQILRNLGFTVKLKPYIQRADGS----AKGDWDVGITLDIMDAADHVDEVVLASGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F L+ + K + + P + ++ L R A ++ + Sbjct: 112 DFDMLLERIIHK---HGVHAVAYGVPGLTANSLIRAASRYVPIE 152 >gi|28871798|ref|NP_794417.1| hypothetical protein PSPTO_4666 [Pseudomonas syringae pv. tomato str. DC3000] gi|28855050|gb|AAO58112.1| conserved protein of unknown function [Pseudomonas syringae pv. tomato str. DC3000] Length = 158 Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats. Identities = 40/164 (24%), Positives = 70/164 (42%), Gaps = 13/164 (7%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIA+F D NLY + + A G +Y L R ++ A+ Y GD +QQ Sbjct: 1 MKKIAVFADVQNLYYTVRQAYGCHFNYAALWADISKRGEIVHAFAYAIDRGDSKQQQ--- 57 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + ++ K DV + +D + + ++ +V+ SGDG Sbjct: 58 --FQQILRNLGFTVRLKPYIQRSDGS----AKGEWDVGITIDIMDFAPQVDEVVLASGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F L+ + K + + P + ++ L R A ++ + Sbjct: 112 DFDMLLDRVISK---HGVEAVAYGVPGLTANSLIRAASRYVPIE 152 >gi|289627587|ref|ZP_06460541.1| hypothetical protein PsyrpaN_21062 [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289649838|ref|ZP_06481181.1| hypothetical protein Psyrpa2_19118 [Pseudomonas syringae pv. aesculi str. 2250] gi|330870428|gb|EGH05137.1| hypothetical protein PSYAE_24882 [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 158 Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats. Identities = 40/164 (24%), Positives = 70/164 (42%), Gaps = 13/164 (7%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIA+F D NLY + + A G +Y L R ++ A+ Y GD +QQ Sbjct: 1 MKKIAVFADVQNLYYTVRQAHGCHFNYAALWADISKRGEIVHAFAYAIDRGDSKQQQ--- 57 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + ++ K DV + +D + + ++ +V+ SGDG Sbjct: 58 --FQQILRNLGFTVRLKPYIQRSDGS----AKGDWDVGITIDIMDFAPQVDEVVLASGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F L+ + K + + P + ++ L R A ++ + Sbjct: 112 DFDMLLERVISK---HDVEAVAYGVPGLTANSLIRAASRYVPIE 152 >gi|55377125|ref|YP_134975.1| hypothetical protein rrnAC0208 [Haloarcula marismortui ATCC 43049] gi|55229850|gb|AAV45269.1| unknown [Haloarcula marismortui ATCC 43049] Length = 165 Score = 154 bits (391), Expect = 4e-36, Method: Composition-based stats. Identities = 39/167 (23%), Positives = 76/167 (45%), Gaps = 14/167 (8%) Query: 3 DPREKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 P +++A+ D NLY ++++ +IDY LL+ + RA Y PE++ Sbjct: 5 QPGQRVAVLADAQNLYHTARSLYSRNIDYEALLEEAVDGRELTRAIAYVIRADSPEEE-- 62 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 + L GF+ K K F + K+ DV +++DA + ++ +V+ +G Sbjct: 63 ---SFFEALVDIGFETRIKDIKTFQDGS----KKADWDVGMSLDAVSLANHVDTVVLCTG 115 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 DG F + L+ + +V + +S+ L+ D F+D++ Sbjct: 116 DGDFARVCRYLRHEGCRVEAMGF----EESSSEDLKAAVDGFIDMSD 158 >gi|237801480|ref|ZP_04589941.1| hypothetical protein POR16_21831 [Pseudomonas syringae pv. oryzae str. 1_6] gi|331024339|gb|EGI04396.1| hypothetical protein POR16_21831 [Pseudomonas syringae pv. oryzae str. 1_6] Length = 158 Score = 154 bits (391), Expect = 4e-36, Method: Composition-based stats. Identities = 40/164 (24%), Positives = 70/164 (42%), Gaps = 13/164 (7%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIA+F D NLY + + A G +Y L R ++ A+ Y GD +QQ Sbjct: 1 MKKIAVFADVQNLYYTVRQAHGCHFNYAALWADISKRGEIVHAFAYAIDRGDSKQQQ--- 57 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + ++ K DV + +D + + ++ +V+ SGDG Sbjct: 58 --FQQILRNLGFTVRLKPYIQRSDGS----AKGDWDVGITIDIMDFAPQVDEVVLASGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F L+ + K + + P + ++ L R A ++ + Sbjct: 112 DFDMLLDRVISK---HGVAAVAYGVPGLTANSLIRAASRYVPIE 152 >gi|225850534|ref|YP_002730768.1| RtsE [Persephonella marina EX-H1] gi|225645811|gb|ACO03997.1| RtsE [Persephonella marina EX-H1] Length = 179 Score = 154 bits (391), Expect = 4e-36, Method: Composition-based stats. Identities = 47/177 (26%), Positives = 84/177 (47%), Gaps = 14/177 (7%) Query: 2 FDPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 +++A+F+D NLY S++ + +++ +L + +++RA Y + +Q Sbjct: 10 LYKNQRVAVFLDIQNLYYSARDSFNRKVNFESVLDKVLNGRVLVRAIAYLVKLQGVDQ-- 67 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFT--ENCG--RKRVKSSMDVELAVDAFEQSEGLEHL 116 ++ L + G+QV K K F + G +K+ D+ +A+DA +E ++ Sbjct: 68 ---KGFINTLKHIGYQVRVKEPKIFKRLDEYGNLWTTIKADWDMGIAMDAISLAEKIDVA 124 Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 V+ SGDG F LV L K KV I + A+ +L AD F+DL E+ Sbjct: 125 VLASGDGDFADLVRYLHTKGVKVEIAAF----KQTAAKELIEVADEFIDLTAFGEEV 177 >gi|328950408|ref|YP_004367743.1| Domain of unknown function DUF88 [Marinithermus hydrothermalis DSM 14884] gi|328450732|gb|AEB11633.1| Domain of unknown function DUF88 [Marinithermus hydrothermalis DSM 14884] Length = 186 Score = 154 bits (391), Expect = 4e-36, Method: Composition-based stats. Identities = 35/172 (20%), Positives = 73/172 (42%), Gaps = 10/172 (5%) Query: 2 FDPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 + P +++ +F+D NLY S++ +++ LL + ++RA Y + Sbjct: 7 WHPTQRVGVFVDTQNLYHSARDYYERTVNFASLLNYAVAGRQLVRATAYVVERDGDTSAW 66 Query: 61 SPLHPLLDWLHYNGFQVVAKVAK-EFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIF 119 P + L G++V + T + G+ + + D+ +A D L+ +V+ Sbjct: 67 ----PFIYKLSTIGYRVRRMTLQLHHTTDDGKPIYEGNWDMGIAADMVRLMHTLDVVVLG 122 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 SGDG F ++ L + +V +V+ + +L D F L + + Sbjct: 123 SGDGDFVEILEVLMERGIRVEVVAF----KETTAQKLIDAVDKFTHLPDIPD 170 >gi|87302148|ref|ZP_01084973.1| hypothetical protein WH5701_08104 [Synechococcus sp. WH 5701] gi|87283073|gb|EAQ75029.1| hypothetical protein WH5701_08104 [Synechococcus sp. WH 5701] Length = 260 Score = 154 bits (390), Expect = 5e-36, Method: Composition-based stats. Identities = 42/169 (24%), Positives = 83/169 (49%), Gaps = 12/169 (7%) Query: 10 LFIDGANLYASSKALGFDIDYRKLLKAFRS--RAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 + +DG ++ + + LG+ D R+LL+ + + AY+YT + +Q P Sbjct: 54 VIVDGHGMFYAQQKLGWFFDPRRLLELATADPGVELDGAYWYTGLKDPADQ-----RPFR 108 Query: 68 DWLHYNGFQVVAKVAKEF-TENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126 D L G+ V +K +EF + R+ ++++DVE+ +D + L+ + + SG Sbjct: 109 DALTSLGYTVRSKPLREFGADPEHRQFARANLDVEICLDLMMVAHRLDEVWLLSGSRDLE 168 Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 LV L+ K ++T++ + M +LR D F+DLA + ++ + Sbjct: 169 RLVETLRAKGIRITLL----NADGMVPRELRNAVDVFLDLAGRRKQLEK 213 >gi|313679721|ref|YP_004057460.1| hypothetical protein Ocepr_0830 [Oceanithermus profundus DSM 14977] gi|313152436|gb|ADR36287.1| protein of unknown function DUF88 [Oceanithermus profundus DSM 14977] Length = 184 Score = 154 bits (390), Expect = 5e-36, Method: Composition-based stats. Identities = 36/172 (20%), Positives = 75/172 (43%), Gaps = 10/172 (5%) Query: 2 FDPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 ++ +++ LF+D NLY S++ +++ LLK ++RA Y + + Sbjct: 7 WNAMQRVGLFVDTQNLYHSARDYYERTVNFESLLKRAVQGRQLVRATAYVVERENDTSAW 66 Query: 61 SPLHPLLDWLHYNGFQVV-AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIF 119 P + L G++V ++ T + G+ + + D+ +A D + L+ +V+ Sbjct: 67 ----PFIYKLSTMGYRVRRMNLSVHHTTDEGKPIYEGNWDMGIAADMVRLMDALDVVVLG 122 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 SGDG F ++ L K +V +++ + +L D F L + Sbjct: 123 SGDGDFVDILEVLMEKGIRVEVIAF----KETTAQKLIDAVDQFTHLPEIDE 170 >gi|330811889|ref|YP_004356351.1| hypothetical protein PSEBR_a4925 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379997|gb|AEA71347.1| Conserved hypothetical protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 159 Score = 154 bits (390), Expect = 5e-36, Method: Composition-based stats. Identities = 41/164 (25%), Positives = 73/164 (44%), Gaps = 13/164 (7%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIA+F D NLY + + A G +Y L + ++ AY Y GD +QQ Sbjct: 1 MKKIAVFADVQNLYYTVRQAYGCHFNYAALWADVSKQGQIVEAYAYAIDRGDSKQQQ--- 57 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + ++ K DV + +D + ++ ++ +V+ SGDG Sbjct: 58 --FQQILRNLGFIVKLKPYIQRSDGS----AKGDWDVGITLDIMDAADHVDEVVLASGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F L+ R ++K + + P + ++ L R A ++ + Sbjct: 112 DFDMLLE---RIIQKHGVQAVAYGVPGLTANSLIRAASRYVPIE 152 >gi|46199000|ref|YP_004667.1| hypothetical protein TTC0692 [Thermus thermophilus HB27] gi|46196624|gb|AAS81040.1| hypothetical conserved protein [Thermus thermophilus HB27] Length = 180 Score = 154 bits (389), Expect = 7e-36, Method: Composition-based stats. Identities = 35/182 (19%), Positives = 74/182 (40%), Gaps = 11/182 (6%) Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 +++ +F+D NLY S++ ++++ LL+ ++RA Y + Sbjct: 8 YQEQRVGVFVDTQNLYHSARDYYERNVNFESLLRFAVGGRRLVRATAYVVEKEGDTSAW- 66 Query: 62 PLHPLLDWLHYNGFQVVAK-VAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 P + L G++V + + T GR + D+ +A D L+ +V+ S Sbjct: 67 ---PFIYKLSTIGYKVRRMYLTVKETGEGGRPIYSGNWDMGIAADMVRLMPYLDVVVLGS 123 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F ++ L + +V +++ + +L D F L + +P Sbjct: 124 GDGDFVEILEVLMERGIRVEVIAF----RETTAQRLIDAVDRFTHLPEIPGAFM-EPRSP 178 Query: 181 KK 182 ++ Sbjct: 179 ER 180 >gi|89072963|ref|ZP_01159510.1| hypothetical protein SKA34_12125 [Photobacterium sp. SKA34] gi|90578998|ref|ZP_01234808.1| hypothetical protein VAS14_04813 [Vibrio angustum S14] gi|89051181|gb|EAR56637.1| hypothetical protein SKA34_12125 [Photobacterium sp. SKA34] gi|90439831|gb|EAS65012.1| hypothetical protein VAS14_04813 [Vibrio angustum S14] Length = 159 Score = 154 bits (389), Expect = 7e-36, Method: Composition-based stats. Identities = 41/166 (24%), Positives = 70/166 (42%), Gaps = 15/166 (9%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 EK+A+F+D N+Y + K + DY +I AY Y GD +Q Sbjct: 1 MEKVAIFVDVQNIYYTVKEKYRANFDYNAFWAEVSQDREIIAAYAYAIHKGDEKQ----- 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 + L GF+V K + ++ K DV + +D E ++ + +++ SGDG Sbjct: 56 RQFQNILRAIGFEVKLKPFIQRSDGS----AKGDWDVGITLDVIEHAQDADRIILLSGDG 111 Query: 124 CFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F LV +Q K KV + P + + L A ++ ++ Sbjct: 112 DFDLLVDKVQTKYNTKVEV----YGVPGLTATSLINTATHYREIED 153 >gi|260769223|ref|ZP_05878156.1| hypothetical protein VFA_002281 [Vibrio furnissii CIP 102972] gi|260614561|gb|EEX39747.1| hypothetical protein VFA_002281 [Vibrio furnissii CIP 102972] gi|315181763|gb|ADT88676.1| hypothetical protein vfu_B00438 [Vibrio furnissii NCTC 11218] Length = 157 Score = 153 bits (388), Expect = 8e-36, Method: Composition-based stats. Identities = 39/165 (23%), Positives = 72/165 (43%), Gaps = 15/165 (9%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 E IA+ +D N+Y + K +Y + + V++A Y D Q+ Sbjct: 1 METIAILVDVQNVYYTCKERYQRHFNYNHFWQQVTNGRHVVKANAYAIASNDSRQR--QF 58 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 H +L + GF+V+ K + ++ K DV + +DA E + ++ +V+ SGDG Sbjct: 59 HHILRGI---GFEVMLKPYIQRSDGS----AKGDWDVGITLDAIELAPDVDTVVLVSGDG 111 Query: 124 CFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F L +Q K K+V + P + + L A+ ++ + Sbjct: 112 DFDILAKRIQDKYGKQVEV----YGVPGLTARSLVDAANRYVTIE 152 >gi|288817663|ref|YP_003432010.1| hypothetical protein HTH_0343 [Hydrogenobacter thermophilus TK-6] gi|288787062|dbj|BAI68809.1| hypothetical protein HTH_0343 [Hydrogenobacter thermophilus TK-6] gi|308751261|gb|ADO44744.1| protein of unknown function DUF88 [Hydrogenobacter thermophilus TK-6] Length = 199 Score = 153 bits (388), Expect = 9e-36, Method: Composition-based stats. Identities = 46/179 (25%), Positives = 79/179 (44%), Gaps = 17/179 (9%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE------- 57 E++ +FIDG+NL+ + + L IDY+KL+ +IRAY+Y + + + Sbjct: 3 DERVIIFIDGSNLFHAIRYLNIRIDYQKLVDFLTEGRRLIRAYFYGAMPHEKDVKKNTPE 62 Query: 58 -QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLE 114 + L+ L G +V K+ + V+ +D+ LA D + + Sbjct: 63 WESLLRQKRFLEELSLMGIKVKTAHLKKLPSG---EYVEKEVDIMLATDMLSMAYMNTYD 119 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 V+ SGD ++ V +QR KKV S + +S QLR+ D F+ L + Sbjct: 120 TAVLISGDSDYSYTVEEVQRIGKKVENASFKRT----SSYQLRKACDRFILLDDYLDRF 174 >gi|146308745|ref|YP_001189210.1| hypothetical protein Pmen_3730 [Pseudomonas mendocina ymp] gi|145576946|gb|ABP86478.1| protein of unknown function DUF88 [Pseudomonas mendocina ymp] Length = 159 Score = 153 bits (388), Expect = 9e-36, Method: Composition-based stats. Identities = 41/164 (25%), Positives = 69/164 (42%), Gaps = 14/164 (8%) Query: 5 REKIALFIDGANLYASSKAL-GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIA+F D NLY + + + G DY L R ++ AY Y GD +QQ Sbjct: 1 MKKIAVFADVQNLYYTVRQVHGCHFDYSVLWAEVSRRGVIAEAYAYAIDRGDAKQQQ--- 57 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + + K DV + +D + E ++ +V+ SGDG Sbjct: 58 --FQQILRKLGFTVKLKPYIQRADGS----AKGDWDVGITIDVLDALERVDEIVLASGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F L+ ++ + + + P + + L R A ++ + Sbjct: 112 DFDLLLERVRSRG----VEAIAFGVPGLTAQSLIRAASLYVPIE 151 >gi|163785396|ref|ZP_02180018.1| hypothetical protein HG1285_09231 [Hydrogenivirga sp. 128-5-R1-1] gi|159879334|gb|EDP73216.1| hypothetical protein HG1285_09231 [Hydrogenivirga sp. 128-5-R1-1] Length = 186 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 46/174 (26%), Positives = 80/174 (45%), Gaps = 15/174 (8%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP-----EQQ 59 EKIA+FID N++ +S I+Y+KL++ R ++RAY+YT V ++Q Sbjct: 21 DEKIAIFIDAGNMFHASNYYKIKINYKKLVEFLRRDRWLLRAYFYTGVPTQDLDKSLKEQ 80 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLV 117 + L+ L G +V K+ E ++ +DV LA D + + + Sbjct: 81 WKKQKGFLNELQNLGIKVKTMPLKKTPEG----FIEKGVDVLLATDMVSLAFRNAYDTAI 136 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 + SGD + +V +Q K+V S + +S +LR+ D F+ L + Sbjct: 137 LVSGDSDYVPVVEEIQELGKRVENASFKRT----SSFELRKVCDRFILLDNFMD 186 >gi|119476672|ref|ZP_01616982.1| hypothetical protein GP2143_03548 [marine gamma proteobacterium HTCC2143] gi|119449928|gb|EAW31164.1| hypothetical protein GP2143_03548 [marine gamma proteobacterium HTCC2143] Length = 158 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 40/165 (24%), Positives = 73/165 (44%), Gaps = 15/165 (9%) Query: 5 REKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 EK+A+F+D N+Y +++ + DY K S V++A Y T GD +Q Sbjct: 1 MEKVAIFVDVQNVYYTTRQTFRKNFDYNKFWLKACSSREVVKAIAYATDRGDQKQ----- 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 H + L GF+V K + ++ K DV + +D E ++ + +++ SGDG Sbjct: 56 HEFQNILRAIGFEVKLKPFIQRSDGS----AKGDWDVGITIDIMECADDVAVVILVSGDG 111 Query: 124 CFTTLVAALQ-RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F L ++ + K+V + + + L A F+ + Sbjct: 112 DFDLLAQKIRVERGKRVEV----YGVAQLTAKSLINAATEFIPID 152 >gi|239996208|ref|ZP_04716732.1| hypothetical protein AmacA2_17270 [Alteromonas macleodii ATCC 27126] Length = 153 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 38/164 (23%), Positives = 74/164 (45%), Gaps = 14/164 (8%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 K + +D N+Y + + A + +Y + + + A+ Y GD +Q Sbjct: 1 MNKALVLVDVQNVYYTCRQAYKRNFNYNQFWRELTYNLDIAHAFAYAIDRGDSKQ----- 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 + L GF+V K + + K DV + VDA E ++ ++ +++ SGDG Sbjct: 56 REFQNILRAIGFEVKLKPFIQRADGS----AKGDWDVGITVDALEHADDVDEIILVSGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F LV AL+ K K VT+ P++ ++ +++ A ++ + Sbjct: 112 DFDILVNALKAKGKTVTV----YGVPALTAESIQKVASKYVPID 151 >gi|288818569|ref|YP_003432917.1| hypothetical protein HTH_1263 [Hydrogenobacter thermophilus TK-6] gi|288787969|dbj|BAI69716.1| hypothetical protein HTH_1263 [Hydrogenobacter thermophilus TK-6] gi|308752160|gb|ADO45643.1| protein of unknown function DUF88 [Hydrogenobacter thermophilus TK-6] Length = 165 Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 13/176 (7%) Query: 5 REKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +++ +FIDGAN Y K L ID KL++ F+ + ++Y E+Q Sbjct: 2 KKRAGIFIDGANFYFIQKHILHQKIDLIKLVEYFKRDYTIYNTFFYLAYREGDEKQ---- 57 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 + L ++G VV K K+ + K S+DV++A+D + + V+ SGD Sbjct: 58 ENFIKLLAFSGITVVKKPIKQLKDG----TYKGSLDVDMALDVLLTKDNYDVAVLCSGDS 113 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 F LV L+ K+V VST +S +L D ++DLA + I + E Sbjct: 114 DFERLVWVLRDFSKEVICVST----KESSSVELVNACDRYIDLADIMPYIKLEERE 165 >gi|55981026|ref|YP_144323.1| hypothetical protein TTHA1057 [Thermus thermophilus HB8] gi|55772439|dbj|BAD70880.1| conserved hypothetical protein [Thermus thermophilus HB8] Length = 180 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 34/181 (18%), Positives = 73/181 (40%), Gaps = 10/181 (5%) Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 +++ +F+D NLY S++ ++++ LL+ ++RA Y + Sbjct: 8 YQEQRVGVFVDTQNLYHSARDYYERNVNFESLLRFAVGGRRLVRATAYVVEKEGDTSAW- 66 Query: 62 PLHPLLDWLHYNGFQVVAK-VAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 P + L G++V + + T GR + D+ +A D L+ +V+ S Sbjct: 67 ---PFIYKLSTIGYKVRRMYLTVKETGEGGRPIYSGNWDMGIAADMVRLMPYLDVVVLGS 123 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F ++ L + +V +++ + +L D F L + + + Sbjct: 124 GDGDFVEILEVLMERGIRVEVIAF----RETTAQRLIDAVDRFTHLPEIPGAFMEPKNAE 179 Query: 181 K 181 + Sbjct: 180 R 180 >gi|313680485|ref|YP_004058224.1| hypothetical protein Ocepr_1598 [Oceanithermus profundus DSM 14977] gi|313153200|gb|ADR37051.1| protein of unknown function DUF88 [Oceanithermus profundus DSM 14977] Length = 189 Score = 151 bits (383), Expect = 3e-35, Method: Composition-based stats. Identities = 38/172 (22%), Positives = 80/172 (46%), Gaps = 16/172 (9%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 +++ALFIDG+ +Y +K +G+++D+RK+++ F S + A+YY + +++ Sbjct: 1 MDRLALFIDGSFVYNCAKRMGWNVDHRKVIEHFPSGFALFNAFYYAPITDWNDER---QQ 57 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 LD L + G+ V ++ + S + +A D + + ++ SG Sbjct: 58 KFLDALIFMGYSVRSREVRGEA---------PSFEAHIATDLLITAPRWDVALLASGAAQ 108 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 V A++ K+V ++ P + +R D F+DL + + R+ Sbjct: 109 LVPAVEAVRTMGKEVHLL----GIPELVDLDIRSATDRFIDLKEYRELLERE 156 >gi|195953366|ref|YP_002121656.1| protein of unknown function DUF88 [Hydrogenobaculum sp. Y04AAS1] gi|195932978|gb|ACG57678.1| protein of unknown function DUF88 [Hydrogenobaculum sp. Y04AAS1] Length = 195 Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats. Identities = 46/184 (25%), Positives = 85/184 (46%), Gaps = 15/184 (8%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE------Q 58 +EK+ +FIDG+N++ K F +DY KL++ ++RAY+Y+ + D + + Sbjct: 3 KEKLVIFIDGSNVFHGLKNETFRLDYLKLIEFLTGDRYLVRAYFYSALPSDKDVDKQSKE 62 Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHL 116 F+ L+ L + G +V ++ + ++ +D+ LA D + + Sbjct: 63 GFNKQKKFLEDLAFMGIKVKLAKLRKLPDGN---FLEKEVDIMLATDMLSLAYKNAYDSC 119 Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 V+ SGD F+ V A+Q K+V + + +S LRR D F+ L ++ Sbjct: 120 VLVSGDSDFSYTVEAVQFLGKRVENATFKKT----SSYSLRRLCDKFIYLDDHLDKFLLK 175 Query: 177 PDED 180 P E Sbjct: 176 PKEP 179 >gi|219883176|ref|YP_002478338.1| protein of unknown function DUF88 [Cyanothece sp. PCC 7425] gi|219867301|gb|ACL47639.1| protein of unknown function DUF88 [Cyanothece sp. PCC 7425] Length = 356 Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats. Identities = 43/165 (26%), Positives = 77/165 (46%), Gaps = 12/165 (7%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 +A+ +D AN+Y LG ++Y +L+ ++ + ++YT + L Sbjct: 188 LAILVDAANIYHCGNELGVKVNYDQLIPGLQAGFESSQVWFYTGLKSGD----FRQQRFL 243 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTT 127 L G+QVV K + + K+++DVELA++ + +E +++ SGDG Sbjct: 244 ASLRQQGYQVVTKRVVRHEDG----KEKANLDVELALEMVKLAERYSDILLLSGDGDLAC 299 Query: 128 LVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 V A ++K +V ++S S S L R AD F DL + + Sbjct: 300 AVRAARQKGARVEVISF----RSRTSQDLIRAADDFRDLTDMVDR 340 >gi|257051312|ref|YP_003129145.1| protein of unknown function DUF88 [Halorhabdus utahensis DSM 12940] gi|256690075|gb|ACV10412.1| protein of unknown function DUF88 [Halorhabdus utahensis DSM 12940] Length = 165 Score = 150 bits (380), Expect = 6e-35, Method: Composition-based stats. Identities = 42/167 (25%), Positives = 79/167 (47%), Gaps = 14/167 (8%) Query: 3 DPREKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 P +++A+ D NLY ++++ +IDY +LL A + RA Y +++ Sbjct: 5 HPGQRVAVLADSQNLYHTAQSLYQQNIDYGELLDAAVRDRQLTRAIAYVIRADADDEE-- 62 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 D L GF+ AK K F + K+ DV +++DA + ++ + + +G Sbjct: 63 ---RFFDALEDIGFETKAKDIKTFADGS----KKADWDVGMSLDAVTLAPHVDTIALCTG 115 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 DG F LV ++ + +V ++S S S++L A+ + DL+ Sbjct: 116 DGDFARLVTHVRHEGVRVEVLSFGES----TSEELLDVAEDYTDLSE 158 >gi|15605927|ref|NP_213304.1| hypothetical protein aq_430 [Aquifex aeolicus VF5] gi|2983099|gb|AAC06705.1| hypothetical protein aq_430 [Aquifex aeolicus VF5] Length = 183 Score = 150 bits (380), Expect = 6e-35, Method: Composition-based stats. Identities = 45/168 (26%), Positives = 74/168 (44%), Gaps = 13/168 (7%) Query: 8 IALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 A+F+DG NLY K L ID K + F+ + ++Y + E+Q Sbjct: 26 AAIFVDGTNLYFIQKNFLNAKIDIVKFVNYFKQFYDIYNTFFYLAYKEEDEKQ----ERF 81 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126 L ++G VV K K+ + +K +DV++A+D + + ++ SGD F Sbjct: 82 FKLLAFSGITVVKKPVKQLKDGS----LKGDVDVDIAIDMLLTKDNYDTAILCSGDSDFE 137 Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 LV L+ K+V VST +S +L D ++DL + I Sbjct: 138 RLVYVLRNFGKEVICVST----KESSSIELVNACDRYIDLKEILPFIK 181 >gi|71278570|ref|YP_266902.1| hypothetical protein CPS_0134 [Colwellia psychrerythraea 34H] gi|71144310|gb|AAZ24783.1| conserved hypothetical protein [Colwellia psychrerythraea 34H] Length = 157 Score = 150 bits (380), Expect = 7e-35, Method: Composition-based stats. Identities = 37/158 (23%), Positives = 69/158 (43%), Gaps = 13/158 (8%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIA+F+D N+Y +++ +YR L + ++ + A Y D +Q Sbjct: 1 MKKIAVFVDVQNIYYTTRDTYAKQFNYRLLWQELMAQGEITIANAYAIQRSDDQQ----- 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 H L + GF V K + ++ K DV + +D E + ++ +++ SGDG Sbjct: 56 HKFQKALKHIGFDVKLKPYIQRSDGS----AKGDWDVGITIDIMEAAAEVDTVILLSGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161 F L+ ++ K + + V S + + L AD Sbjct: 112 DFDLLLRKVREK---YGVSTEVYSVEKLTAKSLVEAAD 146 >gi|114562206|ref|YP_749719.1| hypothetical protein Sfri_1028 [Shewanella frigidimarina NCIMB 400] gi|114333499|gb|ABI70881.1| protein of unknown function DUF88 [Shewanella frigidimarina NCIMB 400] Length = 157 Score = 150 bits (380), Expect = 7e-35, Method: Composition-based stats. Identities = 41/161 (25%), Positives = 70/161 (43%), Gaps = 13/161 (8%) Query: 8 IALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 +A+F+D N+Y + K G +YR L K ++ + A Y D Q Sbjct: 4 LAVFVDVQNIYYTCKQGFGRSFNYRALYKHLSAQGCISHAIAYAIAPADDGQV-----KF 58 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126 D L + GF V K + ++ K DV + +D E + ++ +++ SGDG F Sbjct: 59 QDALKHIGFTVKTKPYIQRSDGS----AKGDWDVGITIDMLEIAPTVDEVILLSGDGDFD 114 Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 L L++ + T + VLS + + L QA +F + Sbjct: 115 LL---LKKINQTTTCYTHVLSVERLTAKSLTDQAQHFTAID 152 >gi|163782630|ref|ZP_02177627.1| hypothetical protein HG1285_17140 [Hydrogenivirga sp. 128-5-R1-1] gi|159882203|gb|EDP75710.1| hypothetical protein HG1285_17140 [Hydrogenivirga sp. 128-5-R1-1] Length = 198 Score = 150 bits (380), Expect = 8e-35, Method: Composition-based stats. Identities = 45/181 (24%), Positives = 78/181 (43%), Gaps = 17/181 (9%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE----- 57 E++ +FIDG+NL+ + L IDY +L+ R ++RAY+YT V D + Sbjct: 1 MNEERLMIFIDGSNLFHGIRYLNIKIDYGRLVDFLRESRRLVRAYFYTAVPQDRDVKKGT 60 Query: 58 ---QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EG 112 + LD L +G +V ++ + ++ +D+ LA D + Sbjct: 61 PEWESLIRQKRFLDELALSGIKVKLAKLRKLPSG---EFIEKEVDIMLATDMLSLAFQNA 117 Query: 113 LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 + V+ SGD F V +QR K+V + + +S LR+ D F+ L + Sbjct: 118 YDTAVLVSGDSDFIYTVEEIQRIGKRVENATFKKT----SSYNLRKTCDRFVLLDNFLDR 173 Query: 173 I 173 Sbjct: 174 F 174 >gi|108805593|ref|YP_645530.1| hypothetical protein Rxyl_2805 [Rubrobacter xylanophilus DSM 9941] gi|108766836|gb|ABG05718.1| protein of unknown function DUF88 [Rubrobacter xylanophilus DSM 9941] Length = 189 Score = 150 bits (379), Expect = 9e-35, Method: Composition-based stats. Identities = 53/185 (28%), Positives = 87/185 (47%), Gaps = 12/185 (6%) Query: 4 PREKIALFIDGANLYASSKAL-GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGD-PEQQFS 61 E++A+F+DGANLY S K+ G +DY +LL+A + ++RA +Y + EQ S Sbjct: 5 SDERVAVFVDGANLYHSIKSYYGGVLDYGRLLEAAVAGRRLLRATFYLVEKQEADEQVAS 64 Query: 62 PLHPLLDWLHYNGFQVVAKVA-KEFTENCGRKRV---KSSMDVELAVDAFEQSEGLEHLV 117 + L+ G++V +K T G +RV K DV + VD ++ + V Sbjct: 65 STRSFVYNLNRFGYKVRSKPLTVHETTTPGVERVVSHKGDWDVGIVVDMIRLADHADTYV 124 Query: 118 IFSGDGCFTTLVAALQ-RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI-AR 175 + SGDG + +V LQ + +V ++S + L D + DL + + R Sbjct: 125 LVSGDGDYVEVVDYLQTERGLRVEVISAAQC----TAQALFDVCDRYTDLGEIPDLFRER 180 Query: 176 DPDED 180 P D Sbjct: 181 GPLRD 185 >gi|220910751|ref|YP_002486061.1| protein of unknown function DUF88 [Cyanothece sp. PCC 7425] gi|219867523|gb|ACL47860.1| protein of unknown function DUF88 [Cyanothece sp. PCC 7425] Length = 343 Score = 150 bits (379), Expect = 9e-35, Method: Composition-based stats. Identities = 50/165 (30%), Positives = 80/165 (48%), Gaps = 12/165 (7%) Query: 9 ALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLD 68 A+FID ANL S++ L +DY+K+ + R ++YT +Q LD Sbjct: 171 AIFIDAANLEYSARDLNLQLDYQKIYRFLTKGMKQPRVFFYTGERPGDARQKKQ----LD 226 Query: 69 WLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTL 128 WL G+Q+V K K+++DVELA+D + ++ L V+ SGDG FT Sbjct: 227 WLTGIGYQLVTKKIVRQPGG----TEKANLDVELALDMYRLADTLSRAVLVSGDGDFTQA 282 Query: 129 VAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 + L+++ V ++S S S L + A+ ++DL EI Sbjct: 283 LQLLKQQGIAVDVISF----RSCTSKALIKAANRYIDLEQRTAEI 323 >gi|88859966|ref|ZP_01134605.1| hypothetical protein PTD2_18180 [Pseudoalteromonas tunicata D2] gi|88817960|gb|EAR27776.1| hypothetical protein PTD2_18180 [Pseudoalteromonas tunicata D2] Length = 157 Score = 150 bits (379), Expect = 9e-35, Method: Composition-based stats. Identities = 39/158 (24%), Positives = 72/158 (45%), Gaps = 15/158 (9%) Query: 8 IALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 +A+F+D N+Y + + A + +Y + + V A+ Y D +Q+ Sbjct: 4 LAIFVDVQNVYYTCRQAYQANFNYNQFWREATEGYDVSYAFAYAIGRSDEKQKQ-----F 58 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126 + L GF++ K + ++ K DV + +D + ++ ++ L++ SGDG F Sbjct: 59 QNILRAIGFEIKLKPYIQRSDGS----AKGDWDVGITIDMMDYAQSVDKLILVSGDGDFA 114 Query: 127 TLVAALQRKVKK-VTIVSTVLSDPSMASDQLRRQADYF 163 LV +Q K K V + P++ SD L R A +F Sbjct: 115 MLVDRIQNKYDKPVEV----YGVPTLTSDSLIRSAKHF 148 >gi|26991450|ref|NP_746875.1| hypothetical protein PP_4769 [Pseudomonas putida KT2440] gi|148549846|ref|YP_001269948.1| hypothetical protein Pput_4644 [Pseudomonas putida F1] gi|24986525|gb|AAN70339.1|AE016675_9 conserved hypothetical protein [Pseudomonas putida KT2440] gi|148513904|gb|ABQ80764.1| protein of unknown function DUF88 [Pseudomonas putida F1] Length = 159 Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 42/165 (25%), Positives = 70/165 (42%), Gaps = 15/165 (9%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIALF D NLY + + A G +Y L ++ A Y GD +QQ Sbjct: 1 MKKIALFADVQNLYYTVRQAHGCHFNYTALWADVSREGQIVEAVAYAIDRGDSKQQQ--- 57 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF+V K + ++ K DV + +D + + ++ +V+ SGDG Sbjct: 58 --FQQILRNLGFEVRLKPFIQRSDGS----AKGDWDVGITLDVIDAASRVDQVVLASGDG 111 Query: 124 CFTTLVA-ALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F L+ +QR + + V P + + L R A ++ + Sbjct: 112 DFDLLLERVIQRHGTE----AVVYGVPGLTALSLIRAATRYVPIE 152 >gi|320334669|ref|YP_004171380.1| hypothetical protein Deima_2072 [Deinococcus maricopensis DSM 21211] gi|319755958|gb|ADV67715.1| Domain of unknown function DUF88 [Deinococcus maricopensis DSM 21211] Length = 182 Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 71/167 (42%), Gaps = 10/167 (5%) Query: 5 REKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 + ++ +FID NLY S++ +++ +LL+ ++RA Y Sbjct: 7 KPRVGVFIDTQNLYHSARDLYERTVNFERLLQYATEGRELVRAVSYVVEREGEGTA---- 62 Query: 64 HPLLDWLHYNGFQVVAKVAK-EFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122 P + L G++V + T G+ + + D+ + D + L+ +V+ SGD Sbjct: 63 RPFIYKLSTIGYKVRRMTLQLHHTNEQGKAIWEGNWDMGIVADMTRLLDHLDVIVLGSGD 122 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 G FT +V Q + +V +++ + +L D + + + + Sbjct: 123 GDFTDMVEVFQERGVRVEVIAF----REHTAQKLVDACDRYTNWSDV 165 >gi|170719838|ref|YP_001747526.1| hypothetical protein PputW619_0652 [Pseudomonas putida W619] gi|169757841|gb|ACA71157.1| protein of unknown function DUF88 [Pseudomonas putida W619] Length = 159 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 15/165 (9%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIALF D NLY + + A G +Y L ++ A Y GD +QQ Sbjct: 1 MKKIALFADVQNLYYTVRQAHGCHFNYTALWSEVSREGEIVEAVAYAIDRGDSKQQQ--- 57 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + ++ K DV + +D + + ++ +V+ SGDG Sbjct: 58 --FQQILRNLGFDVRLKPFIQRSDGS----AKGDWDVGITLDVIDAASRVDQVVLASGDG 111 Query: 124 CFTTLVA-ALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F L+ +QR + + V P + + L R A ++ + Sbjct: 112 DFDLLLERVIQRHGAE----AVVYGVPGLTAMSLIRAASRYVPIE 152 >gi|76802672|ref|YP_330767.1| hypothetical protein NP4076A [Natronomonas pharaonis DSM 2160] gi|76558537|emb|CAI50129.1| conserved hypothetical protein [Natronomonas pharaonis DSM 2160] Length = 165 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 39/172 (22%), Positives = 75/172 (43%), Gaps = 14/172 (8%) Query: 3 DPREKIALFIDGANLYASSKAL-GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 +++A+ D NLY ++ + + DY +LL A +IRA Y P +Q Sbjct: 5 HSNQRVAVLADSQNLYHTAHSYYSRNPDYTELLSAAVRDRELIRAIAYVIRADPPTEQE- 63 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 + L GF+ K K F + K++ D+ + +DA + ++ V+ SG Sbjct: 64 ----FFEALRDIGFETKIKDIKTFADG----TQKANWDLGMCLDAVTLAPKIDTFVLASG 115 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 DG F L L+ + + + S +++L AD ++D++ ++ Sbjct: 116 DGDFARLCTHLRHEGVRTEVFGFGDS----TAEELIDAADSYVDMSEDEDRF 163 >gi|197335397|ref|YP_002155926.1| hypothetical protein VFMJ11_1205 [Vibrio fischeri MJ11] gi|197316887|gb|ACH66334.1| conserved hypothetical protein [Vibrio fischeri MJ11] Length = 157 Score = 148 bits (375), Expect = 3e-34, Method: Composition-based stats. Identities = 38/166 (22%), Positives = 68/166 (40%), Gaps = 15/166 (9%) Query: 5 REKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 + +A+ +D N+Y +++ DY L V+ A Y D +Q+ Sbjct: 1 MKTVAILVDVQNIYYTTRDVYQRHFDYNALWAKVTEGRTVVGANAYAIARSDDKQKQ--- 57 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 + L GF V K + + K DV + +DA E +E + +V+ SGDG Sbjct: 58 --FHNILRGIGFDVKLKPFIQRRDGS----AKGDWDVGITLDAIELAEQADIVVLLSGDG 111 Query: 124 CFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F L+ +Q + K+V + + ++ L AD F+ + Sbjct: 112 DFDLLIKRIQSRFNKEVEV----YGVADLTANSLIDAADRFIPIED 153 >gi|307824132|ref|ZP_07654359.1| protein of unknown function DUF88 [Methylobacter tundripaludum SV96] gi|307734916|gb|EFO05766.1| protein of unknown function DUF88 [Methylobacter tundripaludum SV96] Length = 157 Score = 148 bits (375), Expect = 3e-34, Method: Composition-based stats. Identities = 37/165 (22%), Positives = 69/165 (41%), Gaps = 13/165 (7%) Query: 5 REKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 EK+A+F+D N+Y ++K +Y + VI A+ Y GD +Q Sbjct: 1 MEKVAIFVDVQNIYYTTKQSYRRHFNYTAFWSQATADREVIAAFAYAIDKGDCKQ----- 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF+V K + ++ K DV + +DA + + ++ +++ SGDG Sbjct: 56 QGFQQVLRNIGFEVKLKPYIQRSDGS----AKGDWDVGITLDAIDYAAKVDVIILLSGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F L+ + + + V P++ + L A F+ + Sbjct: 112 DFDLLLDKARNI---YGVTTEVYGVPALTAPSLINSAGRFIAIDD 153 >gi|88796999|ref|ZP_01112589.1| hypothetical protein MED297_19237 [Reinekea sp. MED297] gi|88779868|gb|EAR11053.1| hypothetical protein MED297_19237 [Reinekea sp. MED297] Length = 159 Score = 148 bits (375), Expect = 3e-34, Method: Composition-based stats. Identities = 38/163 (23%), Positives = 72/163 (44%), Gaps = 15/163 (9%) Query: 8 IALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 +A+ +D N+Y +++ A + DY + + ++ A Y GD +Q+ Sbjct: 4 VAILVDVQNVYYTTRHAFRRNFDYNRFWAQVSEQGTIVLANAYAVDRGDEKQKQ-----F 58 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126 + L GF V K + + K DV + +DA + ++ + +V+ +GDG FT Sbjct: 59 QNILRAIGFNVKLKPFIQRADGS----AKGDWDVGITIDALDAAQLADTVVLVTGDGDFT 114 Query: 127 TLVAALQR-KVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 LV L+ ++V + PS+ + L AD F+ + Sbjct: 115 ILVDKLRNDLDRRVEV----YGVPSLTAKSLMDAADAFIPIDD 153 >gi|209694823|ref|YP_002262751.1| hypothetical protein VSAL_I1288 [Aliivibrio salmonicida LFI1238] gi|208008774|emb|CAQ78973.1| conserved hypothetical protein [Aliivibrio salmonicida LFI1238] Length = 157 Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats. Identities = 41/165 (24%), Positives = 69/165 (41%), Gaps = 15/165 (9%) Query: 5 REKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 + +A+ +D N+Y +++ DY L V+ A Y D +Q+ Sbjct: 1 MKTVAILVDVQNIYYTTRDVYQRHFDYNALWAKVTDGRKVVGANAYAIARSDDKQKQ--- 57 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 + L GF V K + + K DV +A+DA E +E + +VI SGDG Sbjct: 58 --FHNILRGIGFDVKLKPFIQRRDGS----AKGDWDVGIALDAIELAEQADIVVILSGDG 111 Query: 124 CFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F LV +Q + K+V + + ++ L AD F+ + Sbjct: 112 DFELLVQRIQSRFNKEVEV----YGVADLTANALIDAADRFIPIE 152 >gi|149190237|ref|ZP_01868512.1| hypothetical protein VSAK1_15107 [Vibrio shilonii AK1] gi|148835984|gb|EDL52946.1| hypothetical protein VSAK1_15107 [Vibrio shilonii AK1] Length = 174 Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats. Identities = 45/166 (27%), Positives = 74/166 (44%), Gaps = 15/166 (9%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 E IA+F+D N+Y +++ A G DY L + A Y DP+Q Sbjct: 16 MESIAIFVDVQNVYYTTRQAFGRRFDYNALWAKLSQSYRIDIARAYAISSTDPKQ----- 70 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + + K DV LA+D +E + ++ +V+ SGDG Sbjct: 71 RQFHHILRGIGFNVQLKPFIQRLDGS----AKGDWDVGLALDVYETANSVDRIVLISGDG 126 Query: 124 CFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F LV +Q++ KVT+ S+ ++ L + AD ++++ Sbjct: 127 DFQVLVERIQQRFNTKVTVA----GVRSLTANNLIQAADDYIEIDS 168 >gi|325271797|ref|ZP_08138266.1| hypothetical protein G1E_03075 [Pseudomonas sp. TJI-51] gi|324103068|gb|EGC00446.1| hypothetical protein G1E_03075 [Pseudomonas sp. TJI-51] Length = 159 Score = 147 bits (373), Expect = 4e-34, Method: Composition-based stats. Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 15/165 (9%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIALF D NLY + + A G +Y L ++ A Y GD +QQ Sbjct: 1 MKKIALFADVQNLYYTVRQAHGCHFNYTALWADVCREGQIVEAVAYAIDRGDSKQQQ--- 57 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + ++ K DV + +D + + ++ +V+ SGDG Sbjct: 58 --FQQILRNLGFDVRLKPFIQRSDGS----AKGDWDVGITLDVIDAASRVDQVVLASGDG 111 Query: 124 CFTTLVA-ALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F L+ +QR + + V P + + L R A ++ + Sbjct: 112 DFDLLLERVIQRHGTE----AVVYGVPGLTALSLIRAASRYVPIE 152 >gi|149913285|ref|ZP_01901818.1| hypothetical protein RAZWK3B_08291 [Roseobacter sp. AzwK-3b] gi|149812405|gb|EDM72234.1| hypothetical protein RAZWK3B_08291 [Roseobacter sp. AzwK-3b] Length = 186 Score = 147 bits (373), Expect = 5e-34, Method: Composition-based stats. Identities = 58/174 (33%), Positives = 97/174 (55%), Gaps = 3/174 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M +K+A+ IDG L + LG IDYR+L F + + YY V D ++ Sbjct: 6 MLYSTDKLAILIDGQALTSLGFGLGMKIDYRRLKSRFARVSKLTTVKYYAIV--DADKVE 63 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 +P LLDWL YNG+Q+ K+A+ F + G RVK S+ +L+VD ++ ++H+++ Sbjct: 64 NPYVKLLDWLDYNGYQIHRKMARVFDDVDG-ARVKGSITADLSVDIIMMAKQVDHILLIG 122 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 G + + +R +VT++S++ ++ +D LRR D F++L L+NEIA Sbjct: 123 GHTDYCYAIQQAKRFGARVTLLSSLKAEGFRPADDLRRIVDDFIELEDLRNEIA 176 >gi|313500724|gb|ADR62090.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1] Length = 159 Score = 147 bits (373), Expect = 5e-34, Method: Composition-based stats. Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 15/165 (9%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIALF D NLY + + A G +Y L ++ A Y GD +QQ Sbjct: 1 MKKIALFADVQNLYYTVRQAHGCHFNYTALWADVSREGQIVEAVAYAIDRGDSKQQQ--- 57 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + ++ K DV + +D + + ++ +V+ SGDG Sbjct: 58 --FQQILRNLGFDVRLKPFIQRSDGS----AKGDWDVGITLDVIDAASRVDQVVLASGDG 111 Query: 124 CFTTLVA-ALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F L+ +QR + + V P + + L R A ++ + Sbjct: 112 DFDLLLERVIQRHGTE----AVVYGVPGLTALSLIRAATRYVPIE 152 >gi|167035773|ref|YP_001671004.1| hypothetical protein PputGB1_4782 [Pseudomonas putida GB-1] gi|166862261|gb|ABZ00669.1| protein of unknown function DUF88 [Pseudomonas putida GB-1] Length = 159 Score = 147 bits (372), Expect = 6e-34, Method: Composition-based stats. Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 15/165 (9%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIALF D NLY + + A G +Y L ++ A Y GD +QQ Sbjct: 1 MKKIALFADVQNLYYTVRQAHGCHFNYTALWADVSREGQIVEAVAYAIDRGDAKQQQ--- 57 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + ++ K DV + +D + + ++ +V+ SGDG Sbjct: 58 --FQQILRNLGFDVRLKPFIQRSDGS----AKGDWDVGITLDVIDAASRVDQVVLASGDG 111 Query: 124 CFTTLVA-ALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F L+ +QR + + V P + + L R A ++ + Sbjct: 112 DFDLLLERVIQRHGTE----AVVYGVPGLTALSLIRAATRYVPIE 152 >gi|298246249|ref|ZP_06970055.1| protein of unknown function DUF88 [Ktedonobacter racemifer DSM 44963] gi|297553730|gb|EFH87595.1| protein of unknown function DUF88 [Ktedonobacter racemifer DSM 44963] Length = 933 Score = 146 bits (370), Expect = 1e-33, Method: Composition-based stats. Identities = 41/172 (23%), Positives = 79/172 (45%), Gaps = 14/172 (8%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 F E++ +F+D ANL S++ L +D+ KLL R ++RA Y + Sbjct: 771 FPSTERVGVFVDVANLLYSARTLRMSVDFGKLLDFLRGNRRLVRAQAYCPTSPQAGDE-- 828 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVIF 119 L + G+++ K K F+ K+ +D++L +D E ++ +V+ Sbjct: 829 --QMFLQAVKGLGYRITTKNYKTFSSGA----KKADLDLDLCMDVVRLVEGRAVDCIVLV 882 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 SGD F ++ +V + + D +M++ LR+ D F++L+ L+ Sbjct: 883 SGDSDFMPMLDYCSDHGVRVEVAAF---DEAMSA-TLRQSCDLFVNLSLLEE 930 >gi|59711738|ref|YP_204514.1| hypothetical protein VF_1131 [Vibrio fischeri ES114] gi|59479839|gb|AAW85626.1| conserved protein [Vibrio fischeri ES114] Length = 159 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 37/166 (22%), Positives = 68/166 (40%), Gaps = 15/166 (9%) Query: 5 REKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 + +A+ +D N+Y +++ DY L V+ A Y D +Q+ Sbjct: 3 MKTVAILVDVQNIYYTTRDVYQRHFDYNALWAKVTEGRTVVGANAYAIARSDDKQKQ--- 59 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 + L GF V K + + K DV + +DA E +E + +V+ SGDG Sbjct: 60 --FHNILRGIGFDVKLKPFIQRRDGS----AKGDWDVGITLDAIELAEQADIVVLLSGDG 113 Query: 124 CFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F L+ +Q + K+V + + ++ + AD F+ + Sbjct: 114 DFDLLIKRIQSRFNKEVEV----YGVADLTANSIIDAADRFIPIED 155 >gi|315126212|ref|YP_004068215.1| hypothetical protein PSM_A1121 [Pseudoalteromonas sp. SM9913] gi|315014726|gb|ADT68064.1| hypothetical protein PSM_A1121 [Pseudoalteromonas sp. SM9913] Length = 164 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 35/167 (20%), Positives = 72/167 (43%), Gaps = 13/167 (7%) Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 + ++ +F+D N+Y + + + G + DY + + + A+ Y GD +Q Sbjct: 6 SSKPRVGIFVDVQNIYYTCRESYGKNFDYNAFWRMIEQQYDIECAFAYAIYRGDEKQNQ- 64 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 + L GF+V K + + K DV + +D EQ + L+ +++ SG Sbjct: 65 ----FQNILRAIGFEVKLKPFIQRRDGS----AKGDWDVGITIDMLEQGKQLDKVILLSG 116 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 DG F L+ L+ + + V + ++ L++ A+ F + Sbjct: 117 DGDFALLLGHLKNQYN---VSCDVYGADKLTAEVLKQSAEQFHLIDN 160 >gi|77360859|ref|YP_340434.1| hypothetical protein PSHAa1927 [Pseudoalteromonas haloplanktis TAC125] gi|76875770|emb|CAI86991.1| conserved protein of unknown function [Pseudoalteromonas haloplanktis TAC125] Length = 167 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 72/167 (43%), Gaps = 13/167 (7%) Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 + + ++ +F+D N+Y + + + G + DY + + + A+ Y GD +Q Sbjct: 9 NTKPRVGIFVDVQNIYYTCRESYGKNFDYNAFWRVMAQQYNIECAFAYAIYRGDEKQSQ- 67 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 + L GF+V K + + K DV + +D E + L+ +++ SG Sbjct: 68 ----FQNILRAIGFEVKLKPFIQRRDGS----AKGDWDVGITIDMLEHGKNLDKVILLSG 119 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 DG F L+ L+ + + V + ++ L++ A+ F + Sbjct: 120 DGDFALLLGHLKSQYN---VSCDVYGADRLTAEALKQSAEQFHLIDN 163 >gi|325294340|ref|YP_004280854.1| hypothetical protein Dester_0137 [Desulfurobacterium thermolithotrophum DSM 11699] gi|325064788|gb|ADY72795.1| hypothetical protein Dester_0137 [Desulfurobacterium thermolithotrophum DSM 11699] Length = 195 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 45/177 (25%), Positives = 87/177 (49%), Gaps = 13/177 (7%) Query: 7 KIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 ++A+F+D N+Y +K L +D+++LL+ + RA Y + Q Sbjct: 17 RVAVFVDMQNIYYGAKNTLKKKVDFKRLLELGVRGRTLYRAIAYLVDLDKVNQD-----S 71 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDG 123 + L G++V K K+F + + K+ D+ +A+DA +E ++ +V+ SGDG Sbjct: 72 FIYVLRSLGYEVKLKEPKKFY-SWDKIEYKADWDMGIAIDAIAMAENGKIDVVVLMSGDG 130 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 F L+ L+ K KV ++S S+ + +L A+ ++DL + + I + E+ Sbjct: 131 DFVDLINFLKAKGIKVEVISF----RSITAKELIHAANEYIDLGEIGDYIVLEEKEN 183 >gi|254428823|ref|ZP_05042530.1| conserved hypothetical protein [Alcanivorax sp. DG881] gi|196194992|gb|EDX89951.1| conserved hypothetical protein [Alcanivorax sp. DG881] Length = 157 Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 41/165 (24%), Positives = 72/165 (43%), Gaps = 15/165 (9%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 + + + +D N+Y +++ A DY + + V++A Y GD +Q Sbjct: 1 MKTVLILVDVQNVYYTTRQAFNRRFDYNQFWSTVTAEGQVVKAIAYAIDRGDKKQ----- 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 + L GF+V K + ++ K DV +A+DA E + ++ +V+ SGDG Sbjct: 56 REFQNILRAIGFEVKLKPFIQRSDGS----AKGDWDVGIAIDALEYAAEVDSVVLVSGDG 111 Query: 124 CFTTLVAALQ-RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F LV L+ K K V + + +D L R A F+ + Sbjct: 112 DFDLLVDKLRVDKGKHVDV----YGVAPLTADSLARAASRFVPIE 152 >gi|23009928|ref|ZP_00050797.1| COG1432: Uncharacterized conserved protein [Magnetospirillum magnetotacticum MS-1] Length = 110 Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats. Identities = 48/95 (50%), Positives = 74/95 (77%) Query: 78 VAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVK 137 + K KEFT++ GR+++K +MD+ELA+DA E + ++H+V+FSGDG F +LV A+QR+ Sbjct: 1 MTKPVKEFTDSAGRRKIKGNMDIELAIDALELAPYIDHMVLFSGDGDFRSLVEAIQRRGV 60 Query: 138 KVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 +V++VST+ + P+M +D LRRQAD F+DLA+L N Sbjct: 61 RVSVVSTIQTQPAMIADDLRRQADEFVDLAHLANR 95 >gi|312881670|ref|ZP_07741448.1| hypothetical protein VIBC2010_10472 [Vibrio caribbenthicus ATCC BAA-2122] gi|309370733|gb|EFP98207.1| hypothetical protein VIBC2010_10472 [Vibrio caribbenthicus ATCC BAA-2122] Length = 158 Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats. Identities = 40/166 (24%), Positives = 70/166 (42%), Gaps = 15/166 (9%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 EKIA+F+D N+Y +++ DY + V+ A Y ++ Sbjct: 1 MEKIAIFVDVQNIYYTTREKYRAHFDYNHFWHVVATEKEVVVANAYAIASK--HEKQRQF 58 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 H +L + GF+V K + + K D+ +A+D ++ S+ ++ +++ SGDG Sbjct: 59 HHILRGI---GFEVKLKPFLQRKDG----TAKGDWDIGIALDIYDISKEVDRVILLSGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVST-VLSDPSMASDQLRRQADYFMDLAY 168 F LV + KK + V PS+ S L D F + Sbjct: 112 DFEVLVDRV----KKTSNAKFDVFGVPSLTSQSLIDVCDNFTPIDE 153 >gi|294495612|ref|YP_003542105.1| hypothetical protein Mmah_0940 [Methanohalophilus mahii DSM 5219] gi|292666611|gb|ADE36460.1| protein of unknown function DUF88 [Methanohalophilus mahii DSM 5219] Length = 161 Score = 144 bits (365), Expect = 4e-33, Method: Composition-based stats. Identities = 40/161 (24%), Positives = 75/161 (46%), Gaps = 15/161 (9%) Query: 1 MFDPREKIALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59 MF +K+A+F+D N++ S++ + + +DY KLL+A + RA Y D +Q Sbjct: 1 MFSS-QKLAVFVDVQNMFYSARNIHYGRLDYEKLLRAVVMERKLTRAIAYLVETPDIDQS 59 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIF 119 ++ G++V +K K + K D+ +A+DA + ++ +V+ Sbjct: 60 -----GFKSFIGSIGWEVKSKALKVRPDGS----TKGDWDMGIAIDAISIAPKVDTIVLV 110 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160 SGDG F L+ L+ +V + S +++L A Sbjct: 111 SGDGDFVDLINHLKAIGVRVEVHSF----KESTAEELINAA 147 >gi|195953568|ref|YP_002121858.1| protein of unknown function DUF88 [Hydrogenobaculum sp. Y04AAS1] gi|195933180|gb|ACG57880.1| protein of unknown function DUF88 [Hydrogenobaculum sp. Y04AAS1] Length = 176 Score = 144 bits (364), Expect = 5e-33, Method: Composition-based stats. Identities = 47/180 (26%), Positives = 85/180 (47%), Gaps = 13/180 (7%) Query: 3 DPREKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 + R+ +FIDG NLY K L F +D KL++ F + + ++Y + E+Q Sbjct: 6 NSRKIAGIFIDGTNLYFVQKQFLDFKVDILKLVRYFANYFAIYNTFFYLAYKEEEEKQ-- 63 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 + L + G V+ K K+ + +K ++DV+LA+D + + ++ +G Sbjct: 64 --NKFYRMLTFGGVTVIKKAVKQLKDGS----MKGNLDVDLAMDCLLTKDNYDVAILVTG 117 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 D F L+ L+ K++ +VST S +S +L D F++L L I + E + Sbjct: 118 DSDFEKLINILRTFGKQIIVVSTKDS----SSIELVNICDLFVELKDLAPFIKLEEHEKQ 173 >gi|332535674|ref|ZP_08411432.1| hypothetical protein PH505_dg00100 [Pseudoalteromonas haloplanktis ANT/505] gi|332034924|gb|EGI71450.1| hypothetical protein PH505_dg00100 [Pseudoalteromonas haloplanktis ANT/505] Length = 167 Score = 143 bits (362), Expect = 9e-33, Method: Composition-based stats. Identities = 35/165 (21%), Positives = 73/165 (44%), Gaps = 13/165 (7%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 + ++ +F+D N+Y + + + G + DY + ++ + A+ Y GD +Q Sbjct: 11 KPRVGIFVDVQNIYYTCRESYGKNFDYNAFWRMMEAQYNIECAFAYAIYRGDEKQNQ--- 67 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 + L GF+V K + + K DV + +D EQ + L+ +++ SGDG Sbjct: 68 --FQNILRAIGFEVKLKPFIQRRDGS----AKGDWDVGITIDMLEQGKNLDKVILLSGDG 121 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F L+ L+ + + V + ++ L++ A+ F + Sbjct: 122 DFALLLGHLKNQYN---VPCDVYGADRLTAEVLKQSAEQFHLIDN 163 >gi|328952819|ref|YP_004370153.1| Domain of unknown function DUF88 [Desulfobacca acetoxidans DSM 11109] gi|328453143|gb|AEB08972.1| Domain of unknown function DUF88 [Desulfobacca acetoxidans DSM 11109] Length = 297 Score = 143 bits (362), Expect = 9e-33, Method: Composition-based stats. Identities = 41/162 (25%), Positives = 82/162 (50%), Gaps = 12/162 (7%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAF-RSRAIVIRAYYYTTVVGDP---EQQFSP 62 KI +++D N+ + G+ + Y L + R+ ++R Y + + + ++ Sbjct: 30 KIGVYVDSMNI---VRNGGYGMRYEVLRRFATRNGGQIVRLNAYVALDEERVGADPNYNA 86 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122 + L GF+V+ K + FT+ GR K++ D+++A+D QS+ L+ +++ +GD Sbjct: 87 TLNFISTLRDLGFKVIEKPIRWFTDESGRTYGKANADMDMALDIISQSDRLDMVLLLTGD 146 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 G F +V +Q K +V +V+ + S LRR+ D F+ Sbjct: 147 GDFCNVVTMVQNKGCRVELVAF-----ANVSSWLRREVDLFV 183 >gi|87121768|ref|ZP_01077655.1| hypothetical protein MED121_19509 [Marinomonas sp. MED121] gi|86163019|gb|EAQ64297.1| hypothetical protein MED121_19509 [Marinomonas sp. MED121] Length = 163 Score = 143 bits (362), Expect = 1e-32, Method: Composition-based stats. Identities = 39/164 (23%), Positives = 69/164 (42%), Gaps = 13/164 (7%) Query: 1 MFDPREKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59 + D KIA+F+D N+Y +S+ +Y+K ++ +++AY Y GD +Q Sbjct: 3 VIDSAPKIAIFVDVQNIYYTSRHTFARHFNYQKFWDEIAAQGEIVQAYAYAIDKGDSKQA 62 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIF 119 L GF+V K + + K DV + +D + ++ +V+ Sbjct: 63 Q-----FQQILRGIGFEVKLKPFIQRRDGS----AKGDWDVGITIDVLAAAPDVDIIVLA 113 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163 SGDG F L+ A + K + S V + + L D + Sbjct: 114 SGDGDFALLLDAARTKYQ---CQSQVYGVDKLTAAALIDSCDLY 154 >gi|262189634|ref|ZP_06048020.1| hypothetical protein VIH_000054 [Vibrio cholerae CT 5369-93] gi|262034486|gb|EEY52840.1| hypothetical protein VIH_000054 [Vibrio cholerae CT 5369-93] Length = 145 Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats. Identities = 37/154 (24%), Positives = 67/154 (43%), Gaps = 15/154 (9%) Query: 17 LYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGF 75 +Y + + G DY + V++A Y DP+Q+ H +L + G Sbjct: 1 MYYTCREQYGRHFDYNQFWSQVTQNRTVVKANAYAIASKDPQQR--QFHHILRGI---GL 55 Query: 76 QVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAAL-QR 134 +V+ K + ++ K DV +A+D +E ++ ++ +V+ SGDG F LV + QR Sbjct: 56 EVMLKPFIQRSDGS----AKGDWDVGIALDGYELAQEVDTVVLVSGDGDFEPLVTRIAQR 111 Query: 135 KVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 KV + P + + L A F + + Sbjct: 112 FQVKVEV----YGVPKLTAQHLIDVASQFHPIEH 141 >gi|90415555|ref|ZP_01223489.1| hypothetical protein GB2207_09566 [marine gamma proteobacterium HTCC2207] gi|90332878|gb|EAS48048.1| hypothetical protein GB2207_09566 [marine gamma proteobacterium HTCC2207] Length = 161 Score = 142 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 40/166 (24%), Positives = 74/166 (44%), Gaps = 16/166 (9%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIA+F+D N+Y + K G +YR+L + + +++A Y D Q Sbjct: 1 MKKIAVFVDVQNIYYTVKEQFGCYFNYRELWRQLGEQGEIVQATAYAIERNDAGQ----- 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGL---EHLVIFS 120 L GF+V K + ++ K DV +A+D + + E +V+ S Sbjct: 56 RGFQQVLRDIGFEVKLKPFIQRSDGS----AKGDWDVGIAIDIMDCAATTNPPEEIVLLS 111 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 GDG F L+A + + + + ++V ++ + L AD+F + Sbjct: 112 GDGDFDLLLARVSQ---RYAVSTSVFGVAALTAASLIDAADHFQPI 154 >gi|332993345|gb|AEF03400.1| hypothetical protein ambt_09370 [Alteromonas sp. SN2] Length = 157 Score = 142 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 38/162 (23%), Positives = 69/162 (42%), Gaps = 14/162 (8%) Query: 5 REKIALFIDGANLYASSKALG-FDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 + +ALF+D N+Y +++ + + DY + V++A Y GD +Q Sbjct: 1 MDNVALFVDVQNIYYTTRQIHKCNFDYNHFWRLATEGRNVVKAVAYAIERGDTKQ----- 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 + L GF+V K + + K DV + +DA E ++ + +V +GDG Sbjct: 56 REFQNILRGIGFEVKLKPFIQRADGS----AKGDWDVGITIDAMEYADLADTIVFATGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165 F L + L K K+V + + S L + A ++ Sbjct: 112 DFDILASKLVDKGKEVEV----YGVQELTSVSLIKAASKYVP 149 >gi|331005219|ref|ZP_08328612.1| hypothetical protein IMCC1989_1379 [gamma proteobacterium IMCC1989] gi|330420962|gb|EGG95235.1| hypothetical protein IMCC1989_1379 [gamma proteobacterium IMCC1989] Length = 170 Score = 142 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 36/168 (21%), Positives = 71/168 (42%), Gaps = 15/168 (8%) Query: 4 PREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 R+KIA+F+D N+Y +++ +YR L + +++ ++ A Y GD +Q Sbjct: 10 SRKKIAVFVDVQNIYYTTRDRYNKPFNYRHLWQRLQAQGDIVIANAYAIHRGDDKQLQ-- 67 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFS 120 L GF + K + + K DV +A+D + + + +++ S Sbjct: 68 ---FQSALKSIGFTMKLKPYIQRKDGS----AKGDWDVGIAIDVMDVAASGTADTIILLS 120 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 GDG F L+ ++ K + + V + ++ L A F + Sbjct: 121 GDGDFDLLLEKVK---KDYHMTTEVYGVAELTANSLITSATTFHPITE 165 >gi|320160886|ref|YP_004174110.1| hypothetical protein ANT_14820 [Anaerolinea thermophila UNI-1] gi|319994739|dbj|BAJ63510.1| hypothetical protein ANT_14820 [Anaerolinea thermophila UNI-1] Length = 302 Score = 142 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 50/170 (29%), Positives = 83/170 (48%), Gaps = 13/170 (7%) Query: 9 ALFIDGANLYASSKALGFDIDYRKLLKA-FRSRAIVIRAYYYTTVV----GDPEQQFSPL 63 +F+D AN+Y + G + Y L + R A IR Y T D E+ Sbjct: 34 GVFVDVANIYLNG---GQRMQYDVLREFACRDHAEAIRLNAYVTYDVERAEDDEEYRKGA 90 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L G++V+ K +T+ G + K++ D+++AVDA QS+ L+ ++I SGDG Sbjct: 91 QNFHGALRDLGYKVIVKDIHWYTDVNGIRVAKANADLDMAVDALTQSDYLDRVLIASGDG 150 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 F +V ALQ K +V +V S++L+ +AD+F+ + + I Sbjct: 151 DFVQVVRALQNKGCRVEVVGL-----DNVSNRLKAEADFFISGYLIPDLI 195 >gi|326794335|ref|YP_004312155.1| hypothetical protein Marme_1044 [Marinomonas mediterranea MMB-1] gi|326545099|gb|ADZ90319.1| Domain of unknown function DUF88 [Marinomonas mediterranea MMB-1] Length = 204 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 34/164 (20%), Positives = 66/164 (40%), Gaps = 13/164 (7%) Query: 8 IALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 ++F+D N+Y +++ DY S+ + AY Y GD +Q+ Sbjct: 51 ASIFVDVQNIYYTTRQTYRRGFDYNAFWAEVSSKYDIKNAYAYAIDRGDEKQKQ-----F 105 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126 + L GF V K + + K DV + +D E +E + +++ +GDG F+ Sbjct: 106 QNILRAIGFDVKLKPYIQRADGS----SKGDWDVGITIDVMEHAEESDVVILVTGDGDFS 161 Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170 L ++ K + + V + + L AD + + + Sbjct: 162 ILADKIKGKYR---CLVEVYGVEKLTATSLINTADVYYPIEDSR 202 >gi|152994925|ref|YP_001339760.1| hypothetical protein Mmwyl1_0893 [Marinomonas sp. MWYL1] gi|150835849|gb|ABR69825.1| protein of unknown function DUF88 [Marinomonas sp. MWYL1] Length = 158 Score = 141 bits (357), Expect = 3e-32, Method: Composition-based stats. Identities = 40/158 (25%), Positives = 67/158 (42%), Gaps = 15/158 (9%) Query: 8 IALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 + + +D N+Y +++ A G DY + V++A Y GD +Q Sbjct: 4 VTILVDVQNVYYTTRQAFGRSFDYNTFWQQATEGRNVVKAIAYAIDRGDEKQ-----RQF 58 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126 + L GF+V K + ++ K DV +A+D E + + LV+ SGDG F Sbjct: 59 QNILRAIGFEVKLKPFIQRSDGS----AKGDWDVGIAIDGIEHGKDSDVLVLLSGDGDFD 114 Query: 127 TLVAALQRKVK-KVTIVSTVLSDPSMASDQLRRQADYF 163 L L+ K + +V + S+ + L AD F Sbjct: 115 ILAKTLREKYQTRVEV----YGVESLTAQSLINAADSF 148 >gi|5441510|emb|CAB46751.1| hypothetical protein [Synechococcus elongatus] Length = 142 Score = 141 bits (357), Expect = 3e-32, Method: Composition-based stats. Identities = 38/144 (26%), Positives = 70/144 (48%), Gaps = 12/144 (8%) Query: 35 KAFRSRAI--VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENC-GR 91 + F ++ A++YT + +Q D L G+ V K+ KE+ + G+ Sbjct: 1 EFFTRDPKIVLVNAFWYTGLKDMQDQ-----RSFRDALINLGYTVRTKLLKEYYDESLGK 55 Query: 92 KRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSM 151 K+++D+E+ +D F + +V+FSGDG F + L+ K +T+VST M Sbjct: 56 YYQKANLDIEIVIDMFNTVGQYDRVVLFSGDGDFERAIELLRSKNTHITVVST----EGM 111 Query: 152 ASDQLRRQADYFMDLAYLKNEIAR 175 + +LR D ++DL ++ I + Sbjct: 112 IARELRNATDRYIDLNEIRPFIEK 135 >gi|46200099|ref|YP_005766.1| hypothetical protein TTC1797 [Thermus thermophilus HB27] gi|55980158|ref|YP_143455.1| hypothetical protein TTHA0189 [Thermus thermophilus HB8] gi|46197727|gb|AAS82139.1| hypothetical conserved protein [Thermus thermophilus HB27] gi|55771571|dbj|BAD70012.1| conserved hypothetical protein [Thermus thermophilus HB8] Length = 181 Score = 141 bits (356), Expect = 5e-32, Method: Composition-based stats. Identities = 44/181 (24%), Positives = 84/181 (46%), Gaps = 12/181 (6%) Query: 5 REKIALFIDGANLYAS-SKALG--FDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 E++A+FIDG+NLY + LG + +++ + + + ++RAYYY + + Sbjct: 1 MERVAIFIDGSNLYKGLVQHLGSDYRLNFVEFITLLTAGRKLLRAYYYNAPLPPEDPAAK 60 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIF 119 L++L + V ++ + E V+ +D+++AVD + + V+ Sbjct: 61 AHQSFLNYLKRVPY-VTVRLGR--LERRADGFVEKGVDIQIAVDMLRLAFVNAYDIAVLV 117 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 SGDG F +V +Q K+V + +++S +L +QAD+F L E R Sbjct: 118 SGDGDFAEVVRVVQDLGKQVENTTF----HALSSHRLAQQADHFYPLDDFPWERLRAQVS 173 Query: 180 D 180 Sbjct: 174 P 174 >gi|319790275|ref|YP_004151908.1| hypothetical protein Theam_1304 [Thermovibrio ammonificans HB-1] gi|317114777|gb|ADU97267.1| hypothetical protein Theam_1304 [Thermovibrio ammonificans HB-1] Length = 181 Score = 141 bits (355), Expect = 5e-32, Method: Composition-based stats. Identities = 45/169 (26%), Positives = 79/169 (46%), Gaps = 13/169 (7%) Query: 8 IALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 + +F+D N+Y +K L +D++ LLK + RA Y + Q Sbjct: 18 VGVFVDMQNIYYGAKNTLKRKVDFKNLLKIAVRGRQLYRAIAYLVDLERVNQD-----GF 72 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGC 124 + L G++V K K+F N + K+ D+ +A+DA +E ++ +V+ SGDG Sbjct: 73 IYVLRSIGYEVKLKEPKKFY-NWDKVEYKADWDMGIAIDAIAMAENGKVDVVVLMSGDGD 131 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 F L+ L+ K KV ++S S+ + +L A ++DL + I Sbjct: 132 FVDLINFLKAKGIKVEVISF----RSITAKELIYSASEYIDLEEFADFI 176 >gi|320449117|ref|YP_004201213.1| hypothetical protein TSC_c00110 [Thermus scotoductus SA-01] gi|320149286|gb|ADW20664.1| hypothetical protein TSC_c00110 [Thermus scotoductus SA-01] Length = 181 Score = 141 bits (355), Expect = 5e-32, Method: Composition-based stats. Identities = 43/182 (23%), Positives = 85/182 (46%), Gaps = 12/182 (6%) Query: 5 REKIALFIDGANLYAS-SKALG--FDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 E++A+FIDG+NLY + LG + +++ + + + ++RAYYY + + Sbjct: 1 MERVAIFIDGSNLYKGLVQHLGPDYRLNFVEFISLLTAGRRLLRAYYYNAPLPPEDPAAK 60 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIF 119 L++L + V ++ + E V+ +D+++A+D + + + V+ Sbjct: 61 AHQSFLNYLKRVPY-VAVRLGR--LERRADGFVEKGVDIQIAIDILRLAYADAYDVAVLV 117 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 SGDG F +V +Q K+V + +++S +L +QAD F L E R Sbjct: 118 SGDGDFAEVVKVVQDMGKQVENTTF----HALSSHRLAQQADRFYPLDDFPWERLRAQSL 173 Query: 180 DK 181 + Sbjct: 174 PQ 175 >gi|51244756|ref|YP_064640.1| hypothetical protein DP0904 [Desulfotalea psychrophila LSv54] gi|50875793|emb|CAG35633.1| hypothetical protein DP0904 [Desulfotalea psychrophila LSv54] Length = 258 Score = 140 bits (354), Expect = 7e-32, Method: Composition-based stats. Identities = 44/169 (26%), Positives = 81/169 (47%), Gaps = 13/169 (7%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSR-AIVIRAYYYTTVV----GD 55 M++ K +++D N+ G+ + Y L++ S A ++RA Y D Sbjct: 1 MYNDMLKTGIYVDAENIRMCG---GYGMRYDVLVELAGSGNAALLRANSYVAEDRERTKD 57 Query: 56 PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEH 115 + L+ D L GF+V+ K K F ++ G K++ D++LA+DA Q+ L+ Sbjct: 58 DAEYRHKLYRYHDVLRQCGFKVIKKFVKHFVDDEGILTTKANADMDLAIDALLQARNLDR 117 Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 +++ +GD F L+ ALQ +V +++ S +L+ AD F+ Sbjct: 118 IILLTGDSDFIRLILALQNMGCRVEVIAF-----KHVSQELKECADNFL 161 >gi|119471730|ref|ZP_01614090.1| hypothetical protein ATW7_08766 [Alteromonadales bacterium TW-7] gi|119445353|gb|EAW26641.1| hypothetical protein ATW7_08766 [Alteromonadales bacterium TW-7] Length = 162 Score = 140 bits (354), Expect = 8e-32, Method: Composition-based stats. Identities = 35/163 (21%), Positives = 71/163 (43%), Gaps = 13/163 (7%) Query: 7 KIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 K+ +F+D N+Y + + + + DY + + + + A+ Y GD +Q Sbjct: 8 KVGIFVDVQNIYYTCRESYSKNFDYNAFWRVIQEQYEIDCAFAYAIYRGDEKQNQ----- 62 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125 + L GF+V K + + K DV + +D E + L+ +++ SGDG F Sbjct: 63 FQNILRAIGFEVKLKPFIQRRDGS----AKGDWDVGITIDMLEHGKNLDKVILLSGDGDF 118 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 L+A L+ + + V + ++ L++ A+ F + Sbjct: 119 ALLLAHLKNQYN---VPCDVYGADKLTAEVLKQSAEQFHLIDD 158 >gi|317050842|ref|YP_004111958.1| hypothetical protein Selin_0654 [Desulfurispirillum indicum S5] gi|316945926|gb|ADU65402.1| hypothetical protein Selin_0654 [Desulfurispirillum indicum S5] Length = 290 Score = 140 bits (353), Expect = 9e-32, Method: Composition-based stats. Identities = 45/166 (27%), Positives = 82/166 (49%), Gaps = 13/166 (7%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKA-FRSRAIVIRAYYYTTVVGDPEQQFSP 62 K+ +++D ANL + G+ + Y L + R A ++R Y + D + +P Sbjct: 17 SNAKVGVYVDVANL---VRNGGYGMRYEVLREFACRDGAELVRLNAYVSFDVDRASKDAP 73 Query: 63 LH----PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVI 118 L G++V+ K K + + G + K++ D+++AVDA QSE L+ +++ Sbjct: 74 YKYKMTNFYAILRDFGYKVIEKPVKWYVDESGNRFGKANADLDMAVDALLQSENLDRVLL 133 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 +GDG F +V ALQ K +V ++ S L++++D FM Sbjct: 134 VTGDGDFVQVVRALQNKGCRVETMAF-----QNISSDLKKESDMFM 174 >gi|297567046|ref|YP_003686018.1| hypothetical protein Mesil_2661 [Meiothermus silvanus DSM 9946] gi|296851495|gb|ADH64510.1| protein of unknown function DUF88 [Meiothermus silvanus DSM 9946] Length = 181 Score = 139 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 46/183 (25%), Positives = 91/183 (49%), Gaps = 12/183 (6%) Query: 5 REKIALFIDGANLYA---SSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 E++A+FIDG+NLY SS + + +D+ + ++ + ++RAYYY + + Sbjct: 1 MERVAVFIDGSNLYKGLVSSLSSDYRLDFVQFIETLVAGRKLLRAYYYNAPLPVEDPAAK 60 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIF 119 L++L + V ++ + E G V+ +D+++A+D + + + V+ Sbjct: 61 AHQSFLNYLKRVPY-VAVRLGR--LERRGEGFVEKGVDIQIAIDLLKLAYANAYDVAVLV 117 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 SGDG F +V +Q K+V + +++S +L +QAD F L L E R + Sbjct: 118 SGDGDFADVVKVIQDMGKQVENSTF----QALSSHRLAQQADRFFPLDELPWERLRARAQ 173 Query: 180 DKK 182 +++ Sbjct: 174 EEQ 176 >gi|218296000|ref|ZP_03496780.1| protein of unknown function DUF88 [Thermus aquaticus Y51MC23] gi|218243738|gb|EED10266.1| protein of unknown function DUF88 [Thermus aquaticus Y51MC23] Length = 181 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 42/182 (23%), Positives = 85/182 (46%), Gaps = 12/182 (6%) Query: 5 REKIALFIDGANLYAS-SKALG--FDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 E++A+FIDG+NLY + LG + +++ + + + ++RAYYY + + Sbjct: 1 MERVAIFIDGSNLYKGLVQHLGSDYRLNFVEFITLLTAGRKLLRAYYYNAPLPPEDPAAK 60 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIF 119 L++L + V ++ + E V+ +D+++A+D + + + ++ Sbjct: 61 AHQSFLNYLKRVPY-VAVRLGR--LERRAEGFVEKGVDIQIAIDILRLAYADAYDIAILV 117 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 SGDG F +V +Q K+V + +++S +L +QAD F L E R Sbjct: 118 SGDGDFAEVVRVVQDMGKQVENTTF----HALSSHRLAQQADRFYPLDDFPWERLRATSL 173 Query: 180 DK 181 + Sbjct: 174 PQ 175 >gi|237808056|ref|YP_002892496.1| hypothetical protein Tola_1293 [Tolumonas auensis DSM 9187] gi|237500317|gb|ACQ92910.1| protein of unknown function DUF88 [Tolumonas auensis DSM 9187] Length = 162 Score = 138 bits (349), Expect = 3e-31, Method: Composition-based stats. Identities = 39/165 (23%), Positives = 68/165 (41%), Gaps = 13/165 (7%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 E++ + +D N+Y ++K A + DY K + V++A Y GD +Q Sbjct: 1 MERVVVLVDVQNIYYTTKQAYNCNFDYNAFWKKVTANRQVVKAIAYAIDRGDEKQ----- 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 + L GF+V K + + K + D+ + +DA E ++ + +V+ SGDG Sbjct: 56 RQFQNILRAIGFEVKLKPLIQRVDG----TAKGNWDIGITLDAMEYAKESDIVVLASGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F L+ + K V P S L A F+ + Sbjct: 112 DFDLLINKIH---KDYDAWVEVYGVPKYTSVALVNSASKFIPVDS 153 >gi|313679213|ref|YP_004056952.1| hypothetical protein Ocepr_0319 [Oceanithermus profundus DSM 14977] gi|313151928|gb|ADR35779.1| protein of unknown function DUF88 [Oceanithermus profundus DSM 14977] Length = 173 Score = 136 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 43/173 (24%), Positives = 82/173 (47%), Gaps = 12/173 (6%) Query: 5 REKIALFIDGANLYA---SSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 E++A+FIDG+NLY S+ + +D+ K ++ + ++RAYYY + + Sbjct: 1 MERVAIFIDGSNLYKGLVSTLGSEYRLDFVKFIETLVAGRKLLRAYYYNAPLPTEDAASR 60 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIF 119 L++L + V ++ + E G V+ +D+++AVD + + V+ Sbjct: 61 AHQSFLNYLKRVPY-VSVRLGR--LERRGDTFVEKGVDIQIAVDMLRLAYARAYDVGVLV 117 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 SGDG F +V +Q +V + +++S +L +QAD F L + Sbjct: 118 SGDGDFAEVVRVIQDMGMQVENATF----HALSSYRLAQQADRFYPLDEFPWD 166 >gi|94500534|ref|ZP_01307065.1| hypothetical protein RED65_15728 [Oceanobacter sp. RED65] gi|94427324|gb|EAT12303.1| hypothetical protein RED65_15728 [Oceanobacter sp. RED65] Length = 157 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 37/162 (22%), Positives = 71/162 (43%), Gaps = 13/162 (8%) Query: 8 IALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 IA+F D N+Y +++ +Y+ L++ ++ ++++A+ Y G Q Sbjct: 4 IAVFADVQNIYYTTRDRFKRSFNYKALIEQLKNEGVIVQAHAYAIDRGIDSQI-----KF 58 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126 D L GF V K + + K DV + +D E ++ +E +V+ SGDG F Sbjct: 59 QDALRNMGFDVHLKPFIQRRDGS----AKGDWDVGITIDIMEAAKDVEEVVLLSGDGDFA 114 Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 L+ ++ + S V + ++ L + D F D+ Sbjct: 115 ILLEHIRDHYQTT---SKVYGVEFLTANGLIKSCDVFRDIDE 153 >gi|297622586|ref|YP_003704020.1| hypothetical protein Trad_0338 [Truepera radiovictrix DSM 17093] gi|297163766|gb|ADI13477.1| protein of unknown function DUF88 [Truepera radiovictrix DSM 17093] Length = 198 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 40/170 (23%), Positives = 77/170 (45%), Gaps = 10/170 (5%) Query: 4 PREKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 P +++ LF+D NLY +++ +DY +LK ++ A Y + Sbjct: 34 PEQRVGLFVDTQNLYYAARDIYSRHVDYAVMLKLSERSRHLVHATAYVVEREGEATAY-- 91 Query: 63 LHPLLDWLHYNGFQVVAKVAKEF-TENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 + L G++V + + ++ GR ++ D+ +A D + L+ +V+ SG Sbjct: 92 --GFVTKLSALGYRVRRRKVRVHRADSGGRPVLEGDWDMGIAADIVRAWDYLDVIVLASG 149 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 DG F ++ Q++ K+V +++ AS L AD FM LA + + Sbjct: 150 DGDFAPMLELAQQRGKRVEVLAF----REAASQNLLDLADAFMGLADVPD 195 >gi|114319473|ref|YP_741156.1| hypothetical protein Mlg_0311 [Alkalilimnicola ehrlichii MLHE-1] gi|114225867|gb|ABI55666.1| protein of unknown function DUF88 [Alkalilimnicola ehrlichii MLHE-1] Length = 274 Score = 134 bits (339), Expect = 4e-30, Method: Composition-based stats. Identities = 44/169 (26%), Positives = 82/169 (48%), Gaps = 13/169 (7%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKA-FRSRAIVIRAYYYTTVVGDPEQQ 59 M + + +++D AN+ + GF + Y L + R+ A IR Y T ++ Sbjct: 1 MAGSQGGVGIYVDAANIQMNG---GFGMQYDVLREFACRTGAEPIRLNAYVTYDEQRAER 57 Query: 60 FSPLH----PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEH 115 H + G++V+ K + + + G K++ D+++AVDA QS+ L Sbjct: 58 DRGYHQRVNNFFQSIREFGYKVIIKKYRWYRDEEGNAYAKANADLDMAVDALLQSQSLTR 117 Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 +++ +GDG F +V ALQ + +V +++ S +LRR+AD F+ Sbjct: 118 VMMVTGDGDFVQVVRALQNQGCRVELLAF-----DNISSELRREADVFV 161 >gi|320352193|ref|YP_004193532.1| hypothetical protein Despr_0047 [Desulfobulbus propionicus DSM 2032] gi|320120695|gb|ADW16241.1| hypothetical protein Despr_0047 [Desulfobulbus propionicus DSM 2032] Length = 258 Score = 134 bits (338), Expect = 5e-30, Method: Composition-based stats. Identities = 39/163 (23%), Positives = 79/163 (48%), Gaps = 13/163 (7%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRS-RAIVIRAYYYTTVVGDPEQQFSPLH- 64 K A+++D N+ S G+ + Y L+ + ++++RA Y + Q+ + Sbjct: 3 KTAIYVDAENIKMSG---GYGMRYDVLVDLANNTNSVMLRANCYLAEDHERTQRDAEYRQ 59 Query: 65 ---PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 + L GF+++ K + F + G K++ D++LA+DA Q+ L+ +++ +G Sbjct: 60 KVYSYHNILRQCGFKIIKKYVRRFKDEDGNITTKANADMDLAIDALLQARNLDRIILLTG 119 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 DG F L+ ALQ +V ++ + +LR AD ++ Sbjct: 120 DGDFLRLIIALQNMGCRVEVIGFHN-----VNKELREVADSYI 157 >gi|328949646|ref|YP_004366981.1| Domain of unknown function DUF88 [Marinithermus hydrothermalis DSM 14884] gi|328449970|gb|AEB10871.1| Domain of unknown function DUF88 [Marinithermus hydrothermalis DSM 14884] Length = 174 Score = 134 bits (337), Expect = 6e-30, Method: Composition-based stats. Identities = 42/173 (24%), Positives = 83/173 (47%), Gaps = 12/173 (6%) Query: 5 REKIALFIDGANLYA---SSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 ++IA+F+DG+NLY S+ + +D+ + +++ + ++RAYYY + + Sbjct: 1 MDRIAIFMDGSNLYKGLVSTLGPDYRLDFVRFIESLVAGRKLLRAYYYNAPLPSEDPASK 60 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIF 119 L++L + V ++ + E G V+ +D+++AVD + + V+ Sbjct: 61 AHQSFLNYLKRVPY-VAVRLGR--LERRGDTFVEKGVDIQIAVDMLRLAYARAYDVAVLV 117 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 SGDG F +V +Q +V + +++S +L +QAD F L E Sbjct: 118 SGDGDFAEVVRVVQDMGMQVENTTF----QALSSYRLAQQADRFYPLDDFSWE 166 >gi|83646130|ref|YP_434565.1| hypothetical protein HCH_03390 [Hahella chejuensis KCTC 2396] gi|83634173|gb|ABC30140.1| uncharacterized conserved protein [Hahella chejuensis KCTC 2396] Length = 303 Score = 133 bits (336), Expect = 8e-30, Method: Composition-based stats. Identities = 53/168 (31%), Positives = 81/168 (48%), Gaps = 12/168 (7%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRS-RAIVIRAYYYTTVVGDPEQQ 59 M K +FID NL G +DY ++K +VIRA Y V D EQ+ Sbjct: 1 MKYDGLKAGIFIDNDNLIYGQDREG--LDYSAIIKFVEDLGMLVIRANTYMAVDEDREQK 58 Query: 60 FSPLH----PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEH 115 + + GF+V K K++ + G K ++D+ELAVDA Q++ L++ Sbjct: 59 DAKYRQEQRKHRSDIRNAGFRVFEKPLKKYQQEDGTVYAKGNVDLELAVDALLQTDNLDY 118 Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163 +++ SGDG F+ +V+ALQ K KKV + S +L + D F Sbjct: 119 VLLGSGDGDFSRVVSALQHKGKKVEAFAF-----DNISTELSQGVDTF 161 >gi|330984094|gb|EGH82197.1| hypothetical protein PLA107_03594 [Pseudomonas syringae pv. lachrymans str. M301315] Length = 282 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 48/162 (29%), Positives = 85/162 (52%), Gaps = 14/162 (8%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKA-FRSRAIVIRAYYYTTVVGDPEQQFSPL 63 E++ ++ID AN+ A+ GF++DY L + R A + Y++ ++ Sbjct: 3 MERVGVYIDQANVNANQ---GFEMDYSVLREFALRGGARGVHLNVYSSTNPAKAERDPAW 59 Query: 64 HPLLDW----LHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIF 119 H L + G+ + K AKE+ E R VK++ DV++AVD E + L+ +++ Sbjct: 60 HSRLKAYQSQIRSMGYHINLKEAKEYGEGD-RLVVKANADVDIAVDVLESASKLDRILLV 118 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161 SGDG F++LVAA +R+ +V +++ S+QLR +D Sbjct: 119 SGDGDFSSLVAAARRQGARVEVLAF-----DHCSEQLRGASD 155 >gi|255020942|ref|ZP_05292998.1| hypothetical protein ACA_1164 [Acidithiobacillus caldus ATCC 51756] gi|254969733|gb|EET27239.1| hypothetical protein ACA_1164 [Acidithiobacillus caldus ATCC 51756] Length = 336 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 41/168 (24%), Positives = 80/168 (47%), Gaps = 18/168 (10%) Query: 4 PREKIALFIDGANL-YASSKALGFDIDYRKLLKAFRSRAI---VIRAYYYTTVVGD---- 55 R+ I +++D N+ Y A+ +D+ L+ F R ++R Y + + Sbjct: 5 SRQGIGVYVDAENIRYNGGYAMRYDV-----LRRFAGRGDDARLLRLNTYMAIDEERLRR 59 Query: 56 PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEH 115 + + G++++ K + FT+ G + K++ D++LAVD QSE L+ Sbjct: 60 DPDYRDGIRGYQQAVRDLGWKIIEKPVRWFTDEEGNRLSKANADLDLAVDVMLQSERLDQ 119 Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163 +++ +GDG F +V ALQ + +V +++ S L+ +AD F Sbjct: 120 VLLVTGDGDFLQVVRALQNRGCRVEVLAFRN-----VSRDLQHEADAF 162 >gi|113474390|ref|YP_720451.1| hypothetical protein Tery_0526 [Trichodesmium erythraeum IMS101] gi|110165438|gb|ABG49978.1| protein of unknown function DUF88 [Trichodesmium erythraeum IMS101] Length = 295 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 47/170 (27%), Positives = 80/170 (47%), Gaps = 13/170 (7%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 + + L ID ANL ++K+L +DY +L + + A Y + S Sbjct: 137 QRRTLLAIDSANLDGAAKSLNMKVDYERLKRYVNVHFGSLEARIYVGKYDNS----SRQK 192 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 ++L NG+ V K + VK+++DV+LA+D E +++V+ SGDG Sbjct: 193 LWFNYLEKNGYVVKTKPVTVYGN-----TVKANVDVDLALDIREHGVNFKNVVLCSGDGD 247 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 + LV LQ KV +++ P + L+RQAD ++ L + EI+ Sbjct: 248 YLPLVEQLQGLGIKVIVLA----SPGHTNHFLQRQADEYISLIDIMGEIS 293 >gi|254236844|ref|ZP_04930167.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|126168775|gb|EAZ54286.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] Length = 164 Score = 131 bits (329), Expect = 6e-29, Method: Composition-based stats. Identities = 32/142 (22%), Positives = 57/142 (40%), Gaps = 14/142 (9%) Query: 27 DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFT 86 ++Y L ++ AY Y GDP QQ L GF V K + Sbjct: 29 HLNYAALWADIARGGSIVEAYAYAIDRGDPRQQQ-----FQQILRNLGFTVKLKPYIQRA 83 Query: 87 ENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVA-ALQRKVKKVTIVSTV 145 + K DV + +D + + ++ +V+ SGDG F L+ ++ +V+T Sbjct: 84 DGS----AKGDWDVGITIDVLDAAPRVDEVVLLSGDGDFDLLLEKVIRAHG----VVATA 135 Query: 146 LSDPSMASDQLRRQADYFMDLA 167 P + ++ L R A ++ + Sbjct: 136 YGVPGLTANALIRAASRYVPIE 157 >gi|115360984|ref|YP_778121.1| hypothetical protein Bamb_6243 [Burkholderia ambifaria AMMD] gi|115286312|gb|ABI91787.1| protein of unknown function DUF88 [Burkholderia ambifaria AMMD] Length = 272 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 41/165 (24%), Positives = 80/165 (48%), Gaps = 13/165 (7%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLK-AFRSRAIVIRAYYYTTVVGDPE----QQ 59 ++ +++DG+++ A+ L + Y L A R+ A + R + Y + Sbjct: 4 MRRVGVYVDGSSMDANGGHL---MRYEVLRSLAGRAGATIQRLHAYLSFDERRAARSPDY 60 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIF 119 + + L GF+V K + + ++ G + VKS+ D+ +A+DA +S+ L+ ++I Sbjct: 61 DARIKGYQAALRDKGFRVTIKPLRHYADDDGTETVKSNSDLGMAIDALSESDRLDTVLIA 120 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 + DG F +V ALQ+K +V ++ +LR AD F+ Sbjct: 121 TSDGDFVEVVRALQKKGCRVEVLGF-----DNVPLELREAADQFI 160 >gi|67921188|ref|ZP_00514707.1| Protein of unknown function DUF88 [Crocosphaera watsonii WH 8501] gi|67857305|gb|EAM52545.1| Protein of unknown function DUF88 [Crocosphaera watsonii WH 8501] Length = 134 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 8/124 (6%) Query: 57 EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHL 116 ++ L W+ NG++V+AK + + K+++DVE+AVD + Sbjct: 2 DRTNEKQQGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDLMALVGSYDTA 57 Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 +I SGDG ++ + ++ +VS SM SD L AD ++DL +K +I + Sbjct: 58 IIVSGDGDLAYAADSVSYRGARIEVVSL----RSMTSDSLINVADRYIDLDQIKEDIQKT 113 Query: 177 PDED 180 + Sbjct: 114 RKPN 117 >gi|319959088|gb|ADV90708.1| LabA [Nostoc linckia EC108] Length = 127 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 32/108 (29%), Positives = 56/108 (51%), Gaps = 8/108 (7%) Query: 72 YNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAA 131 NG++V+AK + + K+++DVE+AVD + + V+ SGDG V + Sbjct: 1 RNGYRVIAKDLVQLPDGS----KKANLDVEIAVDMMALVDSYDTAVLVSGDGDLAYAVNS 56 Query: 132 LQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 + + +V +VS SM SD L +D ++DL +K +I + P + Sbjct: 57 VSYRGVRVEVVSL----RSMTSDSLINVSDRYIDLEAIKEDIQKTPRQ 100 >gi|288939925|ref|YP_003442165.1| hypothetical protein Alvin_0164 [Allochromatium vinosum DSM 180] gi|288895297|gb|ADC61133.1| protein of unknown function DUF88 [Allochromatium vinosum DSM 180] Length = 277 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 36/162 (22%), Positives = 76/162 (46%), Gaps = 13/162 (8%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAF-RSRAIVIRAYYYTTVVGDPEQQF----S 61 ++ +F+D N+ + G+ + Y L + R ++ R Y + ++ Sbjct: 6 RVGVFVDAENVRYNG---GYQMRYDILRRFAAREGGVLQRLNTYMAYDAERAREDYEYKK 62 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 H + G+++ AK + +T++ G K++ D+++AVDA Q+ L+ +++ +G Sbjct: 63 KAHAYQQMVRDFGWKITAKTVRRYTDDNGNVTTKANADLDMAVDAMLQANRLDQVLLVTG 122 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163 DG F +V ALQ +V ++ S L+++ D F Sbjct: 123 DGDFLQVVEALQNTGCRVELIGF-----KNVSRLLQQRVDAF 159 >gi|198282948|ref|YP_002219269.1| hypothetical protein Lferr_0812 [Acidithiobacillus ferrooxidans ATCC 53993] gi|218667530|ref|YP_002425151.1| hypothetical protein AFE_0663 [Acidithiobacillus ferrooxidans ATCC 23270] gi|198247469|gb|ACH83062.1| protein of unknown function DUF88 [Acidithiobacillus ferrooxidans ATCC 53993] gi|218519743|gb|ACK80329.1| conserved hypothetical protein [Acidithiobacillus ferrooxidans ATCC 23270] Length = 318 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 40/164 (24%), Positives = 77/164 (46%), Gaps = 14/164 (8%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAF--RSRAIVIRAYYYTTVVGD----PEQQFS 61 I +++D N+ + G+ + Y L + A ++R Y V G+ + Sbjct: 8 IGVYVDAENIRYNG---GYAMRYDVLRRFAGREEEARLLRLNTYMAVDGERMKRDREYRE 64 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 + + G++++ K + F + G K++ D++LAVD QSE L+ +++ +G Sbjct: 65 RIRGYQQAVRDLGWKIIEKPVRWFVDEEGNSMSKANADLDLAVDVMLQSERLDQVLLVTG 124 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165 DG F +V ALQ K +V +++ S +L+ +AD F Sbjct: 125 DGDFLQVVRALQNKGCRVEVLAFRN-----VSRELQYEADAFYP 163 >gi|254787275|ref|YP_003074704.1| hypothetical protein TERTU_3357 [Teredinibacter turnerae T7901] gi|237685617|gb|ACR12881.1| conserved hypothetical protein [Teredinibacter turnerae T7901] Length = 258 Score = 127 bits (321), Expect = 5e-28, Method: Composition-based stats. Identities = 58/182 (31%), Positives = 89/182 (48%), Gaps = 15/182 (8%) Query: 7 KIALFIDGANLYASSKALGFDID-YRKLLKAFRSRAIVIRAYYYTTVVGDPE----QQFS 61 K +F+D NL + G D RKL++A V+RA Y V E + Sbjct: 3 KAGIFLDMENLNMNG-GWGMRFDVIRKLVEA--QGTTVLRANVYIAVDNAREKYDFEYRE 59 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 D + GF +V K + FT G + +K++ D++LAVDA Q+E L+++++ +G Sbjct: 60 KAQARRDKMRLAGFHIVEKEIRRFTNADGTQNIKANADLDLAVDAMLQAENLDYILLGTG 119 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN--EIARDPDE 179 DG F LV ALQ K K+V V+ S +LRR+ DY+ A + I DP + Sbjct: 120 DGDFLRLVRALQSKGKRVDAVAIHN-----VSGELRREVDYYFHGATIPGLLPIKNDPKK 174 Query: 180 DK 181 + Sbjct: 175 IR 176 >gi|126655888|ref|ZP_01727327.1| hypothetical protein CY0110_19792 [Cyanothece sp. CCY0110] gi|126623367|gb|EAZ94072.1| hypothetical protein CY0110_19792 [Cyanothece sp. CCY0110] Length = 103 Score = 124 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 34/105 (32%), Positives = 59/105 (56%), Gaps = 5/105 (4%) Query: 73 NGFQVVAKVAKEFTEN-CGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAA 131 G+ V K+ KE+ ++ GR K+++D+E+ VD F E + +++FSGDG F + Sbjct: 1 MGYTVRTKILKEYYDDTSGRYSQKANLDIEIVVDMFNTVEQYDRVILFSGDGDFERAIEL 60 Query: 132 LQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 L+ K +T+VST M + +LR D ++DL +K+ I + Sbjct: 61 LRSKNTHITVVST----EGMIARELRNATDRYIDLNDIKDSIEKQ 101 >gi|297623823|ref|YP_003705257.1| hypothetical protein Trad_1595 [Truepera radiovictrix DSM 17093] gi|297165003|gb|ADI14714.1| protein of unknown function DUF88 [Truepera radiovictrix DSM 17093] Length = 173 Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 40/170 (23%), Positives = 75/170 (44%), Gaps = 12/170 (7%) Query: 6 EKIALFIDGANLYASSKAL--GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP--EQQFS 61 E++A+FIDG+NLY + G ++ ++ + + ++R YYY + D ++ Sbjct: 3 ERVAVFIDGSNLYNGMRDNLTGTRVNLQEFVAQLVCKRHLVRTYYYNAPLTDDYDTERRE 62 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIF 119 + L + V ++ + G K +DV +AV++ + + +++ Sbjct: 63 GQQRFFESLSRIPY-VTVRLGRLHRRFDGTLVEKG-VDVAIAVESLSLAYENAYDTVLLV 120 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 SGDG + LV A++RK K V ++ L AD F L L Sbjct: 121 SGDGDYVQLVEAIKRKGKHVECAMFRNQ----SAGVLIEYADVFHPLDDL 166 >gi|300087254|ref|YP_003757776.1| hypothetical protein Dehly_0124 [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299526987|gb|ADJ25455.1| protein of unknown function DUF88 [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 227 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 40/174 (22%), Positives = 67/174 (38%), Gaps = 10/174 (5%) Query: 1 MFDPREKIALFIDGANLYASSKAL--GFDIDYRKLLKAFRSRAIVIRAYYYTTVVG--DP 56 M + +++ +FIDG+N+Y S KA DID K +IR YYY VG + Sbjct: 1 MAERDDRVMIFIDGSNMYHSLKAHWHRSDIDLSKFCAKLVGERRLIRIYYYNVEVGQREE 60 Query: 57 EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTEN-CGRKRVKSSMDVELAVDAFEQ--SEGL 113 +++ D + + + +T + +DV LA D Sbjct: 61 PERYKDQKVFFDSVEAMPYTELRLGRLVYTSGWPNTPPFEKGVDVMLATDMLTHCFKNNY 120 Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 ++ +GD F + A++ K V + S LR+ AD D+ Sbjct: 121 NTAILVAGDADFVGALQAVKDYGKHVEVALF---GEEGTSVPLRKVADVVHDID 171 >gi|254417286|ref|ZP_05031030.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC 7420] gi|196175939|gb|EDX70959.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC 7420] Length = 110 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 34/103 (33%), Positives = 62/103 (60%), Gaps = 8/103 (7%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 + + R ++A+FIDG+NL+ ++ LG +IDY KLL + + ++R+++YT V E+Q Sbjct: 16 VLENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLVRLTAGSRLLRSFFYTGVDRTNEKQ- 74 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELA 103 L W+ NG++V+AK + + K+++DVE+A Sbjct: 75 ---QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIA 110 >gi|330952960|gb|EGH53220.1| hypothetical protein PSYCIT7_16619 [Pseudomonas syringae Cit 7] Length = 117 Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 27/123 (21%), Positives = 50/123 (40%), Gaps = 12/123 (9%) Query: 45 RAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAV 104 A+ Y GD +QQ L GF V K + ++ K DV + + Sbjct: 1 HAFAYAIDRGDSKQQQ-----FQQILRNLGFTVRLKPYIQRSDGS----AKGDWDVGITI 51 Query: 105 DAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 D + + ++ +V+ SGDG F L+ + K + + P + ++ L R A ++ Sbjct: 52 DIMDFAPQVDEIVLASGDGDFDMLLERVISK---HGVEAVAYGVPGLTANSLIRAASRYV 108 Query: 165 DLA 167 + Sbjct: 109 PIE 111 >gi|73748197|ref|YP_307436.1| hypothetical protein cbdb_A289 [Dehalococcoides sp. CBDB1] gi|147668972|ref|YP_001213790.1| hypothetical protein DehaBAV1_0326 [Dehalococcoides sp. BAV1] gi|289432247|ref|YP_003462120.1| hypothetical protein DehalGT_0297 [Dehalococcoides sp. GT] gi|73659913|emb|CAI82520.1| conserved hypothetical protein [Dehalococcoides sp. CBDB1] gi|146269920|gb|ABQ16912.1| protein of unknown function DUF88 [Dehalococcoides sp. BAV1] gi|288945967|gb|ADC73664.1| protein of unknown function DUF88 [Dehalococcoides sp. GT] Length = 194 Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 36/170 (21%), Positives = 68/170 (40%), Gaps = 9/170 (5%) Query: 1 MFDPREKIALFIDGANLYASSKAL--GFDIDYRKLLKAFRSRAIVIRAYYYTTVVG--DP 56 M D E++ +FIDG+N+Y K+ DID+ ++R YYY VG + Sbjct: 1 MTDTLERVMIFIDGSNMYHYLKSHFQRTDIDFGCFCSKIAGHRRLVRIYYYNAEVGRKEE 60 Query: 57 EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLE 114 ++F+ L + + ++ + +DV L+ D + Sbjct: 61 PERFNDQKKFFTSLEKIPYMELRLGRLVYSGWPATPPYEKGVDVLLSTDMLSHGFKNNFD 120 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 ++ +GD F + + A++ K V + S +LR+ AD + Sbjct: 121 TAILVAGDSDFVSALQAVKDNGKNVEVALF---GKESTSVELRKVADKII 167 >gi|270307718|ref|YP_003329776.1| hypothetical protein DhcVS_287 [Dehalococcoides sp. VS] gi|270153610|gb|ACZ61448.1| hypothetical protein DhcVS_287 [Dehalococcoides sp. VS] Length = 194 Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats. Identities = 37/170 (21%), Positives = 69/170 (40%), Gaps = 9/170 (5%) Query: 1 MFDPREKIALFIDGANLYASSKAL--GFDIDYRKLLKAFRSRAIVIRAYYYTTVVG--DP 56 M D E++ +FIDG+N+Y K+ DID+ R ++R YYY VG + Sbjct: 1 MTDTLERVMIFIDGSNMYHYLKSHFQRTDIDFGCFCSKIAGRRRLVRIYYYNAEVGRKEE 60 Query: 57 EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLE 114 ++F+ L + + ++ + +DV L+ D + Sbjct: 61 PERFNDQRKFFTSLEKISYMELRLGRLVYSGWPSTPPYEKGVDVLLSTDMLSHGFKNNFD 120 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 ++ +GD F + + A++ K V + S +LR+ AD + Sbjct: 121 TAILVAGDSDFVSALQAVKDNGKNVEVALF---GKERTSMELRKVADKII 167 >gi|282895639|ref|ZP_06303764.1| hypothetical protein CRD_00263 [Raphidiopsis brookii D9] gi|281199333|gb|EFA74198.1| hypothetical protein CRD_00263 [Raphidiopsis brookii D9] Length = 96 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 4/81 (4%) Query: 96 SSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQ 155 +++VE+AVD + + V+ SGDG V A+ +V ++ +M SD Sbjct: 5 PNLNVEIAVDMITLAPYYDTAVLVSGDGDLAYAVNAVTSLGSRVEVI----GLQTMTSDS 60 Query: 156 LRRQADYFMDLAYLKNEIARD 176 L ADYF+D +K I +D Sbjct: 61 LIDVADYFIDFDSIKQYIQKD 81 >gi|57234893|ref|YP_181094.1| hypothetical protein DET0347 [Dehalococcoides ethenogenes 195] gi|57225341|gb|AAW40398.1| conserved hypothetical protein [Dehalococcoides ethenogenes 195] Length = 194 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 36/173 (20%), Positives = 69/173 (39%), Gaps = 9/173 (5%) Query: 1 MFDPREKIALFIDGANLYASSKAL--GFDIDYRKLLKAFRSRAIVIRAYYYTTVVG--DP 56 M D E++ +FIDG+N+Y K+ DID+ R ++R YYY VG + Sbjct: 1 MTDTLERVMIFIDGSNMYHYLKSHFQRTDIDFGCFCSKIAGRRRLVRIYYYNAEVGRKEE 60 Query: 57 EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLE 114 ++F+ + + ++ + +DV L+ D + Sbjct: 61 PERFNDQKKFFSSPEKISYMELRLGRLVYSGWPSTPPYEKGVDVLLSTDMLSHGFKNNFD 120 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 ++ +GD F + + A++ K V + S +LR+ AD + + Sbjct: 121 TAILVAGDSDFVSALQAVKDNGKNVEVALF---GKETTSMELRKVADKTITID 170 >gi|196234013|ref|ZP_03132849.1| protein of unknown function DUF88 [Chthoniobacter flavus Ellin428] gi|196221952|gb|EDY16486.1| protein of unknown function DUF88 [Chthoniobacter flavus Ellin428] Length = 180 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 36/171 (21%), Positives = 76/171 (44%), Gaps = 13/171 (7%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ---QF 60 P+ ++ + +D +N+ +++K +D+ KL + ++ Y + + + Sbjct: 10 PQRRVLILVDESNVTSAAKVTNRKLDWLKLRDHLVNGRELLEMVVYVGLPPAMPEWQAER 69 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGL--EHLVI 118 + + WL NGF VV+K K+++DV +A+D E S + + +++ Sbjct: 70 DKKNKFVFWLRSNGFLVVSKD----GSPADESHYKANVDVLMAIDGVELSTEMQPDVVIL 125 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 +GD F L L+R+ +V S + + L+ A+ +DL L Sbjct: 126 VTGDADFAELALRLRRRGIRVEAASVAHTLGA----GLKTSANGIIDLGPL 172 >gi|108802863|ref|YP_642800.1| hypothetical protein Rxyl_0007 [Rubrobacter xylanophilus DSM 9941] gi|108764106|gb|ABG02988.1| protein of unknown function DUF88 [Rubrobacter xylanophilus DSM 9941] Length = 487 Score = 99.8 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 44/168 (26%), Positives = 71/168 (42%), Gaps = 14/168 (8%) Query: 6 EKIALFIDGANLY-ASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 E +A+FID N+Y ++ G + +L+ R ++ A Y + P Sbjct: 102 EDLAIFIDWENIYISTVSEYGAKPNVSAILEKAREYGRIVSATAYADWTDGEFRDAPPT- 160 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAV---DAFEQSEGLEHLVIFSG 121 L+ NG A+ F +KR +S+DV LAV D ++ V+ +G Sbjct: 161 -----LYSNGISPRYISARYFPGGKSQKRRTNSIDVMLAVECVDFLHNHPQVDTYVLVTG 215 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 DG F LV L+ + K V ++ + S L AD+F+ A L Sbjct: 216 DGDFIPLVNLLRSRGKVVVVIGVSEA----TSYHLIESADHFISYASL 259 >gi|282895638|ref|ZP_06303763.1| Protein of unknown function DUF88 [Raphidiopsis brookii D9] gi|281199332|gb|EFA74197.1| Protein of unknown function DUF88 [Raphidiopsis brookii D9] Length = 156 Score = 97.9 bits (243), Expect = 5e-19, Method: Composition-based stats. Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 4/90 (4%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 R ++A+FIDG NL+ ++ +G +IDY KLL + ++RA++YT V E+Q Sbjct: 55 NRGRVAIFIDGLNLFHAALQIGIEIDYVKLLCRLTQTSRLLRAFFYTGVDTSKEKQ---- 110 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKR 93 L W+ NG++VV K TEN + + Sbjct: 111 QGFLLWMRRNGYRVVTKDIIALTENGKKPK 140 >gi|148657548|ref|YP_001277753.1| hypothetical protein RoseRS_3445 [Roseiflexus sp. RS-1] gi|148569658|gb|ABQ91803.1| protein of unknown function DUF88 [Roseiflexus sp. RS-1] Length = 842 Score = 90.6 bits (224), Expect = 9e-17, Method: Composition-based stats. Identities = 40/168 (23%), Positives = 75/168 (44%), Gaps = 18/168 (10%) Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 +PR +A+FID N+Y S + L + ++ ++ V+ A Y + Sbjct: 36 NPRLDVAVFIDFENVYVSVRDKLDVNPNFEIIMDRVADLGRVVIARAYA--------DWY 87 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGR--KRVKSSMDVELAVDAFEQS---EGLEHL 116 + L+ NG + + + + GR + +K+S+D+ L +DA + + Sbjct: 88 RYPRVTSALYANGIEPMYVPTYYYDRDLGRTGRAIKNSVDMNLCIDAMKTLYTNPNIAKF 147 Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 V+ +GD F LV A+++ K+V I+ AS L + AD F+ Sbjct: 148 VLATGDRDFIPLVNAIRQHGKEVIII----GVGGAASGHLAQSADEFI 191 >gi|156744317|ref|YP_001434446.1| hypothetical protein Rcas_4412 [Roseiflexus castenholzii DSM 13941] gi|156235645|gb|ABU60428.1| protein of unknown function DUF88 [Roseiflexus castenholzii DSM 13941] Length = 787 Score = 89.0 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 40/168 (23%), Positives = 75/168 (44%), Gaps = 18/168 (10%) Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 +PR +A+FID N+Y S + L + ++ ++ V+ A Y + Sbjct: 5 NPRLDVAVFIDFENVYVSVRDKLDVNPNFEIIMDRVADLGRVVIARAYA--------DWY 56 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGR--KRVKSSMDVELAVDAFEQS---EGLEHL 116 + L+ NG + + + + GR + +K+S+D+ L +DA + + Sbjct: 57 RYPRVTSALYANGIEPMYVPTYYYDRDLGRTGRAIKNSVDMNLCIDAMKTLYTNPNIGKF 116 Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 V+ +GD F LV A+++ K+V I+ AS L + AD F+ Sbjct: 117 VLATGDRDFIPLVNAIRQHGKEVIII----GVGGAASGHLAQSADEFI 160 >gi|219850544|ref|YP_002464977.1| hypothetical protein Cagg_3705 [Chloroflexus aggregans DSM 9485] gi|219544803|gb|ACL26541.1| protein of unknown function DUF88 [Chloroflexus aggregans DSM 9485] Length = 600 Score = 88.6 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 42/185 (22%), Positives = 80/185 (43%), Gaps = 22/185 (11%) Query: 1 MFD-PREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ 58 M+D R +A+FID N+Y S + L ++ ++ V+ + Y Sbjct: 1 MYDQKRPDVAVFIDFENIYVSVRDKLNATPNFEAIMDRCNDLGRVVISRAYA-------- 52 Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGR--KRVKSSMDVELAVDAFEQS---EGL 113 + + L+ N + + + ++ GR + +K+S+D+ L +DA + + Sbjct: 53 DWYRYPRITSALYANAIEPIYVATYYYDKDAGRTGRAIKNSVDMNLCIDAMKTLYTNPNI 112 Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 V+ +GD F LV ++++ K+V I+ AS L + AD F+ L I Sbjct: 113 SRFVLVTGDRDFIPLVHSIRQHGKEVYII----GIGGAASTHLAQSADEFVFYEQL---I 165 Query: 174 ARDPD 178 R P+ Sbjct: 166 GRQPN 170 >gi|163848259|ref|YP_001636303.1| hypothetical protein Caur_2709 [Chloroflexus aurantiacus J-10-fl] gi|163669548|gb|ABY35914.1| protein of unknown function DUF88 [Chloroflexus aurantiacus J-10-fl] Length = 669 Score = 87.9 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 42/184 (22%), Positives = 79/184 (42%), Gaps = 22/184 (11%) Query: 1 MFD-PREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ 58 M+D R +A+FID N+Y S + L ++ ++ V+ + Y Sbjct: 18 MYDQKRPDVAVFIDFENIYVSVRDKLNATPNFEAIMDRCNDLGRVVISRAYA-------- 69 Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGR--KRVKSSMDVELAVDAFEQS---EGL 113 + + L+ N + + + ++ GR + +K+S+D+ L +DA + + Sbjct: 70 DWYRYPRITSALYANAIEPIYVATYYYDKDAGRTGRAIKNSVDMNLCIDAMKTLYTNPNV 129 Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 V+ +GD F LV ++++ K+V I+ AS L + AD F+ L I Sbjct: 130 ARFVLVTGDRDFIPLVHSIRQHGKEVYII----GIGGAASTHLAQSADEFVFYEQL---I 182 Query: 174 ARDP 177 R P Sbjct: 183 GRQP 186 >gi|149917268|ref|ZP_01905767.1| hypothetical protein PPSIR1_40335 [Plesiocystis pacifica SIR-1] gi|149821875|gb|EDM81269.1| hypothetical protein PPSIR1_40335 [Plesiocystis pacifica SIR-1] Length = 474 Score = 87.9 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 45/174 (25%), Positives = 72/174 (41%), Gaps = 24/174 (13%) Query: 5 REKIALFIDGANLYA----SSKALGF-DI--DYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 ++IA+FID NL + + G DI D +L++ R +I A Y + Sbjct: 4 NDRIAMFIDFENLVYGLENTEQHEGRADIALDVERLVRFARDEGRLIVARAYA------D 57 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEH 115 + + + L+ G + + + + VK+S+DV LAVDA E + Sbjct: 58 WRSASVRQHQRDLYVQGIEPINVLGRRHGSE-----VKNSVDVALAVDAVESLFERDYDT 112 Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 V+ SGD F L+ ++ K+V VS AS L D F+ L Sbjct: 113 FVLISGDRDFLPLLRCIRSHGKRVVGVS----VRESASRDLPNLCDRFVFYRDL 162 >gi|222526169|ref|YP_002570640.1| hypothetical protein Chy400_2928 [Chloroflexus sp. Y-400-fl] gi|222450048|gb|ACM54314.1| protein of unknown function DUF88 [Chloroflexus sp. Y-400-fl] Length = 652 Score = 87.1 bits (215), Expect = 8e-16, Method: Composition-based stats. Identities = 42/184 (22%), Positives = 79/184 (42%), Gaps = 22/184 (11%) Query: 1 MFD-PREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ 58 M+D R +A+FID N+Y S + L ++ ++ V+ + Y Sbjct: 1 MYDQKRPDVAVFIDFENIYVSVRDKLNATPNFEAIMDRCNDLGRVVISRAYA-------- 52 Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGR--KRVKSSMDVELAVDAFEQS---EGL 113 + + L+ N + + + ++ GR + +K+S+D+ L +DA + + Sbjct: 53 DWYRYPRITSALYANAIEPIYVATYYYDKDAGRTGRAIKNSVDMNLCIDAMKTLYTNPNV 112 Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 V+ +GD F LV ++++ K+V I+ AS L + AD F+ L I Sbjct: 113 ARFVLVTGDRDFIPLVHSIRQHGKEVYII----GIGGAASTHLAQSADEFVFYEQL---I 165 Query: 174 ARDP 177 R P Sbjct: 166 GRQP 169 >gi|134298416|ref|YP_001111912.1| hypothetical protein Dred_0543 [Desulfotomaculum reducens MI-1] gi|134051116|gb|ABO49087.1| protein of unknown function DUF88 [Desulfotomaculum reducens MI-1] Length = 180 Score = 87.1 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 41/182 (22%), Positives = 71/182 (39%), Gaps = 32/182 (17%) Query: 5 REKIALFIDGAN-------LYASSKALGFDIDYRKLLKAFR--SRAIVIRAYYYTTVVGD 55 +++ +FIDG N LY+ S+ IDY KL + R YYYT + Sbjct: 1 MKRVMVFIDGNNFEKAVTNLYSGSQQ---RIDYSKLANYLAGKRNGNLQRLYYYTAASNN 57 Query: 56 PEQQFSPLHPLLDWLHY--------NGF-QVVAKVAKEFTENCGRKRVKSSMDVELAVDA 106 +Q+ + +D L+ G+ QVV K A + + DV +AVD Sbjct: 58 DKQKAASTKNFVDTLNKQVPNCIAKIGYLQVVGKDA-----SGQDIYTEKGTDVNIAVDL 112 Query: 107 FEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 + + ++ S D + V +++ K V ++ V + L+ D + Sbjct: 113 VSLAFFNAYDEAILLSADTDYEPAVNMVRQFGKTV-VLGIVDRQK---AGYLKGLCDDHI 168 Query: 165 DL 166 L Sbjct: 169 SL 170 >gi|320103701|ref|YP_004179292.1| hypothetical protein Isop_2164 [Isosphaera pallida ATCC 43644] gi|319750983|gb|ADV62743.1| hypothetical protein Isop_2164 [Isosphaera pallida ATCC 43644] Length = 294 Score = 87.1 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 42/178 (23%), Positives = 68/178 (38%), Gaps = 31/178 (17%) Query: 3 DPREKIALFIDGANL---YASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59 + +A+F+D NL + + K F+I K+L+ + +I Y Sbjct: 5 EHDRNLAVFVDLENLAMGFQNQKKARFEI--HKVLERLVEKGKLIVKKAYA--------- 53 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRV--KSSMDVELAVDAFEQS---EGLE 114 DW Y + A R+ K+S D+ L VDA + + ++ Sbjct: 54 --------DWNRYQAYTAPFHEAAIELIEIPRRSQTGKNSADIRLVVDAMDLAWSKPHVD 105 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 VI SGD F+ LV+ L+ K V L S+ LR D F+ L+ + Sbjct: 106 TFVIVSGDSDFSPLVSKLKENGKHV----IGLGMKGSTSELLRDNCDEFIYYEDLERQ 159 >gi|85859964|ref|YP_462166.1| putative cytoplasmic protein [Syntrophus aciditrophicus SB] gi|85723055|gb|ABC77998.1| hypothetical cytosolic protein [Syntrophus aciditrophicus SB] Length = 196 Score = 86.3 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 42/177 (23%), Positives = 78/177 (44%), Gaps = 28/177 (15%) Query: 7 KIALFIDGANL---YASSKA---LGFDIDYRK---LLKAFRS-----RAIVIRAYYYTTV 52 + +F+DG NL Y + A +D+ + + F + VIR YYYT V Sbjct: 16 RAMVFVDGENLAIRYKAGLADAPPEKHVDFLQDVYVWSHFANIPYHVHCDVIRKYYYTAV 75 Query: 53 VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG 112 GD + + + L G + + F + GR + +D+ +A + + Sbjct: 76 QGDDPK----IEDVETQLKNIGIEA----PRVFKKKKGRPTKR--VDITIATEMLTHAHR 125 Query: 113 --LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 + ++ +GD + LV A+Q + ++V ++ DP + S +L ADYF D++ Sbjct: 126 GNYDIAILVAGDEDYVPLVKAVQDEGRRV-VLWFFEGDPGL-SKKLEMAADYFFDIS 180 >gi|171315862|ref|ZP_02905092.1| protein of unknown function DUF88 [Burkholderia ambifaria MEX-5] gi|171098958|gb|EDT43746.1| protein of unknown function DUF88 [Burkholderia ambifaria MEX-5] Length = 131 Score = 85.9 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 5/113 (4%) Query: 28 IDYRKLLK-AFRSRAIVIRAYYYTTVVGDPE----QQFSPLHPLLDWLHYNGFQVVAKVA 82 + Y L A R+ A + R + Y + + + L GF+V K Sbjct: 9 MRYEVLRSLAGRAGATIQRLHAYLSFDERRAARSPDYDARIKGYQAALRDKGFRVTIKPL 68 Query: 83 KEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRK 135 + + + G + VKS+ D+ +A+DA +S+ L+ ++I + DG F +V ALQ+K Sbjct: 69 RHYADEDGTETVKSNSDLGMAIDALSESDRLDTVLIATSDGDFVEVVRALQKK 121 >gi|323701153|ref|ZP_08112828.1| protein of unknown function DUF88 [Desulfotomaculum nigrificans DSM 574] gi|323533755|gb|EGB23619.1| protein of unknown function DUF88 [Desulfotomaculum nigrificans DSM 574] Length = 180 Score = 85.9 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 39/179 (21%), Positives = 67/179 (37%), Gaps = 26/179 (14%) Query: 5 REKIALFIDGANLYASSKAL----GFDIDYRKLLKAFR--SRAIVIRAYYYTTVVGDPEQ 58 +++ +FIDG N + L IDY KL + R YYYT + +Q Sbjct: 1 MKRVMVFIDGNNFEKAVTNLYGGSQQRIDYSKLANYLAGKRNGNLQRLYYYTAASDNDKQ 60 Query: 59 QFSPLHPLLDWLHY--------NGF-QVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ 109 + + +D L+ G+ QVV K A + + DV +AVD Sbjct: 61 KAASTKHFVDTLNKQVPNCIAKIGYLQVVGKDA-----SGQDIYTEKGTDVNIAVDLVSL 115 Query: 110 S--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 + + ++ S D + V ++ K V ++ V + L+ D + L Sbjct: 116 AFFNAYDEAILLSADTDYEPAVNMARQLGKTV-VLGIVDRQK---AGYLKGLCDDHISL 170 >gi|168703228|ref|ZP_02735505.1| hypothetical protein GobsU_27096 [Gemmata obscuriglobus UQM 2246] Length = 532 Score = 84.8 bits (209), Expect = 4e-15, Method: Composition-based stats. Identities = 41/170 (24%), Positives = 68/170 (40%), Gaps = 32/170 (18%) Query: 8 IALFIDGANLYASSKALGFD-----IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 +A+FID N+ LGF+ + K+L+ + ++ Y +S Sbjct: 13 LAVFIDFENM-----GLGFNNRRDRFEISKVLERLVEKGKIVCKKAYA--------DWSR 59 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIF 119 LH + +++ + T K+S D+ L VDA + + + ++ VI Sbjct: 60 FGMYTGALHESAIELIEIPRRGMT-------GKNSADIRLVVDAIDLAYSKDHIDTFVIV 112 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 SGD F+ LV+ L+ K V L SD LR D F+ L Sbjct: 113 SGDSDFSPLVSKLKELGKHV----IGLGLSDATSDLLRDNCDEFIYYEDL 158 >gi|254417374|ref|ZP_05031116.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC 7420] gi|196175809|gb|EDX70831.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC 7420] Length = 99 Score = 84.8 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 4/71 (5%) Query: 98 MDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLR 157 +DVELA+D E ++ + ++ SGDG F + +Q+ ++V +VS + S +L Sbjct: 25 LDVELALDLVELADTYDTAILVSGDGDFVPAIERIQQLSRRVEVVS----YRATTSQKLM 80 Query: 158 RQADYFMDLAY 168 + AD +++L Sbjct: 81 QLADNYLNLET 91 >gi|330955890|gb|EGH56150.1| hypothetical protein PSYCIT7_32171 [Pseudomonas syringae Cit 7] Length = 82 Score = 84.0 bits (207), Expect = 8e-15, Method: Composition-based stats. Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 6/87 (6%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIA+F D NLY + + A G +Y L R ++ A+ Y GD +QQ Sbjct: 1 MKKIAVFADVQNLYYTVRQAHGCHFNYAALWADISKRGEIVHAFAYAIDRGDSKQQQ--- 57 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCG 90 L GF V K + ++ Sbjct: 58 --FQQILRNLGFTVRLKPYIQRSDGSA 82 >gi|309789837|ref|ZP_07684416.1| hypothetical protein OSCT_0367 [Oscillochloris trichoides DG6] gi|308228141|gb|EFO81790.1| hypothetical protein OSCT_0367 [Oscillochloris trichoides DG6] Length = 635 Score = 82.5 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 38/185 (20%), Positives = 80/185 (43%), Gaps = 23/185 (12%) Query: 1 MFDPREK--IALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 M ++ +A+FID N+Y S + L + ++ ++ V+ + Y Sbjct: 1 MSYENKRPDVAVFIDFENVYVSVRDKLNANPNFEAIMDRCGDLGRVVISRAYA------- 53 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGR--KRVKSSMDVELAVDAFEQS---EG 112 + + L+ N + + + ++ GR + +K+S+D+ L +DA + Sbjct: 54 -DWYRYPRVTSALYANAIEPIYVATYYYDKDMGRTGRAIKNSVDMNLCIDAMKTLFTNTN 112 Query: 113 LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 + V+ +GD F LV +++++ K+V I+ AS L + AD F+ L Sbjct: 113 ISRFVLVTGDRDFIPLVNSIRQQGKEVYII----GIGGAASTHLAQSADEFVFYEQL--- 165 Query: 173 IARDP 177 + + P Sbjct: 166 VGKQP 170 >gi|269925423|ref|YP_003322046.1| protein of unknown function DUF88 [Thermobaculum terrenum ATCC BAA-798] gi|269789083|gb|ACZ41224.1| protein of unknown function DUF88 [Thermobaculum terrenum ATCC BAA-798] Length = 408 Score = 82.5 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 47/190 (24%), Positives = 81/190 (42%), Gaps = 21/190 (11%) Query: 2 FDPREKIALFIDGANLYASSKALGFDI-DYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 F + +AL+ID N+ S + + L +A V+ A Y Q Sbjct: 14 FLHQNDVALYIDWENIKYSLWNKDSRVPNATALKEAASKFGRVVVARAYANWQEHQHQLD 73 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRK---RVKSSMDVELAVDAFEQS---EGLE 114 + L+ G + + + +T K R K+S+DV+L VDA + + Sbjct: 74 P------NDLYSAGIEPIYVPTRTYTSTDAVKTNNRRKNSVDVKLTVDAVDFCLSNPNIH 127 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF----MDLAYLK 170 V+ +GDG F LV AL+ + ++V ++ S S QL ADYF +++ + Sbjct: 128 TFVLVTGDGDFIHLVNALRSRGREVVVIGCSWS----TSWQLTSMADYFIPYDIEVDPIY 183 Query: 171 NEIARDPDED 180 +++ D ED Sbjct: 184 DKVGEDNTED 193 >gi|159899759|ref|YP_001546006.1| hypothetical protein Haur_3241 [Herpetosiphon aurantiacus ATCC 23779] gi|159892798|gb|ABX05878.1| protein of unknown function DUF88 [Herpetosiphon aurantiacus ATCC 23779] Length = 789 Score = 80.9 bits (199), Expect = 6e-14, Method: Composition-based stats. Identities = 39/187 (20%), Positives = 75/187 (40%), Gaps = 27/187 (14%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDID----YRKLLKAFRSRAIVIRAYYYTTVVGDP 56 M P++ +A+FID N+Y S + D + L++ V+ A Y Sbjct: 29 MNKPKQDVAVFIDFENIYVSVRE---KFDATPNFEALMERCEDYGRVVVARAYA------ 79 Query: 57 EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGR--KRVKSSMDVELAVDAFEQS---E 111 + + L N + + + ++ GR + +K+S+D+ + +DA Sbjct: 80 --DWYRYPRITSALFANNIEPMYVPTYYYDKDEGRMGRPIKNSVDMHMCIDAMRTLYTRT 137 Query: 112 GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM---DLAY 168 + + +GD F LV ++++ K V IV AS L + AD F+ + Sbjct: 138 NIGSYIFITGDRDFIALVNCVRQEGKDVIIV----GIGGAASSHLAQSADEFLFYEQIVD 193 Query: 169 LKNEIAR 175 ++ R Sbjct: 194 IRPMGGR 200 >gi|258593302|emb|CBE69641.1| conserved protein of unknown function [NC10 bacterium 'Dutch sediment'] Length = 251 Score = 80.9 bits (199), Expect = 7e-14, Method: Composition-based stats. Identities = 42/179 (23%), Positives = 70/179 (39%), Gaps = 23/179 (12%) Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 + +++ALFID N+ K A + +L+ + ++ Y + Sbjct: 2 NEEKRLALFIDFENIAIGIKEAKHKQFEIGLVLERLVEKGKIMVKRAYA--------DWG 53 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVI 118 LH +++ K R K+S D+ LAVDA + + E L+ VI Sbjct: 54 RYAEHKRALHEAAIELIDIPQK-------RISGKNSADIRLAVDAMDMAYSKEHLDTFVI 106 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 SGD F+ LV+ L+ K+V L + S+ L D F+ L + P Sbjct: 107 VSGDSDFSPLVSKLRENNKEV----IGLGVKNSVSELLVDNCDEFIYYEDLIRHPKKAP 161 >gi|254417369|ref|ZP_05031111.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC 7420] gi|196175804|gb|EDX70826.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC 7420] Length = 302 Score = 80.2 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 9/93 (9%) Query: 7 KIALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 ++A+FID AN+Y S+ LGFD DY LL + + +A++YT + QQ Sbjct: 187 RVAIFIDAANIYHSALQLGFDPPDYADLLAFLKRQYSSYQAFFYTGLDSTNRQQ----KR 242 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSM 98 LL L G+++++K + + K+++ Sbjct: 243 LLFRLQNLGYKIISKEIIKRADGS----CKANL 271 >gi|114764533|ref|ZP_01443758.1| hypothetical protein 1100011001295_R2601_11629 [Pelagibaca bermudensis HTCC2601] gi|114543100|gb|EAU46119.1| hypothetical protein R2601_11629 [Roseovarius sp. HTCC2601] Length = 60 Score = 79.8 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 31/59 (52%), Positives = 45/59 (76%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59 MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + E + Sbjct: 1 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFVRRGKMVRAFYYTALLENDEYR 59 >gi|163845962|ref|YP_001634006.1| hypothetical protein Caur_0367 [Chloroflexus aurantiacus J-10-fl] gi|222523687|ref|YP_002568157.1| hypothetical protein Chy400_0393 [Chloroflexus sp. Y-400-fl] gi|163667251|gb|ABY33617.1| protein of unknown function DUF88 [Chloroflexus aurantiacus J-10-fl] gi|222447566|gb|ACM51832.1| protein of unknown function DUF88 [Chloroflexus sp. Y-400-fl] Length = 208 Score = 79.8 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 39/175 (22%), Positives = 70/175 (40%), Gaps = 27/175 (15%) Query: 7 KIALFIDGANL------YASSKALGF--DIDYRKLLKAFRSRAI-------VIRAYYYTT 51 +I +F DG+ + S K +G+ + + +L++ F S V+ A ++ Sbjct: 6 RIGVFYDGSYFTYAQFYFYSEKKVGWLSFVPFHRLIEQFVSSKEQRYAAHRVVYASWHQG 65 Query: 52 V---VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE 108 + E+QF L + G + + G +DV LA+DA E Sbjct: 66 LFHSAQTSEKQFQIERNRHIDLVHAGIEPKYVPMPPNGQEKG-------VDVSLAIDAME 118 Query: 109 QS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161 ++ ++ V+ +GDG T LV AL + +V ++ S RR D Sbjct: 119 RAMEGKIDVAVLVTGDGDLTPLVRALMKHGVRVGLLYFEYESSQRTSHVNRRLLD 173 >gi|116626906|ref|YP_829062.1| hypothetical protein Acid_7883 [Candidatus Solibacter usitatus Ellin6076] gi|116230068|gb|ABJ88777.1| protein of unknown function DUF88 [Candidatus Solibacter usitatus Ellin6076] Length = 451 Score = 79.0 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 39/178 (21%), Positives = 72/178 (40%), Gaps = 23/178 (12%) Query: 3 DPREKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 + + KIA+FID N+ K+ L + D +L A + R ++ + Y + Sbjct: 2 EQKLKIAVFIDFDNIEIGVKSTLHREFDVAAVLDALKERGEIVTKFAYA--------NWG 53 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHL---VI 118 L + Q+V + + G D+ LA+DA E + +H+ I Sbjct: 54 RQESATRALSEHAVQMVQRDPSPRGDKNG-------ADINLALDALEMAFTHDHINAFAI 106 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 SGD F LV L++ K++ +V + S L++ F+ + ++ R Sbjct: 107 VSGDSDFIALVNKLKQYDKRIFVV----GGRAFTSTILQKNCHEFVAYESVMDDKPRS 160 >gi|294495770|ref|YP_003542263.1| hypothetical protein Mmah_1111 [Methanohalophilus mahii DSM 5219] gi|292666769|gb|ADE36618.1| protein of unknown function DUF88 [Methanohalophilus mahii DSM 5219] Length = 206 Score = 79.0 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 41/194 (21%), Positives = 75/194 (38%), Gaps = 51/194 (26%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFR-----------------------SRAIV 43 ++ +FIDG NL +Y LLK + + Sbjct: 23 RMMVFIDGENLV---------FNYLSLLKNGKVPNDPVQHEKDVFVWHINSVVNPQFHEI 73 Query: 44 IRAYYYTTVVGDPE------QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSS 97 IRA YYT + G E ++ + P L +N + VV K K+ ++ G Sbjct: 74 IRANYYTYITGSDETIIDQIKKLAYARPPRSKLPHNLYPVVFKKPKKRAQSKG------- 126 Query: 98 MDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQ 155 +D+++ VD Q ++ + +F+GDG + ++ R K+V + + + + Sbjct: 127 VDIQMTVDILSQVYNNNIDTVYLFAGDGDYLPVINEAIRMGKQVYLAAFSHGL----NKK 182 Query: 156 LRRQADYFMDLAYL 169 L + D F L + Sbjct: 183 LVNKVDQFHLLDDI 196 >gi|293605834|ref|ZP_06688205.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] gi|292815747|gb|EFF74857.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] Length = 673 Score = 77.9 bits (191), Expect = 5e-13, Method: Composition-based stats. Identities = 46/187 (24%), Positives = 70/187 (37%), Gaps = 25/187 (13%) Query: 1 MFDPREKI--ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 M P E + ALF D N+ + + D R +L+ + ++ Y Sbjct: 10 MTTPNENVSMALFCDFENVALGVRDTKYQKFDIRPVLERLLLKGSIVVKKAYC------- 62 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE---QSEGLE 114 + +H F+++ R+ K+S D+ L VDA + + Sbjct: 63 -DWERYKEFKAPMHEANFELIEIPHV-------RQSGKNSADIRLVVDALDFCYTKSHVN 114 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 VI SGD F+ LV+ L+ KKV V S SD L D F+ L EI Sbjct: 115 TFVIISGDSDFSPLVSKLRENNKKVIGVGVKQS----TSDLLIANCDEFIFYDDLAREIQ 170 Query: 175 RDPDEDK 181 R D + Sbjct: 171 RTADARR 177 >gi|217970117|ref|YP_002355351.1| hypothetical protein Tmz1t_1700 [Thauera sp. MZ1T] gi|217507444|gb|ACK54455.1| protein of unknown function DUF88 [Thauera sp. MZ1T] Length = 564 Score = 77.9 bits (191), Expect = 5e-13, Method: Composition-based stats. Identities = 38/182 (20%), Positives = 68/182 (37%), Gaps = 28/182 (15%) Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 ALF D N+ + + D +++L+ + ++ Y + Sbjct: 11 ALFCDFENVALGVRDAKYEKFDIKRVLERLLLKGSIVVKKAYC--------DWDRYKSFK 62 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124 +H F+++ R+ K+S D+ L VDA + ++ VI SGD Sbjct: 63 AAMHEANFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVDTFVIISGDSD 115 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL-----KNEIARDPDE 179 F+ LV+ L+ K+V V S SD L D F+ L + R+ + Sbjct: 116 FSPLVSKLRENAKQVIGVGVKQS----TSDLLIANCDEFIFYDDLVRDSQRAAAKREARD 171 Query: 180 DK 181 + Sbjct: 172 NP 173 >gi|229541784|ref|ZP_04430844.1| protein of unknown function DUF88 [Bacillus coagulans 36D1] gi|229326204|gb|EEN91879.1| protein of unknown function DUF88 [Bacillus coagulans 36D1] Length = 179 Score = 77.9 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 40/177 (22%), Positives = 71/177 (40%), Gaps = 23/177 (12%) Query: 5 REKIALFIDGAN-------LYASSKALGFDIDYRKLLKAFRSRAI--VIRAYYYTTVVGD 55 +++ +FIDG N LY S + L DY KL + +R + R YYYT V Sbjct: 1 MKRVMVFIDGNNFEAALTALYGSQQRL----DYLKLAEYVAARRDGILQRIYYYTAVGSL 56 Query: 56 PEQQFSPLHPLLDWLHYNGFQVVAKVA---KEFTENCGRK-RVKSSMDVELAVDAFEQS- 110 +++ + +D L+ + +AK+ G+ + DV +AVD + Sbjct: 57 DKEKAAATKLFIDHLNKKVPKCIAKLGYLSVVGINALGKPIFTEKGTDVNIAVDLVSLAF 116 Query: 111 -EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 G + ++FS D + + + K V + V + L D ++ L Sbjct: 117 NNGYDEAILFSADTDYEAAIKMARSLGKNV-VAGVVDQQKAGYMKDL---CDEYITL 169 >gi|82703323|ref|YP_412889.1| hypothetical protein Nmul_A2205 [Nitrosospira multiformis ATCC 25196] gi|82411388|gb|ABB75497.1| Protein of unknown function DUF88 [Nitrosospira multiformis ATCC 25196] Length = 381 Score = 77.9 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 40/172 (23%), Positives = 64/172 (37%), Gaps = 23/172 (13%) Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 A+F D N+ + + D + +L+ + ++ Y + Sbjct: 11 AVFCDFENVALGVRDAKYEKFDIKPVLERLLLKGSIVIKKAYC--------DWDRYKTFK 62 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124 LH F+++ R+ K+S D+ L VDA + + VI SGD Sbjct: 63 TALHEANFELIEIPHI-------RQSGKNSADIRLVVDALDLCYTKSHVNTFVIISGDSD 115 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 F+ LV+ L+ K+V V S SD L D F+ L EI R Sbjct: 116 FSPLVSKLRENAKQVIGVGVKKS----TSDLLIANCDEFIFYDDLVREIQRT 163 >gi|302867482|ref|YP_003836119.1| hypothetical protein Micau_3012 [Micromonospora aurantiaca ATCC 27029] gi|315506110|ref|YP_004084997.1| hypothetical protein ML5_5375 [Micromonospora sp. L5] gi|302570341|gb|ADL46543.1| protein of unknown function DUF88 [Micromonospora aurantiaca ATCC 27029] gi|315412729|gb|ADU10846.1| protein of unknown function DUF88 [Micromonospora sp. L5] Length = 356 Score = 77.5 bits (190), Expect = 7e-13, Method: Composition-based stats. Identities = 43/175 (24%), Positives = 64/175 (36%), Gaps = 23/175 (13%) Query: 3 DPREKIALFIDGANLYASSKAL--GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 D ++IALF+D NL + G D+R + A R V+ Y E + Sbjct: 2 DHEDRIALFLDYENLALGVRDHHGGRPFDFRPIADALAERGRVVVRRAYADWSYFDEDRR 61 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLV 117 + E + G R + D+++AVDA E + + V Sbjct: 62 MLTRSHV-------------ELIEIPQRMGASRKNA-ADIKMAVDAVELAFERGYISTFV 107 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 I +GD FT LV L+ K+V V S S L D F+ L+ Sbjct: 108 ICTGDSDFTPLVHKLRELNKRVIGVGVEKS----TSALLPPACDEFLYYDRLEGV 158 >gi|330820543|ref|YP_004349405.1| hypothetical protein bgla_2g14470 [Burkholderia gladioli BSR3] gi|327372538|gb|AEA63893.1| hypothetical protein bgla_2g14470 [Burkholderia gladioli BSR3] Length = 525 Score = 77.5 bits (190), Expect = 8e-13, Method: Composition-based stats. Identities = 42/185 (22%), Positives = 72/185 (38%), Gaps = 25/185 (13%) Query: 1 MFDPREKI--ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 M P++ + ALF D N+ + F+ D + +L+ + ++ Y Sbjct: 1 MALPQDSVNMALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC------- 53 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLE 114 + +H F+++ R+ K+S D+ L VDA + ++ Sbjct: 54 -DWDRYKTFKGAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVD 105 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 VI SGD F+ LV+ L+ K+V V S SD L D F+ L E+ Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFIFYDDLARELQ 161 Query: 175 RDPDE 179 R + Sbjct: 162 RAQAK 166 >gi|238059538|ref|ZP_04604247.1| hypothetical protein MCAG_00504 [Micromonospora sp. ATCC 39149] gi|237881349|gb|EEP70177.1| hypothetical protein MCAG_00504 [Micromonospora sp. ATCC 39149] Length = 367 Score = 77.1 bits (189), Expect = 9e-13, Method: Composition-based stats. Identities = 43/175 (24%), Positives = 64/175 (36%), Gaps = 23/175 (13%) Query: 3 DPREKIALFIDGANLYASSKAL--GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 D ++IALF+D NL ++ G D R + A R V+ Y E + Sbjct: 5 DHEDRIALFLDYENLALGAREHLGGMAFDLRPIADALAERGRVVVRRAYADWSFFDEDRR 64 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLV 117 + E + G R + D+++AVDA E + + V Sbjct: 65 MLTRSHV-------------ELIEMPQRMGASRKNA-ADIKMAVDAVELAFERAYVSTFV 110 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 I +GD FT LV L+ K+V V S S L D F+ L+ Sbjct: 111 ICTGDSDFTPLVHKLRELNKRVIGVGVEKS----TSALLPPACDEFLYYDRLEGV 161 >gi|71908802|ref|YP_286389.1| hypothetical protein Daro_3189 [Dechloromonas aromatica RCB] gi|71848423|gb|AAZ47919.1| Protein of unknown function DUF88 [Dechloromonas aromatica RCB] Length = 421 Score = 76.7 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 40/180 (22%), Positives = 72/180 (40%), Gaps = 25/180 (13%) Query: 9 ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 ALF D N+ + ++ D R +L+ ++ ++ Y + Sbjct: 11 ALFCDFENIALGVRDAQYEKFDIRPVLERLLAKGSIVVKKAYC--------DWDRYKAFK 62 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124 +H F+++ R+ K+S D+ + VDA + ++ VI SGD Sbjct: 63 AAMHEANFELIEIPHV-------RQSGKNSADIRMVVDALDLCYTKAHVDTFVIISGDSD 115 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL-KN-EIARDPDEDKK 182 F+ LV+ L+ K+V V S SD L D F+ L ++ E R P + ++ Sbjct: 116 FSPLVSKLRENAKRVIGVGVKQSC----SDLLVTNCDEFIYYDDLVRDREAGRGPQQRRE 171 >gi|303247327|ref|ZP_07333600.1| protein of unknown function DUF88 [Desulfovibrio fructosovorans JJ] gi|302491241|gb|EFL51130.1| protein of unknown function DUF88 [Desulfovibrio fructosovorans JJ] Length = 193 Score = 76.7 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 34/190 (17%), Positives = 62/190 (32%), Gaps = 29/190 (15%) Query: 11 FIDGANLYASSKALGFD--IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLD 68 ID +Y D IDY KL + RAYY +V + + Sbjct: 8 LIDAGYMYRGQSIYNRDYSIDYVKLRNKLEIEEPLWRAYYLNSVPNPTPDAQVSFYNWMR 67 Query: 69 WLHYNGFQVVAKVAKEFTEN-----------------------CGRKRVKSSMDVELAVD 105 G +++ K+ + + + + +DV LA Sbjct: 68 SAPPIGPKIITKLYELRSSEITDLYCEHCRRKVPVACPNDPKHRLSREQQKGVDVGLATL 127 Query: 106 AFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165 A + + L++ SGD + + K K+ ++ S L+ +AD Sbjct: 128 ALTHVDNYDTLILSSGDSDLLDAIEYITEKNKRFELLVFKNG----VSTDLQCRADRIYW 183 Query: 166 LAYLKNEIAR 175 + +E+AR Sbjct: 184 IDDFASEVAR 193 >gi|56477068|ref|YP_158657.1| hypothetical protein ebA2897 [Aromatoleum aromaticum EbN1] gi|56313111|emb|CAI07756.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1] Length = 510 Score = 76.3 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 46/185 (24%), Positives = 67/185 (36%), Gaps = 33/185 (17%) Query: 1 MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 M P E ALF D N+ + + D +++L+ + ++ Y Sbjct: 1 MASPHETASMALFCDFENVALGVRDANYEKFDIKRVLERLLLKGSIVVKKAYC------- 53 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKV----AKEFTENCGRKRVKSSMDVELAVDAFEQ---S 110 DW Y GF+ E R+ K+S D+ L VDA + Sbjct: 54 ----------DWDRYKGFKATMHEANFELIEIPHV--RQSGKNSADIRLVVDALDLCYTK 101 Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170 + VI SGD F+ LV+ L+ K+V V S SD L D F+ L Sbjct: 102 SHVNTFVIISGDSDFSPLVSKLRENAKQVIGVGVKQS----TSDLLIANCDEFIFYDDLV 157 Query: 171 NEIAR 175 E R Sbjct: 158 RESQR 162 >gi|206896404|ref|YP_002247532.1| hypothetical protein COPRO5265_1226 [Coprothermobacter proteolyticus DSM 5265] gi|206739021|gb|ACI18099.1| protein of unknown function [Coprothermobacter proteolyticus DSM 5265] Length = 321 Score = 76.3 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 43/174 (24%), Positives = 76/174 (43%), Gaps = 28/174 (16%) Query: 9 ALFIDGANLYASSKAL-GFDIDYRKLLKA----FRSRAIVIRAYYYTTVVGDPEQQFSPL 63 A+F+D NL +K+L +D ++LL+ F S + A YT + Sbjct: 8 AIFLDLENL---AKSLEKYDKTPQELLQKILDTFVSMGKIDVARVYTG--------WGVF 56 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFS 120 L+ + G++VV + G VK+ D+++ VDA + + ++ V S Sbjct: 57 ASLIPFAVDMGYEVVF----VYAHRSGS-VVKNMADMQITVDALKLGYERDSIDAFVFVS 111 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 D F ++ ALQ K+V ++ D + S+ L+ AD F+ L L + Sbjct: 112 ADRDFIPVIKALQGLGKEVVVI----GDEQITSEALKNTADAFVSLNELAGGLK 161 >gi|88810791|ref|ZP_01126048.1| hypothetical protein NB231_16963 [Nitrococcus mobilis Nb-231] gi|88792421|gb|EAR23531.1| hypothetical protein NB231_16963 [Nitrococcus mobilis Nb-231] Length = 196 Score = 75.9 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 39/192 (20%), Positives = 69/192 (35%), Gaps = 32/192 (16%) Query: 11 FIDGANLYAS-SKALGFD--IDYRKLLKAFRSR-AIVIRAYYYTTVVGDPEQQFSPLHPL 66 IDG+ ++A+ + G +DY +L + ++ R YY +V D H Sbjct: 6 LIDGSYIHANNIQRFGPHTRVDYLRLRRLIEEHLGVLWRGYYLNSVQSDAHSARERFHSW 65 Query: 67 LDWLHYNGFQVVAKVA------------------------KEFTENCGRKRVKSSMDVEL 102 L NG ++ K+ ++ + + +DV L Sbjct: 66 LQSAAPNGPHLIVKLYGLKNERVENAFCVDCGTKIEVCCPHGGPDHHLVNQRQMGVDVGL 125 Query: 103 AVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADY 162 A A E + LV+ SGDG V L K++ + S L+ +AD Sbjct: 126 ATLALAHKERYDCLVLSSGDGDLLDAVEHLCENGKRIELAVFSTG----VSTDLQARADR 181 Query: 163 FMDLAYLKNEIA 174 + + +E+A Sbjct: 182 VLWIDDHMDELA 193 >gi|239905768|ref|YP_002952507.1| hypothetical protein DMR_11300 [Desulfovibrio magneticus RS-1] gi|239795632|dbj|BAH74621.1| hypothetical protein [Desulfovibrio magneticus RS-1] Length = 199 Score = 75.9 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 36/193 (18%), Positives = 66/193 (34%), Gaps = 29/193 (15%) Query: 11 FIDGANLYASSKALGFD--IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLD 68 ID +Y + IDY KL + + RAYY ++ + + + Sbjct: 8 LIDAGYMYRGQSYFSREYSIDYVKLRNKLEAETPIWRAYYLNSIPHPTPESQIAFYNWMR 67 Query: 69 WLHYNGFQVVAKVAKEFT---------------------ENCGRKRVK--SSMDVELAVD 105 G +++ K+ + T + R + +DV LA Sbjct: 68 SAPPQGPKIITKLYELRTSEINELYCEQCRRKVPVTCPNDRAHRLSREQQKGVDVGLATL 127 Query: 106 AFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165 A E + L++ SGD V + K K+ ++ S L+ +AD Sbjct: 128 ALTHIENYDTLILSSGDSDLLDAVEYITEKNKRFELLVFKNG----VSTDLQCRADRIWW 183 Query: 166 LAYLKNEIARDPD 178 + +E+AR+ Sbjct: 184 IDEFAHEVAREAR 196 >gi|269954862|ref|YP_003324651.1| hypothetical protein Xcel_0052 [Xylanimonas cellulosilytica DSM 15894] gi|269303543|gb|ACZ29093.1| protein of unknown function DUF88 [Xylanimonas cellulosilytica DSM 15894] Length = 470 Score = 75.9 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 38/167 (22%), Positives = 63/167 (37%), Gaps = 23/167 (13%) Query: 3 DPREKIALFIDGANLYASSKAL--GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 D E++A+F+D NL ++ G D+ + A R V+ Y E + Sbjct: 2 DNEERLAVFLDYENLALGAREHLGGMQFDFGPIADALAVRGRVVVRRAYADWSYFDEDRR 61 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLV 117 + + E + G R + D+++ VDA E + E + V Sbjct: 62 ALTRHQV-------------ELIEMPQRMGASRKNA-ADIKMVVDAIEMAFEREYISTFV 107 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 + +GD F+ LV L+ K+V V S S L D F+ Sbjct: 108 MCTGDSDFSPLVHKLRELNKRVIGVGVEKS----TSRLLPASCDEFL 150 >gi|116671994|ref|YP_832927.1| hypothetical protein Arth_3452 [Arthrobacter sp. FB24] gi|116612103|gb|ABK04827.1| protein of unknown function DUF88 [Arthrobacter sp. FB24] Length = 282 Score = 75.2 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 38/178 (21%), Positives = 67/178 (37%), Gaps = 30/178 (16%) Query: 1 MFDPREK-IALFIDGANLYASSKALGFDI----------DYRKLLKAFRSRAIVIRAYYY 49 M +++ +A+F+D NL+ K D+ D K+++ Y Sbjct: 1 MAGSQQRNVAIFLDMENLFGGYKN---DVTSVPLATVVRDIEKVVEDTGLGGQTALTRAY 57 Query: 50 TTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ 109 + L +N K + F + K++ D+EL VDA E Sbjct: 58 ANWGRADMGGYRSQL-----LAHN-----IKPVQVF---SFDQSSKNAADIELVVDALEV 104 Query: 110 S---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 + +E V+ SGDG F L+ L K+ + +T + + L+ AD+F Sbjct: 105 AADMPWIELFVVVSGDGDFVPLLRRLHALGKRSLVATTSQPKAGVVNKVLQSVADHFH 162 >gi|325107780|ref|YP_004268848.1| hypothetical protein Plabr_1213 [Planctomyces brasiliensis DSM 5305] gi|324968048|gb|ADY58826.1| protein of unknown function DUF88 [Planctomyces brasiliensis DSM 5305] Length = 245 Score = 75.2 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 36/160 (22%), Positives = 59/160 (36%), Gaps = 24/160 (15%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 K A+ +D NL K G + LL + I Y D L Sbjct: 6 KAAILLDAENLTHWIKYDG----PKTLLNELNADGSFIIRKAYARWTND------SLADF 55 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGC 124 + L GF +V K+S D++L VDA + + + ++ V+ +GD Sbjct: 56 QESLTLLGFDLV--------HTFHPVSKKNSADIQLTVDAMQFAADKTVQTFVLATGDSD 107 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F+ L L+ K T++ P S+ +R F+ Sbjct: 108 FSPLFRRLREMGK--TVIGVGKRSP--LSESVRNSCSRFI 143 >gi|167629267|ref|YP_001679766.1| hypothetical protein HM1_0800 [Heliobacterium modesticaldum Ice1] gi|167592007|gb|ABZ83755.1| hypothetical protein HM1_0800 [Heliobacterium modesticaldum Ice1] Length = 214 Score = 75.2 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 42/177 (23%), Positives = 68/177 (38%), Gaps = 16/177 (9%) Query: 6 EKIALFIDGANLYAS-SKALGF-DIDYRKLLKAFRSRAIVIRAYYYT-------TVVGDP 56 +K A+FIDG L G +DY KL K + R YYY + Sbjct: 21 DKCAIFIDGGYLDKVFQDEFGSPRVDYLKLSKWLSRGTSIFRTYYYNCLPYQSNPPTTEE 80 Query: 57 EQQFSPLHPLLDWLHYNG-FQVVA--KVAKEFTENCGRKRVKSSMDVELAVDAFEQS--E 111 Q+FS L ++V + ++ V+ +D+ L VD + Sbjct: 81 SQRFSKKQAFYGRLKQLERYEVRLGKLEFRGNRQDGTPIFVQKRVDILLGVDLALLAAKN 140 Query: 112 GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 + H IF+GD F ++ + + +T+ S+P D L R+AD + L Sbjct: 141 RITHATIFAGDSDFLPAISVAKNEGVLITLAHGGASNPPH--DDLWREADERIQLDT 195 >gi|119898953|ref|YP_934166.1| hypothetical protein azo2662 [Azoarcus sp. BH72] gi|119671366|emb|CAL95279.1| conserved hypothetical protein [Azoarcus sp. BH72] Length = 481 Score = 75.2 bits (184), Expect = 4e-12, Method: Composition-based stats. Identities = 38/165 (23%), Positives = 63/165 (38%), Gaps = 23/165 (13%) Query: 9 ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 ALF D N+ + +D D +++L+ + ++ Y + Sbjct: 11 ALFCDFENVALGVRDAKYDKFDIKRVLERLLLKGSIVVKKAYC--------DWERYKGFK 62 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124 +H F+++ R+ K+S D+ L VDA + + VI SGD Sbjct: 63 AAMHEANFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVNTFVIISGDSD 115 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 F+ LV+ L+ K+V V S SD L D F+ L Sbjct: 116 FSPLVSKLRENAKQVIGVGVKQS----TSDLLIANCDEFIFYDDL 156 >gi|134282577|ref|ZP_01769281.1| conserved hypothetical protein [Burkholderia pseudomallei 305] gi|134246134|gb|EBA46224.1| conserved hypothetical protein [Burkholderia pseudomallei 305] Length = 622 Score = 74.8 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 42/181 (23%), Positives = 70/181 (38%), Gaps = 25/181 (13%) Query: 1 MFDPREKI--ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 M P++ + ALF D N+ + F+ D + +L+ + ++ Y Sbjct: 144 MALPQDSVNMALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC------- 196 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLE 114 + +H F+++ R+ K+S D+ L VDA + ++ Sbjct: 197 -DWDRYKTFKAAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVD 248 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 VI SGD F+ LV+ L+ K+V V S SD L D F+ L E Sbjct: 249 TFVIISGDSDFSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFIFYDDLAREQQ 304 Query: 175 R 175 R Sbjct: 305 R 305 >gi|167839964|ref|ZP_02466648.1| hypothetical protein Bpse38_25044 [Burkholderia thailandensis MSMB43] Length = 445 Score = 74.8 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 41/171 (23%), Positives = 65/171 (38%), Gaps = 23/171 (13%) Query: 9 ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 ALF D N+ + F+ D R +L+ + ++ Y + Sbjct: 2 ALFCDFENIALGVRDTKFEKFDIRPVLEKLLLKGSIVVKKAYC--------DWDRYKTFK 53 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124 +H F+++ R+ K+S D+ L VDA + ++ VI SGD Sbjct: 54 AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGDSD 106 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 F+ LV+ L+ K+V V S SD L D F+ L E R Sbjct: 107 FSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFIFYDDLAREQQR 153 >gi|219848211|ref|YP_002462644.1| hypothetical protein Cagg_1300 [Chloroflexus aggregans DSM 9485] gi|219542470|gb|ACL24208.1| protein of unknown function DUF88 [Chloroflexus aggregans DSM 9485] Length = 208 Score = 74.8 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 39/195 (20%), Positives = 67/195 (34%), Gaps = 34/195 (17%) Query: 7 KIALFIDGANL------YASSKALGF--DIDYRKLLKAFRSRAIVIRA---YYYT----- 50 +I +F DG+ + + K +G+ + +L++ F S A Y Sbjct: 6 RIGVFYDGSYFSYAQTYFYAEKKVGWLSFTPFHRLIEQFISSKEQRYAMHRIVYASWHQG 65 Query: 51 --TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE 108 E+QF L + G + + K +DV LAVD E Sbjct: 66 LFPASQTNEKQFFIERNRHLDLMHAGIEPK------YVPMAPSGHEKG-VDVSLAVDVME 118 Query: 109 --QSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASD---QLRRQADYF 163 ++ V+ +GDG T L + + +V + P S +L +Y Sbjct: 119 RVMEGKIDVAVLVTGDGDLTPLARTVMKHGVRVGVFYFEYDSPQRNSRVNGRLITACNYA 178 Query: 164 MDLAYLKNEIARDPD 178 ++ L RDP Sbjct: 179 FNVNDL----ERDPR 189 >gi|311106775|ref|YP_003979628.1| hypothetical protein AXYL_03593 [Achromobacter xylosoxidans A8] gi|310761464|gb|ADP16913.1| hypothetical protein AXYL_03593 [Achromobacter xylosoxidans A8] Length = 576 Score = 74.4 bits (182), Expect = 6e-12, Method: Composition-based stats. Identities = 45/187 (24%), Positives = 69/187 (36%), Gaps = 25/187 (13%) Query: 1 MFDPREKI--ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 M P E + ALF D N+ + + D R +L+ + ++ Y Sbjct: 1 MNTPNENVSMALFCDFENVALGVRDTKYQKFDIRPVLERLLLKGSIVVKKAYC------- 53 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE---QSEGLE 114 + +H F+++ R+ K+S D+ L VDA + + Sbjct: 54 -DWERYKEFKAPMHEANFELIEIPHV-------RQSGKNSADIRLVVDALDFCYTKSHVN 105 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 VI SGD F+ LV+ L+ KKV V S SD L D F+ L E Sbjct: 106 TFVIISGDSDFSPLVSKLRENNKKVIGVGVKQS----TSDLLIANCDEFIFYDDLAREGQ 161 Query: 175 RDPDEDK 181 R D + Sbjct: 162 RAADARR 168 >gi|257094026|ref|YP_003167667.1| hypothetical protein CAP2UW1_2449 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046550|gb|ACV35738.1| protein of unknown function DUF88 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 460 Score = 74.0 bits (181), Expect = 8e-12, Method: Composition-based stats. Identities = 40/178 (22%), Positives = 66/178 (37%), Gaps = 23/178 (12%) Query: 9 ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 AL+ D N+ + +D D + +L+ + ++ Y + Sbjct: 11 ALYCDFENVALGVRDAKYDKFDIKPVLERLLLKGSIVVKKAYC--------DWERYKGFK 62 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124 +H F+++ R+ K+S D+ L VDA + ++ VI SGD Sbjct: 63 STMHEASFELIEIPHL-------RQSGKNSADIRLVVDALDLCYTKSHVDTFVIISGDSD 115 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182 F+ LV+ L+ K V V S SD L D F+ L E R D + Sbjct: 116 FSPLVSKLRENAKYVIGVGVKQS----TSDLLIGNCDEFIFYDDLVRESQRAARRDSR 169 >gi|226198540|ref|ZP_03794107.1| conserved hypothetical protein [Burkholderia pseudomallei Pakistan 9] gi|225929463|gb|EEH25483.1| conserved hypothetical protein [Burkholderia pseudomallei Pakistan 9] Length = 486 Score = 74.0 bits (181), Expect = 9e-12, Method: Composition-based stats. Identities = 42/181 (23%), Positives = 69/181 (38%), Gaps = 25/181 (13%) Query: 1 MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 M P++ + ALF D N+ + F D + +L+ + ++ Y Sbjct: 1 MALPQDSVNMALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC------- 53 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLE 114 + +H F+++ R+ K+S D+ L VDA + ++ Sbjct: 54 -DWDRYKTFKAAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVD 105 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 VI SGD F+ LV+ L+ K+V V S SD L D F+ L E Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFIFYDDLAREQQ 161 Query: 175 R 175 R Sbjct: 162 R 162 >gi|283851692|ref|ZP_06368970.1| protein of unknown function DUF88 [Desulfovibrio sp. FW1012B] gi|283572812|gb|EFC20794.1| protein of unknown function DUF88 [Desulfovibrio sp. FW1012B] Length = 193 Score = 73.6 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 35/190 (18%), Positives = 60/190 (31%), Gaps = 29/190 (15%) Query: 11 FIDGANLYASSKALGFD--IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLD 68 ID +Y + IDY KL S + RAYY +V + + Sbjct: 8 LIDAGYMYRGQSIYSREYSIDYVKLRNRLESEEPLWRAYYLNSVPHPTPDSQVAFYNWMR 67 Query: 69 WLHYNGFQVVAK---------------------VAKEFTENCGRKRVK--SSMDVELAVD 105 G +++ K + R + +DV LA Sbjct: 68 SAPPLGPKIITKLYELRSSEITDLYCEQDRRKVPVSCPNDRAHRLSREQQKGVDVGLATL 127 Query: 106 AFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165 A E + L++ SGD + + K K+ ++ S L+ +AD Sbjct: 128 ALTHIENYDTLILSSGDSDLLDAIEYITEKNKRFELLVFKNG----VSTDLQCRADRIYW 183 Query: 166 LAYLKNEIAR 175 + ++AR Sbjct: 184 IDEFAQDVAR 193 >gi|76819463|ref|YP_335506.1| hypothetical protein BURPS1710b_A0347 [Burkholderia pseudomallei 1710b] gi|254262408|ref|ZP_04953273.1| conserved hypothetical protein [Burkholderia pseudomallei 1710a] gi|76583936|gb|ABA53410.1| Protein of unknown function family [Burkholderia pseudomallei 1710b] gi|254213410|gb|EET02795.1| conserved hypothetical protein [Burkholderia pseudomallei 1710a] Length = 483 Score = 73.6 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 42/181 (23%), Positives = 69/181 (38%), Gaps = 25/181 (13%) Query: 1 MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 M P++ + ALF D N+ + F D + +L+ + ++ Y Sbjct: 1 MALPQDSVNMALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC------- 53 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLE 114 + +H F+++ R+ K+S D+ L VDA + ++ Sbjct: 54 -DWDRYKTFKAAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVD 105 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 VI SGD F+ LV+ L+ K+V V S SD L D F+ L E Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFIFYDDLAREQQ 161 Query: 175 R 175 R Sbjct: 162 R 162 >gi|237509073|ref|ZP_04521788.1| conserved hypothetical protein [Burkholderia pseudomallei MSHR346] gi|235001278|gb|EEP50702.1| conserved hypothetical protein [Burkholderia pseudomallei MSHR346] Length = 480 Score = 73.6 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 42/181 (23%), Positives = 69/181 (38%), Gaps = 25/181 (13%) Query: 1 MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 M P++ + ALF D N+ + F D + +L+ + ++ Y Sbjct: 1 MALPQDSVNMALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC------- 53 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLE 114 + +H F+++ R+ K+S D+ L VDA + ++ Sbjct: 54 -DWDRYKTFKAAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVD 105 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 VI SGD F+ LV+ L+ K+V V S SD L D F+ L E Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFIFYDDLAREQQ 161 Query: 175 R 175 R Sbjct: 162 R 162 >gi|126456340|ref|YP_001075832.1| hypothetical protein BURPS1106A_A1798 [Burkholderia pseudomallei 1106a] gi|242312308|ref|ZP_04811325.1| conserved hypothetical protein [Burkholderia pseudomallei 1106b] gi|126230108|gb|ABN93521.1| conserved hypothetical protein [Burkholderia pseudomallei 1106a] gi|242135547|gb|EES21950.1| conserved hypothetical protein [Burkholderia pseudomallei 1106b] Length = 483 Score = 73.6 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 42/181 (23%), Positives = 69/181 (38%), Gaps = 25/181 (13%) Query: 1 MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 M P++ + ALF D N+ + F D + +L+ + ++ Y Sbjct: 1 MALPQDSVNMALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC------- 53 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLE 114 + +H F+++ R+ K+S D+ L VDA + ++ Sbjct: 54 -DWDRYKTFKAAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVD 105 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 VI SGD F+ LV+ L+ K+V V S SD L D F+ L E Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFIFYDDLAREQQ 161 Query: 175 R 175 R Sbjct: 162 R 162 >gi|163857253|ref|YP_001631550.1| hypothetical protein Bpet2940 [Bordetella petrii DSM 12804] gi|163260981|emb|CAP43283.1| conserved hypothetical protein [Bordetella petrii] Length = 385 Score = 73.2 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 40/177 (22%), Positives = 65/177 (36%), Gaps = 25/177 (14%) Query: 9 ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 ALF D N+ + + D + +L+ + ++ Y + Sbjct: 54 ALFCDFENVALGVRDANYQKFDIKPVLERLLLKGSIVVKKAYC--------DWERYREFK 105 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124 +H F+++ R+ K+S D+ L VDA + ++ VI SGD Sbjct: 106 ATMHEANFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKLHVDTFVIISGDSD 158 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 F+ LV+ L+ K+V V S SD L D F+ L R E K Sbjct: 159 FSPLVSKLRENAKQVIGVGVKRS----TSDLLIANCDEFIFYDDL--VRERPRAEPK 209 >gi|53722351|ref|YP_111336.1| hypothetical protein BPSS1326 [Burkholderia pseudomallei K96243] gi|52212765|emb|CAH38797.1| conserved hypothetical protein [Burkholderia pseudomallei K96243] Length = 483 Score = 73.2 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 42/181 (23%), Positives = 69/181 (38%), Gaps = 25/181 (13%) Query: 1 MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 M P++ + ALF D N+ + F D + +L+ + ++ Y Sbjct: 1 MALPQDSVNMALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC------- 53 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLE 114 + +H F+++ R+ K+S D+ L VDA + ++ Sbjct: 54 -DWDRYKTFKAAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVD 105 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 VI SGD F+ LV+ L+ K+V V S SD L D F+ L E Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFIFYDDLAREQQ 161 Query: 175 R 175 R Sbjct: 162 R 162 >gi|254183703|ref|ZP_04890295.1| conserved hypothetical protein [Burkholderia pseudomallei 1655] gi|184214236|gb|EDU11279.1| conserved hypothetical protein [Burkholderia pseudomallei 1655] Length = 474 Score = 73.2 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 40/171 (23%), Positives = 64/171 (37%), Gaps = 23/171 (13%) Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 ALF D N+ + F D + +L+ + ++ Y + Sbjct: 2 ALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC--------DWDRYKTFK 53 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124 +H F+++ R+ K+S D+ L VDA + ++ VI SGD Sbjct: 54 AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGDSD 106 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 F+ LV+ L+ K+V V S SD L D F+ L E R Sbjct: 107 FSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFIFYDDLAREQQR 153 >gi|167723901|ref|ZP_02407137.1| hypothetical protein BpseD_33095 [Burkholderia pseudomallei DM98] Length = 474 Score = 73.2 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 40/171 (23%), Positives = 64/171 (37%), Gaps = 23/171 (13%) Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 ALF D N+ + F D + +L+ + ++ Y + Sbjct: 2 ALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC--------DWDRYKTFK 53 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124 +H F+++ R+ K+S D+ L VDA + ++ VI SGD Sbjct: 54 AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGDSD 106 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 F+ LV+ L+ K+V V S SD L D F+ L E R Sbjct: 107 FSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFIFYDDLAREQQR 153 >gi|126442572|ref|YP_001062878.1| hypothetical protein BURPS668_A1883 [Burkholderia pseudomallei 668] gi|126222063|gb|ABN85568.1| conserved hypothetical protein [Burkholderia pseudomallei 668] Length = 477 Score = 73.2 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 40/171 (23%), Positives = 64/171 (37%), Gaps = 23/171 (13%) Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 ALF D N+ + F D + +L+ + ++ Y + Sbjct: 2 ALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC--------DWDRYKTFK 53 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124 +H F+++ R+ K+S D+ L VDA + ++ VI SGD Sbjct: 54 AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGDSD 106 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 F+ LV+ L+ K+V V S SD L D F+ L E R Sbjct: 107 FSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFIFYDDLAREQQR 153 >gi|167742874|ref|ZP_02415648.1| hypothetical protein Bpse14_32667 [Burkholderia pseudomallei 14] gi|254191183|ref|ZP_04897688.1| conserved hypothetical protein [Burkholderia pseudomallei Pasteur 52237] gi|157938856|gb|EDO94526.1| conserved hypothetical protein [Burkholderia pseudomallei Pasteur 52237] Length = 474 Score = 73.2 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 40/171 (23%), Positives = 64/171 (37%), Gaps = 23/171 (13%) Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 ALF D N+ + F D + +L+ + ++ Y + Sbjct: 2 ALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC--------DWDRYKTFK 53 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124 +H F+++ R+ K+S D+ L VDA + ++ VI SGD Sbjct: 54 AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGDSD 106 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 F+ LV+ L+ K+V V S SD L D F+ L E R Sbjct: 107 FSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFIFYDDLAREQQR 153 >gi|302325583|gb|ADL24784.1| conserved domain protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 253 Score = 72.9 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 37/159 (23%), Positives = 69/159 (43%), Gaps = 24/159 (15%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 A+F+D NL + G D L+K+ +S+ V+ Y + L PL Sbjct: 23 TAVFVDAENLTFWAYNNGVH-D---LMKSLQSQGPVVIRKAY------GKWTSPQLSPLQ 72 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCF 125 + NGF+++ + K+S D+++ VDA E + L+ +V+ +GD F Sbjct: 73 QEFNINGFELI--------QTYHPITGKNSADIKMVVDAMEAATNPCLQTIVLATGDSDF 124 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 + L L+ KKV V + S+ ++ +++ Sbjct: 125 SPLFRKLREMGKKVIGVGPLSKL----SECVQSSCTHYI 159 >gi|261414502|ref|YP_003248185.1| protein of unknown function DUF88 [Fibrobacter succinogenes subsp. succinogenes S85] gi|261370958|gb|ACX73703.1| protein of unknown function DUF88 [Fibrobacter succinogenes subsp. succinogenes S85] Length = 235 Score = 72.9 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 37/159 (23%), Positives = 69/159 (43%), Gaps = 24/159 (15%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 A+F+D NL + G D L+K+ +S+ V+ Y + L PL Sbjct: 5 TAVFVDAENLTFWAYNNGVH-D---LMKSLQSQGPVVIRKAY------GKWTSPQLSPLQ 54 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCF 125 + NGF+++ + K+S D+++ VDA E + L+ +V+ +GD F Sbjct: 55 QEFNINGFELI--------QTYHPITGKNSADIKMVVDAMEAATNPCLQTIVLATGDSDF 106 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 + L L+ KKV V + S+ ++ +++ Sbjct: 107 SPLFRKLREMGKKVIGVGPLSKL----SECVQSSCTHYI 141 >gi|167915186|ref|ZP_02502277.1| hypothetical protein Bpse112_32216 [Burkholderia pseudomallei 112] Length = 474 Score = 72.9 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 40/171 (23%), Positives = 64/171 (37%), Gaps = 23/171 (13%) Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 ALF D N+ + F D + +L+ + ++ Y + Sbjct: 2 ALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC--------DWDRYKTFK 53 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124 +H F+++ R+ K+S D+ L VDA + ++ VI SGD Sbjct: 54 AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGDSD 106 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 F+ LV+ L+ K+V V S SD L D F+ L E R Sbjct: 107 FSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFIFYDDLAREQQR 153 >gi|167849880|ref|ZP_02475388.1| hypothetical protein BpseB_31835 [Burkholderia pseudomallei B7210] Length = 474 Score = 72.9 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 40/171 (23%), Positives = 64/171 (37%), Gaps = 23/171 (13%) Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 ALF D N+ + F D + +L+ + ++ Y + Sbjct: 2 ALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC--------DWDRYKTFK 53 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124 +H F+++ R+ K+S D+ L VDA + ++ VI SGD Sbjct: 54 AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGDSD 106 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 F+ LV+ L+ K+V V S SD L D F+ L E R Sbjct: 107 FSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFIFYDDLAREQQR 153 >gi|217418449|ref|ZP_03449956.1| conserved hypothetical protein [Burkholderia pseudomallei 576] gi|217397753|gb|EEC37768.1| conserved hypothetical protein [Burkholderia pseudomallei 576] Length = 500 Score = 72.9 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 42/181 (23%), Positives = 69/181 (38%), Gaps = 25/181 (13%) Query: 1 MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 M P++ + ALF D N+ + F D + +L+ + ++ Y Sbjct: 18 MALPQDSVNMALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC------- 70 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLE 114 + +H F+++ R+ K+S D+ L VDA + ++ Sbjct: 71 -DWDRYKTFKAAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVD 122 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 VI SGD F+ LV+ L+ K+V V S SD L D F+ L E Sbjct: 123 TFVIISGDSDFSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFIFYDDLAREQQ 178 Query: 175 R 175 R Sbjct: 179 R 179 >gi|167923021|ref|ZP_02510112.1| hypothetical protein BpseBC_30982 [Burkholderia pseudomallei BCC215] Length = 477 Score = 72.9 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 40/171 (23%), Positives = 64/171 (37%), Gaps = 23/171 (13%) Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 ALF D N+ + F D + +L+ + ++ Y + Sbjct: 2 ALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC--------DWDRYKTFK 53 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124 +H F+++ R+ K+S D+ L VDA + ++ VI SGD Sbjct: 54 AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGDSD 106 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 F+ LV+ L+ K+V V S SD L D F+ L E R Sbjct: 107 FSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFIFYDDLAREQQR 153 >gi|238024602|ref|YP_002908834.1| hypothetical protein bglu_2g12170 [Burkholderia glumae BGR1] gi|237879267|gb|ACR31599.1| Hypothetical protein bglu_2g12170 [Burkholderia glumae BGR1] Length = 538 Score = 72.9 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 42/181 (23%), Positives = 69/181 (38%), Gaps = 25/181 (13%) Query: 1 MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 M P++ + ALF D N+ + F D + +L+ + ++ Y Sbjct: 1 MALPQDSVNMALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC------- 53 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLE 114 + +H F+++ R+ K+S D+ L VDA + ++ Sbjct: 54 -DWDRYKTFKGAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVD 105 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 VI SGD F+ LV+ L+ K+V V S SD L D F+ L E Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFIFYDDLAREQQ 161 Query: 175 R 175 R Sbjct: 162 R 162 >gi|167898481|ref|ZP_02485882.1| hypothetical protein Bpse7_32411 [Burkholderia pseudomallei 7894] Length = 456 Score = 72.9 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 40/171 (23%), Positives = 64/171 (37%), Gaps = 23/171 (13%) Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 ALF D N+ + F D + +L+ + ++ Y + Sbjct: 2 ALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC--------DWDRYKTFK 53 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124 +H F+++ R+ K+S D+ L VDA + ++ VI SGD Sbjct: 54 AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGDSD 106 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 F+ LV+ L+ K+V V S SD L D F+ L E R Sbjct: 107 FSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFIFYDDLAREQQR 153 >gi|167820046|ref|ZP_02451726.1| hypothetical protein Bpse9_33267 [Burkholderia pseudomallei 91] Length = 460 Score = 72.9 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 40/171 (23%), Positives = 64/171 (37%), Gaps = 23/171 (13%) Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 ALF D N+ + F D + +L+ + ++ Y + Sbjct: 2 ALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC--------DWDRYKTFK 53 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124 +H F+++ R+ K+S D+ L VDA + ++ VI SGD Sbjct: 54 AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGDSD 106 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 F+ LV+ L+ K+V V S SD L D F+ L E R Sbjct: 107 FSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFIFYDDLAREQQR 153 >gi|167906832|ref|ZP_02494037.1| hypothetical protein BpseN_31680 [Burkholderia pseudomallei NCTC 13177] Length = 470 Score = 72.9 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 40/171 (23%), Positives = 64/171 (37%), Gaps = 23/171 (13%) Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 ALF D N+ + F D + +L+ + ++ Y + Sbjct: 2 ALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC--------DWDRYKTFK 53 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124 +H F+++ R+ K+S D+ L VDA + ++ VI SGD Sbjct: 54 AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGDSD 106 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 F+ LV+ L+ K+V V S SD L D F+ L E R Sbjct: 107 FSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFIFYDDLAREQQR 153 >gi|167828427|ref|ZP_02459898.1| hypothetical protein Bpseu9_32389 [Burkholderia pseudomallei 9] Length = 469 Score = 72.9 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 40/171 (23%), Positives = 64/171 (37%), Gaps = 23/171 (13%) Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 ALF D N+ + F D + +L+ + ++ Y + Sbjct: 2 ALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC--------DWDRYKTFK 53 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124 +H F+++ R+ K+S D+ L VDA + ++ VI SGD Sbjct: 54 AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGDSD 106 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 F+ LV+ L+ K+V V S SD L D F+ L E R Sbjct: 107 FSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFIFYDDLAREQQR 153 >gi|167566002|ref|ZP_02358918.1| hypothetical protein BoklE_25814 [Burkholderia oklahomensis EO147] Length = 524 Score = 72.9 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 40/171 (23%), Positives = 64/171 (37%), Gaps = 23/171 (13%) Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 ALF D N+ + F D + +L+ + ++ Y + Sbjct: 2 ALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC--------DWDRYKTFK 53 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124 +H F+++ R+ K+S D+ L VDA + ++ VI SGD Sbjct: 54 AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGDSD 106 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 F+ LV+ L+ K+V V S SD L D F+ L E R Sbjct: 107 FSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFIFYDDLAREQQR 153 >gi|254174034|ref|ZP_04880697.1| protein of unknown function [Burkholderia mallei ATCC 10399] gi|254356680|ref|ZP_04972955.1| protein of unknown function [Burkholderia mallei 2002721280] gi|148025707|gb|EDK83830.1| protein of unknown function [Burkholderia mallei 2002721280] gi|160695081|gb|EDP85051.1| protein of unknown function [Burkholderia mallei ATCC 10399] Length = 477 Score = 72.9 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 40/171 (23%), Positives = 64/171 (37%), Gaps = 23/171 (13%) Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 ALF D N+ + F D + +L+ + ++ Y + Sbjct: 2 ALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC--------DWDRYKTFK 53 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124 +H F+++ R+ K+S D+ L VDA + ++ VI SGD Sbjct: 54 AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGDSD 106 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 F+ LV+ L+ K+V V S SD L D F+ L E R Sbjct: 107 FSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFIFYDDLAREQQR 153 >gi|220934364|ref|YP_002513263.1| protein of unknown function DUF88 [Thioalkalivibrio sp. HL-EbGR7] gi|219995674|gb|ACL72276.1| protein of unknown function DUF88 [Thioalkalivibrio sp. HL-EbGR7] Length = 275 Score = 72.9 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 40/178 (22%), Positives = 66/178 (37%), Gaps = 23/178 (12%) Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 ALF D N+ + + D K+L+ + ++ Y + Sbjct: 11 ALFCDFENIALGVREAKYPKFDIGKVLERLLLKGNIVVRKAYC--------DWDRYKEFK 62 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124 +H F+++ R+ K+S D+ + VDA + ++ V+ SGD Sbjct: 63 APMHEAAFELIEIPHV-------RQSGKNSADIRMVVDALDLCYTKGHVDAFVVISGDSD 115 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182 F+ LVA L+ K V V S SD L D F+ L E A + +K Sbjct: 116 FSPLVAKLRENNKLVIGVGVKKS----TSDLLTAACDEFIYYDDLVREAAHKKRKPRK 169 >gi|256824346|ref|YP_003148306.1| hypothetical protein Ksed_04690 [Kytococcus sedentarius DSM 20547] gi|256687739|gb|ACV05541.1| uncharacterized conserved protein [Kytococcus sedentarius DSM 20547] Length = 412 Score = 72.9 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 41/182 (22%), Positives = 64/182 (35%), Gaps = 23/182 (12%) Query: 6 EKIALFIDGANLYASSKAL--GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 ++IALF+D NL ++ G D + + A R V+ Y E + Sbjct: 4 DRIALFVDYENLALGARDHLGGMTFDLKPIADALAERGRVVVRRAYADWSYFDEDRRMLT 63 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFS 120 + E + G R + D+++ VDA E + + I + Sbjct: 64 RSHV-------------ELIEMPQRMGASRKNA-ADIKMVVDAIEMAFERGYITTFAICT 109 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GD FT LV L+ K V V S +M L D F+ L P ++ Sbjct: 110 GDSDFTPLVHKLRELNKNVIGVGVRNSTSAM----LPPSCDEFLFYDTLDGVDPHTPAKE 165 Query: 181 KK 182 K Sbjct: 166 TK 167 >gi|323527162|ref|YP_004229315.1| hypothetical protein BC1001_2841 [Burkholderia sp. CCGE1001] gi|323384164|gb|ADX56255.1| hypothetical protein BC1001_2841 [Burkholderia sp. CCGE1001] Length = 534 Score = 72.5 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 42/181 (23%), Positives = 66/181 (36%), Gaps = 25/181 (13%) Query: 1 MFDPREKI--ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 M E + ALF D N+ + +D D + +L+ + ++ Y Sbjct: 1 MASSNETVSMALFCDFENVALGVRDAKYDKFDIKLVLERLLLKGSIVVKKAYC------- 53 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLE 114 + +H F+++ R+ K+S D+ L VDA + + Sbjct: 54 -DWDRYKSFKGAMHEANFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVN 105 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 VI SGD F+ LV+ L+ K+V V S SD L D F L E Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKQVIGVGVQQS----TSDLLIANCDEFFFYDDLVRESQ 161 Query: 175 R 175 R Sbjct: 162 R 162 >gi|15668658|ref|NP_247457.1| hypothetical protein MJ_0482 [Methanocaldococcus jannaschii DSM 2661] gi|2496000|sp|Q57905|Y482_METJA RecName: Full=Uncharacterized protein MJ0482 gi|1591185|gb|AAB98473.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM 2661] Length = 240 Score = 72.5 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 58/164 (35%), Gaps = 32/164 (19%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 +IAL IDG N+ F+ID K+ + ++ Y L Sbjct: 71 RIALLIDGPNM----LRKEFNIDLDKIREVLSEFGDIVIGRVYLNQYASD--------KL 118 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGC 124 ++ + GF+ +DVE+AVDA E ++ + + D Sbjct: 119 IEAVINQGFEPKI--------------SAGDVDVEMAVDATELVFNPNIDTIAYVTRDAD 164 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F + + + KKV ++ S L+ ADY + + Sbjct: 165 FLPAIRKAKERGKKVIVIGAEPGF----STALQNIADYVIKIGE 204 >gi|170693531|ref|ZP_02884690.1| protein of unknown function DUF88 [Burkholderia graminis C4D1M] gi|170141686|gb|EDT09855.1| protein of unknown function DUF88 [Burkholderia graminis C4D1M] Length = 534 Score = 72.5 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 42/182 (23%), Positives = 66/182 (36%), Gaps = 25/182 (13%) Query: 1 MFDPREKI--ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 M E + ALF D N+ + +D D + +L+ + ++ Y Sbjct: 1 MASSNETVSMALFCDFENVALGVRDAKYDKFDIKLVLERLLLKGSIVVKKAYC------- 53 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLE 114 + +H F+++ R+ K+S D+ L VDA + + Sbjct: 54 -DWDRYKSFKGAMHEANFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVN 105 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 VI SGD F+ LV+ L+ K+V V S SD L D F L E Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKQVIGVGVQQS----TSDLLIANCDEFFFYDDLVRESQ 161 Query: 175 RD 176 R Sbjct: 162 RT 163 >gi|307730797|ref|YP_003908021.1| hypothetical protein BC1003_2777 [Burkholderia sp. CCGE1003] gi|307585332|gb|ADN58730.1| protein of unknown function DUF88 [Burkholderia sp. CCGE1003] Length = 562 Score = 72.1 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 42/181 (23%), Positives = 66/181 (36%), Gaps = 25/181 (13%) Query: 1 MFDPREKI--ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 M E + ALF D N+ + +D D + +L+ + ++ Y Sbjct: 1 MASSNETVSMALFCDFENVALGVRDAKYDKFDIKLVLERLLLKGSIVVKKAYC------- 53 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLE 114 + +H F+++ R+ K+S D+ L VDA + + Sbjct: 54 -DWDRYKSFKGAMHEANFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVN 105 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 VI SGD F+ LV+ L+ K+V V S SD L D F L E Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKQVIGVGVQQS----TSDLLIANCDEFFFYDDLVRESQ 161 Query: 175 R 175 R Sbjct: 162 R 162 >gi|167573079|ref|ZP_02365953.1| hypothetical protein BoklC_24798 [Burkholderia oklahomensis C6786] Length = 468 Score = 72.1 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 40/171 (23%), Positives = 64/171 (37%), Gaps = 23/171 (13%) Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 ALF D N+ + F D + +L+ + ++ Y + Sbjct: 2 ALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC--------DWDRYKTFK 53 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124 +H F+++ R+ K+S D+ L VDA + ++ VI SGD Sbjct: 54 AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGDSD 106 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 F+ LV+ L+ K+V V S SD L D F+ L E R Sbjct: 107 FSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFIFYDDLAREQQR 153 >gi|221201416|ref|ZP_03574455.1| protein of unknown function DUF88 [Burkholderia multivorans CGD2M] gi|221208028|ref|ZP_03581034.1| protein of unknown function DUF88 [Burkholderia multivorans CGD2] gi|221172213|gb|EEE04654.1| protein of unknown function DUF88 [Burkholderia multivorans CGD2] gi|221178684|gb|EEE11092.1| protein of unknown function DUF88 [Burkholderia multivorans CGD2M] Length = 479 Score = 72.1 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 39/171 (22%), Positives = 64/171 (37%), Gaps = 23/171 (13%) Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 A+F D N+ + + D + +L+ + ++ Y + Sbjct: 2 AVFCDFENVALGVRDAKYEKFDIKPVLEKLLLKGSIVVKKAYC--------DWDRYKGFK 53 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124 +H F+++ R+ K+S D+ L VDA + ++ VI SGD Sbjct: 54 AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVDTFVIVSGDSD 106 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 F+ LV+ L+ KKV V S SD L D F+ L E R Sbjct: 107 FSPLVSKLRENAKKVIGVGVKKS----TSDLLVANCDEFIFYDDLVREQQR 153 >gi|221214025|ref|ZP_03586998.1| protein of unknown function DUF88 [Burkholderia multivorans CGD1] gi|221166202|gb|EED98675.1| protein of unknown function DUF88 [Burkholderia multivorans CGD1] Length = 479 Score = 72.1 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 39/171 (22%), Positives = 64/171 (37%), Gaps = 23/171 (13%) Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 A+F D N+ + + D + +L+ + ++ Y + Sbjct: 2 AVFCDFENVALGVRDAKYEKFDIKPVLEKLLLKGSIVVKKAYC--------DWDRYKGFK 53 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124 +H F+++ R+ K+S D+ L VDA + ++ VI SGD Sbjct: 54 AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVDTFVIVSGDSD 106 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 F+ LV+ L+ KKV V S SD L D F+ L E R Sbjct: 107 FSPLVSKLRENAKKVIGVGVKKS----TSDLLVANCDEFIFYDDLVREQQR 153 >gi|171317829|ref|ZP_02907008.1| protein of unknown function DUF88 [Burkholderia ambifaria MEX-5] gi|171096994|gb|EDT41862.1| protein of unknown function DUF88 [Burkholderia ambifaria MEX-5] Length = 643 Score = 72.1 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 39/178 (21%), Positives = 67/178 (37%), Gaps = 23/178 (12%) Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 A+F D N+ + + D + +L+ + ++ Y + Sbjct: 11 AVFCDFENVALGVRDAKYEKFDIQPVLERLLLKGSIVVKKAYC--------DWERYKGFK 62 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124 +H F+++ R+ K+S D+ L VDA + ++ VI SGD Sbjct: 63 ASMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVDTFVIISGDSD 115 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182 F+ LV+ L+ KKV V S SD L D F+ L E R + ++ Sbjct: 116 FSPLVSKLRENAKKVIGVGVKKS----TSDLLVANCDEFIFYDDLVREQQRAQAKREQ 169 >gi|256810620|ref|YP_003127989.1| protein of unknown function DUF88 [Methanocaldococcus fervens AG86] gi|256793820|gb|ACV24489.1| protein of unknown function DUF88 [Methanocaldococcus fervens AG86] Length = 195 Score = 72.1 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 58/164 (35%), Gaps = 32/164 (19%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 +IAL IDG N+ F+ID K+ + ++ Y L Sbjct: 24 RIALLIDGPNM----LRKEFNIDLDKIREVLSEFGDIVIGRVYLNQYASD--------KL 71 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGC 124 ++ + GF+ +DVE+AVDA E ++ + + D Sbjct: 72 IEAVINQGFEPKI--------------SAGDVDVEMAVDATELVFNPNIDTIAYVTRDAD 117 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F + + + KKV ++ S L+ ADY + + Sbjct: 118 FLPAIRKAKERGKKVIVIGAEPGF----STALQNIADYVIKIGE 157 >gi|241766896|ref|ZP_04764705.1| protein of unknown function DUF88 [Acidovorax delafieldii 2AN] gi|241362653|gb|EER58487.1| protein of unknown function DUF88 [Acidovorax delafieldii 2AN] Length = 316 Score = 72.1 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 47/191 (24%), Positives = 69/191 (36%), Gaps = 33/191 (17%) Query: 1 MFDPREKI--ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 M P + I ALF D N+ + +D D + +L+ + ++ Y Sbjct: 1 MASPTDSISMALFCDFENVALGVRDAKYDKFDIKPVLERLLLKGSIVVKKAYC------- 53 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKV----AKEFTENCGRKRVKSSMDVELAVDAFEQ---S 110 DW Y GF+ E R+ K+S D+ L VDA + Sbjct: 54 ----------DWERYKGFKATMHEANFELIEIPHV--RQSGKNSADIRLVVDALDLCYTK 101 Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170 + VI SGD F+ LV+ L+ K+V V S SD L D F+ L Sbjct: 102 SHVNTFVIISGDSDFSPLVSKLRENAKQVIGVGVKQS----TSDLLIANCDEFIFYDDLV 157 Query: 171 NEIARDPDEDK 181 E R + Sbjct: 158 RESQRAQARRQ 168 >gi|303232840|ref|ZP_07319524.1| conserved hypothetical protein [Atopobium vaginae PB189-T1-4] gi|302481030|gb|EFL44106.1| conserved hypothetical protein [Atopobium vaginae PB189-T1-4] Length = 260 Score = 71.7 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 62/183 (33%), Gaps = 31/183 (16%) Query: 4 PREKIALFIDGANLYA---------SSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVG 54 P+ +A+FID N +S+ D + + + + Y Sbjct: 5 PQRSLAVFIDYENFAYGAAGAAHKRTSRTHRKTPDMKSVFGRLVDKGRITVKRAYC---- 60 Query: 55 DPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SE 111 + + LH G + E + K+S D+ LAVDA E E Sbjct: 61 ----DWQRFKQDITPLHELGIE-----LIEIPDRSSTG--KNSADIRLAVDATEMCLTKE 109 Query: 112 GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 ++ I SGD F+ LVA L+ K V + + S L D F+ + Sbjct: 110 HIDTFAILSGDSDFSPLVAKLKEFGKTV----IGIGAEPITSSLLVEVCDEFIFYEDIVA 165 Query: 172 EIA 174 + Sbjct: 166 QAG 168 >gi|76803018|ref|YP_331113.1| hypothetical protein NP4776A [Natronomonas pharaonis DSM 2160] gi|76558883|emb|CAI50479.2| conserved hypothetical protein [Natronomonas pharaonis DSM 2160] Length = 145 Score = 71.7 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 35/163 (21%), Positives = 61/163 (37%), Gaps = 31/163 (19%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 ++ +F+DG N++ + FD+D +L + A Y + L Sbjct: 12 RVGIFVDGPNVFRA----EFDVDLDELRALAGDEGTIAVARVYV--------DENASGGL 59 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGC 124 + GF+VV +DV+LAVDA E + E ++ +V+ S D Sbjct: 60 IQAAEARGFEVVT--------------TSGDVDVKLAVDAVEAAVDEQVDTVVVVSRDTD 105 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F ++ ++ V+ SD LR A + L Sbjct: 106 FKPVLETAAKRGLHTVAVAPGTHGR---SDALRNAAHDEITLE 145 >gi|225165594|ref|ZP_03727408.1| protein of unknown function DUF88 [Opitutaceae bacterium TAV2] gi|224800165|gb|EEG18581.1| protein of unknown function DUF88 [Opitutaceae bacterium TAV2] Length = 265 Score = 71.7 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 36/166 (21%), Positives = 62/166 (37%), Gaps = 23/166 (13%) Query: 8 IALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 +A+F+D N+ ++ F D K+ + + ++ Y F Sbjct: 10 LAVFLDLENIARGAQDARFPQFDIGKVFERLLIKGNIVVKKAYC--------DFERYKDF 61 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDG 123 LH F+++ R+ K+S D+ + VDA + + ++ I SGD Sbjct: 62 KRPLHEAAFELIEIPHV-------RQSGKNSADIRMVVDALDLCYTNDHVDAFAIISGDS 114 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 F+ LV+ L+ K V V S SD D F+ L Sbjct: 115 DFSPLVSKLRENGKTVIGVGVKNS----TSDLFIANCDEFIYYDDL 156 >gi|115351126|ref|YP_772965.1| hypothetical protein Bamb_1072 [Burkholderia ambifaria AMMD] gi|115281114|gb|ABI86631.1| protein of unknown function DUF88 [Burkholderia ambifaria AMMD] Length = 507 Score = 71.7 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 39/178 (21%), Positives = 67/178 (37%), Gaps = 23/178 (12%) Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 A+F D N+ + + D + +L+ + ++ Y + Sbjct: 11 AVFCDFENVALGVRDAKYEKFDIQPVLERLLLKGSIVVKKAYC--------DWERYKGFK 62 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124 +H F+++ R+ K+S D+ L VDA + ++ VI SGD Sbjct: 63 ASMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVDTFVIISGDSD 115 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182 F+ LV+ L+ KKV V S SD L D F+ L E R + ++ Sbjct: 116 FSPLVSKLRENAKKVIGVGVKKS----TSDLLVANCDEFIFYDDLVREQQRAQAKREQ 169 >gi|289193218|ref|YP_003459159.1| protein of unknown function DUF88 [Methanocaldococcus sp. FS406-22] gi|288939668|gb|ADC70423.1| protein of unknown function DUF88 [Methanocaldococcus sp. FS406-22] Length = 202 Score = 71.7 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 58/164 (35%), Gaps = 32/164 (19%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 +IAL IDG N+ F+ID K+ + ++ Y L Sbjct: 24 RIALLIDGPNM----LRKEFNIDLDKIREVLSEFGDIVIGRVYLNQYASD--------KL 71 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGC 124 ++ + GF+ +DVE+AVDA E ++ + + D Sbjct: 72 IEAVINQGFEPKI--------------SAGDVDVEMAVDATELVFNPNIDTIAYVTRDAD 117 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F + + + KKV ++ S L+ ADY + + Sbjct: 118 FLPAIRKAKERGKKVIVIGAEPGF----STALQNIADYVIKIGE 157 >gi|161525283|ref|YP_001580295.1| hypothetical protein Bmul_2113 [Burkholderia multivorans ATCC 17616] gi|189349979|ref|YP_001945607.1| hypothetical protein BMULJ_01131 [Burkholderia multivorans ATCC 17616] gi|160342712|gb|ABX15798.1| protein of unknown function DUF88 [Burkholderia multivorans ATCC 17616] gi|189334001|dbj|BAG43071.1| conserved hypothetical protein [Burkholderia multivorans ATCC 17616] Length = 508 Score = 71.7 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 39/171 (22%), Positives = 65/171 (38%), Gaps = 23/171 (13%) Query: 9 ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 A+F D N+ + ++ D + +L+ + ++ Y + Sbjct: 11 AVFCDFENVALGVRDAKYEKFDIKPVLEKLLLKGSIVVKKAYC--------DWDRYKGFK 62 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124 +H F+++ R+ K+S D+ L VDA + ++ VI SGD Sbjct: 63 AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVDTFVIVSGDSD 115 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 F+ LV+ L+ KKV V S SD L D F+ L E R Sbjct: 116 FSPLVSKLRENAKKVIGVGVKKS----TSDLLVANCDEFIFYDDLVREQQR 162 >gi|256829512|ref|YP_003158240.1| hypothetical protein Dbac_1733 [Desulfomicrobium baculatum DSM 4028] gi|256578688|gb|ACU89824.1| protein of unknown function DUF88 [Desulfomicrobium baculatum DSM 4028] Length = 209 Score = 71.7 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 38/192 (19%), Positives = 68/192 (35%), Gaps = 34/192 (17%) Query: 11 FIDGANLY---ASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 ID L+ S ++ G++ Y +L ++ RAYY + P H L Sbjct: 9 LIDAGYLFNARHSVRS-GYEFSYLRLRNYLEQDGLIWRAYYLNSTPNPPSDGQDNFHRWL 67 Query: 68 DWLHYNGFQVVAKVA--------KEFTENCGRK------------------RVKSSMDVE 101 G +++ K K + E CG+K ++ +DV Sbjct: 68 RSGPPFGPKIITKFYTLKQQRADKAYCEECGQKVSLRCQNQHGDFTHRVFNEIQKGVDVA 127 Query: 102 LAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161 +A + E L++ SGD V L + K + +V S +L+ +AD Sbjct: 128 IATLSLIHQRNYETLMLSSGDSDLLDAVEHLSEQGKSIELVVFRDG----VSSELQCRAD 183 Query: 162 YFMDLAYLKNEI 173 + +E+ Sbjct: 184 RIYWINDFASEV 195 >gi|295677487|ref|YP_003606011.1| protein of unknown function DUF88 [Burkholderia sp. CCGE1002] gi|295437330|gb|ADG16500.1| protein of unknown function DUF88 [Burkholderia sp. CCGE1002] Length = 515 Score = 71.7 bits (175), Expect = 5e-11, Method: Composition-based stats. Identities = 42/181 (23%), Positives = 66/181 (36%), Gaps = 25/181 (13%) Query: 1 MFDPREKI--ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 M E + ALF D N+ + +D D + +L+ + ++ Y Sbjct: 1 MASSNENVSMALFCDFENVALGVRDAKYDKFDIKLVLERLLLKGSIVVKKAYC------- 53 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLE 114 + +H F+++ R+ K+S D+ L VDA + + Sbjct: 54 -DWDRYKSFKGAMHEANFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVN 105 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 VI SGD F+ LV+ L+ K+V V S SD L D F L E Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKQVIGVGVQQS----TSDLLIANCDEFFFYDDLVRESQ 161 Query: 175 R 175 R Sbjct: 162 R 162 >gi|83717296|ref|YP_439296.1| hypothetical protein BTH_II1099 [Burkholderia thailandensis E264] gi|83651121|gb|ABC35185.1| Protein of unknown function family [Burkholderia thailandensis E264] Length = 472 Score = 71.7 bits (175), Expect = 5e-11, Method: Composition-based stats. Identities = 42/181 (23%), Positives = 70/181 (38%), Gaps = 25/181 (13%) Query: 1 MFDPREKI--ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 M P++ + ALF D N+ + F+ D + +L+ + ++ Y Sbjct: 1 MALPQDSVNMALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC------- 53 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLE 114 + +H F+++ R+ K+S D+ L VDA + ++ Sbjct: 54 -DWDRYKTFKAAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVD 105 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 VI SGD F+ LV+ L+ K+V V S SD L D F+ L E Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFIFYDDLAREQQ 161 Query: 175 R 175 R Sbjct: 162 R 162 >gi|182414934|ref|YP_001820000.1| hypothetical protein Oter_3120 [Opitutus terrae PB90-1] gi|177842148|gb|ACB76400.1| protein of unknown function DUF88 [Opitutus terrae PB90-1] Length = 264 Score = 71.3 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 26/179 (14%) Query: 8 IALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 +A+F+D N+ ++ F +D K+L+ + ++ Y F L Sbjct: 10 LAVFLDLENIAHGARDAHFPPLDISKVLERLLLKGNIVVKKAYC--------DFDRFKEL 61 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDG 123 LH F+++ R+ K+S D+ + VDA + + ++ I SGD Sbjct: 62 KRDLHEAAFELIEIPHV-------RQSGKNSADIRMVVDALDLCYTNQHVDAFAIISGDS 114 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182 F+ LV+ L+ K V L + SD D F+ L + P + + Sbjct: 115 DFSPLVSKLRENAKTV----IGLGVKNSTSDLFIANCDEFIYYDDL---VRAQPAKPAR 166 >gi|307305137|ref|ZP_07584886.1| protein of unknown function DUF88 [Sinorhizobium meliloti BL225C] gi|306902477|gb|EFN33072.1| protein of unknown function DUF88 [Sinorhizobium meliloti BL225C] Length = 92 Score = 71.3 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 42/86 (48%), Positives = 51/86 (59%), Gaps = 2/86 (2%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFD REKIAL +DG NLYA+SKALGFDIDY KLL+AFR RA ++R T P Sbjct: 1 MFDHREKIALLMDGPNLYAASKALGFDIDYCKLLEAFRKRAYLLRGQLLRTFGRRPGNAD 60 Query: 61 SPLHPLLDWLHYN--GFQVVAKVAKE 84 PL L L + G Q ++ + Sbjct: 61 DPLAHRLARLQWIPDGHQADQRIHRH 86 >gi|187925165|ref|YP_001896807.1| hypothetical protein Bphyt_3191 [Burkholderia phytofirmans PsJN] gi|187716359|gb|ACD17583.1| protein of unknown function DUF88 [Burkholderia phytofirmans PsJN] Length = 478 Score = 71.3 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 42/182 (23%), Positives = 66/182 (36%), Gaps = 25/182 (13%) Query: 1 MFDPREKI--ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 M E + ALF D N+ + +D D + +L+ + ++ Y Sbjct: 1 MASSNETVSMALFCDFENVALGVRDAKYDKFDIKLVLERLLLKGSIVVKKAYC------- 53 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLE 114 + +H F+++ R+ K+S D+ L VDA + + Sbjct: 54 -DWDRYKSFKGAMHEANFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVN 105 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 VI SGD F+ LV+ L+ K+V V S SD L D F L E Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKQVIGVGVQQS----TSDLLIANCDEFFFYDDLVRESQ 161 Query: 175 RD 176 R Sbjct: 162 RT 163 >gi|167577696|ref|ZP_02370570.1| hypothetical protein BthaT_06146 [Burkholderia thailandensis TXDOH] Length = 463 Score = 71.3 bits (174), Expect = 6e-11, Method: Composition-based stats. Identities = 40/171 (23%), Positives = 65/171 (38%), Gaps = 23/171 (13%) Query: 9 ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 ALF D N+ + F+ D + +L+ + ++ Y + Sbjct: 2 ALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC--------DWDRYKTFK 53 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124 +H F+++ R+ K+S D+ L VDA + ++ VI SGD Sbjct: 54 AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGDSD 106 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 F+ LV+ L+ K+V V S SD L D F+ L E R Sbjct: 107 FSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFIFYDDLAREQQR 153 >gi|329906041|ref|ZP_08274342.1| hypothetical protein IMCC9480_2751 [Oxalobacteraceae bacterium IMCC9480] gi|327547373|gb|EGF32203.1| hypothetical protein IMCC9480_2751 [Oxalobacteraceae bacterium IMCC9480] Length = 284 Score = 70.9 bits (173), Expect = 7e-11, Method: Composition-based stats. Identities = 37/169 (21%), Positives = 63/169 (37%), Gaps = 23/169 (13%) Query: 9 ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 ALF D N+ + + D RK+L+ + ++ Y + Sbjct: 11 ALFCDFENVALGVRDAKYAAFDIRKVLERLLLKGNIVVKKAYC--------DWDRYKDFK 62 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124 +H F+++ R+ K+S D+ + VDA + ++ VI SGD Sbjct: 63 AAMHEAAFELIEIPHV-------RQSGKNSADIRMVVDALDLCYTKAHVDTFVILSGDSD 115 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 F+ LV+ L+ K+V V SD L D F+ L + Sbjct: 116 FSPLVSKLRENNKRVIGV----GVKDSTSDLLSANCDEFIFYDDLVQVV 160 >gi|167615822|ref|ZP_02384457.1| hypothetical protein BthaB_05981 [Burkholderia thailandensis Bt4] gi|257142413|ref|ZP_05590675.1| hypothetical protein BthaA_24818 [Burkholderia thailandensis E264] Length = 463 Score = 70.9 bits (173), Expect = 7e-11, Method: Composition-based stats. Identities = 40/171 (23%), Positives = 65/171 (38%), Gaps = 23/171 (13%) Query: 9 ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 ALF D N+ + F+ D + +L+ + ++ Y + Sbjct: 2 ALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC--------DWDRYKTFK 53 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124 +H F+++ R+ K+S D+ L VDA + ++ VI SGD Sbjct: 54 AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGDSD 106 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 F+ LV+ L+ K+V V S SD L D F+ L E R Sbjct: 107 FSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFIFYDDLAREQQR 153 >gi|261402330|ref|YP_003246554.1| protein of unknown function DUF88 [Methanocaldococcus vulcanius M7] gi|261369323|gb|ACX72072.1| protein of unknown function DUF88 [Methanocaldococcus vulcanius M7] Length = 216 Score = 70.9 bits (173), Expect = 7e-11, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 58/164 (35%), Gaps = 32/164 (19%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 +IAL IDG N+ F+ID K+ + ++ Y L Sbjct: 38 RIALLIDGPNM----LRKEFNIDLDKIREVLNEFGDIVIGRVYLNQYASD--------KL 85 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGC 124 ++ + GF+ +DVE+AVDA E ++ + + D Sbjct: 86 IEAVINQGFEPKI--------------SAGDVDVEMAVDATELVFNPNIDTIAYVTRDAD 131 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F + + + KKV ++ S L+ ADY + + Sbjct: 132 FLPAIRKAKERGKKVIVIGAEPGF----STALQNIADYVIKIGE 171 >gi|301166431|emb|CBW26007.1| hypothetical protein BMS_1128 [Bacteriovorax marinus SJ] Length = 190 Score = 70.5 bits (172), Expect = 8e-11, Method: Composition-based stats. Identities = 34/180 (18%), Positives = 70/180 (38%), Gaps = 28/180 (15%) Query: 6 EKIALFIDGANL----YASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 +++A+ +DG N+ +A S+ +++ L+ + R Y+ + Sbjct: 9 QQVAVLVDGNNIERSIHAESERHSTMLNFDTLIPKLLVNRGLNRLIYFREGKNISSKLAE 68 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 LH Y+G + S D+ L++ A + ++ ++ ++I SG Sbjct: 69 RLHD-----KYHG---------------SVRPCHKSADIPLSIKATQLAQKVDTIIIMSG 108 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 D + LV L+ + +V I + S S L +ADYF + + P + Sbjct: 109 DSDYIELVNHLKSEGVRVEIAAI----ESTTSHLLIEEADYFHPITSDDWFTLKLPSNKR 164 >gi|172060127|ref|YP_001807779.1| hypothetical protein BamMC406_1072 [Burkholderia ambifaria MC40-6] gi|171992644|gb|ACB63563.1| protein of unknown function DUF88 [Burkholderia ambifaria MC40-6] Length = 501 Score = 70.5 bits (172), Expect = 8e-11, Method: Composition-based stats. Identities = 39/178 (21%), Positives = 67/178 (37%), Gaps = 23/178 (12%) Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 A+F D N+ + + D + +L+ + ++ Y + Sbjct: 11 AVFCDFENVALGVRDAKYEKFDIQPVLERLLLKGSIVVKKAYC--------DWERYKGFK 62 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124 +H F+++ R+ K+S D+ L VDA + ++ VI SGD Sbjct: 63 ASMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVDTFVIISGDSD 115 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182 F+ LV+ L+ KKV V S SD L D F+ L E R + ++ Sbjct: 116 FSPLVSKLRENAKKVIGVGVKKS----TSDLLVANCDEFIFYDDLVREQQRAQAKREQ 169 >gi|325525773|gb|EGD03507.1| hypothetical protein B1M_16120 [Burkholderia sp. TJI49] Length = 287 Score = 70.5 bits (172), Expect = 8e-11, Method: Composition-based stats. Identities = 39/171 (22%), Positives = 64/171 (37%), Gaps = 23/171 (13%) Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 A+F D N+ + + D + +L+ + ++ Y + Sbjct: 2 AVFCDFENVALGVRDAKYEKFDIKPVLERLLLKGSIVVKKAYC--------DWDRYKGFK 53 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124 +H F+++ R+ K+S D+ L VDA + ++ VI SGD Sbjct: 54 AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVDTFVIISGDSD 106 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 F+ LV+ L+ KKV V S SD L D F+ L E R Sbjct: 107 FSPLVSKLRENAKKVIGVGVKKS----TSDLLVANCDEFIFYDDLVREQQR 153 >gi|296109488|ref|YP_003616437.1| protein of unknown function DUF88 [Methanocaldococcus infernus ME] gi|295434302|gb|ADG13473.1| protein of unknown function DUF88 [Methanocaldococcus infernus ME] Length = 173 Score = 70.5 bits (172), Expect = 8e-11, Method: Composition-based stats. Identities = 34/163 (20%), Positives = 59/163 (36%), Gaps = 32/163 (19%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 KIAL IDG N+ F+ID K+ + ++ Y L Sbjct: 24 KIALLIDGPNM----LRKEFNIDLDKIREILSEFGDIVIGRVYL--------NQYASEKL 71 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGC 124 ++ + GF+ +DVE+AVDA E ++ + + D Sbjct: 72 IEAVINQGFEPKI--------------SAGDVDVEMAVDATELVFNPNIDTIAYVTRDAD 117 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F + + K KK+ ++ S L++ ADY + + Sbjct: 118 FLPAIRKAKEKGKKIIVIGAEPGF----SKALQKIADYVIKIN 156 >gi|209517483|ref|ZP_03266324.1| protein of unknown function DUF88 [Burkholderia sp. H160] gi|209502137|gb|EEA02152.1| protein of unknown function DUF88 [Burkholderia sp. H160] Length = 505 Score = 70.5 bits (172), Expect = 9e-11, Method: Composition-based stats. Identities = 42/181 (23%), Positives = 66/181 (36%), Gaps = 25/181 (13%) Query: 1 MFDPREKI--ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 M E + ALF D N+ + +D D + +L+ + ++ Y Sbjct: 1 MASSNENVSMALFCDFENVALGVRDAKYDKFDIKLVLERLLLKGSIVVKKAYC------- 53 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLE 114 + +H F+++ R+ K+S D+ L VDA + + Sbjct: 54 -DWDRYKSFKGAMHEANFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVN 105 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 VI SGD F+ LV+ L+ K+V V S SD L D F L E Sbjct: 106 TFVIISGDSDFSPLVSKLRENDKQVIGVGVQQS----TSDLLIANCDEFFFYDDLVRESQ 161 Query: 175 R 175 R Sbjct: 162 R 162 >gi|197123307|ref|YP_002135258.1| hypothetical protein AnaeK_2905 [Anaeromyxobacter sp. K] gi|196173156|gb|ACG74129.1| protein of unknown function DUF88 [Anaeromyxobacter sp. K] Length = 253 Score = 70.5 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 36/170 (21%), Positives = 57/170 (33%), Gaps = 26/170 (15%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 ++IALFID NL + D + L + V+ Y Sbjct: 5 HSDQRIALFIDFENLVTRTGLSAETFDLQPALDTLLEKGKVVYRRAYA------------ 52 Query: 63 LHPLLDWLHYNGFQVVAKVA-KEFTENCGRKRV-KSSMDVELAVDAFEQS---EGLEHLV 117 DW ++ E + R K+ D+ L +DA E + E ++ V Sbjct: 53 -----DWTRFSAATPRLHEKGVELVDVPPSTRAGKNGADMRLVIDALELAYLREHIDTFV 107 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 I SGD F L L+ + V ++ S + D F+ L Sbjct: 108 IASGDSDFCPLAYKLRENDRTV----IGMAVREATSPLFVKACDEFIYLR 153 >gi|91785005|ref|YP_560211.1| hypothetical protein Bxe_A0775 [Burkholderia xenovorans LB400] gi|91688959|gb|ABE32159.1| Conserved hypothetical protein [Burkholderia xenovorans LB400] Length = 480 Score = 70.5 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 42/182 (23%), Positives = 66/182 (36%), Gaps = 25/182 (13%) Query: 1 MFDPREKI--ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 M E + ALF D N+ + +D D + +L+ + ++ Y Sbjct: 1 MASSNETVSMALFCDFENVALGVRDAKYDKFDIKLVLERLLLKGSIVVKKAYC------- 53 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLE 114 + +H F+++ R+ K+S D+ L VDA + + Sbjct: 54 -DWDRYKSFKGAMHEANFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVN 105 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 VI SGD F+ LV+ L+ K+V V S SD L D F L E Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKQVIGVGVQQS----TSDLLVANCDEFFFYDDLVRESQ 161 Query: 175 RD 176 R Sbjct: 162 RT 163 >gi|171909553|ref|ZP_02925023.1| hypothetical protein VspiD_00235 [Verrucomicrobium spinosum DSM 4136] Length = 312 Score = 70.2 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 33/178 (18%), Positives = 69/178 (38%), Gaps = 24/178 (13%) Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 A+++D N+ ++ + +D +K+++ + ++ Y + Sbjct: 54 AVYLDLENIVLGAQEARYPKVDIQKIMERLLLKGHIVTKKAYC--------DWERYKDFK 105 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124 LH ++++ R+ K+S D+ + VDA + ++ VI SGD Sbjct: 106 RPLHEAAYELIEIPHV-------RQSGKNSADIRMVVDALDLCYTKGHVDTFVIISGDSD 158 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL-KNEIARDPDEDK 181 F+ LV+ L+ K V + + S+ D F+ L + E +R K Sbjct: 159 FSPLVSKLRENAKTV----IGMGVKNSTSNLFITNCDEFIYYDDLVRKEQSRASRSTK 212 >gi|220918096|ref|YP_002493400.1| protein of unknown function DUF88 [Anaeromyxobacter dehalogenans 2CP-1] gi|219955950|gb|ACL66334.1| protein of unknown function DUF88 [Anaeromyxobacter dehalogenans 2CP-1] Length = 253 Score = 70.2 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 36/170 (21%), Positives = 57/170 (33%), Gaps = 26/170 (15%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 ++IALFID NL + D + L + V+ Y Sbjct: 5 HSDQRIALFIDFENLVTRTGLSAETFDLQPALDTLLEKGKVVYRRAYA------------ 52 Query: 63 LHPLLDWLHYNGFQVVAKVA-KEFTENCGRKRV-KSSMDVELAVDAFEQS---EGLEHLV 117 DW ++ E + R K+ D+ L +DA E + E ++ V Sbjct: 53 -----DWTRFSAATPRLHEKGVELVDVPPSTRAGKNGADMRLVIDALELAYLREHIDTFV 107 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 I SGD F L L+ + V ++ S + D F+ L Sbjct: 108 IASGDSDFCPLAYKLRENDRTV----IGMAVREATSPLFVKACDEFIYLR 153 >gi|296157195|ref|ZP_06840031.1| protein of unknown function DUF88 [Burkholderia sp. Ch1-1] gi|295892531|gb|EFG72313.1| protein of unknown function DUF88 [Burkholderia sp. Ch1-1] Length = 479 Score = 70.2 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 42/182 (23%), Positives = 66/182 (36%), Gaps = 25/182 (13%) Query: 1 MFDPREKI--ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 M E + ALF D N+ + +D D + +L+ + ++ Y Sbjct: 1 MASSNETVSMALFCDFENVALGVRDAKYDKFDIKLVLERLLLKGSIVVKKAYC------- 53 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLE 114 + +H F+++ R+ K+S D+ L VDA + + Sbjct: 54 -DWDRYKSFKGAMHEANFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVN 105 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 VI SGD F+ LV+ L+ K+V V S SD L D F L E Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKQVIGVGVQQS----TSDLLVANCDEFFFYDDLVRESQ 161 Query: 175 RD 176 R Sbjct: 162 RT 163 >gi|134295221|ref|YP_001118956.1| hypothetical protein Bcep1808_1110 [Burkholderia vietnamiensis G4] gi|134138378|gb|ABO54121.1| protein of unknown function DUF88 [Burkholderia vietnamiensis G4] Length = 507 Score = 70.2 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 39/171 (22%), Positives = 65/171 (38%), Gaps = 23/171 (13%) Query: 9 ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 A+F D N+ + ++ D + +L+ + ++ Y + Sbjct: 11 AVFCDFENVALGVRDAKYEKFDIKPVLERLLLKGSIVVKKAYC--------DWERYKGFK 62 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124 +H F+++ R+ K+S D+ L VDA + ++ VI SGD Sbjct: 63 ASMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVDTFVIISGDSD 115 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 F+ LV+ L+ KKV V S SD L D F+ L E R Sbjct: 116 FSPLVSKLRENAKKVIGVGVKKS----TSDLLVANCDEFIFYDDLVREQQR 162 >gi|170732518|ref|YP_001764465.1| hypothetical protein Bcenmc03_1168 [Burkholderia cenocepacia MC0-3] gi|169815760|gb|ACA90343.1| protein of unknown function DUF88 [Burkholderia cenocepacia MC0-3] Length = 498 Score = 70.2 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 39/171 (22%), Positives = 65/171 (38%), Gaps = 23/171 (13%) Query: 9 ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 A+F D N+ + ++ D + +L+ + ++ Y + Sbjct: 11 AVFCDFENVALGVRDAKYEKFDIKPVLERLLLKGSIVVKKAYC--------DWDRYKGFK 62 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124 +H F+++ R+ K+S D+ L VDA + ++ VI SGD Sbjct: 63 ASMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVDTFVIISGDSD 115 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 F+ LV+ L+ KKV V S SD L D F+ L E R Sbjct: 116 FSPLVSKLRENAKKVIGVGVKKS----TSDLLVANCDEFIFYDDLVREQQR 162 >gi|78065774|ref|YP_368543.1| hypothetical protein Bcep18194_A4302 [Burkholderia sp. 383] gi|77966519|gb|ABB07899.1| protein of unknown function DUF88 [Burkholderia sp. 383] Length = 496 Score = 70.2 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 39/171 (22%), Positives = 65/171 (38%), Gaps = 23/171 (13%) Query: 9 ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 A+F D N+ + ++ D + +L+ + ++ Y + Sbjct: 11 AVFCDFENVALGVRDAKYEKFDIKPVLERLLLKGSIVVKKAYC--------DWDRYKGFK 62 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124 +H F+++ R+ K+S D+ L VDA + ++ VI SGD Sbjct: 63 ASMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVDTFVIISGDSD 115 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 F+ LV+ L+ KKV V S SD L D F+ L E R Sbjct: 116 FSPLVSKLRENAKKVIGVGVKKS----TSDLLVANCDEFIFYDDLVREQQR 162 >gi|254482849|ref|ZP_05096086.1| hypothetical protein GPB2148_1333 [marine gamma proteobacterium HTCC2148] gi|214036930|gb|EEB77600.1| hypothetical protein GPB2148_1333 [marine gamma proteobacterium HTCC2148] Length = 64 Score = 70.2 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Query: 5 REKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ 58 EKI++F+D N+Y + + + DY + +I AY Y T GD +Q Sbjct: 1 MEKISIFVDVQNIYYTCRQTYQRNFDYNRFWVEITQGRELIGAYAYATDRGDAKQ 55 >gi|229819539|ref|YP_002881065.1| protein of unknown function DUF88 [Beutenbergia cavernae DSM 12333] gi|229565452|gb|ACQ79303.1| protein of unknown function DUF88 [Beutenbergia cavernae DSM 12333] Length = 378 Score = 69.8 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 37/167 (22%), Positives = 63/167 (37%), Gaps = 23/167 (13%) Query: 3 DPREKIALFIDGANLYASSKAL--GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 D E++A+F+D NL ++ G D+ + A R V+ Y + + Sbjct: 2 DADERLAVFLDYENLALGAREHLGGMAFDFGPIADALAVRGRVVVRRAYADWSYFDDDRR 61 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLV 117 + + E + G R + D+++ VDA E + E + V Sbjct: 62 ALTRHQV-------------ELIEMPQRMGASRKNA-ADIKMVVDAIEMAFEREYISTFV 107 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 + +GD F+ LV L+ K+V V S S L D F+ Sbjct: 108 MCTGDSDFSPLVHKLRELNKRVIGVGVENS----TSRLLPPACDEFL 150 >gi|308233771|ref|ZP_07664508.1| hypothetical protein AvagD15_01897 [Atopobium vaginae DSM 15829] gi|328943670|ref|ZP_08241135.1| hypothetical protein HMPREF0091_10360 [Atopobium vaginae DSM 15829] gi|327491639|gb|EGF23413.1| hypothetical protein HMPREF0091_10360 [Atopobium vaginae DSM 15829] Length = 260 Score = 69.8 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 39/187 (20%), Positives = 66/187 (35%), Gaps = 32/187 (17%) Query: 1 MFDPREK-IALFIDGANLYASSKAL---------GFDIDYRKLLKAFRSRAIVIRAYYYT 50 M D ++ IA+FID N A + A + + + + + Y Sbjct: 1 MSDINQRSIAVFIDYENFAAGAGASKNKASAHGKRTQPNMKCVFSRLVDKGRITLKRAYC 60 Query: 51 TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ- 109 + + LH G + E + K+S D+ LAVDA E Sbjct: 61 --------DWQRFKQDVTPLHELGIE-----LIEIPDRSSTG--KNSADIRLAVDATEMC 105 Query: 110 --SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 + ++ VI SGD F+ LV+ L+ K V + + S L D F+ Sbjct: 106 LTKDHIDTFVILSGDSDFSPLVSKLKEFGKTV----IGIGAKPITSSLLVEVCDEFIFYE 161 Query: 168 YLKNEIA 174 + ++ Sbjct: 162 DILSQAG 168 >gi|261415964|ref|YP_003249647.1| protein of unknown function DUF88 [Fibrobacter succinogenes subsp. succinogenes S85] gi|261372420|gb|ACX75165.1| protein of unknown function DUF88 [Fibrobacter succinogenes subsp. succinogenes S85] gi|302326593|gb|ADL25794.1| conserved domain protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 384 Score = 69.8 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 37/159 (23%), Positives = 64/159 (40%), Gaps = 24/159 (15%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 IA+FID NL K G L+ ++ Y + L PL Sbjct: 4 IAIFIDAENLTNWVKNNGVQ----SLMDELLPLGQIVVRKAY------GKWSTPQLIPLQ 53 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCF 125 L+ NGF+ + F G K+S D+++ VD E + ++ +V+ +GD F Sbjct: 54 SALNENGFE----LVHTFHPVSG----KNSTDIKMTVDTMEVALDSQVQWIVLATGDSDF 105 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 + L L+ + K+V V S S+ ++ ++ Sbjct: 106 SPLFRKLREQGKEVIGV----GPKSPLSECVKNSCSRYI 140 >gi|108762087|ref|YP_628313.1| hypothetical protein MXAN_0030 [Myxococcus xanthus DK 1622] gi|108465967|gb|ABF91152.1| conserved hypothetical protein [Myxococcus xanthus DK 1622] Length = 320 Score = 69.8 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 38/181 (20%), Positives = 62/181 (34%), Gaps = 26/181 (14%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 +IALFID NL ++ D + L + V+ Y Sbjct: 9 RIALFIDFENLVTNTGISSASFDLQPSLDRLLEKGKVVFRRAYC---------------- 52 Query: 67 LDWLHYNGFQVVAKVA-KEFTENCGRKRV-KSSMDVELAVDAFEQS---EGLEHLVIFSG 121 DW + ++ E + R K+ D+ L +DA E E ++ VI SG Sbjct: 53 -DWSRFAEAKIRLHEFGVELIDVPPSTRAGKNGADMRLVIDALELCYARESIDTFVIGSG 111 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 D F L L+ + V L+ S + D F+ L ++ + E Sbjct: 112 DSDFCPLAYKLRENGRTV----IGLAVKESTSPLFVKACDEFIYLRPRQSRSDKGDKEKG 167 Query: 182 K 182 + Sbjct: 168 R 168 >gi|219848822|ref|YP_002463255.1| hypothetical protein Cagg_1924 [Chloroflexus aggregans DSM 9485] gi|219543081|gb|ACL24819.1| protein of unknown function DUF88 [Chloroflexus aggregans DSM 9485] Length = 334 Score = 69.8 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 61/163 (37%), Gaps = 29/163 (17%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 +IAL IDG N A++ A ++++ + I++ Y Q++ Sbjct: 24 RIALLIDGENC-AATYA-------DQVMEMADKQGILVTRRVYANWSVSAHQKWIEAVAR 75 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGC 124 D L + G KS++D+ L +DA + + + +GDG Sbjct: 76 YD-LRPIYY-------------AGIAPGKSTIDMVLTIDAMDLHYRQVCDDFCLVTGDGD 121 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 + LV L+ V ++ T + L+ F+ LA Sbjct: 122 YAPLVKRLRAGGANVIVIGTEQ-----TATVLKEVCSTFIPLA 159 >gi|206559459|ref|YP_002230220.1| hypothetical protein BCAL1072 [Burkholderia cenocepacia J2315] gi|198035497|emb|CAR51375.1| conserved hypothetical protein [Burkholderia cenocepacia J2315] Length = 491 Score = 69.8 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 39/171 (22%), Positives = 65/171 (38%), Gaps = 23/171 (13%) Query: 9 ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 A+F D N+ + ++ D + +L+ + ++ Y + Sbjct: 11 AVFCDFENVALGVRDAKYEKFDIKPVLERLLLKGSIVVKKAYC--------DWDRYKGFK 62 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124 +H F+++ R+ K+S D+ L VDA + ++ VI SGD Sbjct: 63 ASMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVDTFVIISGDSD 115 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 F+ LV+ L+ KKV V S SD L D F+ L E R Sbjct: 116 FSPLVSKLRENAKKVIGVGVKKS----TSDLLVANCDEFIFYDDLVREQQR 162 >gi|254245848|ref|ZP_04939169.1| hypothetical protein BCPG_00568 [Burkholderia cenocepacia PC184] gi|124870624|gb|EAY62340.1| hypothetical protein BCPG_00568 [Burkholderia cenocepacia PC184] Length = 500 Score = 69.4 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 39/171 (22%), Positives = 64/171 (37%), Gaps = 23/171 (13%) Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 A+F D N+ + + D + +L+ + ++ Y + Sbjct: 11 AVFCDFENVALGVRDAKYEKFDIKPVLERLLLKGSIVVKKAYC--------DWDRYKGFK 62 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124 +H F+++ R+ K+S D+ L VDA + ++ VI SGD Sbjct: 63 ASMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVDTFVIISGDSD 115 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 F+ LV+ L+ KKV V S SD L D F+ L E R Sbjct: 116 FSPLVSKLRENAKKVIGVGVKKS----TSDLLVANCDEFIFYDDLVREQQR 162 >gi|153004596|ref|YP_001378921.1| hypothetical protein Anae109_1734 [Anaeromyxobacter sp. Fw109-5] gi|152028169|gb|ABS25937.1| protein of unknown function DUF88 [Anaeromyxobacter sp. Fw109-5] Length = 249 Score = 69.4 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 39/168 (23%), Positives = 60/168 (35%), Gaps = 22/168 (13%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 ++IALFID NL + D + L A + V+ Y D + Sbjct: 6 SHDQRIALFIDFENLVTRTGLSAETFDLQPALDALLEKGKVVFRRAYA----DWTRFAEA 61 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIF 119 L D G ++V + K+ DV L +DA E + E ++ VI Sbjct: 62 TQRLHDK----GVELVDVP-------PSTRAGKNGADVRLVIDALELAYLREHIDTFVIA 110 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 SGD F L L+ + V ++ S + D F+ L Sbjct: 111 SGDSDFCPLAYKLRENDRNV----IGMAVREATSPLFVKACDQFIYLR 154 >gi|86159239|ref|YP_466024.1| hypothetical protein Adeh_2817 [Anaeromyxobacter dehalogenans 2CP-C] gi|85775750|gb|ABC82587.1| protein of unknown function DUF88 [Anaeromyxobacter dehalogenans 2CP-C] Length = 253 Score = 69.4 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 36/170 (21%), Positives = 57/170 (33%), Gaps = 26/170 (15%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 ++IALFID NL + D + L + V+ Y Sbjct: 5 HSDQRIALFIDFENLVTRTGLSAETFDLQPALDTLLEKGKVVFRRAYA------------ 52 Query: 63 LHPLLDWLHYNGFQVVAKVA-KEFTENCGRKRV-KSSMDVELAVDAFEQS---EGLEHLV 117 DW ++ E + R K+ D+ L +DA E + E ++ V Sbjct: 53 -----DWTRFSAATPRLHEKGVELVDVPPSTRAGKNGADMRLVIDALELAYLREHIDTFV 107 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 I SGD F L L+ + V ++ S + D F+ L Sbjct: 108 IASGDSDFCPLAYKLRENDRTV----IGMAVREATSPLFVKACDEFIYLR 153 >gi|107022270|ref|YP_620597.1| hypothetical protein Bcen_0714 [Burkholderia cenocepacia AU 1054] gi|116689215|ref|YP_834838.1| hypothetical protein Bcen2424_1193 [Burkholderia cenocepacia HI2424] gi|105892459|gb|ABF75624.1| protein of unknown function DUF88 [Burkholderia cenocepacia AU 1054] gi|116647304|gb|ABK07945.1| protein of unknown function DUF88 [Burkholderia cenocepacia HI2424] Length = 498 Score = 69.0 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 39/171 (22%), Positives = 64/171 (37%), Gaps = 23/171 (13%) Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 A+F D N+ + + D + +L+ + ++ Y + Sbjct: 11 AVFCDFENVALGVRDAKYEKFDIKPVLERLLLKGSIVVKKAYC--------DWDRYKGFK 62 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124 +H F+++ R+ K+S D+ L VDA + ++ VI SGD Sbjct: 63 ASMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVDTFVIISGDSD 115 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 F+ LV+ L+ KKV V S SD L D F+ L E R Sbjct: 116 FSPLVSKLRENAKKVIGVGVKKS----TSDLLVANCDEFIFYDDLVREQQR 162 >gi|254413548|ref|ZP_05027318.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC 7420] gi|196179655|gb|EDX74649.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC 7420] Length = 399 Score = 69.0 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 40/168 (23%), Positives = 66/168 (39%), Gaps = 29/168 (17%) Query: 6 EKIALFIDGANLYASSKALGF-DIDY-RKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 EK+A+F+D NL G+ +D LL+ V+ Y GD + Sbjct: 3 EKVAIFLDVENL------SGWLKVDGGEALLERANELGRVVVRRAY----GDFSIASVSV 52 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFS 120 L+ GF EF + K+S D+++ VD E LE +V+ + Sbjct: 53 R--QPELNLLGF--------EFVHVYHPVKGKNSADIQIVVDVMEYLARIPDLEWVVLAT 102 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 GD F+ L L+ K V V S S+ +++ + F+ + Sbjct: 103 GDSDFSPLFRRLRELGKSVVGV----GPRSALSEAVKKSCNRFIYIDE 146 >gi|302342036|ref|YP_003806565.1| hypothetical protein Deba_0599 [Desulfarculus baarsii DSM 2075] gi|301638649|gb|ADK83971.1| protein of unknown function DUF88 [Desulfarculus baarsii DSM 2075] Length = 200 Score = 69.0 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 37/173 (21%), Positives = 69/173 (39%), Gaps = 14/173 (8%) Query: 3 DPREKIALFIDGANLYASSKALG-FDIDYRKLLKAFRSRAIVIRAYYY-----TTVVGDP 56 +++A+ IDG + G + + +L ++R YYY + P Sbjct: 1 MHDKRVAVLIDGGYMDKILYEAGSMKVSFSRLANKLARGKPLLRTYYYHCLPHLSQRPTP 60 Query: 57 EQQ--FSPLHPLLDWLHYNG-FQVVA-KVAKEFTENCGRKRVK-SSMDVELAVDA--FEQ 109 E+Q ++ + L F+V +A +N G + ++ +DV LAVD Sbjct: 61 EEQTFYANKERFFNALRRLDDFEVRLGHLAPRGWDNAGNRILEQKGVDVYLAVDVCRLSY 120 Query: 110 SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADY 162 + + +++ +GDG VA + KV + S + S+QL D Sbjct: 121 TGSVSEIILVAGDGDLAPAVALAKDLGIKV-CLWFGESPSTRVSEQLWYICDQ 172 >gi|302336205|ref|YP_003801412.1| protein of unknown function DUF88 [Olsenella uli DSM 7084] gi|301320045|gb|ADK68532.1| protein of unknown function DUF88 [Olsenella uli DSM 7084] Length = 258 Score = 69.0 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 39/176 (22%), Positives = 62/176 (35%), Gaps = 36/176 (20%) Query: 8 IALFIDGANLYASSKALGFD--------IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59 +A+ ID NL + + D +++L+ + + Y Sbjct: 9 LAVLIDYENLALGTGRRKRNGHQEPGPRPDAKRILERLVDKGRITAKRAY---------- 58 Query: 60 FSPLHPLLDW---LHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGL 113 D LH G +++ + FT K+S D+ LAVDA E + + Sbjct: 59 -CDWQRFDDAITPLHELGIELIEIPDRAFT-------GKNSADIRLAVDAMEMCLTKDHI 110 Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 + I SGD F+ LVA L+ K V V S L D F+ + Sbjct: 111 DTFAILSGDSDFSPLVAKLKEFGKTVIGV----GMKESTSTLLAEVCDEFLFYEDI 162 >gi|167589253|ref|ZP_02381641.1| hypothetical protein BuboB_28211 [Burkholderia ubonensis Bu] Length = 280 Score = 69.0 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 39/171 (22%), Positives = 64/171 (37%), Gaps = 23/171 (13%) Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 A+F D N+ + + D + +L+ + ++ Y + Sbjct: 2 AVFCDFENVALGVRDAKYEKFDIKPVLERLLLKGSIVVKKAYC--------DWDRYKGFK 53 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124 +H F+++ R+ K+S D+ L VDA + ++ VI SGD Sbjct: 54 ASMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVDTFVIISGDSD 106 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 F+ LV+ L+ KKV V S SD L D F+ L E R Sbjct: 107 FSPLVSKLRENAKKVIGVGVKQS----TSDLLVANCDEFIFYDDLVREQQR 153 >gi|186475309|ref|YP_001856779.1| hypothetical protein Bphy_0541 [Burkholderia phymatum STM815] gi|184191768|gb|ACC69733.1| protein of unknown function DUF88 [Burkholderia phymatum STM815] Length = 440 Score = 69.0 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 39/171 (22%), Positives = 63/171 (36%), Gaps = 23/171 (13%) Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 ALF D N+ + + D + +L+ + ++ Y + Sbjct: 11 ALFCDFENVALGVRDAKYEKFDIKLVLERLLLKGSIVVKKAYC--------DWDRYKGFK 62 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124 +H F+++ R+ K+S D+ L VDA + + VI SGD Sbjct: 63 AAMHEANFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVNTFVIISGDSD 115 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 F+ LV+ L+ K+V V S SD L D F+ L E R Sbjct: 116 FSPLVSKLRENAKQVIGVGVQRS----TSDLLTANCDEFIFYDDLVRESQR 162 >gi|325109651|ref|YP_004270719.1| hypothetical protein Plabr_3100 [Planctomyces brasiliensis DSM 5305] gi|324969919|gb|ADY60697.1| protein of unknown function DUF88 [Planctomyces brasiliensis DSM 5305] Length = 441 Score = 68.2 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 32/164 (19%), Positives = 56/164 (34%), Gaps = 24/164 (14%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 +IA+F+D NL K G +L++ + Y Q Sbjct: 2 SSENRIAIFVDTENLTGWVKQHGI----VRLIEEIGQTGHLFVRKAYGCWEQGNLQVQQQ 57 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFS 120 + L+ GF+ + F G K+S D+ + +D E E +V+ + Sbjct: 58 V------LNRCGFE----LVHTFHPVGG----KNSADIRITIDVMETVLCHDFETIVLAT 103 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 GD F+ L L + K + S SD + ++ Sbjct: 104 GDSDFSPLFRRLNQLGKHI----IGAGPHSPLSDSVASICQKYI 143 >gi|317407351|gb|EFV87317.1| hypothetical protein HMPREF0005_05421 [Achromobacter xylosoxidans C54] Length = 170 Score = 68.2 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 42/177 (23%), Positives = 65/177 (36%), Gaps = 23/177 (12%) Query: 9 ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 ALF D N+ + + D R +L+ + ++ Y + Sbjct: 11 ALFCDFENVALGVRDTKYQKFDIRPVLERLLLKGSIVVKKAYC--------DWERYKEFK 62 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE---QSEGLEHLVIFSGDGC 124 +H F+++ R+ K+S D+ L VDA + + VI SGD Sbjct: 63 APMHEANFELIEIPHV-------RQSGKNSADIRLVVDALDFCYTKSHVNTFVIISGDSD 115 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 F+ LV+ L+ KKV V S SD L D F+ L E R D + Sbjct: 116 FSPLVSKLRENDKKVIGVGVKQS----TSDLLIANCDEFIFYDDLAREGQRAADARR 168 >gi|114778764|ref|ZP_01453574.1| hypothetical protein SPV1_03033 [Mariprofundus ferrooxydans PV-1] gi|114551015|gb|EAU53578.1| hypothetical protein SPV1_03033 [Mariprofundus ferrooxydans PV-1] Length = 277 Score = 68.2 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 36/172 (20%), Positives = 66/172 (38%), Gaps = 23/172 (13%) Query: 9 ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 AL+ D N+ + + D D +++L+ + ++ Y ++ Sbjct: 11 ALYCDFENVALGVRDIKLDAFDIQRVLERLLLKGNIVVKKAYC--------DWARYKDFK 62 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124 +H F+++ R+ K+S D+ + VDA + ++ VI SGD Sbjct: 63 APMHEAAFELIEIPHV-------RQSGKNSADIRMVVDALDLCYTKAHVDTFVIISGDSD 115 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 F+ LV+ L+ K V V S SD L D F+ L + + Sbjct: 116 FSPLVSKLRENNKLVIGVGVKQS----TSDLLIANCDEFIYYDDLVRDSEKQ 163 >gi|149179181|ref|ZP_01857749.1| hypothetical protein PM8797T_16967 [Planctomyces maris DSM 8797] gi|148841999|gb|EDL56394.1| hypothetical protein PM8797T_16967 [Planctomyces maris DSM 8797] Length = 210 Score = 67.8 bits (165), Expect = 6e-10, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 57/156 (36%), Gaps = 18/156 (11%) Query: 3 DPREKIALFIDGANLYASSKALGFD----IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ 58 +++ ++IDG NLY K G+ +D K +A VI Y+T +V P Sbjct: 7 SKKQRTVIYIDGFNLYFGMKDNGWKRYYWLDLWKFGEAISQDREVISVKYFTAIVSKPAA 66 Query: 59 QFSPLHPLLDW---------LHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ 109 + + + + K E + + DV +A Sbjct: 67 KNVRQRKFISAQKTLNNPPDIIKGKYYSKTKHCLS-CEEPYERHEEKMTDVNIATHLVND 125 Query: 110 S--EGLEHLVIFSGDGCFTTLVAAL--QRKVKKVTI 141 + + + ++ SGD +T + + Q + KKV + Sbjct: 126 AWLDLYDVAIVVSGDSDLSTPIRTVNNQFEDKKVIV 161 >gi|257784783|ref|YP_003180000.1| hypothetical protein Apar_0980 [Atopobium parvulum DSM 20469] gi|257473290|gb|ACV51409.1| protein of unknown function DUF88 [Atopobium parvulum DSM 20469] Length = 260 Score = 67.8 bits (165), Expect = 6e-10, Method: Composition-based stats. Identities = 44/180 (24%), Positives = 69/180 (38%), Gaps = 19/180 (10%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 P+ IA+FID NL ALG ++ + + + D + + Sbjct: 7 PQSSIAVFIDYENL-----ALGTG---KRKRNGHQEPGHLPEMKLIMERLVDKG-RITAK 57 Query: 64 HPLLDWLHY-NGFQVVAKVAKEFTENCGRKRV-KSSMDVELAVDAFEQ---SEGLEHLVI 118 DW + N + ++ E E R K+S D+ LAVDA E + ++ + Sbjct: 58 RAYCDWQRFPNAITPLHELGIELIEIPDRAYTGKNSADIRLAVDAVEMCLTKDHIDTFAV 117 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178 SGD F+ LVA L+ K V + S L D F+ + + R PD Sbjct: 118 LSGDSDFSPLVAKLKEAGKTV----IGVGMKESTSSLLAEVCDEFIFYEDILSS-GRIPD 172 >gi|53804338|ref|YP_114060.1| cold-shock DNA-binding domain-containing protein [Methylococcus capsulatus str. Bath] gi|53758099|gb|AAU92390.1| cold-shock DNA-binding domain protein [Methylococcus capsulatus str. Bath] Length = 305 Score = 67.8 bits (165), Expect = 6e-10, Method: Composition-based stats. Identities = 28/160 (17%), Positives = 57/160 (35%), Gaps = 26/160 (16%) Query: 7 KIALFIDG------ANLYASSKALGFDIDYRKLLKAF-----------RSRAIVIRAYYY 49 +IA+F DG +N Y + ++ L + ++ A Y+ Sbjct: 7 RIAVFYDGNYFFKVSNYYLYQHPRRARLSFKGLHEFILAEVSKNEGLDARHCQIVDAAYF 66 Query: 50 ----TTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVD 105 T + + D L + + + + + +DV LA++ Sbjct: 67 RGRLTAQQAQDQDKLFADRIFEDVLMRANITLFQRHLRTRPDGS---FEEKGIDVWLALE 123 Query: 106 AFEQSE--GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVS 143 A+E + + V+ +GDG F LV L +V +++ Sbjct: 124 AYEMASLKKYDVCVLVAGDGDFVPLVNKLNTLGSRVMLIA 163 >gi|331700009|ref|YP_004336248.1| hypothetical protein Psed_6296 [Pseudonocardia dioxanivorans CB1190] gi|326954698|gb|AEA28395.1| Domain of unknown function DUF88 [Pseudonocardia dioxanivorans CB1190] Length = 367 Score = 67.8 bits (165), Expect = 6e-10, Method: Composition-based stats. Identities = 41/169 (24%), Positives = 63/169 (37%), Gaps = 23/169 (13%) Query: 1 MFDPREKIALFIDGANLYASSKA-LGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ 58 M E+IALF+D NL ++ LG D+ + A R V+ Y + Sbjct: 1 MISDDERIALFLDYENLAIGAREGLGVSPFDFGPIADALAERGRVVARRAYADWSYFDDD 60 Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEH 115 + + E + G K++ D++LAVDA E + + Sbjct: 61 RRLLARAQV-------------ELIEIPQRLG-GSRKNAADIKLAVDAIELAYERGFVTT 106 Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 I +GD FT LV L+ K+V + S S L D F+ Sbjct: 107 FAIGTGDSDFTPLVHKLREMDKRV----IGIGVQSSTSALLPPACDEFL 151 >gi|115377562|ref|ZP_01464761.1| hypothetical protein STIAU_6634 [Stigmatella aurantiaca DW4/3-1] gi|115365449|gb|EAU64485.1| hypothetical protein STIAU_6634 [Stigmatella aurantiaca DW4/3-1] Length = 359 Score = 67.5 bits (164), Expect = 7e-10, Method: Composition-based stats. Identities = 37/167 (22%), Positives = 58/167 (34%), Gaps = 28/167 (16%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 +IALF+D NL ++ D + L + V+ Y Sbjct: 54 RIALFLDFENLVTNTGISTAGFDLQPSLDRLLEKGKVVFRRAY-----------CDWSRF 102 Query: 67 LDW---LHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFS 120 D LH +G ++V + K+ D+ L +DA E E ++ VI S Sbjct: 103 SDAKGRLHEHGVELVDVP-------PSTRAGKNGADMRLVIDALELCYAREHIDTFVIAS 155 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 GD F L L+ + V L+ S + D F+ L Sbjct: 156 GDSDFCPLAYKLRENGRTV----IGLAVKESTSPLFVKACDEFLYLR 198 >gi|310821658|ref|YP_003954016.1| hypothetical protein STAUR_4409 [Stigmatella aurantiaca DW4/3-1] gi|309394730|gb|ADO72189.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1] Length = 331 Score = 67.5 bits (164), Expect = 7e-10, Method: Composition-based stats. Identities = 37/167 (22%), Positives = 58/167 (34%), Gaps = 28/167 (16%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 +IALF+D NL ++ D + L + V+ Y Sbjct: 26 RIALFLDFENLVTNTGISTAGFDLQPSLDRLLEKGKVVFRRAY-----------CDWSRF 74 Query: 67 LDW---LHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFS 120 D LH +G ++V + K+ D+ L +DA E E ++ VI S Sbjct: 75 SDAKGRLHEHGVELVDVP-------PSTRAGKNGADMRLVIDALELCYAREHIDTFVIAS 127 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 GD F L L+ + V L+ S + D F+ L Sbjct: 128 GDSDFCPLAYKLRENGRTV----IGLAVKESTSPLFVKACDEFLYLR 170 >gi|291612593|ref|YP_003522750.1| hypothetical protein Slit_0121 [Sideroxydans lithotrophicus ES-1] gi|291582705|gb|ADE10363.1| protein of unknown function DUF88 [Sideroxydans lithotrophicus ES-1] Length = 274 Score = 67.5 bits (164), Expect = 9e-10, Method: Composition-based stats. Identities = 35/165 (21%), Positives = 61/165 (36%), Gaps = 23/165 (13%) Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 ALF D N+ + + D +K+L+ + ++ Y + Sbjct: 11 ALFCDFENVALGVRDAKYAQFDIKKVLERLLLKGSIVVKKAYC--------DWDRYKEFK 62 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124 +H F+++ R+ K+S D+ + VDA + ++ VI SGD Sbjct: 63 ATMHEAAFELIEIPHV-------RQSGKNSADIRMVVDALDLCYTKAHVDTFVIISGDSD 115 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 F+ LV+ L+ K V + SD L D F+ L Sbjct: 116 FSPLVSKLRENNKYV----IGIGVKDSTSDLLSANCDEFIFYDDL 156 >gi|18977686|ref|NP_579043.1| hypothetical protein PF1314 [Pyrococcus furiosus DSM 3638] gi|18893418|gb|AAL81438.1| hypothetical protein PF1314 [Pyrococcus furiosus DSM 3638] Length = 185 Score = 67.1 bits (163), Expect = 9e-10, Method: Composition-based stats. Identities = 37/152 (24%), Positives = 53/152 (34%), Gaps = 21/152 (13%) Query: 7 KIALFIDGANLYASSK-------ALGFDIDYRKLLKAFRS-RAIVIRAYYYTTVVGDPEQ 58 K A+ IDG N+ K L DID+RK + +S V A Y Sbjct: 2 KAAVLIDGENVVMCLKNALGGKVQLDRDIDWRKFFEYLKSLGYEVTIARIYA-----NPF 56 Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEH 115 F + + L G +VV KS+ D + VD ++ Sbjct: 57 IFLKNPHIANNLEKMGIKVVLAE-----STMKENGPKSTTDATMIVDGMSILYERPAIDA 111 Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLS 147 L+I SGD F L + + V V+ S Sbjct: 112 LIIVSGDRDFLPLAEKARELGRTVLFVAFPDS 143 >gi|188586884|ref|YP_001918429.1| protein of unknown function DUF88 [Natranaerobius thermophilus JW/NM-WN-LF] gi|179351571|gb|ACB85841.1| protein of unknown function DUF88 [Natranaerobius thermophilus JW/NM-WN-LF] Length = 188 Score = 66.7 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 35/188 (18%), Positives = 69/188 (36%), Gaps = 20/188 (10%) Query: 1 MFDPREKIALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIV--IRAYYY-------T 50 M + R+ + +FIDG L LG IDY +L + ++ +R YYY Sbjct: 1 MRNYRQSLNIFIDGGFLEKVFAKLGEPKIDYLRLYSWISRQVMIPRLRTYYYHCLPYQGN 60 Query: 51 TVVGDPEQQFSPLHPLLDWLHYNG---FQVVAKVAKEFTENCGRKRVKSSMDVELAVDAF 107 + +FS + + ++ + + +E + +DV +A+D Sbjct: 61 PPSQGEKDRFSKKQRFFNKISSLPRSEVRLGSLAFRGRSEEKQPIFEQKKVDVLMALDIA 120 Query: 108 EQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165 + + + H+ + S D F + + K V ++ + P L D + Sbjct: 121 RSAFEQRISHIALISSDSDFVPAIQMAKDKGIIVYLLYSHEIKPH---HDLVDACDEVIY 177 Query: 166 L--AYLKN 171 L +K Sbjct: 178 LTMDDIKE 185 >gi|51891180|ref|YP_073871.1| hypothetical protein STH42 [Symbiobacterium thermophilum IAM 14863] gi|51854869|dbj|BAD39027.1| conserved hypothetical protein [Symbiobacterium thermophilum IAM 14863] Length = 264 Score = 66.7 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 32/172 (18%), Positives = 65/172 (37%), Gaps = 23/172 (13%) Query: 7 KIALFIDGANLYASSKA-LGFDIDYRKLLKAFRS-----RAIVIRAYYYTTVVGDPEQQF 60 + +F+D N+Y S K G D +L+ + R V + Y + Sbjct: 2 RSVIFMDYENIYWSMKQQYGVAPDLDRLITSLREMGERGNGQVCLMHAYADFDHEE---- 57 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLV 117 L+ L + F++N K++ D+E+++DA E ++ V Sbjct: 58 --FRGLMSDLQRRSVE----PRHVFSKNYEDGTRKNAADIEMSLDALEIMYTRSDIDTFV 111 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 + GD ++ L+ + K+V +V+ + S + + F + L Sbjct: 112 LVCGDRDMIQVIRKLRARGKQVHVVAVEKTM----SKDVMSFVNQFTTIEAL 159 >gi|169825423|ref|YP_001695598.1| hypothetical protein Bsph_p009 [Lysinibacillus sphaericus C3-41] gi|168994700|gb|ACA42239.1| conserved hypothetical protein [Lysinibacillus sphaericus C3-41] Length = 181 Score = 66.3 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 29/173 (16%), Positives = 67/173 (38%), Gaps = 14/173 (8%) Query: 5 REKIALFIDGANLYASSKALGFD-ID----YRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59 +K A+ +D N+ + LG + + + L+ + ++A+Y V + + Sbjct: 1 MKKTAILVDEMNVIQQLRRLGIHGFNPWNAFYQALQRWNGDKKGVKAFYCANVPKEDAEH 60 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG-LEHLVI 118 + + L + +V ++ R+ K +DV LA+D E + ++ + I Sbjct: 61 EKR-NNFFEGLINHNIKVSVGTV--VYDSNSRRIAKG-VDVALALDIVEHARSGVQDIFI 116 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 +GD + Q +V +V ++ + + AD + L + Sbjct: 117 CTGDADVVPAIIRAQELGSRVHVV----VSRAIPAKNITLAADSVVRLEDILE 165 >gi|149922564|ref|ZP_01910994.1| hypothetical protein PPSIR1_41429 [Plesiocystis pacifica SIR-1] gi|149816591|gb|EDM76086.1| hypothetical protein PPSIR1_41429 [Plesiocystis pacifica SIR-1] Length = 264 Score = 66.3 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 42/175 (24%), Positives = 64/175 (36%), Gaps = 27/175 (15%) Query: 8 IALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 IA++ D N+ + G+D D +L+ R V+ Y Sbjct: 11 IAVYADYENVALGAIEAGYDAFDIALVLERLLERGNVVVRKAYC---------------- 54 Query: 67 LDWLHYNGFQVVAKVAK-EFTENCGRK-RVKSSMDVELAVDAFEQSE---GLEHLVIFSG 121 DW+ Y G + E E K K+S D+ L VDA + + + + +G Sbjct: 55 -DWVRYKGERKRLHERSFELVEVPHVKLSGKNSADIRLVVDALDLAHTKAHVGVFALLTG 113 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 D F+ LV+ L+ K V V S S L D F+ L + RD Sbjct: 114 DSDFSPLVSKLRENGKWVVGVGVRQS----TSKLLVEICDEFIYYDDLVRDKRRD 164 >gi|319791587|ref|YP_004153227.1| hypothetical protein Varpa_0898 [Variovorax paradoxus EPS] gi|315594050|gb|ADU35116.1| protein of unknown function DUF88 [Variovorax paradoxus EPS] Length = 279 Score = 66.3 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 6/76 (7%) Query: 95 KSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMA 152 K+S D+ LAVDA + +E + +V+ S D F LV+ L+ K +V + Sbjct: 78 KNSTDIALAVDAIDLVIAERPDVVVLVSSDSDFAPLVSRLREKGCRVC----GIGQQGKT 133 Query: 153 SDQLRRQADYFMDLAY 168 D+ D F+DLA+ Sbjct: 134 GDETVGIYDTFIDLAH 149 >gi|150402231|ref|YP_001329525.1| hypothetical protein MmarC7_0304 [Methanococcus maripaludis C7] gi|150033261|gb|ABR65374.1| protein of unknown function DUF88 [Methanococcus maripaludis C7] Length = 215 Score = 65.9 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 64/181 (35%), Gaps = 36/181 (19%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 K+AL IDG N+ F++D K+ A ++ Y Sbjct: 20 TNKMALLIDGPNM----LRKEFNVDLDKVRDALEQFGDIVVGRVYLNQYASD-------- 67 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGD 122 L++ + GF+ +DVE+AVD E + L+ LV + D Sbjct: 68 KLIEAIANQGFEPRI--------------SAGDVDVEMAVDGTELIFNKNLDTLVYMTRD 113 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM----DLAYLKNEIARDPD 178 F + + + K++ +V S ++ AD+ + D K ++ + Sbjct: 114 ADFLPAIRKAKERGKQIIVVGAEPGF----STAIQNIADHVIRVEEDFELDKEKLEQKKR 169 Query: 179 E 179 E Sbjct: 170 E 170 >gi|158336589|ref|YP_001517763.1| hypothetical protein AM1_3453 [Acaryochloris marina MBIC11017] gi|158306830|gb|ABW28447.1| conserved domain protein [Acaryochloris marina MBIC11017] Length = 459 Score = 65.9 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 40/166 (24%), Positives = 72/166 (43%), Gaps = 27/166 (16%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 +A+F D N+ +++ + + L++ +S+ Y+ + E L+ Sbjct: 95 VAVFWDYENVKIAAQGIQAPL-AESLVEYSQSQGHTRLKIVYSNWRREKE-------SLV 146 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSS-MDVELAVDAFEQS---EGLEHLVIFSGDG 123 L+ GF+ + K + +DV+L VD + + H +I +GD Sbjct: 147 QALYSLGFEPI-----------HVSTGKENAVDVKLTVDCLNTAYQYPDVGHFIIVTGDR 195 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 F LV AL+ K+VT++ +AS+QL AD F+DL L Sbjct: 196 DFVPLVNALKTLEKQVTLI----GRAEVASNQLLLSADEFIDLEKL 237 >gi|256394876|ref|YP_003116440.1| hypothetical protein Caci_5741 [Catenulispora acidiphila DSM 44928] gi|256361102|gb|ACU74599.1| protein of unknown function DUF88 [Catenulispora acidiphila DSM 44928] Length = 435 Score = 65.9 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 35/180 (19%), Positives = 64/180 (35%), Gaps = 26/180 (14%) Query: 5 REKIALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI------VIRAYYYT 50 ++ A+ +D + A++ + G ++DY L+ A RA V+R Y+Y Sbjct: 1 MDRCAVLVDAGYVLAAAANVVSGDPGRPGIEVDYPGLVTALTERAAAETGLPVLRVYWYD 60 Query: 51 TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110 + L +LD L ++ K + G+ K +D L D + Sbjct: 61 AAPATGPTRDQRLLRVLDGL-------KLRLGKLVRRDDGKFEQKG-VDTFLHADLTGLA 112 Query: 111 EG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 + +V+ SGD V Q ++ + S +L D M L+ Sbjct: 113 RKRAVADVVLVSGDEDLLHAVEEAQEYGTRIHLWGAASDYNQ--SLELIAAVDKSMTLSE 170 >gi|326317506|ref|YP_004235178.1| hypothetical protein Acav_2702 [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374342|gb|ADX46611.1| Domain of unknown function DUF88 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 179 Score = 65.9 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 34/178 (19%), Positives = 69/178 (38%), Gaps = 19/178 (10%) Query: 12 IDGANLYASSKALGFDIDYRKLLKAFR--SRAIVIRAYYYTTVVGDPEQQFSPLHPLLDW 69 +DGA L+ K+ DY KL + + +YY +V + H + Sbjct: 7 VDGAYLFNYGKS--RPFDYLKLKNEITRLNGGPIRESYYLNSVSDPATDAQNAFHSWIKT 64 Query: 70 LHYNG--FQVVAKVAKEFT------ENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIF 119 +G F+V K + + V+ +DV +A + + + L++ Sbjct: 65 APPHGPKFRVQLYKLKRMHMSCAACGHSSDRWVQKGVDVGIATLIIKLAAQNVYDRLILS 124 Query: 120 SGDGCFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 +GDG F ++ ++ + K+V + + S S L+ +D + + + I R Sbjct: 125 AGDGDFEDAISYVKSELHKEVWVSGSAASL----SPDLQSYSDNVLWMEDMSPTIDRT 178 >gi|121596271|ref|YP_988167.1| hypothetical protein Ajs_3985 [Acidovorax sp. JS42] gi|120608351|gb|ABM44091.1| protein of unknown function DUF88 [Acidovorax sp. JS42] Length = 179 Score = 65.9 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 26/157 (16%), Positives = 57/157 (36%), Gaps = 23/157 (14%) Query: 24 LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAK 83 + ID+ KL + +++ G + L NGF+V+ Sbjct: 41 YNWKIDFGKLFQFAGGDRNLVK------KAGLFGSRPPKNDSLWTAAEKNGFEVIV---- 90 Query: 84 EFTENCGRKRVKSSMDVELAVDAFEQSEGL-----EHLVIFSGDGCFTTLVAALQRKVKK 138 + K +D ++ E S + + + + SGD + + L+++ Sbjct: 91 --YDRNIAGHEKK-IDTDIVATMIEDSYEILTIGQDEITLVSGDSDYVPAIEKLKKRGIP 147 Query: 139 VTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 V +V A+ +L+ A F++L + +A+ Sbjct: 148 VHVV-----FWGHAARELKEVATKFVNLDPYLDHLAK 179 >gi|120611183|ref|YP_970861.1| hypothetical protein Aave_2514 [Acidovorax citrulli AAC00-1] gi|120589647|gb|ABM33087.1| protein of unknown function DUF88 [Acidovorax citrulli AAC00-1] Length = 179 Score = 65.5 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 36/177 (20%), Positives = 70/177 (39%), Gaps = 19/177 (10%) Query: 12 IDGANLYASSKALGFDIDYRKLLKAFR--SRAIVIRAYYYTTVVGDPEQQFSPLHPLLDW 69 IDGA L+ K+ DY KL + + +YY +V + H + Sbjct: 7 IDGAYLFNYGKS--KPFDYLKLKNEITRLNGGPIRESYYLNSVSDPATDAQNAFHSWIKT 64 Query: 70 LHYNG--FQVVAKVAKEFTEN------CGRKRVKSSMDVELAVDAFEQSEG--LEHLVIF 119 +G F+V K+ N + V+ +DV +A + + + L++ Sbjct: 65 APPHGPKFRVQLYKLKKMHMNCAACGHSSDRWVQKGVDVGIATLIIKLAAQNVYDRLILS 124 Query: 120 SGDGCFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 +GDG F ++ ++ + K+V + + S S L+ +D + + + I R Sbjct: 125 AGDGDFEDAISYVKSELHKEVWVSGSAASL----SPDLQSYSDNVLWMEDMSPTIDR 177 >gi|220907876|ref|YP_002483187.1| hypothetical protein Cyan7425_2469 [Cyanothece sp. PCC 7425] gi|219864487|gb|ACL44826.1| protein of unknown function DUF88 [Cyanothece sp. PCC 7425] Length = 629 Score = 64.8 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 42/189 (22%), Positives = 70/189 (37%), Gaps = 41/189 (21%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 K A+F D NL + F ++LL++ ++ T QF+ Sbjct: 29 KSAIFYDIENL---LRGYNFS---QELLESLS-----LKEIANTIRKTGKIDQFAVQKAY 77 Query: 67 LDWLHYNGFQVVAKVAKEFTENCG----------RKRVKSSMDVELAVDAFEQS---EGL 113 +W K + G R+R K++ D++L +DA + + Sbjct: 78 ANWSDP-----RLKTMRVEINELGIDPIQVFGFSRERTKNAADIQLVIDAINLANLRPSI 132 Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 + VI SGDG F +L L KKV + S AS + D F+++ Sbjct: 133 DTFVIVSGDGGFASLAKYLHECGKKV----ICCAYKSSASKTFQSVCDGFVEIVE----- 183 Query: 174 ARDPDEDKK 182 PD D++ Sbjct: 184 ---PDVDRR 189 >gi|330509013|ref|YP_004385441.1| hypothetical protein MCON_3373 [Methanosaeta concilii GP-6] gi|328929821|gb|AEB69623.1| conserved hypothetical protein [Methanosaeta concilii GP-6] Length = 184 Score = 64.8 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 41/186 (22%), Positives = 68/186 (36%), Gaps = 27/186 (14%) Query: 6 EKIALFIDGANLYASSKALGFDI-----DYRKLLKAFRSRAIVIRAYYYT-------TVV 53 ++ A+FIDGA L +K L D D + +R YYY Sbjct: 10 DRAAVFIDGAYL---TKILDVDFGKPKIDLARFSDILCGNYERLRTYYYNCMPYQSCPST 66 Query: 54 GDPEQQFSPLHPLLDWLHYNG-FQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS-- 110 + ++F+ + + L F+V G + V+ +D+ LA D S Sbjct: 67 DEESRRFASMDKFVYTLRKLPRFEVKL----GRLGRVGGEFVQKRVDIALAADLVRLSCG 122 Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA-YL 169 + VI +GD F + A + VT+ + S D+L D + L Sbjct: 123 RMIGKAVIVTGDSDFLPAIEAAKDAGVLVTLFYSESSIH----DELLSAVDERTPIDQDL 178 Query: 170 KNEIAR 175 + +AR Sbjct: 179 IDLVAR 184 >gi|221195605|ref|ZP_03568659.1| conserved hypothetical protein [Atopobium rimae ATCC 49626] gi|221184371|gb|EEE16764.1| conserved hypothetical protein [Atopobium rimae ATCC 49626] Length = 256 Score = 64.4 bits (156), Expect = 6e-09, Method: Composition-based stats. Identities = 38/169 (22%), Positives = 63/169 (37%), Gaps = 24/169 (14%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 P+ IA+FID N + G + + + + + Y +S Sbjct: 7 PQSSIAVFIDYEN--FPVGSNGSRGALKLVFERLVDKGRITIKRAYC--------DWSRH 56 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE---QSEGLEHLVIFS 120 + LH G + E +N ++ K+S D+ LAVDA E + ++ I S Sbjct: 57 EAVKPALHELGVE-----LIEIPDNS--QKGKNSADIHLAVDALEACLTKDHIDTFAILS 109 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 GD F+ LVA L+ K V + + L D F+ + Sbjct: 110 GDSDFSPLVAKLKEYDKTVIGIGRKKG----TASLLENVCDEFIFYEDI 154 >gi|74317958|ref|YP_315698.1| hypothetical protein Tbd_1940 [Thiobacillus denitrificans ATCC 25259] gi|74057453|gb|AAZ97893.1| conserved hypothetical protein [Thiobacillus denitrificans ATCC 25259] Length = 308 Score = 64.4 bits (156), Expect = 6e-09, Method: Composition-based stats. Identities = 38/178 (21%), Positives = 64/178 (35%), Gaps = 23/178 (12%) Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 A+F D N+ K + D R +L+ + ++ Y + Sbjct: 10 AVFCDFENVAIGLKEGNYPDFKIRPVLERLLLKGSIVVKKAYC--------DWDRYKEYK 61 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124 +H F+++ R+ K+S D+ + VDA + ++ VI SGD Sbjct: 62 RDMHEAAFELIEIPHV-------RQSGKNSADIRMVVDALDLCYTKAHIDAFVIISGDSD 114 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182 F+ L++ L+ K V + AS L D F+ L AR KK Sbjct: 115 FSPLISKLKENGKSV----IGIGVRGSASSLLISNCDEFIFYEDLVQPKARPTRPAKK 168 >gi|121583279|ref|YP_973715.1| hypothetical protein Pnap_4909 [Polaromonas naphthalenivorans CJ2] gi|120596537|gb|ABM39973.1| protein of unknown function DUF88 [Polaromonas naphthalenivorans CJ2] Length = 279 Score = 64.4 bits (156), Expect = 6e-09, Method: Composition-based stats. Identities = 27/166 (16%), Positives = 50/166 (30%), Gaps = 40/166 (24%) Query: 7 KIALFIDGAN-----LYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 ++A+ +D N L + L+ V+ + + Sbjct: 11 RVAVLVDCDNVTPEILEYA-------------LRVIAQFGRVV-------LRRGYGNHTT 50 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIF 119 + + L F ++ G+ D+ LA+DA E + + Sbjct: 51 LANKWQEALVRLAFT----PCLQYQYASGKNTA----DIALALDALEAMFDNRADTFCLV 102 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165 + D F L L+ + V IV D LR +D F + Sbjct: 103 TSDSDFAYLCRKLRERGATVCIVGEAK-----TPDALRNASDQFFE 143 >gi|159905990|ref|YP_001549652.1| hypothetical protein MmarC6_1608 [Methanococcus maripaludis C6] gi|159887483|gb|ABX02420.1| protein of unknown function DUF88 [Methanococcus maripaludis C6] Length = 215 Score = 64.4 bits (156), Expect = 6e-09, Method: Composition-based stats. Identities = 32/162 (19%), Positives = 58/162 (35%), Gaps = 32/162 (19%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 K+AL IDG N+ F++D K+ A ++ Y Sbjct: 20 TNKMALLIDGPNM----LRKEFNVDLDKVRDALEQFGDIVVGRVYLNQYASD-------- 67 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGD 122 L++ + GF+ +DVE+AVD E + L+ LV + D Sbjct: 68 KLIEAIANQGFEPRI--------------SAGDVDVEMAVDGTELIFNKNLDTLVYMTRD 113 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F + + + K++ +V S ++ AD+ + Sbjct: 114 ADFLPAIRKAKERGKQIIVVGAEPGF----STAIQNIADHVI 151 >gi|150378220|ref|YP_001314815.1| hypothetical protein Smed_6284 [Sinorhizobium medicae WSM419] gi|150032767|gb|ABR64882.1| conserved hypothetical protein [Sinorhizobium medicae WSM419] Length = 48 Score = 64.4 bits (156), Expect = 7e-09, Method: Composition-based stats. Identities = 32/43 (74%), Positives = 37/43 (86%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIV 43 MFD REKIAL IDGANL+A+SKALGF+ID+ KLL AFR RA + Sbjct: 1 MFDQREKIALLIDGANLHAASKALGFEIDFCKLLSAFRRRASL 43 >gi|187735246|ref|YP_001877358.1| protein of unknown function DUF88 [Akkermansia muciniphila ATCC BAA-835] gi|187425298|gb|ACD04577.1| protein of unknown function DUF88 [Akkermansia muciniphila ATCC BAA-835] Length = 251 Score = 64.0 bits (155), Expect = 8e-09, Method: Composition-based stats. Identities = 36/165 (21%), Positives = 60/165 (36%), Gaps = 30/165 (18%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 +I + ID N + + KL++ +R ++ Y + + + S Sbjct: 5 RIVVLIDADNTNLA--------NLEKLIQYISTRGRIVVKRAYGNWSENLKDKKS----- 51 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDA--FEQSEGLEHLVIFSGDGC 124 L +GF K F G+ D+ LA+DA + VI S D Sbjct: 52 --ALQQSGF----KTEHYFNCVPGKNAT----DIALAIDAVDLLHKNSYDSFVIVSSDSD 101 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 FT L L+ V ++ S+ AS+ R D F D+ + Sbjct: 102 FTPLSIYLKESG--VYVIGFGKSN---ASEAFRNGCDEFKDIEKI 141 >gi|150399127|ref|YP_001322894.1| hypothetical protein Mevan_0373 [Methanococcus vannielii SB] gi|150011830|gb|ABR54282.1| protein of unknown function DUF88 [Methanococcus vannielii SB] Length = 215 Score = 64.0 bits (155), Expect = 8e-09, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 58/162 (35%), Gaps = 32/162 (19%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 K+AL IDG N+ F++D K+ A ++ Y Sbjct: 20 TNKMALLIDGPNM----LRKEFNVDLDKVRDALDEFGDIVVGRVYLNQYASD-------- 67 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGD 122 L++ + GF+ +DVE+AVD E + ++ +V + D Sbjct: 68 KLIEAIANQGFEPRI--------------SAGDVDVEMAVDGTELIFNKNIDTIVYMTRD 113 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F + + + K++ +V S ++ AD+ + Sbjct: 114 ADFLPAIRKAKERGKQIIVVGAEPGF----STAIQNIADHVI 151 >gi|75909290|ref|YP_323586.1| hypothetical protein Ava_3082 [Anabaena variabilis ATCC 29413] gi|75703015|gb|ABA22691.1| Protein of unknown function DUF88 [Anabaena variabilis ATCC 29413] Length = 261 Score = 63.6 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 36/149 (24%), Positives = 63/149 (42%), Gaps = 24/149 (16%) Query: 31 RKLLKAFRSRAIVIRAY-YYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENC 89 + LL+ S+ +I YY + + L L +N V Sbjct: 36 KLLLEFATSKGRLIHKNVYYNSKFKNQADAKRN----LANLSFNWIDV------------ 79 Query: 90 GRKRVKSSMDVELAVDAFEQSEGL--EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLS 147 +K+S D +L VD + + L + +I SGDG FTTL+ LQ+ K+V +++ + Sbjct: 80 -PCLLKNSADNQLIVDCLQVNNNLSPDIFIIVSGDGDFTTLINPLQKLGKQVIVIAEAGN 138 Query: 148 DPSMASDQLRRQADYFMDLAYLKNEIARD 176 +L+ AD F + L +I ++ Sbjct: 139 VK----QKLKELADEFYFIEELSQKIQQE 163 >gi|219850648|ref|YP_002465081.1| hypothetical protein Cagg_3809 [Chloroflexus aggregans DSM 9485] gi|219544907|gb|ACL26645.1| protein of unknown function DUF88 [Chloroflexus aggregans DSM 9485] Length = 319 Score = 63.2 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 40/195 (20%), Positives = 73/195 (37%), Gaps = 33/195 (16%) Query: 4 PREKI------ALFIDGANLYASSKALGF------DIDYRKLLKAFRSRAIVIRAYYYTT 51 P E+ A+F D NL K GF ++ +++L A R + Sbjct: 14 PMERTPMPFNTAIFYDIENL---IKGYGFSTQTITNVSLKEILTALRQTGKIGHIAVQRA 70 Query: 52 VVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS- 110 + + + ++ L + QV R+ +++ DV+LA+DA + + Sbjct: 71 YANWSDPRLGVMRDEINELGIDPIQVF---------GFAREPKRNAADVQLAIDAIDLAY 121 Query: 111 --EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 GL+ VI SGDG F L L K V + S + + D F+ + Sbjct: 122 IRPGLDVFVIVSGDGGFAALAKKLHEYGKTV----IGCAYRSAVNKTFQAVCDEFVWITD 177 Query: 169 LKNEIA--RDPDEDK 181 + ++ P + + Sbjct: 178 TEEKVQPAHTPGQIR 192 >gi|294339327|emb|CAZ87683.1| conserved hypothetical protein [Thiomonas sp. 3As] Length = 268 Score = 62.8 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 30/170 (17%), Positives = 53/170 (31%), Gaps = 40/170 (23%) Query: 3 DPREKIALFIDGAN-----LYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 D ++A+ +D N L + L+ V+ + Sbjct: 20 DHESRVAVLVDCDNTTPEILEYA-------------LRVVAQFGRVV-------LRRGYG 59 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEH 115 + + + L F +F G+ D+ LA+DA E + + Sbjct: 60 NHATLANKWQEALVRLAFT----PCLQFQYAAGKNTS----DIALALDAVEALFDKRADT 111 Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165 + + D F L L+ + V IV S D LR +D F + Sbjct: 112 FCLVTSDSDFAYLCRKLRERGATVHIVGEAKSP-----DALRNASDQFFE 156 >gi|192362254|ref|YP_001981906.1| hypothetical protein CJA_1417 [Cellvibrio japonicus Ueda107] gi|190688419|gb|ACE86097.1| conserved hypothetical protein [Cellvibrio japonicus Ueda107] Length = 178 Score = 62.8 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 27/155 (17%), Positives = 57/155 (36%), Gaps = 24/155 (15%) Query: 26 FDIDYRKLLKAFRSR-AIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKE 84 + +D+ KL + A V +A + + + + NGF+V Sbjct: 43 WKLDFGKLFQFAGGEKAEVRKAALFGSRPPKNDSLWVAAQK-------NGFEVTT----- 90 Query: 85 FTENCGRKRVKSSMDVELAVDAFEQSEGL----EHLVIFSGDGCFTTLVAALQRKVKKVT 140 + N K +D ++ E S + + + + SGD + + L+++ V Sbjct: 91 YDRNVANAEKK--IDTDIVATMIEDSYEILQPGDEVTLVSGDSDYVPAIEKLKKRGIAVH 148 Query: 141 IVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 +V A+ +L+ A F +L + + R Sbjct: 149 VV-----FWKHAARELKEAASTFTELDPYLDHLKR 178 >gi|148359486|ref|YP_001250693.1| hypothetical protein LPC_1394 [Legionella pneumophila str. Corby] gi|148281259|gb|ABQ55347.1| hypothetical protein LPC_1394 [Legionella pneumophila str. Corby] Length = 211 Score = 62.8 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 36/185 (19%), Positives = 66/185 (35%), Gaps = 25/185 (13%) Query: 3 DPREKIALFIDGANLYASSK---ALGFDIDYRKL-LKAFRSRAIVIRAYYYTT-VVGDPE 57 ++ ++IDG NLY + + +D + L + S + + YYT + Sbjct: 1 MNNKRTTIYIDGFNLYYGCLKRTSYKW-LDLKALFINLLESSHNIQKIKYYTAPISSRDG 59 Query: 58 QQFSPLHP--LLDWL------------HYNGFQVVAKVAKEFTENCGRKRV-KSSMDVEL 102 + S L L HY +V AKV + + + DV L Sbjct: 60 NEASRFRQKYYLQALESYIPEIEIYYGHYLTHEVSAKVVNPPPDFIKIYKTEEKGSDVNL 119 Query: 103 AVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKK-VTIVSTVLSDPSMASDQLRRQ 159 A+ + + + VI S D + ++ + K + +V S +L + Sbjct: 120 ALHVLNDAWLDAYDCAVIVSNDSDLAESLRLVKSQTNKLIGVVFPNTDHKRRPSRELAKY 179 Query: 160 ADYFM 164 AD F+ Sbjct: 180 AD-FI 183 >gi|150021343|ref|YP_001306697.1| hypothetical protein Tmel_1465 [Thermosipho melanesiensis BI429] gi|149793864|gb|ABR31312.1| protein of unknown function DUF88 [Thermosipho melanesiensis BI429] Length = 188 Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 28/178 (15%), Positives = 66/178 (37%), Gaps = 19/178 (10%) Query: 7 KIALFIDGANLYASS-----KALGFDIDYRKLLKAFRS----RAIVIRAYYYTTVV--GD 55 + + +DG LY S KA +D ++ ++K + +IR ++ + G Sbjct: 2 RAIIIVDGNYLYKSCMNEWKKAPKYDFCFQNIIKFYSKVINTEMHLIRVRFHDSPPCEGG 61 Query: 56 PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEH 115 + +L+ L V G + +DV +A+D + ++ Sbjct: 62 DNNFRTKKEKVLNKLRSIQ---RIDVVLGRCRKIGNTFSQKGVDVNMALDIVRYANDIDT 118 Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSM-ASDQ----LRRQADYFMDLAY 168 ++I SGD + + ++ ++ + S ++D+ L +D++ Sbjct: 119 IIIISGDSDLVPAFDEARNRGAEIVLLLSPHHFNSTGSADESIKKLIVASDFYFTFDD 176 >gi|239813866|ref|YP_002942776.1| hypothetical protein Vapar_0857 [Variovorax paradoxus S110] gi|239800443|gb|ACS17510.1| protein of unknown function DUF88 [Variovorax paradoxus S110] Length = 275 Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 6/76 (7%) Query: 95 KSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMA 152 K+S D+ LAVDA + +E + +V+ S D F LV L+ K +V L Sbjct: 69 KNSTDIALAVDALDLVIAERPDVVVLVSSDSDFAPLVIRLREKGCRVC----GLGQQGKT 124 Query: 153 SDQLRRQADYFMDLAY 168 ++ D F DL + Sbjct: 125 GEETVAVYDEFTDLQH 140 >gi|45358613|ref|NP_988170.1| hypothetical protein MMP1050 [Methanococcus maripaludis S2] gi|44921371|emb|CAF30606.1| conserved hypothetical protein [Methanococcus maripaludis S2] Length = 215 Score = 61.7 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 29/160 (18%), Positives = 58/160 (36%), Gaps = 32/160 (20%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 K+AL IDG N+ F++D K+ A ++ Y L Sbjct: 22 KMALLIDGPNM----LRKEFNVDLDKVRDALEQFGDIVVGRVYLNQYASD--------KL 69 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGC 124 ++ + GF+ +DVE+AV+ E + ++ +V + D Sbjct: 70 IEAIANQGFEPRI--------------SAGDVDVEMAVEGTELIFNKNIDTIVYMTRDAD 115 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F + + + K++ +V S ++ AD+ + Sbjct: 116 FLPAIRKAKERGKQIIVVGAEPGF----STAIQNIADHVI 151 >gi|313681102|ref|YP_004058841.1| hypothetical protein Ocepr_2220 [Oceanithermus profundus DSM 14977] gi|313153817|gb|ADR37668.1| hypothetical protein Ocepr_2220 [Oceanithermus profundus DSM 14977] Length = 242 Score = 61.7 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 33/189 (17%), Positives = 61/189 (32%), Gaps = 28/189 (14%) Query: 7 KIALFIDGANLYASSKA---LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGD---PEQQF 60 ++ +++DG N Y + + +++ KL K + ++ Y+T V + Q Sbjct: 30 RLIVYVDGFNFYYGAVKQTPYKW-LNFNKLFKILFPKDDLVLVRYFTARVKNNPLNPGQR 88 Query: 61 SPLHPLLDWLH-------YNGF---QVVAKVAKEFTENCGR--KRVKSSMDVELAVDAFE 108 L L + GF V R K + DV LA Sbjct: 89 ERQGTYLRALRTLPDFEIHEGFFLSHPVNMPVAPPGTGFARVLKFEEKGSDVNLATYLML 148 Query: 109 QS--EGLEHLVIFSGDGCFTTLVAALQRK-VKKVTIVST------VLSDPSMASDQLRRQ 159 + + + V+ S D + + + K V +V S LR+ Sbjct: 149 DAIEDRFDTAVVVSHDSDLALPIQIVNERLGKPVGVVGYDPRFQRKYGKRPRTSKSLRKV 208 Query: 160 ADYFMDLAY 168 A ++ L Sbjct: 209 AAFYKTLRE 217 >gi|330503755|ref|YP_004380624.1| hypothetical protein MDS_2841 [Pseudomonas mendocina NK-01] gi|328918041|gb|AEB58872.1| hypothetical protein MDS_2841 [Pseudomonas mendocina NK-01] Length = 239 Score = 61.3 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 9/81 (11%) Query: 99 DVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156 D+ LA+DA E + + + D F L L+ + V IV D L Sbjct: 49 DIALALDAMEALFDHRADTFCLVTSDSDFAYLCRKLRERGATVCIVG-----EPKTPDAL 103 Query: 157 RRQADYFMDLAYLKNEIARDP 177 R +D F + + + E ++P Sbjct: 104 RNASDQFFE--WRREEHFQEP 122 >gi|154250322|ref|YP_001411147.1| hypothetical protein Fnod_1655 [Fervidobacterium nodosum Rt17-B1] gi|154154258|gb|ABS61490.1| protein of unknown function DUF88 [Fervidobacterium nodosum Rt17-B1] Length = 432 Score = 61.3 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 32/161 (19%), Positives = 58/161 (36%), Gaps = 37/161 (22%) Query: 12 IDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLH 71 +D +Y ++ G ++ Y + + + L+ Sbjct: 22 VDVQLVYNEAQKYGR----------------IVGGKAYGSWSK------HKMPSFV--LY 57 Query: 72 YNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG---LEHLVIFSGDGCFTTL 128 G +++ EF N K + D+ LAVD E + ++ + +GD FT L Sbjct: 58 NYGIELIEIPEAEFLPN-----KKGN-DIRLAVDCVEIALHNNVIDTFFLVTGDADFTAL 111 Query: 129 VAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 V L+ KKV ++ S AS +L D F+ + Sbjct: 112 VYKLKSYGKKVIALARTKS----ASYELVSAVDLFIPYEDI 148 >gi|266624411|ref|ZP_06117346.1| conserved hypothetical protein [Clostridium hathewayi DSM 13479] gi|288863732|gb|EFC96030.1| conserved hypothetical protein [Clostridium hathewayi DSM 13479] Length = 259 Score = 61.3 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 29/146 (19%), Positives = 57/146 (39%), Gaps = 24/146 (16%) Query: 6 EKIALFIDGANLYASSKALGFDIDYR-------KLLKAFRSRAIVIRAYYYTTVVGDPEQ 58 E + +F+D N+Y S K G ++ L++ S + Y D +Q Sbjct: 18 ENVGIFVDFDNIYYSLKEYG--VNPESPEYCVFSLMERIYSINKIRTLRAYA----DYDQ 71 Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEH 115 L L ++ ++ + + K++ D+EL+VDA E S ++ Sbjct: 72 VGVSLKHLQ--------EMRVQIKNVYGNGLEEEYRKNASDIELSVDALEIYYRSPEIDT 123 Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTI 141 V + D +++ L K K + + Sbjct: 124 FVFLTSDSDMIPIMSRLTYKGKHIHL 149 >gi|91776174|ref|YP_545930.1| hypothetical protein Mfla_1822 [Methylobacillus flagellatus KT] gi|91710161|gb|ABE50089.1| protein of unknown function DUF88 [Methylobacillus flagellatus KT] Length = 275 Score = 61.3 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 61/175 (34%), Gaps = 25/175 (14%) Query: 7 KIALFIDGANLYASSKALGFDID-YRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 ++A+ ID N + I+ +LL+ V Y Q++ + P Sbjct: 10 RLAILIDADNTF-------RFINVIDELLEEISKYGDVSIRRIYGDWTETKMQRWKEILP 62 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125 + + +++ G+ S++ ++ A+D + L+ I S D F Sbjct: 63 ----------KYAIQPIQQYANTKGKNSTDSALIID-AMDLLYTAP-LDGFCIVSSDSDF 110 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 T L L+ K+V D L + F+ + L E DP E Sbjct: 111 TRLATRLRESGKQVYGFGEQK-----TPDSLIAACNKFIYIEILSKEKLSDPPEP 160 >gi|113869183|ref|YP_727672.1| hypothetical protein H16_A3229 [Ralstonia eutropha H16] gi|113527959|emb|CAJ94304.1| conserved hypothetical protein [Ralstonia eutropha H16] Length = 265 Score = 60.9 bits (147), Expect = 7e-08, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 54/161 (33%), Gaps = 30/161 (18%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 ++A+ +D N ++ + +DY L+ V+ + Q + Sbjct: 11 RVAVLVDCDN---TTPEI---LDYA--LRVVAQFGRVV-------LRRGYGNQSTLGKTW 55 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGC 124 + L F ++ G+ D+ LA+DA E + + + D Sbjct: 56 QEALVRQAFT----PCLQYQYAAGKNTA----DIALALDALEAMFDHRADKFCLVTSDSD 107 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165 F L L+ + V IV + LR +D F + Sbjct: 108 FAYLCRKLRERGATVCIVGESK-----TPEALRNASDQFFE 143 >gi|303244983|ref|ZP_07331306.1| protein of unknown function DUF88 [Methanothermococcus okinawensis IH1] gi|302484635|gb|EFL47576.1| protein of unknown function DUF88 [Methanothermococcus okinawensis IH1] Length = 238 Score = 60.9 bits (147), Expect = 7e-08, Method: Composition-based stats. Identities = 27/166 (16%), Positives = 57/166 (34%), Gaps = 32/166 (19%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 ++AL +DG N+ F+ID K+ + ++ Y Sbjct: 20 NNRMALLVDGPNM----LRKEFNIDLDKIREVLDEFGTIVIGRVYLNQYASD-------- 67 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGD 122 L++ + GF+ +DVE+AV+ E ++ +V + D Sbjct: 68 KLIEAIANQGFEPRI--------------SAGDVDVEMAVEGTELIFNNNIDTIVYMTRD 113 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F + + KK+ ++ S ++ AD+ + + Sbjct: 114 ADFLPAIRKAKEHGKKIIVIGAEPGF----STAIQNIADHVIKIEE 155 >gi|84684164|ref|ZP_01012066.1| hypothetical protein 1099457000262_RB2654_16986 [Maritimibacter alkaliphilus HTCC2654] gi|84667917|gb|EAQ14385.1| hypothetical protein RB2654_16986 [Rhodobacterales bacterium HTCC2654] Length = 234 Score = 60.9 bits (147), Expect = 7e-08, Method: Composition-based stats. Identities = 21/98 (21%), Positives = 39/98 (39%), Gaps = 7/98 (7%) Query: 87 ENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVST 144 + + K++ D+ L +DA + + V+ S D FT L ++ + V Sbjct: 65 QESANTKGKNASDIGLVIDAMDLLHTGRFDGFVLVSSDSDFTALANRIREQGLTV----- 119 Query: 145 VLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182 + + LR F+ + + +E A P E KK Sbjct: 120 IGIGEGKTPESLRNVCSRFVMIENIVDEEAEKPAEKKK 157 >gi|149184904|ref|ZP_01863221.1| hypothetical protein ED21_17662 [Erythrobacter sp. SD-21] gi|148831015|gb|EDL49449.1| hypothetical protein ED21_17662 [Erythrobacter sp. SD-21] Length = 205 Score = 60.9 bits (147), Expect = 8e-08, Method: Composition-based stats. Identities = 26/156 (16%), Positives = 56/156 (35%), Gaps = 23/156 (14%) Query: 11 FIDGANLYASSKAL----GFDIDYRKLLKAFRS--RAIVIRAYYYTTVVGDPEQQF--SP 62 FIDG NL+ +K L + D L + YT + Q Sbjct: 13 FIDGQNLFKQAKRLFGHREPNFDPVALHREVSRMAGFAPGPVRVYTGIPAANRQPRWHLF 72 Query: 63 LHPLLDWLHYNGFQVVAKVA----KEFTENCGR-----KRVKSSMDVELAVDAFEQSEG- 112 + + + G V + ++ + G + + +D+ +A+D + Sbjct: 73 WNNKIQAMKRAGVTVTTRPLRYRKRQLFDEDGEVETITQAEEKGIDIRIALDLVRMARRE 132 Query: 113 -LEHLVIFSGDGCFTTLVAAL----QRKVKKVTIVS 143 L+ +I+S D +V+ + Q + +++ + S Sbjct: 133 ELDAAIIYSQDQDLNEVVSEIEAISQLQGREIPLAS 168 >gi|297619281|ref|YP_003707386.1| hypothetical protein Mvol_0754 [Methanococcus voltae A3] gi|297378258|gb|ADI36413.1| protein of unknown function DUF88 [Methanococcus voltae A3] Length = 253 Score = 60.5 bits (146), Expect = 9e-08, Method: Composition-based stats. Identities = 31/179 (17%), Positives = 60/179 (33%), Gaps = 36/179 (20%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 K+AL IDG N+ F++D K+ A ++ Y L Sbjct: 24 KMALLIDGPNM----LRKEFNVDLDKIRDAVEQFGTIVVGRVYLNQYASD--------KL 71 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGC 124 ++ + GF+ +DVE+AVD + ++ +V + D Sbjct: 72 IEAIANQGFEPRI--------------SAGDVDVEMAVDGTDLVHNKNIDTIVYMTRDAD 117 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM----DLAYLKNEIARDPDE 179 F + + + +V S ++ AD+ + D K ++ + E Sbjct: 118 FLPAMRKAKENGVGIIVVGAEPGF----SMAIQNIADHVIKVEEDFELNKQKLEQKKRE 172 >gi|296118467|ref|ZP_06837045.1| conserved hypothetical protein [Corynebacterium ammoniagenes DSM 20306] gi|295968366|gb|EFG81613.1| conserved hypothetical protein [Corynebacterium ammoniagenes DSM 20306] Length = 444 Score = 60.5 bits (146), Expect = 9e-08, Method: Composition-based stats. Identities = 35/172 (20%), Positives = 63/172 (36%), Gaps = 29/172 (16%) Query: 6 EKIALFIDGANL---YASSKALG----FDIDYRKLLKAFRS------RAIVIRAYYYTTV 52 E+ +F+D + L + +S +G +ID +++ RS V R +Y + Sbjct: 3 ERTVVFVDTSYLLASFYNSWEIGARGQLEIDLPEVVATLRSMIENQIGHPVHRQNWYDGI 62 Query: 53 VGDPEQQFSPLHPLLDWLHY-NGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS- 110 + H L +G Q+ E+ G +R + ++D L D + Sbjct: 63 PD------TGPHRYQRALRTCDGVQLRTGQLIEW----GERRTQKAVDTRLVADMVVTAM 112 Query: 111 -EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161 + V+ SGD V+ +V + SM+S LR D Sbjct: 113 NQHFTDFVLVSGDADMIPGVSEATNNGMRVHLYGF--GWDSMSS-ALRHACD 161 >gi|298708071|emb|CBJ30424.1| conserved unknown protein [Ectocarpus siliculosus] Length = 825 Score = 60.5 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 28/170 (16%), Positives = 59/170 (34%), Gaps = 42/170 (24%) Query: 7 KIALFIDGANLYAS--SKALGFDI----------DYRKLLKAF----------------- 37 K+ +FIDG LY S + + +Y + Sbjct: 188 KVMVFIDGTWLYYSFFGRGERCHVSAKLGPGWVYEYNVKWEMLPVIISRAVHAQLARYGQ 247 Query: 38 -RSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKS 96 V+R +++ D ++ + + + + F+V E C Sbjct: 248 SSRLVEVVRTVVFSSARKDTDKDSTRMRMF-NAMREKNFEVHMATTVGVQEKC------- 299 Query: 97 SMDVELAVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVS 143 +D+ LAV+ + + + V+ +GD F +A ++K ++V + S Sbjct: 300 -IDIALAVEMMHYATIPDTYDVGVLVTGDKDFMPAMARTRQKGRRVCLCS 348 >gi|134045586|ref|YP_001097072.1| hypothetical protein MmarC5_0543 [Methanococcus maripaludis C5] gi|132663211|gb|ABO34857.1| protein of unknown function DUF88 [Methanococcus maripaludis C5] Length = 193 Score = 60.5 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 31/158 (19%), Positives = 56/158 (35%), Gaps = 32/158 (20%) Query: 9 ALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLD 68 AL IDG N+ F++D K+ A ++ Y L++ Sbjct: 2 ALLIDGPNM----LRKEFNVDLDKVRDALEQFGDIVVGRVYLNQYASD--------KLIE 49 Query: 69 WLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFT 126 + GF+ +DVE+AVD E + L+ LV + D F Sbjct: 50 AIANQGFEPRI--------------SAGDVDVEMAVDGTELIFNKNLDTLVYMTRDADFL 95 Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 + + + K++ +V S ++ AD+ + Sbjct: 96 PAIRKAKERGKQIIVVGAEPGF----STAIQNIADHVI 129 >gi|251772713|gb|EES53276.1| protein of unknown function DUF88 [Leptospirillum ferrodiazotrophum] Length = 307 Score = 60.5 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 24/121 (19%), Positives = 47/121 (38%), Gaps = 7/121 (5%) Query: 55 DPEQQFSPLHPL--LDWLHYNGFQVV--AKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110 D Q+ S + L ++V + + G + +D+ + +D + Sbjct: 128 DEIQKRSSFLEFKYVGQLVLRPYRVREMQRDKEGGILYQGTVEGEKGVDIGITIDMIAKM 187 Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMA---SDQLRRQADYFMDLA 167 + VI SGD F L+ L+ ++K V +S ++ S Q++ DYF + Sbjct: 188 PHYDAAVIVSGDTDFIPLIQYLKDQLKLVYSLSLSRTENGQVQIFSPQIKSAVDYFHAIP 247 Query: 168 Y 168 Sbjct: 248 E 248 >gi|327480971|gb|AEA84281.1| conserved hypothetical protein [Pseudomonas stutzeri DSM 4166] Length = 220 Score = 60.5 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 9/81 (11%) Query: 99 DVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156 D+ LA+DA E + + + D F L L+ + V IV D L Sbjct: 30 DIALALDAMEALFDHRADTFCLVTSDSDFAYLCRKLRERGATVCIVG-----EPKTPDAL 84 Query: 157 RRQADYFMDLAYLKNEIARDP 177 R +D F + + + E ++P Sbjct: 85 RNASDQFFE--WRREEHFQEP 103 >gi|320101761|ref|YP_004177352.1| hypothetical protein Isop_0206 [Isosphaera pallida ATCC 43644] gi|319749043|gb|ADV60803.1| hypothetical protein Isop_0206 [Isosphaera pallida ATCC 43644] Length = 493 Score = 60.5 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 41/167 (24%), Positives = 70/167 (41%), Gaps = 19/167 (11%) Query: 8 IALFIDGANL---YASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 A+F D NL Y S+ L ++ ++L++ R+ + + + + + L Sbjct: 6 TAIFYDLENLLKGYNFSQQLLTNLSLVEILESIRATNRLGKVALQRAYANWSDPRLASLR 65 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSG 121 ++ L + QV R K++ D+++A+DA + + GLE VI SG Sbjct: 66 GEVNDLGIDPIQVF---------GFARDSRKNAADIQMAIDAIDLAHTRPGLEIFVIVSG 116 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 DG F+ L L K V + S A+ R D F+ LA Sbjct: 117 DGGFSALARKLHEYGKTV----IGCAYQSAANRTFRAVCDEFVWLAD 159 >gi|307322651|ref|ZP_07601984.1| protein of unknown function DUF88 [Sinorhizobium meliloti AK83] gi|306891697|gb|EFN22550.1| protein of unknown function DUF88 [Sinorhizobium meliloti AK83] Length = 193 Score = 60.1 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 46/167 (27%), Positives = 77/167 (46%), Gaps = 8/167 (4%) Query: 10 LF-IDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLD 68 +F IDG++ L D L + A + A YY V + E+ L Sbjct: 21 IFLIDGSHYDRLRSVLESPFDLSALAHIASNGAPLDHAIYYRDVRDESEEA--RQRSLFG 78 Query: 69 WLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTL 128 WL +NGF V + + R+R +++ VELAVDA + + ++I + D L Sbjct: 79 WLKHNGFMVK---GRRHSSGEPRERYGTNL-VELAVDALLLAHSGDRVLILAADAKLAPL 134 Query: 129 VAALQRKVKKVTIVSTVLSDPSMA-SDQLRRQADYFMDLAYLKNEIA 174 +AAL+ VT++ST + ++A + L A+ F++L + IA Sbjct: 135 LAALRDDDIDVTLISTEDAPNTIAPARHLIENANRFLELKSVLEWIA 181 >gi|152983068|ref|YP_001352700.1| hypothetical protein mma_1010 [Janthinobacterium sp. Marseille] gi|151283145|gb|ABR91555.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 236 Score = 60.1 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 28/169 (16%), Positives = 51/169 (30%), Gaps = 40/169 (23%) Query: 4 PREKIALFIDGAN-----LYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ 58 +++A+ +D N L + L+ V+ Y Sbjct: 7 QNDRVAVLVDCDNTSPEILEYA-------------LRVVAQFGRVVVRRGY-------GN 46 Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHL 116 + + + L F ++ G+ D+ LA+DA E + Sbjct: 47 HATLANKWQEALVRLAFT----PCLQYQYAAGKNTS----DIALALDALEDLFDHRADTY 98 Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165 + + D F L L+ + V IV D LR +D F + Sbjct: 99 CLVTSDSDFAYLCRKLRERGATVCIVGEEK-----TPDALRNASDQFFE 142 >gi|154148166|ref|YP_001406735.1| hypothetical protein CHAB381_1180 [Campylobacter hominis ATCC BAA-381] gi|153804175|gb|ABS51182.1| protein containing DUF88 [Campylobacter hominis ATCC BAA-381] Length = 259 Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 57/175 (32%), Gaps = 39/175 (22%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 EK A+FID N+ K +I Y PE ++ Sbjct: 2 NEKYAIFIDAENVSY---------------KYINKVFELINVY--------PEPAIRRIY 38 Query: 65 PLLDWLHYNGFQ-----VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLE--HLV 117 + G++ K ++F G K++ D+ L +D E + + + Sbjct: 39 GDFSSQNLLGYKDEILSHALKPVQQFHSPNG----KNAADIALVIDIMEILNNTDIKNFI 94 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 I S DG F +L ++ K V + + + D F L + E Sbjct: 95 IVSSDGDFASLAIKIREKGGFVIGIGENKTQ-----INFIKACDEFFYLNEPEPE 144 >gi|295084937|emb|CBK66460.1| Uncharacterized conserved protein [Bacteroides xylanisolvens XB1A] Length = 207 Score = 59.8 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 26/174 (14%), Positives = 57/174 (32%), Gaps = 19/174 (10%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDY-----RKLLKAFRSRAIVIRAYYYTTVVGDPE 57 + ++K+ +++DG N Y K+ + + Y +S ++ Y++ D Sbjct: 2 EDKKKVIVYVDGFNFYYGLKSKKWKMCYWLDLVSFFNSFLKSYQELVEVNYFSARPTDAG 61 Query: 58 QQFSPLHPLLDWLHYNGFQVVA-----KVAK-EFTENCGRKRVKSSMDVELAVDAFEQS- 110 + F ++ K K + + DV +A + Sbjct: 62 KHDRQDKLFQANKCNPKFNLILGKYLKKEIKCRYCGGIIHSFEEKETDVRIATKILSDAY 121 Query: 111 -EGLEHLVIFSGDGCFTTLVAALQRKV--KKVTIVSTVLSDPSMASDQLRRQAD 161 + + +I S D V ++ +KV + P+ S L +D Sbjct: 122 KKRCDIAIIVSADSDLIPPVELIREFNPLQKVYV----YFPPNRYSSNLSNLSD 171 >gi|332524909|ref|ZP_08401095.1| hypothetical protein RBXJA2T_03833 [Rubrivivax benzoatilyticus JA2] gi|332108204|gb|EGJ09428.1| hypothetical protein RBXJA2T_03833 [Rubrivivax benzoatilyticus JA2] Length = 263 Score = 59.8 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 27/166 (16%), Positives = 49/166 (29%), Gaps = 40/166 (24%) Query: 7 KIALFIDGAN-----LYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 ++A+ +D N L + L+ V+ + + Sbjct: 11 RVAVLVDCDNTTPEVLEHA-------------LRVVAQFGRVV-------LRRGYGNHTT 50 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIF 119 + D L F ++ G+ D+ LA+DA E + + Sbjct: 51 LANRWQDALVRLAFT----PCLQYQYAAGKNTS----DIALALDAIEALFDRRADTFCLV 102 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165 + D F L L+ + V IV LR +D F + Sbjct: 103 TSDSDFAYLCRKLRERGATVHIVGESK-----TPAALRNASDQFFE 143 >gi|254225637|ref|ZP_04919245.1| protein of unknown function [Vibrio cholerae V51] gi|125621852|gb|EAZ50178.1| protein of unknown function [Vibrio cholerae V51] Length = 259 Score = 59.8 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 36/172 (20%), Positives = 63/172 (36%), Gaps = 29/172 (16%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 + +KIA+ ID N + +DY +LK ++ Y D + + Sbjct: 5 NSEKKIAVLIDAENAQYAV------LDY--VLKELSKHGHILVKKAYADWSSDCLKNWKQ 56 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 L+ L N ++F+ G K+S D + +DA + S+ + + S Sbjct: 57 P---LNELAIN-------PIQQFSYTQG----KNSSDAAMIIDAMDLLYSDKYDAFALIS 102 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 D FT L + L K+ I + + R D F+ LK+ Sbjct: 103 SDSDFTKLASRL----KESEIYVFGVGEKK-TPIAFRNACDDFIYTEVLKDR 149 >gi|332703414|ref|ZP_08423502.1| protein of unknown function DUF88 [Desulfovibrio africanus str. Walvis Bay] gi|332553563|gb|EGJ50607.1| protein of unknown function DUF88 [Desulfovibrio africanus str. Walvis Bay] Length = 179 Score = 59.8 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 28/186 (15%), Positives = 60/186 (32%), Gaps = 22/186 (11%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 +++ +DG+ L + K DY KL +Y + + Sbjct: 1 MNEKRVIWIVDGSYLLKAPKG---KFDYLKLKDTLEDLNGCP--FYESYFLDSTLDPSDA 55 Query: 63 LHPLLDWLHYNG----------FQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG 112 + WL ++V + + V+ +DV + + Sbjct: 56 QNAFYTWLKTAPPKGPKMRVRLYKVKTLSFRCPNGEYVERHVQKGVDVGITTLLIRLATQ 115 Query: 113 --LEHLVIFSGDGCFTTLVAALQR-KVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 + LV+ +GDG F ++ ++ K+ + + S L+ AD + L Sbjct: 116 GMYDRLVLSTGDGDFEDAISYIKEDLHKEFWLAGFTDT----ISADLQCYADRVVWLDDH 171 Query: 170 KNEIAR 175 +I + Sbjct: 172 WEKIRK 177 >gi|121594076|ref|YP_985972.1| hypothetical protein Ajs_1706 [Acidovorax sp. JS42] gi|120606156|gb|ABM41896.1| protein of unknown function DUF88 [Acidovorax sp. JS42] Length = 507 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 36/198 (18%), Positives = 70/198 (35%), Gaps = 39/198 (19%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP- 62 PR K ALF+D N+++ + L D F S+ ++ + P + Sbjct: 12 PRMKSALFVDFDNVFSGLRRL----DPIA-ADHFASQPQSWM-HWIAQSLEPPPHATAGA 65 Query: 63 --------------LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELA---VD 105 + GF+++ A K+S D+ + VD Sbjct: 66 RRLLVRRCYLNPQVYQRFRPAFNRAGFEIIDCPAM-------TSGGKTSTDIHMVLDIVD 118 Query: 106 AFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTI--VSTVLSDPSMASDQLRRQADYF 163 + + ++ S D FT ++ L+R ++ T+ + + ++D L Q D F Sbjct: 119 LLQHQVHYDEFIVLSADADFTPVLRKLRRWDRRTTVLAIGFPSAAYQASADLLIDQ-DAF 177 Query: 164 MDLAYLKNEIARDPDEDK 181 L+ + R+ E Sbjct: 178 -----LREALRREETETP 190 >gi|227505072|ref|ZP_03935121.1| conserved hypothetical protein [Corynebacterium striatum ATCC 6940] gi|227198337|gb|EEI78385.1| conserved hypothetical protein [Corynebacterium striatum ATCC 6940] Length = 419 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 32/172 (18%), Positives = 60/172 (34%), Gaps = 29/172 (16%) Query: 6 EKIALFIDGANL---YA----SSKALGFDIDYRKLLKAFRS------RAIVIRAYYYTTV 52 E+ +F+D + L + + +ID +++ S + R Y+Y + Sbjct: 3 ERTLVFVDTSYLLASFYNSWETGARAQLEIDLPEVVNNLGSMVENQLGNRIHRQYWYDGI 62 Query: 53 VGDPEQQFSPLHPLLDWLHY-NGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS- 110 + H L +G Q+ E+ G +R + ++D L D + Sbjct: 63 PD------TGPHRYQRALRTCDGVQLRTGQLIEW----GERRTQKAVDTRLVADMILAAM 112 Query: 111 -EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161 + + V+ SGD V +V + SM+S LR D Sbjct: 113 KQQVTDFVLVSGDADMIPGVQEAVNAGVRVHLYGF--GWDSMSS-ALRHACD 161 >gi|67921187|ref|ZP_00514706.1| hypothetical protein CwatDRAFT_5542 [Crocosphaera watsonii WH 8501] gi|67857304|gb|EAM52544.1| hypothetical protein CwatDRAFT_5542 [Crocosphaera watsonii WH 8501] Length = 76 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 16/36 (44%), Positives = 26/36 (72%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKA 36 + + R ++A+FIDG+NL+ ++ LG +IDY KLL Sbjct: 41 VLENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCR 76 >gi|298292631|ref|YP_003694570.1| hypothetical protein Snov_2657 [Starkeya novella DSM 506] gi|296929142|gb|ADH89951.1| protein of unknown function DUF88 [Starkeya novella DSM 506] Length = 208 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 36/188 (19%), Positives = 73/188 (38%), Gaps = 13/188 (6%) Query: 7 KIALFIDGANLYASSKALG----FDIDYRKLLK-AFRSRAIVIRAYYYTTVVGDPEQQFS 61 ++A ++DG NLY + ALG ++ R L + +++R ++T + Sbjct: 2 RVACYVDGFNLYHAVDALGDARLKWLNLRSLAESYLAPDDVLVRTVFFTAFNTWEHAKRQ 61 Query: 62 PLHPLLDWLHYNGFQVVA----KVAKE--FTENCGRKRVKSSMDVELAVDAFE--QSEGL 113 + L G +VV KV K E + R + DV +A++ G+ Sbjct: 62 RHVNYVKALGATGVEVVLSRFDKVHKHCFTHERFCKLREEKQTDVAIAIEVMSDCYERGI 121 Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 E +++ + D +V ++ + + I A+ +L + +L + Sbjct: 122 ERVLLITADSDQVPMVRRIRDRFPETIIFMIAPPKRLNAARELGQACSGVAELTAGRLRQ 181 Query: 174 ARDPDEDK 181 PDE + Sbjct: 182 HALPDELR 189 >gi|298479635|ref|ZP_06997835.1| conserved hypothetical protein [Bacteroides sp. D22] gi|298274025|gb|EFI15586.1| conserved hypothetical protein [Bacteroides sp. D22] Length = 207 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 28/174 (16%), Positives = 59/174 (33%), Gaps = 19/174 (10%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDY-RKLLKAFRS----RAIVIRAYYYTTVVGDPE 57 + ++K+ +++DG N Y K+ + + Y L+ F S ++ Y++ D Sbjct: 2 EDKKKVIVYVDGFNFYYGLKSKKWKMCYWLDLVSFFNSFLKPYQELVEVNYFSARPTDAG 61 Query: 58 QQFSPLHPLLDWLHYNGFQVVA-----KVAK-EFTENCGRKRVKSSMDVELAVDAFEQS- 110 + F ++ K K + + DV +A + Sbjct: 62 KHDRQDKLFQANKCNPKFNLILGKYLKKEIKCRYCGGIIHSFEEKETDVRIATKILSDAY 121 Query: 111 -EGLEHLVIFSGDGCFTTLVAALQRKV--KKVTIVSTVLSDPSMASDQLRRQAD 161 + + +I S D V ++ +KV + P+ S L +D Sbjct: 122 KKRCDIAIIVSADSDLIPPVELIREFNPLQKVYV----YFPPNRYSSNLSNLSD 171 >gi|269956699|ref|YP_003326488.1| hypothetical protein Xcel_1911 [Xylanimonas cellulosilytica DSM 15894] gi|269305380|gb|ACZ30930.1| protein of unknown function DUF88 [Xylanimonas cellulosilytica DSM 15894] Length = 484 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 35/174 (20%), Positives = 66/174 (37%), Gaps = 30/174 (17%) Query: 7 KIALFIDGANLYASS--------KALGFDIDYRKLLKAFRSRAI------VIRAYYYTTV 52 + ++FID L AS+ G +++ KL++ R +A V+R Y+Y + Sbjct: 4 RCSVFIDAGYLLASAATRVTGTSLRSGIHVEFSKLIEGIRRQAEQVSGLPVLRVYWYDSA 63 Query: 53 VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG 112 L +V ++ + + + +D+ L +D + Sbjct: 64 RNAVPDAQQQRIGELP-------RVKLRLGRFGIDG-----QQKGVDLRLGLDLVTHARN 111 Query: 113 --LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS--MASDQLRRQADY 162 E ++ SGD FT V Q +V +++ + S S L+R AD Sbjct: 112 QAAEVFLLVSGDDDFTEAVEEAQVHGVEVILLAAPDAHGSAHAVSRHLQRAADE 165 >gi|332667285|ref|YP_004450073.1| hypothetical protein Halhy_5375 [Haliscomenobacter hydrossis DSM 1100] gi|332336099|gb|AEE53200.1| protein of unknown function DUF88 [Haliscomenobacter hydrossis DSM 1100] Length = 315 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 38/157 (24%), Positives = 58/157 (36%), Gaps = 28/157 (17%) Query: 7 KIALFIDG------ANLYASSKALGFDIDYRKLLKAFRS-----------RAIVIRAYYY 49 +I +F DG +N Y I R L R R +I A+Y+ Sbjct: 13 RIGVFYDGHYFLQVSNYYNYVHDRRSRISIRGLHDFVRKQVAIEEDEEFHRCQIIDAHYF 72 Query: 50 TTVVGDPEQQFS-----PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAV 104 + E D L G V + F GR + K +DV LA+ Sbjct: 73 RGRLSASEASQRGNLLYFERAFDDILMSEGVSVHYLPVRNF---HGRWQEKG-IDVWLAL 128 Query: 105 DAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKV 139 +AFE + + + +VI + DG ++ LV L +V Sbjct: 129 EAFEMTFYKRFDVVVILAADGDYSPLVRKLHSLGSRV 165 >gi|150400659|ref|YP_001324425.1| hypothetical protein Maeo_0221 [Methanococcus aeolicus Nankai-3] gi|150013362|gb|ABR55813.1| protein of unknown function DUF88 [Methanococcus aeolicus Nankai-3] Length = 193 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 57/166 (34%), Gaps = 32/166 (19%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 ++AL IDG N+ F+ID K+ + V+ Y Sbjct: 21 NNRMALLIDGPNM----LRKEFNIDLDKIREVLDEFGSVVVGRVYLNQYASD-------- 68 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGD 122 L++ + G++ +DVE+AVD E + ++ ++ + D Sbjct: 69 KLIEAIANQGYEPKV--------------SAGDVDVEMAVDGTELIFNDTIDTIIYMTRD 114 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F + + K + I+ S ++ ADY + + Sbjct: 115 ADFLPAIRKAKEHGKNIIIIGAEPGF----STAIQNIADYVIKIED 156 >gi|325001928|ref|ZP_08123040.1| hypothetical protein PseP1_24341 [Pseudonocardia sp. P1] Length = 148 Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 40/166 (24%), Positives = 61/166 (36%), Gaps = 23/166 (13%) Query: 1 MFDPREKIALFIDGANLYASSK-ALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ 58 M E+IAL +D NL ++ LG D+ + A R V+ Y E Sbjct: 1 MAHEDERIALLLDYENLAIGARDGLGVVPFDFGPVADALAERGRVVVRRAYADWSAFDED 60 Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEH 115 + + E + G K++ D++LAVDA E + E + Sbjct: 61 RRLMARAQV-------------ELIEIPQRIG-GSRKNAADIKLAVDAIELAYEREFVTT 106 Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161 I +GD FT L+ L+ K+V + S S L D Sbjct: 107 FAIATGDSDFTPLMHKLRELDKRV----IGIGVQSSTSALLPPACD 148 >gi|331746820|ref|YP_004422857.1| hypothetical protein TERMP_02242 [Thermococcus barophilus MP] gi|315185031|gb|ADT85215.1| hypothetical protein TERMP_02242 [Thermococcus barophilus MP] Length = 182 Score = 59.0 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 34/152 (22%), Positives = 51/152 (33%), Gaps = 21/152 (13%) Query: 7 KIALFIDGANLYASSK-------ALGFDIDYRKLLKAFRS-RAIVIRAYYYTTVVGDPEQ 58 K A+ IDG N+ + L DI+++K K S V A Y Sbjct: 2 KAAVLIDGENVVMCLRDVVGGKVHLDKDINWKKFFKYLESLDYEVTIARIYA-----NPF 56 Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEH 115 F + + L G +VV KS+ D + VD ++ Sbjct: 57 IFLKNPHIANNLEKMGIKVVLAD-----STMKENGPKSTTDATMIVDGISILYERPAIDA 111 Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLS 147 +VI SGD F L + + V + S Sbjct: 112 IVIVSGDRDFLPLAEKAKELGRTVLFAAFPDS 143 >gi|172039786|ref|YP_001799500.1| hypothetical protein cur_0106 [Corynebacterium urealyticum DSM 7109] gi|171851090|emb|CAQ04066.1| hypothetical protein cu0106 [Corynebacterium urealyticum DSM 7109] Length = 513 Score = 59.0 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 31/172 (18%), Positives = 60/172 (34%), Gaps = 29/172 (16%) Query: 6 EKIALFIDGANL---YA----SSKALGFDIDYRKLLKAFRS------RAIVIRAYYYTTV 52 E+ +F+D + L + + +ID +++ + + R ++Y + Sbjct: 3 ERTQIFVDTSYLLASFYNSWETGARAQLEIDLPEVVCTLGRIAQDQLKQPIHRQFWYDGI 62 Query: 53 VGDPEQQFSPLHPLLDWLHYN-GFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE 111 S H L G Q+ + E+ + R+ K+ +D L D + Sbjct: 63 PE------SGPHRYQRSLRSEPGVQLRSGQLIEWGD---RRTQKA-VDTRLVADMVLAAV 112 Query: 112 G--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161 + +V+ SGD V +V + SM+S LR D Sbjct: 113 RGNVSDIVLVSGDADMLPGVEEAVDAGIRVHLYGF--GWDSMSSQ-LRFACD 161 >gi|298531231|ref|ZP_07018631.1| conserved hypothetical protein [Desulfonatronospira thiodismutans ASO3-1] gi|298508841|gb|EFI32747.1| conserved hypothetical protein [Desulfonatronospira thiodismutans ASO3-1] Length = 214 Score = 58.6 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 33/153 (21%), Positives = 52/153 (33%), Gaps = 26/153 (16%) Query: 3 DPREKIALFIDGANLYASSKALGFDI-------DYRKL----LKAF---RSRAIVIRAYY 48 P +KI +DG NLY S + G + D + L + F + + YY Sbjct: 1 MPTKKITYLVDGFNLYHSVRKAGKQLKASTKWLDLKSLCISMIHNFKPKADKLELENIYY 60 Query: 49 ---YTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAK------EFTENCGRKRVKSSMD 99 Y + DP+ L+ L G +V K F K + D Sbjct: 61 FSAYAYHLNDPD-MVQRHKSLVACLEDTGVKVEINRFKYKAIDCPFCNKTIPKYEEKETD 119 Query: 100 VELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVA 130 V +A+ E + + ++ SGD V Sbjct: 120 VSIALKLQEIFIKDECDVAILVSGDTDLAPAVR 152 >gi|227834252|ref|YP_002835959.1| hypothetical protein cauri_2430 [Corynebacterium aurimucosum ATCC 700975] gi|227455268|gb|ACP34021.1| hypothetical protein cauri_2430 [Corynebacterium aurimucosum ATCC 700975] Length = 405 Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 31/171 (18%), Positives = 59/171 (34%), Gaps = 27/171 (15%) Query: 6 EKIALFIDGANL---YA----SSKALGFDIDYRKLLKAFRS------RAIVIRAYYYTTV 52 E+ +F+D + L + + +ID +++ + S + R Y+Y + Sbjct: 3 ERTLVFVDTSYLLASFYNSWETGARAQLEIDLPEVVSSLGSMIENQVGNRIHRQYWYDGI 62 Query: 53 VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAF--EQS 110 ++ + D G Q+ E+ G +R + ++D L D Sbjct: 63 PDTGPHRYQRALRVCD-----GVQLRTGQLIEW----GERRTQKAVDTRLVADMIVSAMK 113 Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161 + V+ SGD V +V + SM+S LR D Sbjct: 114 GQVTDFVLVSGDADMIPGVQEAVNNGVRVHLYGF--GWDSMSS-ALRHACD 161 >gi|271961974|ref|YP_003336170.1| hypothetical protein Sros_0396 [Streptosporangium roseum DSM 43021] gi|270505149|gb|ACZ83427.1| hypothetical protein Sros_0396 [Streptosporangium roseum DSM 43021] Length = 393 Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 36/191 (18%), Positives = 72/191 (37%), Gaps = 37/191 (19%) Query: 5 REKIALFIDGANL-------YASSK---ALGFDIDYRKLLKAF------RSRAIVIRAYY 48 ++ ALF+D L ++ A+ + DY LLK R+ ++R Y+ Sbjct: 1 MDRCALFVDAGYLLADGAMAVHGTRHREAVSW--DYPGLLKLLGNLSKERTGLPLLRCYW 58 Query: 49 YTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE 108 Y V D L + ++++ GR+ +D ++ D Sbjct: 59 YEASVEGRRTAE------HDALADLP-GLKLRLSRIRP---GRRE---GVDAQVHRDLMT 105 Query: 109 QSEG---LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165 + + V+ SGD +V Q +VT+V S LR++ D ++ Sbjct: 106 LARNSAVCD-AVVVSGDEDLAQVVCDAQDLGIRVTVVHITADGSWAVSRSLRQECDDLIE 164 Query: 166 L--AYLKNEIA 174 + ++L+ ++ Sbjct: 165 IGSSHLRPYVS 175 >gi|296126610|ref|YP_003633862.1| hypothetical protein Bmur_1576 [Brachyspira murdochii DSM 12563] gi|296018426|gb|ADG71663.1| conserved hypothetical protein [Brachyspira murdochii DSM 12563] Length = 209 Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 36/192 (18%), Positives = 73/192 (38%), Gaps = 28/192 (14%) Query: 5 REKIALFIDGANLYASSKALGFD----IDYRKLLKAFRSRAIVIR-AYYYTTVVGDPEQQ 59 +K+ +IDG N+Y + L + I+Y L K+ +I YY++ Sbjct: 1 MDKVNFYIDGFNIYHAIDRLNNNKLKWINYYDLCKSLLKDNEIINKVYYFSAYAFWKPYS 60 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCG-------------RKRVKSSMDVELAVDA 106 + + + L Y +VV K+ ++N + DV +A+ Sbjct: 61 QNNHYIFIQALKYFNVEVVLGNFKKKSKNLIINDNNGNIIKYNYEYHEEKESDVNIAIYL 120 Query: 107 FEQS--EGLEHLVIFSGDGCFTTLVAALQRKVK--KVTIVSTVLSDPSMASDQLRRQADY 162 + + ++ SGD + + + KV +V P++ + L+ +D Sbjct: 121 VRDACKRNCDKAILLSGDSDLVPAIKMAKEENADLKVGVV----VPPNVQASSLKNISD- 175 Query: 163 FMDLAYLKNEIA 174 D+ LK +I+ Sbjct: 176 -FDIKLLKIDIS 186 >gi|220919728|ref|YP_002495031.1| hypothetical protein Mnod_8422 [Methylobacterium nodulans ORS 2060] gi|219952148|gb|ACL62539.1| conserved hypothetical protein [Methylobacterium nodulans ORS 2060] Length = 204 Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 26/150 (17%), Positives = 52/150 (34%), Gaps = 19/150 (12%) Query: 5 REKIALFIDGANLYASSKALGF-DIDYRKLLKAFRS----RAIVIRAYYYTTVVGDPEQQ 59 ++ ++DG NLY + L + + L + +S +I ++T Sbjct: 1 MRRVIAYVDGFNLYHAIDDLQKPHLKWLDLWQLAQSICGTGETLIEVNFFTAYPTWKPGP 60 Query: 60 FSPLHPLLDWLHYNG-------FQVVAKVAKEFTENCGRKRVKSSMDVELAV----DAFE 108 + L + G F+ + K G + DV +AV DAF Sbjct: 61 MKRHQVYVKALRHAGVNCVIGHFKTKQRECK-RCGAQGDVHEEKETDVAIAVQITTDAFL 119 Query: 109 QSEGLEHLVIFSGDGCFTTLVAALQRKVKK 138 +G + +I S D + +++ + Sbjct: 120 --DGYDRALIISADSDLAPALRTVRQHFPR 147 >gi|78189973|ref|YP_380311.1| hypothetical protein Cag_2020 [Chlorobium chlorochromatii CaD3] gi|78172172|gb|ABB29268.1| hypothetical protein Cag_2020 [Chlorobium chlorochromatii CaD3] Length = 212 Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 28/154 (18%), Positives = 56/154 (36%), Gaps = 24/154 (15%) Query: 5 REKIALFIDGANLYA---SSKALGFD-----IDYRKL----LKAFRSRAIVIRAYYYTTV 52 ++ +DG NLY +++A+ +D L L F A++ + +Y + + Sbjct: 1 MNRVVFIVDGFNLYHSLKAAQAVQRPASTKWLDLCSLFSSQLYHFGKDAVLHKVFYISAL 60 Query: 53 V----GDPEQQFSPLHPLLDWLHYNGFQVVAKVAK------EFTENCGRKRVKSSMDVEL 102 + L NG + K + + K + DV L Sbjct: 61 AVHLEASNPNLTKRHQAYIKCLQANGVITLLNRFKRKDVFCKLCKRSFYKYEEKETDVML 120 Query: 103 AVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQR 134 A FEQ ++ + +V+ +GD + + Q+ Sbjct: 121 ATTLFEQLATDNCDTVVLVTGDTDLAPAIRSGQK 154 >gi|94265587|ref|ZP_01289332.1| conserved hypothetical protein [delta proteobacterium MLMS-1] gi|93453916|gb|EAT04271.1| conserved hypothetical protein [delta proteobacterium MLMS-1] Length = 207 Score = 58.2 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 31/193 (16%), Positives = 75/193 (38%), Gaps = 30/193 (15%) Query: 7 KIALFIDGANLYASSKA---LGFDIDYRKLLKAFRS-RAIVIRAYYYTTVVGD--PEQQF 60 + +++IDG NLY + + +D R+++ + + Y+T +V Q Sbjct: 2 RTSVYIDGFNLYYRALKGTPHKW-LDLRQMVANLLQPHHQITQLKYFTAIVSGIFDPSQP 60 Query: 61 SPLHPLLDWLHYN--------G-------FQVVAKVAKEFTENCGRKRVKSSMDVELAVD 105 + + L ++ G F A + + + K + DV LA+ Sbjct: 61 NRQKSYIRALKHHIPNFSVHYGHFLSHEVFAPKAPLTRPPSFTRVIKTEEKGSDVNLAIH 120 Query: 106 AFEQS--EGLEHLVIFSGDGCFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADY 162 + + + ++ S D + ++ + K + ++S +L S +L++ A + Sbjct: 121 LLNDAWLDRYDCAIVISNDSDLVEPLRLVREQNGKVIGLISPLLRGHP--SRELQKHA-H 177 Query: 163 FMDLAYLKNEIAR 175 F+ ++ + R Sbjct: 178 FV--KRIREGVLR 188 >gi|332559892|ref|ZP_08414214.1| hypothetical protein RSWS8N_12555 [Rhodobacter sphaeroides WS8N] gi|332277604|gb|EGJ22919.1| hypothetical protein RSWS8N_12555 [Rhodobacter sphaeroides WS8N] Length = 265 Score = 57.8 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 36/180 (20%), Positives = 67/180 (37%), Gaps = 42/180 (23%) Query: 8 IALFIDGANL--YASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 +A+ ID NL +++ + + A R V+RAY + Sbjct: 4 VAVLIDADNLSGKHAAQIMQ--------VAAALGRPTVLRAYVHA-------------QR 42 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDG 123 DW +GF+++ K++ D+ LA+DA E + ++ VI S DG Sbjct: 43 PCDWHGVHGFRLM-----------HAGTGKNASDLLLALDAVELALRGDVDQFVIASSDG 91 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK-NEIARDPDEDKK 182 F+ L L+ VT V R F+++ + + + P ++ + Sbjct: 92 DFSHLALRLREYGALVTGVGEDK-----TPQTFRAACADFVEIGARRLASVPKPPSKEAQ 146 >gi|84515798|ref|ZP_01003159.1| hypothetical protein SKA53_14151 [Loktanella vestfoldensis SKA53] gi|84510240|gb|EAQ06696.1| hypothetical protein SKA53_14151 [Loktanella vestfoldensis SKA53] Length = 246 Score = 57.8 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 37/93 (39%), Gaps = 7/93 (7%) Query: 87 ENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVST 144 + R K++ D+ L +DA + S + V+ S D FT L L+ V ++ Sbjct: 65 QETANTRGKNASDIGLVIDAMDILHSGRFDGFVLVSSDSDFTALANRLRENG--VVVIGI 122 Query: 145 VLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 + LR + F+ + L ++ P Sbjct: 123 GEGKAPV---SLRNVCNRFILIENLVDQEKEQP 152 >gi|147920799|ref|YP_685395.1| hypothetical protein RCIX674 [uncultured methanogenic archaeon RC-I] gi|110620791|emb|CAJ36069.1| conserved hypothetical protein [uncultured methanogenic archaeon RC-I] Length = 190 Score = 57.8 bits (139), Expect = 6e-07, Method: Composition-based stats. Identities = 32/163 (19%), Positives = 61/163 (37%), Gaps = 34/163 (20%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIV-IRAYYYTTVVGDPEQQFSPL 63 R+ IAL +DG N+ F ID + + + + + D Sbjct: 32 RKGIALLVDGPNM----LRKEFQIDLEVVRDILKRYGDIKVGKVFLNQYASD-------- 79 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSG 121 L++ + GF+ + +DV LAVDA E + ++ + I + Sbjct: 80 -KLVEAIENQGFEPIV--------------GSGDVDVRLAVDAMELVFNQHIDTIAIVTR 124 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 D F +++ K+ + ++P + S L+ ADY + Sbjct: 125 DADFKPVLSKASMYGKETIVFG---AEPGL-SIALKNVADYVI 163 >gi|253565602|ref|ZP_04843057.1| cold-shock protein DNA-binding [Bacteroides sp. 3_2_5] gi|251945881|gb|EES86288.1| cold-shock protein DNA-binding [Bacteroides sp. 3_2_5] Length = 208 Score = 57.8 bits (139), Expect = 6e-07, Method: Composition-based stats. Identities = 35/190 (18%), Positives = 71/190 (37%), Gaps = 21/190 (11%) Query: 1 MFDPREKIALFIDGANLYASSKAL----GFDIDYRKLLKAFRSR-----------AIVIR 45 M + I +FIDG ++AL +ID K + + + Sbjct: 1 MIESITSIGIFIDGGYFTKINQALEEKLSLNIDITFFFKFIKEKIAYEYNLNTEFCQITE 60 Query: 46 AYY----YTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVE 101 ++Y Y + + D L N K +E + ++ +DV Sbjct: 61 SHYFRGRYRVNDANNKHLLFSERKFEDSLIENDVIFHYKHLREIQKEGEINVIEKGIDVW 120 Query: 102 LAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQ 159 A++A+E S + +++ +GD L+ L+ +++ LS S + LR + Sbjct: 121 FALEAYELSLFRKFDFVILITGDADHEMLIKKLKALKIHTILLTWDLSPESATARLLREE 180 Query: 160 ADYFMDLAYL 169 A ++L+ + Sbjct: 181 ACKHIELSEI 190 >gi|260432079|ref|ZP_05786050.1| protein containing DUF88 [Silicibacter lacuscaerulensis ITI-1157] gi|260415907|gb|EEX09166.1| protein containing DUF88 [Silicibacter lacuscaerulensis ITI-1157] Length = 238 Score = 57.4 bits (138), Expect = 7e-07, Method: Composition-based stats. Identities = 30/173 (17%), Positives = 61/173 (35%), Gaps = 34/173 (19%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRA---YYYTTVVGDPEQQFS 61 E++A+ ID N+ +K + + F A + A Y G Q +S Sbjct: 6 TERLAVLIDAENV--PAKH---------VAEIFEEVATLGEASLRRIYGDFSGGTPQGWS 54 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIF 119 + ++F G+ D+ L +DA + S + V+ Sbjct: 55 AEKLAEYAIV---------PHQQFANTTGKNAG----DIALVIDAMDILHSGRFDGFVLV 101 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 S D FT L + ++ + +V + + + + + F+ + +K E Sbjct: 102 SSDSDFTRLASRIREQGLRVYGIGERKTPKAFVA-----ACNRFILIENIKKE 149 >gi|282899804|ref|ZP_06307766.1| hypothetical protein CRC_01671 [Cylindrospermopsis raciborskii CS-505] gi|281195286|gb|EFA70221.1| hypothetical protein CRC_01671 [Cylindrospermopsis raciborskii CS-505] Length = 439 Score = 57.4 bits (138), Expect = 8e-07, Method: Composition-based stats. Identities = 40/173 (23%), Positives = 66/173 (38%), Gaps = 33/173 (19%) Query: 8 IALFIDGANLYASSKALGFDID----------YRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 A+F D NL +K F D YR++L+ + Y + Sbjct: 6 TAIFYDIENL---TKGYSFSKDFIKELSLKQIYRQILEVDIVN-KICLQRAYA---NWSD 58 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLE 114 + S L ++ L + Q+ R K++ D++L VD + + +E Sbjct: 59 HRLSLLRGEINELGIDPIQIF---------GFARYHKKNAADIQLVVDTMDITIRFPHIE 109 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 VI SGDG F +L L K+V + + A+D + DYF+ L Sbjct: 110 VYVIVSGDGGFASLAKKLHEYGKQV----IGCAYENSANDIFKSVCDYFIKLE 158 >gi|332527193|ref|ZP_08403265.1| hypothetical protein RBXJA2T_14776 [Rubrivivax benzoatilyticus JA2] gi|332111617|gb|EGJ11598.1| hypothetical protein RBXJA2T_14776 [Rubrivivax benzoatilyticus JA2] Length = 155 Score = 57.4 bits (138), Expect = 8e-07, Method: Composition-based stats. Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 6/89 (6%) Query: 95 KSSMDVELAVDAFEQSEGLEHLV--IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMA 152 K+S D+ +AVDA + L V I S D F LV L+ K +V L Sbjct: 67 KNSTDIAMAVDAIDLVLALRPAVVAIASSDSDFAPLVQRLREKGCRV----VGLGQDGKT 122 Query: 153 SDQLRRQADYFMDLAYLKNEIARDPDEDK 181 D+ D F L++ + +A P + Sbjct: 123 GDETISVYDEFTVLSHRRGGVATTPSRGR 151 >gi|293443850|ref|ZP_06662273.1| predicted protein [Escherichia coli B088] gi|291323775|gb|EFE63202.1| predicted protein [Escherichia coli B088] Length = 214 Score = 57.4 bits (138), Expect = 8e-07, Method: Composition-based stats. Identities = 28/179 (15%), Positives = 66/179 (36%), Gaps = 20/179 (11%) Query: 3 DPREKIALFIDGANLYASSK-----ALGFDIDYRKLLKAFRSRAIVI--RAYYYTTVVGD 55 P++++ FIDG NLY + + +D KL + S+ + ++++ Sbjct: 4 PPKKRVQCFIDGYNLYHAIDETRETKNHW-VDLWKLASKYISKNTCVLSDVFWFSAPPVH 62 Query: 56 PEQQFSPLH-PLLDWLHYNGFQVVAK--VAKEFTENCG-------RKRVKSSMDVELAVD 105 ++ LH L + G VV+ K + N G + + DV LA+ Sbjct: 63 LTKRKQELHANYSAALQHCGVSVVSGKFKLKRVSCNAGSGCGKSFDRHEEKESDVNLAIG 122 Query: 106 AFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADY 162 + + + ++ + D + ++ + + + ++ L+ A+ Sbjct: 123 LVSAACNDEFDIAIVITADSDLCPPIKYVRNRFPNKQVWILIPPKRRSRANDLKAIANR 181 >gi|302870557|ref|YP_003839194.1| hypothetical protein Micau_6123 [Micromonospora aurantiaca ATCC 27029] gi|302573416|gb|ADL49618.1| protein of unknown function DUF88 [Micromonospora aurantiaca ATCC 27029] Length = 441 Score = 57.4 bits (138), Expect = 9e-07, Method: Composition-based stats. Identities = 38/190 (20%), Positives = 65/190 (34%), Gaps = 35/190 (18%) Query: 7 KIALFIDGANLYASSKALGFDI------DY----RKL---------LKAFRSRAIVIRAY 47 + AL++D N+++ L D+ D R+L + R + A Sbjct: 5 RAALYLDFDNVFSGLYKLDPDVAVHFAEDPAGWLRRLATTATTDGARRWLVLRCYLNPAG 64 Query: 48 YYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVEL---AV 104 + EQ GF V+ + K++ D+ + AV Sbjct: 65 WVYRPDPGGEQTRLYFSKFRPSFVRAGFDVI--------DCPRYSSTKNAADIRIVVDAV 116 Query: 105 DAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 DA + VI SGD T L+ L+R ++ IVS + + + AD + Sbjct: 117 DALSADTRYDEFVIASGDSDMTPLLQRLRRSDRRTMIVSPADAAEAFTA-----IADQVL 171 Query: 165 DLAYLKNEIA 174 D L + Sbjct: 172 DSQQLLALVQ 181 >gi|84497148|ref|ZP_00995970.1| hypothetical protein JNB_13178 [Janibacter sp. HTCC2649] gi|84382036|gb|EAP97918.1| hypothetical protein JNB_13178 [Janibacter sp. HTCC2649] Length = 386 Score = 57.4 bits (138), Expect = 9e-07, Method: Composition-based stats. Identities = 34/171 (19%), Positives = 60/171 (35%), Gaps = 28/171 (16%) Query: 9 ALFIDGANLYASS--------KALGFDIDYRKLLKAFRSRAI------VIRAYYYTTVVG 54 A+++D L AS+ G ++DY L+ ++ ++R +Y + Sbjct: 6 AVYVDVGYLLASAATRVTGSSLRSGIEVDYPGLIAGLVAQVEADSGLPLLRVNWYDSGAR 65 Query: 55 DPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEG 112 Q G K+ G ++ +DV L +D Q + Sbjct: 66 SGGQPDYHQ-------DQIGLLPRIKLRLGRLSYAGEQK---GVDVRLGLDLALQGRARV 115 Query: 113 LEHLVIFSGDGCFTTLVAALQRKVKKVTIVST--VLSDPSMASDQLRRQAD 161 + + + SGD T V Q +V ++S + S LRR AD Sbjct: 116 ADVVYLVSGDDDLTEAVEEAQSAGVQVVLLSVPGLNGHGHAVSKHLRRAAD 166 >gi|322436968|ref|YP_004219180.1| hypothetical protein AciX9_3394 [Acidobacterium sp. MP5ACTX9] gi|321164695|gb|ADW70400.1| hypothetical protein AciX9_3394 [Acidobacterium sp. MP5ACTX9] Length = 275 Score = 57.1 bits (137), Expect = 9e-07, Method: Composition-based stats. Identities = 36/185 (19%), Positives = 66/185 (35%), Gaps = 36/185 (19%) Query: 5 REKIALFIDGANLY---------ASSKALGFDIDYRKLLKAFRS-------RAIVIRAYY 48 ++ A+F+D LY A++ +D +L+ +S A ++R Y+ Sbjct: 1 MQRNAVFVDAGYLYSQSAVSLTGANAARPSLRLDEAELINQLKSLALNLSAGAQLLRIYW 60 Query: 49 YTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE 108 Y D + L+ K + + +D L D + Sbjct: 61 Y-----DGAKNGMTAEQLVLA--------DMADVKVRLGSINSAGQQKGVDSLLVTDLID 107 Query: 109 QSEG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQ--LRRQADYFM 164 + + VI +GDG V Q +V +V +PS AS LR++AD Sbjct: 108 LARNQAISDAVIVTGDGDMRVAVQIAQSFGVRVHLVGL---EPSSASQSQLLRQEADTVH 164 Query: 165 DLAYL 169 ++ + Sbjct: 165 EIPKI 169 >gi|295836648|ref|ZP_06823581.1| conserved hypothetical protein [Streptomyces sp. SPB74] gi|295826135|gb|EFG64694.1| conserved hypothetical protein [Streptomyces sp. SPB74] Length = 310 Score = 57.1 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 41/193 (21%), Positives = 67/193 (34%), Gaps = 44/193 (22%) Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRS-------RAIVIRAYYYTTVV 53 A+F+D LYA++ L GFD+D + L+ A + ++R Y+Y Sbjct: 33 AIFVDAGYLYAAAGRLVAGTEDRKGFDLDAQGLIDALVDCASHVFPHSRLLRVYWY---D 89 Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112 G + + + L K N + +D + D + Sbjct: 90 GARRRIHTAEQQSIAELP---------DVKVRLGNLNANNQQKGVDSLIRGDIESLARHR 140 Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD---------Y 162 + V+ GD V A Q +V + + LR QAD Sbjct: 141 AIGDAVLLGGDEDLVPAVEAAQDFGARVHLWGIEAPEG------LRNQADPLLWEADAQR 194 Query: 163 FMDLAYLKNEIAR 175 +DLA+LK +AR Sbjct: 195 TLDLAFLKPYVAR 207 >gi|291298318|ref|YP_003509596.1| hypothetical protein Snas_0791 [Stackebrandtia nassauensis DSM 44728] gi|290567538|gb|ADD40503.1| protein of unknown function DUF88 [Stackebrandtia nassauensis DSM 44728] Length = 335 Score = 57.1 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 28/187 (14%), Positives = 66/187 (35%), Gaps = 32/187 (17%) Query: 7 KIALFIDGANLYASSKA--LG------FDIDYRKLLKAFRSR-------AIVIRAYYYTT 51 + A+ ID LYA++ LG + +D KL+ +R ++R Y++ Sbjct: 15 RYAMLIDVGYLYAAAAEVLLGATSRREYKVDAEKLINTLITRAADQLPGGELLRVYWF-- 72 Query: 52 VVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE 111 ++ + ++ + + K N + + +D + D + + Sbjct: 73 -DAARDRVPTVDQRVIAAMA---------LVKVRLGNLNSRGQQKGVDAMIRTDLEQLAR 122 Query: 112 G--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 + ++ +GD V Q +V + + +++L +AD L + Sbjct: 123 HGAISEAILLAGDEDMVPAVEIAQAYGVRVHVWGVEPPYGTNQAERLLWEADT---LDEI 179 Query: 170 KNEIARD 176 E + Sbjct: 180 SAEFCKP 186 >gi|302690852|ref|XP_003035105.1| hypothetical protein SCHCODRAFT_105532 [Schizophyllum commune H4-8] gi|300108801|gb|EFJ00203.1| hypothetical protein SCHCODRAFT_105532 [Schizophyllum commune H4-8] Length = 500 Score = 57.1 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 34/172 (19%), Positives = 64/172 (37%), Gaps = 24/172 (13%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGD--PEQ 58 MF EK+A+F D N ++ G+D+ + + + Y Sbjct: 1 MFRSSEKVAVFWDYENCAPPAQVSGYDV-VDTIRGIGHRYGAICQLKAYLEPPRQYVDPS 59 Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEH--- 115 + L L L +G + +C +K D + VD + L+H Sbjct: 60 GTARLLALRTELQASGVSLT---------DCPHNGMKEVADHMMQVDMLAFA--LDHPAP 108 Query: 116 --LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165 +++ +GD F A L+ + +V I+S + L+ QAD +++ Sbjct: 109 ATVILITGDRDFAYATAVLRARRYRVIILSL-----PHIHETLKAQADEWLE 155 >gi|171060518|ref|YP_001792867.1| hypothetical protein Lcho_3848 [Leptothrix cholodnii SP-6] gi|170777963|gb|ACB36102.1| protein of unknown function DUF88 [Leptothrix cholodnii SP-6] Length = 461 Score = 57.1 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 36/189 (19%), Positives = 68/189 (35%), Gaps = 28/189 (14%) Query: 7 KIALFIDGANLYASSKALGFDI--DYRK--------LLKAFRSRAIVIRAYYYTTVVGDP 56 K ALF+D N+Y+ + L I + + LL +V Sbjct: 2 KSALFVDFDNVYSGLRKLDPTIADRFSRQPLRWVEWLLDDLPPPEHAPDGARRRLLVRRV 61 Query: 57 EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GL 113 ++ GF+++ A K+S D+ + +D + + Sbjct: 62 YLNPQVYQRYRAAFNHAGFEIIDCPAM-------TSEGKTSTDIHMVLDMVDLLQHQVHY 114 Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTI--VSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 + ++FS D FT ++ L+R ++ T+ V + ++D L D F L++ Sbjct: 115 DEFIVFSADADFTPVLRKLRRWDRRTTVLAVGFPSAAYRASADLLID-TDLF-----LRD 168 Query: 172 EIARDPDED 180 I ED Sbjct: 169 AIGVREAED 177 >gi|284038322|ref|YP_003388252.1| hypothetical protein Slin_3445 [Spirosoma linguale DSM 74] gi|283817615|gb|ADB39453.1| protein of unknown function DUF88 [Spirosoma linguale DSM 74] Length = 338 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 31/161 (19%), Positives = 58/161 (36%), Gaps = 28/161 (17%) Query: 7 KIALFIDG------ANLYASSKALGFDIDYRKLLKAFRSR-----------AIVIRAYYY 49 +I +F DG +N Y S I L R + ++ A+Y+ Sbjct: 9 RIGVFYDGNYFLHVSNYYNYSHERRSRISISGLHAFIRRQVAEEEGVNERLCQIVDAHYF 68 Query: 50 TTVVGDPEQQFSPLHPLLDWLHYN-----GFQVVAKVAKEFTENCGRKRVKSSMDVELAV 104 + E D L + G K + R + +DV LA+ Sbjct: 69 RGRLNAHEANQRGNQLFYDRLFDDILMSEGVVTHYLPVKTYQG----YRQEKGIDVWLAL 124 Query: 105 DAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVS 143 +AFE ++ + +V+ + DG + L+ L ++ ++S Sbjct: 125 EAFELAQYKKFDVVVLITSDGDYVPLIRKLNTLGSRIMVLS 165 >gi|258510539|ref|YP_003183973.1| hypothetical protein Aaci_0532 [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257477265|gb|ACV57584.1| protein of unknown function DUF88 [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 321 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 36/171 (21%), Positives = 64/171 (37%), Gaps = 29/171 (16%) Query: 3 DPREKIALFIDGANLYASSKA-LGFDID--------YRKLLKAF-RSRAIVIRAYYYTTV 52 D + +A+F+D N+Y + D + KL + R + +AY Sbjct: 50 DKMDNVAIFVDYDNVYWTLYNNYRHHPDHGDDDKNLFVKLWDFYGRDNVRIFKAYA---- 105 Query: 53 VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS-- 110 D EQ S L L + ++ + + K++ D+EL++DA E + Sbjct: 106 --DFEQIKSDLTRLQ--------KRRVQIRHVYANGKTEQGRKNASDIELSIDAIELTHT 155 Query: 111 -EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160 + VI + D L++ L K K+V + + LR A Sbjct: 156 DPEITCYVIVTADSDMIPLMSRLMYKGKRVELFYIESALAKHT--DLRNYA 204 >gi|55378280|ref|YP_136130.1| hypothetical protein rrnAC1502 [Haloarcula marismortui ATCC 43049] gi|55231005|gb|AAV46424.1| unknown [Haloarcula marismortui ATCC 43049] Length = 148 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 32/160 (20%), Positives = 53/160 (33%), Gaps = 31/160 (19%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 D +++ LF+DG N+ FD+D ++ + Y + Sbjct: 12 DSPQRVGLFVDGPNV----LRSEFDVDLDEVRDIAAEYGPLAVTRLYV--------DQNA 59 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDA--FEQSEGLEHLVIFS 120 L+ GF+V +DV LAVDA + ++ L + S Sbjct: 60 SPGLIQAAEARGFEVRT--------------TSGDVDVRLAVDATNAAVAGQIDVLAVAS 105 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160 D F + R+ K ++ SD LR A Sbjct: 106 RDTDFKPALEVAAREGVKTVAIAPGEYGR---SDALRNAA 142 >gi|260775864|ref|ZP_05884760.1| hypothetical protein VIC_001249 [Vibrio coralliilyticus ATCC BAA-450] gi|260608280|gb|EEX34449.1| hypothetical protein VIC_001249 [Vibrio coralliilyticus ATCC BAA-450] Length = 290 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 67/185 (36%), Gaps = 34/185 (18%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 +KIA+ ID N S A +++ S ++ Y ++ Sbjct: 45 NKKIAVLIDSDNTPHSKLA--------AIIEELSSFGHIVVKRAY---GDFSSERLKNWK 93 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGD 122 L+ L A + + K++ D + +DA + S+ + + S D Sbjct: 94 QPLNEL-----------AIQAKQQFAYTSGKNATDSLMIIDAMDLLYSQRFDAFALISSD 142 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK-----NEIARDP 177 FT+L L+ ++ ++ +M + D F+ + L+ ++ R P Sbjct: 143 SDFTSLATRLRE--SEIHVIGV---GKAMTPSSFKNACDDFVAIENLQGATEVDDAQRRP 197 Query: 178 DEDKK 182 +++ + Sbjct: 198 NQNAE 202 >gi|225020005|ref|ZP_03709197.1| hypothetical protein CORMATOL_00001 [Corynebacterium matruchotii ATCC 33806] gi|224947140|gb|EEG28349.1| hypothetical protein CORMATOL_00001 [Corynebacterium matruchotii ATCC 33806] Length = 404 Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 40/191 (20%), Positives = 70/191 (36%), Gaps = 38/191 (19%) Query: 6 EKIALFIDGANL---YASSKALGF----DIDYRKLLKAFRS------RAIVIRAYYYTTV 52 E+ +F+D + L + +S +G +ID +++ + V R ++Y + Sbjct: 3 ERTQIFVDTSYLLASFYNSWEIGARAQLEIDLPAVVRTLGTMVTEQFEQPVHRQFWYDGI 62 Query: 53 VGDPEQQFSPLHPLLDWLHY-NGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE 111 + H L +G Q+ A E+ G +R + ++D L D S Sbjct: 63 PD------TGPHRYQRALRTCDGVQLRAGQLIEW----GERRTQKAVDTRLVADMVLTSV 112 Query: 112 G--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 + +V+ SGD V +V + SM+S LR D + L Sbjct: 113 RQEVTDIVLVSGDADMIPGVQEAVNHGIRVHLYGF--GWDSMSS-ALRHACDSLVIL--- 166 Query: 170 KNEIARDPDED 180 DP ED Sbjct: 167 ------DPRED 171 >gi|219128471|ref|XP_002184436.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217404237|gb|EEC44185.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 779 Score = 56.3 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 40/109 (36%), Gaps = 12/109 (11%) Query: 38 RSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSS 97 ++RA +T+ D D N + V R + Sbjct: 299 ARPMEIVRASVFTSYKADTPTSSFRYQMFQDMQAAN-YDVHMMETV--------GRGEKC 349 Query: 98 MDVELAVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVS 143 +D++LAV+ + + ++ +GD F + ++K +KV +VS Sbjct: 350 VDIQLAVEMMHYATVPNAYDVALLLTGDKDFMPAMIRTRQKARKVGLVS 398 >gi|220936103|ref|YP_002515002.1| hypothetical protein Tgr7_2943 [Thioalkalivibrio sp. HL-EbGR7] gi|219997413|gb|ACL74015.1| conserved hypothetical protein [Thioalkalivibrio sp. HL-EbGR7] Length = 212 Score = 56.3 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 63/183 (34%), Gaps = 23/183 (12%) Query: 1 MFDPREKIALFIDGANLYASSKA---LGFDIDYRKL-LKAFRSRAIVIRAYYYTT---VV 53 M + + ++IDG N Y S + +D L ++ R ++R Y+T Sbjct: 1 MSSSQLRTIVYIDGFNFYYGSLKGTDYKW-LDLEALFVRVLGERNNLVRIKYFTAKVQPT 59 Query: 54 GDPEQQFSPLHPLLDWLH--------YNGFQVVAKVAKEFTENCGR-----KRVKSSMDV 100 L + Y G + +V+ E R K + DV Sbjct: 60 AQDPDVSIRQATYLRAIQKHSPKVEVYYGHFLRHRVSMENANPPPRLVHVWKNEEKGSDV 119 Query: 101 ELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRR 158 LA+ + + + VI S D + ++ KV + T + S QL+R Sbjct: 120 NLALHVLNDAWQDAYDCAVIVSNDSDLAESLRLVKTHHDKVIGLVTPGAPKRKTSAQLKR 179 Query: 159 QAD 161 AD Sbjct: 180 YAD 182 >gi|305681687|ref|ZP_07404493.1| conserved hypothetical protein [Corynebacterium matruchotii ATCC 14266] gi|305658847|gb|EFM48348.1| conserved hypothetical protein [Corynebacterium matruchotii ATCC 14266] Length = 406 Score = 56.3 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 40/191 (20%), Positives = 70/191 (36%), Gaps = 38/191 (19%) Query: 6 EKIALFIDGANL---YASSKALGF----DIDYRKLLKAFRS------RAIVIRAYYYTTV 52 E+ +F+D + L + +S +G +ID +++ + V R ++Y + Sbjct: 3 ERTQIFVDTSYLLASFYNSWEIGARAQLEIDLPAVVRTLGTMVTEQFEQPVHRQFWYDGI 62 Query: 53 VGDPEQQFSPLHPLLDWLHY-NGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE 111 + H L +G Q+ A E+ G +R + ++D L D S Sbjct: 63 PD------TGPHRYQRALRTCDGVQLRAGQLIEW----GERRTQKAVDTRLVADMVLTSV 112 Query: 112 G--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 + +V+ SGD V +V + SM+S LR D + L Sbjct: 113 RQEVTDIVLVSGDADMIPGVQEAVNHGIRVHLYGF--GWDSMSS-ALRHACDSLVIL--- 166 Query: 170 KNEIARDPDED 180 DP ED Sbjct: 167 ------DPRED 171 >gi|312141909|ref|YP_004009245.1| hypothetical protein REQ_46160 [Rhodococcus equi 103S] gi|311891248|emb|CBH50567.1| conserved hypothetical protein [Rhodococcus equi 103S] Length = 339 Score = 56.3 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 36/171 (21%), Positives = 61/171 (35%), Gaps = 30/171 (17%) Query: 10 LFIDGANLYASS--------KALGFDIDYRKLLKAF------RSRAIVIRAYYYTTVVGD 55 L+ID L AS+ G +DY KL+ + RS V+R ++Y + Sbjct: 18 LYIDAGYLLASAATRVTGTSLRGGIHVDYAKLVSSLVDAAQARSGLPVLRVHWYDSARNG 77 Query: 56 PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--L 113 P + L +V ++ + G + +D+ + +D + Sbjct: 78 VPD---PQQERIGELS----KVKLRLGR-----FGVNGEQKGVDLRIGLDLVAHARNGAS 125 Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTI--VSTVLSDPSMASDQLRRQADY 162 + + SGD T V Q +V + V + P S L R AD Sbjct: 126 DVFFLVSGDDDLTEAVDEAQVHGVQVVVFAVPSAEGKPHGVSRHLVRAADE 176 >gi|260774799|ref|ZP_05883701.1| hypothetical protein VIC_000167 [Vibrio coralliilyticus ATCC BAA-450] gi|260609224|gb|EEX35379.1| hypothetical protein VIC_000167 [Vibrio coralliilyticus ATCC BAA-450] Length = 259 Score = 56.3 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 33/172 (19%), Positives = 57/172 (33%), Gaps = 29/172 (16%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 D +KIA+ ID N + +D+ +LK ++ Y + Sbjct: 5 DSEKKIAVLIDAENAQYAV------LDF--VLKELSKHGHILVKKAY---GDWSSECLKN 53 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 L+ L N ++F+ G K+S D + +DA + S + + S Sbjct: 54 WKQPLNELAIN-------PIQQFSYTQG----KNSSDAAMIIDAMDLLYSNKYDAFALIS 102 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 D FT L + L+ + + R D F+ LK Sbjct: 103 SDSDFTKLASRLKE-----SQIYVFGVGEKKTPLAFRNACDDFIYTEVLKER 149 >gi|187939647|gb|ACD38790.1| conserved hypothetical protein [Pseudomonas aeruginosa] gi|187939724|gb|ACD38865.1| hypothetical protein PACL_0607 [Pseudomonas aeruginosa] Length = 286 Score = 56.3 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 28/176 (15%), Positives = 55/176 (31%), Gaps = 31/176 (17%) Query: 5 REKIALFIDGANLYASS---------KALGFDIDYRKLLKAF-------RSRAIVIRAYY 48 ++ +F+D L+A + ++ ++ ++R Y+ Sbjct: 1 MNRLGIFVDAGYLFAQGSTAIAGNPERRTNLSLNEEAVVTQLLETAADLSGGTPLLRIYW 60 Query: 49 YTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE 108 Y + GD N +V G + K +D + +D E Sbjct: 61 YDAI-GDRGPTLEQKR----LASSNNVKVRMGTL------NGSGQQKG-VDSMIVIDMIE 108 Query: 109 QS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDP-SMASDQLRRQAD 161 + + V+ SGD V Q +V ++ S S L ++AD Sbjct: 109 LARNHAIADAVLLSGDEDVRVGVQFAQSYGVRVHLIGIANEHDNSHQSLSLIQEAD 164 >gi|254884216|ref|ZP_05256926.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|254837009|gb|EET17318.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] Length = 217 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 25/144 (17%), Positives = 49/144 (34%), Gaps = 13/144 (9%) Query: 4 PREKIALFIDGANLYASSKALGFD----IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59 ++++ ++IDG N Y K + +D KL+++F + A Y + + Sbjct: 7 NKQRVIIYIDGFNFYYGLKTAPWKKYYWLDIVKLMESFLRPNQELIAVKYFSARPTDVGK 66 Query: 60 FSPLHPLLDWLHYNG-FQVVA-KVAKEFTE-----NCGRKRVKSSMDVELAVDAFEQS-- 110 N F+++ K K+ E N + DV +A + Sbjct: 67 RKRQDAFFQANKENPKFKLILGKYLKKEIECFKCHNIIHTYEEKESDVRIATQIVADAFQ 126 Query: 111 EGLEHLVIFSGDGCFTTLVAALQR 134 + +I S D V + Sbjct: 127 HNCDLAIIVSADSDMIPAVELAKE 150 >gi|258648761|ref|ZP_05736230.1| conserved hypothetical protein [Prevotella tannerae ATCC 51259] gi|260851088|gb|EEX70957.1| conserved hypothetical protein [Prevotella tannerae ATCC 51259] Length = 238 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 25/155 (16%), Positives = 57/155 (36%), Gaps = 16/155 (10%) Query: 3 DPREKIALFIDGANLYASS------KALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP 56 + ++++ ++IDG N Y + + +D KL ++F + A Y + D Sbjct: 24 EEKQRVIVYIDGFNFYYGLKFTARWRKYYW-LDVVKLFESFMRPNQELIAVKYFSAKPDD 82 Query: 57 EQQFSPLHPLLDWLHYNG-FQVVA-KVAKEFT-----ENCGRKRVKSSMDVELAVDAFEQ 109 +Q + N F+++ K K+ +N + DV +A Sbjct: 83 IEQSRRQNAFFQANKENPKFRLILGKYLKKEITCFKCKNVIHTYEEKETDVRIATQIVAD 142 Query: 110 S--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIV 142 + + + ++ S D + + +KV + Sbjct: 143 AYQKNCDVAIVVSADSDMVPAIELATQARQKVFVY 177 >gi|269124811|ref|YP_003298181.1| hypothetical protein Tcur_0546 [Thermomonospora curvata DSM 43183] gi|268309769|gb|ACY96143.1| protein of unknown function DUF88 [Thermomonospora curvata DSM 43183] Length = 426 Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 28/147 (19%), Positives = 51/147 (34%), Gaps = 16/147 (10%) Query: 34 LKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKR 93 + R + A + E GF+V+ + Sbjct: 51 RRWLVLRCYLNPAGWVDYHPPLGEPSRLQFFRFRSSFISAGFEVI--------DCPRYNA 102 Query: 94 VKSSMDVELAVD---AFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS 150 K+ D+ +AVD A + VI SGD T L+ L+R ++ ++S+V + + Sbjct: 103 TKNGADIRIAVDVVDALSADVTYDEFVIASGDSDMTPLLQRLRRADRRTVVMSSVDAAEA 162 Query: 151 MASDQLRRQADYFMDLAYLKNEIARDP 177 S AD ++ L + +P Sbjct: 163 FIS-----IADRTINGQQLLELVQGEP 184 >gi|325672821|ref|ZP_08152515.1| hypothetical protein HMPREF0724_10296 [Rhodococcus equi ATCC 33707] gi|325556074|gb|EGD25742.1| hypothetical protein HMPREF0724_10296 [Rhodococcus equi ATCC 33707] Length = 328 Score = 55.9 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 36/171 (21%), Positives = 61/171 (35%), Gaps = 30/171 (17%) Query: 10 LFIDGANLYASS--------KALGFDIDYRKLLKAF------RSRAIVIRAYYYTTVVGD 55 L+ID L AS+ G +DY KL+ + RS V+R ++Y + Sbjct: 7 LYIDAGYLLASAATRVTGTSLRGGIHVDYAKLVSSLVDAAQARSGLPVLRVHWYDSARNG 66 Query: 56 PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--L 113 P + L +V ++ + G + +D+ + +D + Sbjct: 67 VPD---PQQERIGELS----KVKLRLGR-----FGVNGEQKGVDLRIGLDLVAHARNGAS 114 Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTI--VSTVLSDPSMASDQLRRQADY 162 + + SGD T V Q +V + V + P S L R AD Sbjct: 115 DVFFLVSGDDDLTEAVDEAQVHGVQVVVFAVPSAEGKPHGVSRHLVRAADE 165 >gi|237784719|ref|YP_002905424.1| hypothetical protein ckrop_0084 [Corynebacterium kroppenstedtii DSM 44385] gi|237757631|gb|ACR16881.1| hypothetical protein ckrop_0084 [Corynebacterium kroppenstedtii DSM 44385] Length = 639 Score = 55.9 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 35/171 (20%), Positives = 63/171 (36%), Gaps = 27/171 (15%) Query: 6 EKIALFIDGANL---YASSKALG----FDIDY----RKLLKAFRS--RAIVIRAYYYTTV 52 E+ +F+D + L + +S G +ID L + V R +Y + Sbjct: 3 ERTLVFVDTSYLLASFYNSWEEGARTQLEIDLPEVCSVLDRMITQHVGQPVQRQNWYDGI 62 Query: 53 VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS-- 110 ++ +D G Q+ A + E G++R + ++D L D + Sbjct: 63 PDSGPHRYQRALRTVD-----GVQLRAGLLIE----TGQRRTQKAVDTRLVADMILAAVR 113 Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161 + +V+ SGD V +V + S SM S+ LR + D Sbjct: 114 QQCSDMVLVSGDQDMIPGVVEASAMGVRVHLYGF--SWDSM-SNALRHKCD 161 >gi|119898152|ref|YP_933365.1| hypothetical protein azo1861 [Azoarcus sp. BH72] gi|119670565|emb|CAL94478.1| hypothetical protein azo1861 [Azoarcus sp. BH72] Length = 502 Score = 55.9 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 34/178 (19%), Positives = 65/178 (36%), Gaps = 33/178 (18%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTV-VGDPEQQF----- 60 K ALF+D N+Y+ + L D R L F R + +++ + D Sbjct: 2 KSALFVDFDNVYSGLRKL----DPR-LADLFAQRPQDWLQWLISSLGLPDDAPVDAKRRV 56 Query: 61 ---------SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELA---VDAFE 108 + GF+++ A K+S D+ + +D + Sbjct: 57 LVRRCYLNPQAYQRFRWSFNLAGFEIIDCPAL-------TSEGKTSTDIHMVLDTIDLLQ 109 Query: 109 QSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTI--VSTVLSDPSMASDQLRRQADYFM 164 + +IFS D FT ++ L+R ++ T+ + + ++D L D F+ Sbjct: 110 HEAHYDEFIIFSADADFTPVLRKLRRWDRRTTVLAIGFPSAAYRASADLLIDV-DTFV 166 >gi|319442042|ref|ZP_07991198.1| hypothetical protein CvarD4_09805 [Corynebacterium variabile DSM 44702] Length = 456 Score = 55.9 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 33/172 (19%), Positives = 60/172 (34%), Gaps = 29/172 (16%) Query: 6 EKIALFIDGANL---YA----SSKALGFDIDYRKLLKAFRSRAI------VIRAYYYTTV 52 E+ +F+D + L + + +ID +++ + A+ V R +Y + Sbjct: 3 ERTLVFVDTSYLLASFYNSWETGARSQLEIDLPEVVSVIQRMAVNQLDQPVHRQNWYDGI 62 Query: 53 VGDPEQQFSPLHPLLDWLHYN-GFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAF--EQ 109 S H L G Q+ A E+ + R+ K+ +D L D Sbjct: 63 PD------SGPHRYQRALRSEPGVQLRAGQLIEWGD---RRTQKA-VDTRLVADMVKASL 112 Query: 110 SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161 + +++ SGD V +V + SM+S LR D Sbjct: 113 TGTCSDIILVSGDADMIPGVEEAVDAGVRVHLYGF--GWDSMSS-NLRFACD 161 >gi|227541425|ref|ZP_03971474.1| conserved hypothetical protein [Corynebacterium glucuronolyticum ATCC 51866] gi|227182813|gb|EEI63785.1| conserved hypothetical protein [Corynebacterium glucuronolyticum ATCC 51866] Length = 448 Score = 55.9 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 33/171 (19%), Positives = 57/171 (33%), Gaps = 27/171 (15%) Query: 6 EKIALFIDGANL---YA----SSKALGFDIDYRKLLKAFRS------RAIVIRAYYYTTV 52 E+ +F+D + L + + +ID +++ + + R +Y Sbjct: 3 ERTMVFVDTSYLLASFYNSWETGARAQLEIDLPEVVAQLKGMIEDQLGQPIHRQMWY--- 59 Query: 53 VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG 112 G P+ H L NG Q+ E+ G +R + ++D L D Sbjct: 60 DGIPDSGPHRYHRALRAC--NGVQLRVGQLIEW----GERRTQKAVDTRLVADLVLAGVH 113 Query: 113 --LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161 V+ SGD V +V + SM+S LR D Sbjct: 114 QTCSDAVLVSGDADMIPGVNEATNSGVRVHLYGF--GWDSMSS-ALRHACD 161 >gi|296446572|ref|ZP_06888514.1| protein of unknown function DUF88 [Methylosinus trichosporium OB3b] gi|296255926|gb|EFH03011.1| protein of unknown function DUF88 [Methylosinus trichosporium OB3b] Length = 272 Score = 55.5 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 24/90 (26%), Positives = 37/90 (41%), Gaps = 9/90 (10%) Query: 75 FQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAAL 132 + V A+ + R + +DV+LAVDA + + +GD F LV+AL Sbjct: 88 YHVRTGEARHRRK---RGNEQKMVDVQLAVDALSMASRGLFTSCTLITGDLDFKPLVSAL 144 Query: 133 QRKVKKVTIVSTVLSDPSMASDQLRRQADY 162 VT+ L +D L+ AD Sbjct: 145 VDMGVDVTL----LFPDDETNDDLKAAADQ 170 >gi|38234817|ref|NP_940584.1| hypothetical protein DIP2281 [Corynebacterium diphtheriae NCTC 13129] gi|38201081|emb|CAE50805.1| Conserved hypothetical protein [Corynebacterium diphtheriae] Length = 458 Score = 55.5 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 35/172 (20%), Positives = 62/172 (36%), Gaps = 29/172 (16%) Query: 6 EKIALFIDGANL---YASSKALG----FDIDYRKLLKAFRS------RAIVIRAYYYTTV 52 E+ +F+D + L + +S +G +ID +++ + V R ++Y + Sbjct: 3 ERTQVFVDTSYLLASFYNSWEIGARAQLEIDLPEVVATLGNMIHNQLGQPVHRQFWYDGI 62 Query: 53 VGDPEQQFSPLHPLLDWLHY-NGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE 111 S H L +G Q+ A E+ G +R + ++D L D Sbjct: 63 PE------SGPHRYQRALRTCDGVQLRAGQLIEW----GERRTQKAVDTRLVADMVLAGV 112 Query: 112 G--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161 +V+ SGD V +V + SM+S LR D Sbjct: 113 RREFTDIVLVSGDADMIPGVQEAVNAGVRVHLYGF--GWDSMSS-ALRHACD 161 >gi|300933975|ref|ZP_07149231.1| hypothetical protein CresD4_07892 [Corynebacterium resistens DSM 45100] Length = 482 Score = 55.5 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 31/171 (18%), Positives = 64/171 (37%), Gaps = 27/171 (15%) Query: 6 EKIALFIDGANL---YASSKALG----FDIDYRKLLKAFRS------RAIVIRAYYYTTV 52 E+ +++D + L + ++ G +ID +++ + + V R ++Y + Sbjct: 3 ERTQVYVDTSYLLASFYNAWETGARAQLEIDLPEVVSVLSTMVQNQLKQPVHRQFWYDGI 62 Query: 53 VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS-- 110 + ++ G Q+ A E+ + R+ K+ +D L D + Sbjct: 63 PENGPHRYQRSLR-----SEPGVQLRAGQLIEWGD---RRTQKA-VDTRLVADMVIAAMK 113 Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161 + +V+ SGD V +V + SM S+QLR D Sbjct: 114 GQVSDIVLVSGDADMLPGVEEAVAAGIRVHLYGF--GWDSM-SNQLRYACD 161 >gi|229496814|ref|ZP_04390524.1| cold shock protein [Porphyromonas endodontalis ATCC 35406] gi|229316269|gb|EEN82192.1| cold shock protein [Porphyromonas endodontalis ATCC 35406] Length = 298 Score = 55.5 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 38/201 (18%), Positives = 71/201 (35%), Gaps = 35/201 (17%) Query: 7 KIALFIDGANLYASSKALGF-DIDYRKL----LKAFRSR------------AIVIRAYYY 49 +I +F DG S + +L L F ++ A+Y+ Sbjct: 9 RIGVFYDGNYFLHVSNYYNYSHERKNRLSIAGLHHFIKNQVAQQESTDERLCQIVDAHYF 68 Query: 50 TTVVGDPEQQFSPL-----HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAV 104 + E + + D L G + G + + +DV LA+ Sbjct: 69 RGRLTANEAKATGQTLYYDRLFDDILSSEGVTTHYLPLR---SKQGGGKQEKGIDVWLAL 125 Query: 105 DAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVS-----TVLSDPSM---ASD 154 +AFEQ+ + LV+ + DG + L+ L +V ++S T + SM S Sbjct: 126 EAFEQAFYKRFNVLVLIACDGDYVPLIRKLNALGTRVMVLSWDFEYTNDNGKSMTTRTSQ 185 Query: 155 QLRRQADYFMDLAYLKNEIAR 175 +L + Y + + + + R Sbjct: 186 ELLEEVTYPIAMHEIIDNRVR 206 >gi|227487719|ref|ZP_03918035.1| conserved hypothetical protein [Corynebacterium glucuronolyticum ATCC 51867] gi|227092340|gb|EEI27652.1| conserved hypothetical protein [Corynebacterium glucuronolyticum ATCC 51867] Length = 448 Score = 55.5 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 33/171 (19%), Positives = 57/171 (33%), Gaps = 27/171 (15%) Query: 6 EKIALFIDGANL---YA----SSKALGFDIDYRKLLKAFRS------RAIVIRAYYYTTV 52 E+ +F+D + L + + +ID +++ + + R +Y Sbjct: 3 ERTMVFVDTSYLLASFYNSWETGARAQLEIDLPEVVAQLKGMIEDQLGQPIHRQMWY--- 59 Query: 53 VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG 112 G P+ H L NG Q+ E+ G +R + ++D L D Sbjct: 60 DGIPDSGPHRYHRALRAC--NGVQLRVGQLIEW----GERRTQKAVDTRLVADLVLAGVH 113 Query: 113 --LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161 V+ SGD V +V + SM+S LR D Sbjct: 114 QTCSDAVLVSGDADMIPGVNEATNSGVRVHLYGF--GWDSMSS-ALRHACD 161 >gi|159042661|ref|YP_001531455.1| hypothetical protein Dshi_0105 [Dinoroseobacter shibae DFL 12] gi|157910421|gb|ABV91854.1| conserved hypothetical protein [Dinoroseobacter shibae DFL 12] Length = 236 Score = 55.5 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 36/85 (42%), Gaps = 7/85 (8%) Query: 87 ENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVST 144 ++ K++ D+ L +DA + + V+ S D FT+L L+ K+V + Sbjct: 66 QDTANTTGKNASDIGLVIDAMDILHGGRFDGFVLVSSDSDFTSLANRLREDGKEVIGIGE 125 Query: 145 VLSDPSMASDQLRRQADYFMDLAYL 169 + + LR + F+ + + Sbjct: 126 KKAP-----ESLRNVCNRFIFIENI 145 >gi|296129138|ref|YP_003636388.1| protein of unknown function DUF88 [Cellulomonas flavigena DSM 20109] gi|296020953|gb|ADG74189.1| protein of unknown function DUF88 [Cellulomonas flavigena DSM 20109] Length = 474 Score = 55.5 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 42/182 (23%), Positives = 66/182 (36%), Gaps = 27/182 (14%) Query: 7 KIALFIDGANLYASSKALG------FDIDYRKLLKAFRSRAIV---IRAYYYTTVVGDPE 57 + ALF+D N+Y L F D L + V + + Sbjct: 12 RSALFVDFDNVYIGLARLDPRAAEAFATDPGHWLSELGQGSDVDGDLTRRFLVRACYLNP 71 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVEL---AVDAFEQSEGLE 114 +S P GFQVV ++ KSS D+ L AVDA + Sbjct: 72 SVYSRFRP---NFTRAGFQVVDCP-------SLTQQGKSSADINLVLDAVDALAAPTRYD 121 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 VI S D FT L + ++VTI++ + P+ ++ R AD + L + + Sbjct: 122 EFVIVSADADFTPLAQRCRADDRRVTIIT---ASPAASAY--RSVADTVIGADALADLVT 176 Query: 175 RD 176 + Sbjct: 177 QT 178 >gi|257053809|ref|YP_003131642.1| protein of unknown function DUF88 [Halorhabdus utahensis DSM 12940] gi|256692572|gb|ACV12909.1| protein of unknown function DUF88 [Halorhabdus utahensis DSM 12940] Length = 148 Score = 55.5 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 35/162 (21%), Positives = 51/162 (31%), Gaps = 31/162 (19%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 + L++DG N+ FD+D L + A Y L+ Sbjct: 15 VGLYVDGPNV----LREEFDVDLDDLRAIATEYGRIGAARLYL--------DEHATPGLI 62 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVIFSGDGCF 125 GF VV +DV+LAVDA + +E LVI S D F Sbjct: 63 QAGEARGFAVVT--------------TSGDVDVKLAVDATRAASEARIETLVIASRDTDF 108 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 + + + V+ + SD L A L Sbjct: 109 KPALEVAADRGCRT--VAIAPGEHGR-SDALSNTAHESHSLE 147 >gi|217968493|ref|YP_002353727.1| hypothetical protein Tmz1t_0028 [Thauera sp. MZ1T] gi|217505820|gb|ACK52831.1| protein of unknown function DUF88 [Thauera sp. MZ1T] Length = 509 Score = 55.5 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 31/179 (17%), Positives = 65/179 (36%), Gaps = 35/179 (19%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF------ 60 K ALF+D N+Y+ + L I F + + ++ + + P+ Sbjct: 2 KSALFVDFDNVYSGLRKLDQAI-----ADRFARQP-LEWMHWIISKLELPDHSPEGARRR 55 Query: 61 ----------SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELA---VDAF 107 + GF+++ A K+S D+ + +D Sbjct: 56 VLVRRCYLNPQAYQRFRPSFNLAGFEIIDCPAL-------TSEGKTSTDIHMVLDIIDLL 108 Query: 108 EQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTI--VSTVLSDPSMASDQLRRQADYFM 164 + + ++FS D FT ++ L+R ++ T+ + + ++D L Q D F+ Sbjct: 109 QHETHYDEFIVFSADADFTPVLRKLRRWDRRTTVLAIGFPSAAYRASADLLIDQ-DEFV 166 >gi|258544860|ref|ZP_05705094.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826] gi|258519883|gb|EEV88742.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826] Length = 329 Score = 55.1 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 39/98 (39%), Gaps = 7/98 (7%) Query: 77 VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQR 134 V+ K A + K + D+ L +DA E S + + S D FT L ++ Sbjct: 57 VLLKHALVPVQQFAYTTGKDATDMCLIIDAMELLYSGIFDGFCLVSSDSDFTPLANHIRS 116 Query: 135 KVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 + +T+ + R+ D F+ L L++E Sbjct: 117 RG--LTVYGF---GKRNTPEAFRQSCDRFIYLENLQDE 149 >gi|254439173|ref|ZP_05052667.1| conserved hypothetical protein [Octadecabacter antarcticus 307] gi|198254619|gb|EDY78933.1| conserved hypothetical protein [Octadecabacter antarcticus 307] Length = 233 Score = 55.1 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 20/99 (20%), Positives = 39/99 (39%), Gaps = 7/99 (7%) Query: 76 QVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVIFSGDGCFTTLVAALQ 133 +V+ ++ + + K++ D+ L +DA + + VI S D FT L L+ Sbjct: 54 EVIPELGLVARQETANTKQKNASDIGLVIDAMDILHGGKFDGFVIVSSDSDFTGLANRLR 113 Query: 134 RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 + V + LR + F+ + L N+ Sbjct: 114 EDGRTVIGIGEAK-----TPQSLRNVCNRFIFIENLIND 147 >gi|289705143|ref|ZP_06501547.1| conserved hypothetical protein [Micrococcus luteus SK58] gi|289558171|gb|EFD51458.1| conserved hypothetical protein [Micrococcus luteus SK58] Length = 360 Score = 55.1 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 43/112 (38%), Gaps = 8/112 (7%) Query: 73 NGFQ-VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLV 129 NG++ + A + + K+S D L +DA + ++ + S D FT L Sbjct: 53 NGWKKALNHHAIQPVQQFAYTVGKNSSDSALIIDAMDLLWMGNVDAFALVSSDSDFTRLA 112 Query: 130 AALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 L+ K+V + LR D F+ L L D D+D+ Sbjct: 113 TRLREGGKRVIGLGARK-----TPASLRNAVDQFIYLELLGTATDHDVDDDE 159 >gi|294084800|ref|YP_003551560.1| hypothetical protein SAR116_1233 [Candidatus Puniceispirillum marinum IMCC1322] gi|292664375|gb|ADE39476.1| hypothetical protein SAR116_1233 [Candidatus Puniceispirillum marinum IMCC1322] Length = 267 Score = 55.1 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 30/70 (42%), Gaps = 3/70 (4%) Query: 95 KSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMA-- 152 + ++DV L++ ++ + +I SGD + V ++ K V VS D + Sbjct: 175 EKTVDVNLSLGMVLKAPIYDTAIIVSGDQDYVPAVQQVKNLGKHVINVSFQKIDGGLLPG 234 Query: 153 -SDQLRRQAD 161 + +L D Sbjct: 235 GARKLNEVTD 244 >gi|317011853|gb|ADU85599.1| hypothetical protein HPSA_08374 [Helicobacter pylori SouthAfrica7] Length = 193 Score = 55.1 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 36/185 (19%), Positives = 65/185 (35%), Gaps = 30/185 (16%) Query: 3 DPREKIALFIDGANL-----YASSKALGFDIDYR----KL-----LKAFRSRAI-----V 43 + +K A+F+D NL + K DY K+ L F S + Sbjct: 2 NHTQKTAIFVDFENLRIGVFNKTWKKKRLFFDYNNNPQKVVDFCNLCVFDSYHDKDLLNL 61 Query: 44 IRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVA--KVAKEFTENCGRKRVKSSMDVE 101 R ++YT D + + L L + K+ K G V+ +D+ Sbjct: 62 YRIFFYTAKPLDSHSKKEDILKFLSTLECLNHTALRLGKLVKR-----GDVEVQKQVDML 116 Query: 102 LAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQ 159 L +D E S +E +V+ D + + + + I+ + + S L + Sbjct: 117 LGIDMLEISLKHFVEKVVLIGYDSDMSPALKLARTNGIQTEIILFEDLEQKIES-SLTKH 175 Query: 160 ADYFM 164 D F+ Sbjct: 176 CD-FI 179 >gi|84500442|ref|ZP_00998691.1| hypothetical protein OB2597_10806 [Oceanicola batsensis HTCC2597] gi|84391395|gb|EAQ03727.1| hypothetical protein OB2597_10806 [Oceanicola batsensis HTCC2597] Length = 236 Score = 55.1 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 35/88 (39%), Gaps = 7/88 (7%) Query: 87 ENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVST 144 + + K++ D+ L +DA + + V+ S D FT L ++ + V + Sbjct: 65 QETANTKGKNASDIGLVIDAMDILHTGRFDGFVLVSSDSDFTALANRVREQGLDVIGIGE 124 Query: 145 VLSDPSMASDQLRRQADYFMDLAYLKNE 172 + + LR + F+ + + E Sbjct: 125 SKAP-----ESLRNVCNRFILIENIVEE 147 >gi|297192241|ref|ZP_06909639.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC 25486] gi|297151272|gb|EDY63689.2| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC 25486] Length = 312 Score = 55.1 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 33/188 (17%), Positives = 62/188 (32%), Gaps = 31/188 (16%) Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53 A+F+D +YA++ L FD+D L++AF +A ++R Y+Y Sbjct: 48 AIFVDAGYVYAAAGLLVAGTEDRRSFDLDAEGLIEAFIDKARTIFADSRLLRVYWY---- 103 Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112 + + K N + +D + D + Sbjct: 104 --DGARRRIHTSEQQAIAELP------DVKVRLGNLNANNQQKGVDSLIRTDLESLARHR 155 Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169 + + GD + V A Q +V + + ++ L + D DL + Sbjct: 156 AISDAALVGGDEDLVSAVEAAQGYGARVHLWGIEAGEGRNQAEPLLWEVDSQRTFDLDFC 215 Query: 170 KNEIARDP 177 + I R P Sbjct: 216 RPYITRRP 223 >gi|302521778|ref|ZP_07274120.1| conserved hypothetical protein [Streptomyces sp. SPB78] gi|318062102|ref|ZP_07980823.1| hypothetical protein SSA3_29472 [Streptomyces sp. SA3_actG] gi|302430673|gb|EFL02489.1| conserved hypothetical protein [Streptomyces sp. SPB78] Length = 310 Score = 55.1 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 40/193 (20%), Positives = 66/193 (34%), Gaps = 44/193 (22%) Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRS-------RAIVIRAYYYTTVV 53 A+F+D LYA++ L GF++D + L+ A + ++R Y+Y Sbjct: 33 AIFVDAGYLYAAAGRLVTGTEDRKGFELDAQGLIDALVDCASHVFPHSRLLRVYWY---D 89 Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112 G + + + L K N + +D + D + Sbjct: 90 GARRRIHTAEQQSIAELP---------DVKVRLGNLNANNQQKGVDSLIRGDLESLARHR 140 Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD---------Y 162 + V+ GD V A Q +V + + LR QAD Sbjct: 141 AIGDAVLLGGDEDLVPAVEAAQDFGARVHLWGIEAPEG------LRNQADPLLWEVDTQR 194 Query: 163 FMDLAYLKNEIAR 175 +DLA+LK AR Sbjct: 195 TLDLAFLKPYAAR 207 >gi|260574189|ref|ZP_05842194.1| protein of unknown function DUF88 [Rhodobacter sp. SW2] gi|259023655|gb|EEW26946.1| protein of unknown function DUF88 [Rhodobacter sp. SW2] Length = 246 Score = 55.1 bits (132), Expect = 5e-06, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 64/165 (38%), Gaps = 37/165 (22%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +++A+ IDG NL A + I+ ++ + + ++ + Sbjct: 15 KTQRVAVMIDGENL-----------------SAGLAGQIITKSLAFGRLTI--KRVYGNA 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSG 121 L W GF+++ K++ D+ L ++A E ++ LVI S Sbjct: 56 IRLTQWEAAPGFRLI-----------HSGNGKNATDLLLCIEAMELVHSGLVDTLVIASS 104 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 D F+ L A L K ++V + ASD R+ F++L Sbjct: 105 DRDFSHLAAHLCEKGQQVIGMGEAK-----ASDAFRKACTRFIEL 144 >gi|103487486|ref|YP_617047.1| hypothetical protein Sala_2003 [Sphingopyxis alaskensis RB2256] gi|98977563|gb|ABF53714.1| hypothetical protein Sala_2003 [Sphingopyxis alaskensis RB2256] Length = 213 Score = 54.7 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 24/146 (16%), Positives = 50/146 (34%), Gaps = 19/146 (13%) Query: 7 KIALFIDGANLYASSK-ALGF---DIDYRKLLKAFRSRA--IVIRAYYYTTVVGDPEQQF 60 + F DG NL+ S+K A G+ + D L + + + +YT V ++ F Sbjct: 13 RAVAFFDGQNLFHSAKQAFGYSWPNFDPTLLAERVCQDHGWQLQQTRFYTGVPDAADKPF 72 Query: 61 --SPLHPLLDWLHYNGFQVVAKVAK------EFTENCGRKRVKSS---MDVELAVDAFEQ 109 + G V + + + + +DV +A+D Sbjct: 73 WNHFWVAKAAQMARQGVHVFTRSLRYRNKKVRLPDGTEHSFLDGDEKGIDVRIALDVIRL 132 Query: 110 S--EGLEHLVIFSGDGCFTTLVAALQ 133 + + ++F D T + ++ Sbjct: 133 ALKREFDVAILFCRDQDLTEVADEIR 158 >gi|297563529|ref|YP_003682503.1| hypothetical protein Ndas_4611 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296847977|gb|ADH69997.1| protein of unknown function DUF88 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 574 Score = 54.7 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 34/190 (17%), Positives = 69/190 (36%), Gaps = 37/190 (19%) Query: 5 REKIALFIDGANL-------YASSK---ALGFDIDYRKLLKAF------RSRAIVIRAYY 48 ++ ALF+D L ++ ++ + DY L++ R+ ++R Y+ Sbjct: 1 MDRCALFVDAGYLLADGAMAVHGTRNRDSVSW--DYTGLVQFLNEVARDRTGLPLLRCYW 58 Query: 49 YTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE 108 Y V D Q + + + G + + +R D Sbjct: 59 YEAVADDRRTQEQDGIADIPGIKFRG--ARIRPGRREGVESYVQR-----------DLTT 105 Query: 109 QSEG---LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165 + + V+ SGD +VA +Q +VT+V + S LRR+ D ++ Sbjct: 106 LARTGVLCD-AVLVSGDEDMAPVVADVQDMGVRVTVVHVSVEGNWTISRALRRECDDLIE 164 Query: 166 L--AYLKNEI 173 + +L+ + Sbjct: 165 IGAGHLRPHV 174 >gi|332158255|ref|YP_004423534.1| hypothetical protein PNA2_0614 [Pyrococcus sp. NA2] gi|331033718|gb|AEC51530.1| hypothetical protein PNA2_0614 [Pyrococcus sp. NA2] Length = 165 Score = 54.7 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 35/173 (20%), Positives = 64/173 (36%), Gaps = 36/173 (20%) Query: 4 PREKIALFIDGANLYASSKALGFDI-DYRKLLKAFRS-RAIVIRAYYYTTVVGDPEQQFS 61 P++ I L IDG N+ K G + D +K L+ R + Y Sbjct: 22 PQKTIGLIIDGPNILR--KEFGIKLEDIKKALERIGKIRVAKVVLNQYAP---------- 69 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIF 119 L++ + GF+ + V DV +A++A E ++ + + Sbjct: 70 --QGLIEAVVNQGFEPII--------------VAGDTDVRVAIEAMELIYNANVDVIALA 113 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 + D F L++ +RK K+ ++ S L+ ADY + + E Sbjct: 114 TRDADFLPLISEAKRKGKETVVIGVEPGF----SVALQNAADYIIKMEKKAEE 162 >gi|239918004|ref|YP_002957562.1| conserved hypothetical protein TIGR00288 [Micrococcus luteus NCTC 2665] gi|281415820|ref|ZP_06247562.1| hypothetical protein MlutN2_11509 [Micrococcus luteus NCTC 2665] gi|239839211|gb|ACS31008.1| conserved hypothetical protein TIGR00288 [Micrococcus luteus NCTC 2665] Length = 371 Score = 54.7 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 44/112 (39%), Gaps = 8/112 (7%) Query: 73 NGFQ-VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLV 129 NG++ + A + + K+S D L +DA + ++ + S D FT L Sbjct: 53 NGWKKALNHHAIQPVQQFAYTVGKNSSDSALIIDAMDLLWMGNVDAFALVSSDSDFTRLA 112 Query: 130 AALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 L+ K+V + LR D F+ L L +D D+D+ Sbjct: 113 TRLREGGKRVIGLGARK-----TPASLRNAVDQFIYLELLGTATDQDVDDDE 159 >gi|220935117|ref|YP_002514016.1| hypothetical protein Tgr7_1948 [Thioalkalivibrio sp. HL-EbGR7] gi|219996427|gb|ACL73029.1| hypothetical protein Tgr7_1948 [Thioalkalivibrio sp. HL-EbGR7] Length = 199 Score = 54.7 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 28/151 (18%), Positives = 55/151 (36%), Gaps = 26/151 (17%) Query: 5 REKIALFIDGANLY----ASSKALGFDIDYRKLLKAFRSRA----IVIRAYYYTTVVGDP 56 + + +F+D NL+ S ++ G+ +D+ +LL A A +++ Y V+ D Sbjct: 28 NDSVHVFVDDQNLFWGVLNSGQSRGYRVDFGRLLTAASRDASGKTRFVKSAYIAGVIPDD 87 Query: 57 EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEH- 115 + GF V + + G + D L + S EH Sbjct: 88 D-------SFWKIAENQGFTVR----RGYLSGAGGGQRSKQDDAYLITEI--TSTLYEHQ 134 Query: 116 ----LVIFSGDGCFTTLVAALQRKVKKVTIV 142 +V+ +GD + + K +V + Sbjct: 135 GPSTIVLVAGDADYVPPLIRANEKGWRVEVA 165 >gi|78189938|ref|YP_380276.1| cold shock protein [Chlorobium chlorochromatii CaD3] gi|78172137|gb|ABB29233.1| Cold shock protein [Chlorobium chlorochromatii CaD3] Length = 310 Score = 54.7 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 33/173 (19%), Positives = 61/173 (35%), Gaps = 35/173 (20%) Query: 1 MFDPRE----KIALFIDGANLYASSKALGFDIDYRK------------LLKAFRSR---- 40 M + R+ +I +F DG S + + + + + Sbjct: 1 MVNNRDLSLTRIGVFYDGNYFLHISNYYNYF--HERKARISISGLHHFVRNYIAQQEGSD 58 Query: 41 ---AIVIRAYYYTTVVGDPEQQFSP-----LHPLLDWLHYNGFQVVAKVAKEFTENCGRK 92 ++ A+Y+ + E D L G K T G + Sbjct: 59 EQLCQIVDAHYFRGRLNAYEAAQEGNALFYDRLFDDILSSEGVTTHYLPVK--TSQTGVR 116 Query: 93 RVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVS 143 K +DV LA++AFEQ+ + + LV+ + DG + L+ L +V ++S Sbjct: 117 YEKG-IDVWLALEAFEQAFYKRFDVLVLIASDGDYVPLIRKLNTLGTRVMVLS 168 >gi|296268176|ref|YP_003650808.1| hypothetical protein Tbis_0183 [Thermobispora bispora DSM 43833] gi|296090963|gb|ADG86915.1| protein of unknown function DUF88 [Thermobispora bispora DSM 43833] Length = 468 Score = 54.7 bits (131), Expect = 6e-06, Method: Composition-based stats. Identities = 33/178 (18%), Positives = 69/178 (38%), Gaps = 31/178 (17%) Query: 5 REKIALFIDGANL-------YASSK---ALGFD----IDYRKLLKAFRSRAIVIRAYYYT 50 ++ ALF+D L ++ A+ +D + + L R+ ++R Y+Y Sbjct: 1 MDRCALFVDAGYLLADGARAVHGTRQREAVSWDLPGLVRFLGKLSRDRTGLPLLRCYWYE 60 Query: 51 TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110 V + +P H +L + G ++ + GR+ MD ++ D + Sbjct: 61 ATVEG---RRTPEHDVLADIP--GIKLRLSRIRP-----GRRE---GMDAQVHRDLMTLA 107 Query: 111 EG---LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165 + V+ SGD ++ Q +VT+V ++ LR++ D ++ Sbjct: 108 RNNAICD-AVVVSGDEDLVQVICDAQDLGIRVTVVQIAGESGWSSARALRQECDDLIE 164 >gi|300780231|ref|ZP_07090087.1| conserved hypothetical protein [Corynebacterium genitalium ATCC 33030] gi|300534341|gb|EFK55400.1| conserved hypothetical protein [Corynebacterium genitalium ATCC 33030] Length = 402 Score = 54.7 bits (131), Expect = 6e-06, Method: Composition-based stats. Identities = 30/172 (17%), Positives = 57/172 (33%), Gaps = 29/172 (16%) Query: 6 EKIALFIDGANL---YA----SSKALGFDIDYRKLLKAFRS------RAIVIRAYYYTTV 52 E+ +F+D + L + + +ID +++ + + R ++Y + Sbjct: 3 ERTVVFVDTSYLLASFYNSWETGARSQLEIDLPEVVANLGTMITQQLHQPIHRQFWYDGI 62 Query: 53 VGDPEQQFSPLHPLLDWLHY-NGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS- 110 S H L +G Q+ E+ G +R + +D L D + Sbjct: 63 PD------SGPHRYQRALRTCDGVQLRTGQLIEW----GERRTQKGVDTRLVADIVANAM 112 Query: 111 -EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161 V+ SGD V ++ + SM+S LR D Sbjct: 113 RGQYSDFVLVSGDADMIPGVEEATNAGVRMHLYGF--GWDSMSS-ALRHACD 161 >gi|227548518|ref|ZP_03978567.1| conserved hypothetical protein [Corynebacterium lipophiloflavum DSM 44291] gi|227079347|gb|EEI17310.1| conserved hypothetical protein [Corynebacterium lipophiloflavum DSM 44291] Length = 404 Score = 54.7 bits (131), Expect = 6e-06, Method: Composition-based stats. Identities = 34/172 (19%), Positives = 59/172 (34%), Gaps = 29/172 (16%) Query: 6 EKIALFIDGANL---YASSKALGF----DIDYRKLLKAFRS------RAIVIRAYYYTTV 52 E+ +F+D + L + +S +G +ID +++ + + R Y+Y + Sbjct: 3 ERTLVFVDTSYLLASFYNSWEIGARAQLEIDLPEVVSTLGAMITHQLHQPIHRQYWYDGI 62 Query: 53 VGDPEQQFSPLHPLLDWLHY-NGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE 111 S H L +G Q+ E+ G +R + +D L D + Sbjct: 63 PD------SGPHRYQRALRTCDGVQLRTGQLIEW----GERRTQKGVDTRLVADLVVNAS 112 Query: 112 G--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161 V+ SGD V +V + SM S LR D Sbjct: 113 RQQFTDFVLLSGDADMIPGVEEATGFGVRVHLYGF--GWDSM-STALRHSCD 161 >gi|318080774|ref|ZP_07988106.1| hypothetical protein SSA3_29788 [Streptomyces sp. SA3_actF] Length = 302 Score = 54.7 bits (131), Expect = 6e-06, Method: Composition-based stats. Identities = 40/193 (20%), Positives = 66/193 (34%), Gaps = 44/193 (22%) Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRS-------RAIVIRAYYYTTVV 53 A+F+D LYA++ L GF++D + L+ A + ++R Y+Y Sbjct: 33 AIFVDAGYLYAAAGRLVTGTEDRKGFELDAQGLIDALVDCASHVFPHSRLLRVYWY---D 89 Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112 G + + + L K N + +D + D + Sbjct: 90 GARRRIHTAEQQSIAELP---------DVKVRLGNLNANNQQKGVDSLIRGDLESLARHR 140 Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD---------Y 162 + V+ GD V A Q +V + + LR QAD Sbjct: 141 AIGDAVLLGGDEDLVPAVEAAQDFGARVHLWGIEAPEG------LRNQADPLLWEVDTQR 194 Query: 163 FMDLAYLKNEIAR 175 +DLA+LK AR Sbjct: 195 TLDLAFLKPYAAR 207 >gi|34496201|ref|NP_900416.1| hypothetical protein CV_0746 [Chromobacterium violaceum ATCC 12472] gi|34102055|gb|AAQ58422.1| hypothetical protein CV_0746 [Chromobacterium violaceum ATCC 12472] Length = 180 Score = 54.4 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 31/193 (16%), Positives = 64/193 (33%), Gaps = 48/193 (24%) Query: 10 LFIDGANLYASSKAL----------------------GFDIDYRKLLKAFRSR--AIVIR 45 ++ID +NLY + + G+ I + KL + + R Sbjct: 5 IYIDNSNLYIEGRRVSAVQQRLATNINEAMRDGILDHGYTISFGKLHEFLTGGDLTKIKR 64 Query: 46 AYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAV- 104 A Y + + + GF++ E+ + +D +A Sbjct: 65 AALYGSRPPPNDSIWKSAE-------RAGFEL-------HLEDRNVANKEKKIDTGIATL 110 Query: 105 ---DAFEQ-SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160 DA++ + V+ +GD + + L+ +V +V S A+ +L+ A Sbjct: 111 LTKDAYKHGKPEEDLFVLVAGDKDYVPTLNELRADGYQVEVV-----FWSHAAKELKDAA 165 Query: 161 DYFMDLAYLKNEI 173 F+ L + Sbjct: 166 TRFISLDQHLEHL 178 >gi|332974970|gb|EGK11880.1| hypothetical protein HMPREF9374_1743 [Desmospora sp. 8437] Length = 273 Score = 54.4 bits (130), Expect = 7e-06, Method: Composition-based stats. Identities = 36/175 (20%), Positives = 67/175 (38%), Gaps = 25/175 (14%) Query: 4 PREKIALFIDGANLYASSKALGFDID--------YRKLLKAFRSRAIVIRAYYYTTVVGD 55 + I+++ID N+Y K + D + +L + + I + Y Sbjct: 3 KDKSISIWIDLENVYYGLKKYHMNPDHPDPKHNLFLRLQEHYGRHKIRMMGVY------G 56 Query: 56 PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE---QSEG 112 +Q P + L + + + G + K++ D++L +DA + Sbjct: 57 DFEQLGPDISMNQLLKKH-----VHIHQVHGNGRGEEERKNAADIQLCLDAMDVLHTVSE 111 Query: 113 LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASD-QLRRQADYFMDL 166 +E VI S D L+ L + K+V + L D S++ D L D F +L Sbjct: 112 VETFVIVSADQDMIPLMDRLWSRGKRVEL--FCLQDESLSRDAHLEAFCDEFYNL 164 >gi|328948943|ref|YP_004366280.1| hypothetical protein Tresu_2114 [Treponema succinifaciens DSM 2489] gi|328449267|gb|AEB14983.1| Domain of unknown function DUF88 [Treponema succinifaciens DSM 2489] Length = 311 Score = 54.4 bits (130), Expect = 7e-06, Method: Composition-based stats. Identities = 30/137 (21%), Positives = 52/137 (37%), Gaps = 21/137 (15%) Query: 52 VVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGR-KRVKSSMDVELAVD---AF 107 +G + L GFQ + + GR +K AVD F Sbjct: 64 FMGTNAEFDRENQKFYRALDEAGFQRNTFNLRSQESSNGRLPTLKED-----AVDTTIVF 118 Query: 108 EQS---------EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDP---SMASDQ 155 + E + LV+++GDG + LV+ L+ + +V ++ P + AS Sbjct: 119 NTAKEFYTKSRDERFDTLVLYAGDGDLSVLVSGLKAEGVRVFVIYYDFKTPVSITRASQN 178 Query: 156 LRRQADYFMDLAYLKNE 172 L AD + ++ L +E Sbjct: 179 LLETADKAISISSLLDE 195 >gi|333024585|ref|ZP_08452649.1| hypothetical protein STTU_2089 [Streptomyces sp. Tu6071] gi|332744437|gb|EGJ74878.1| hypothetical protein STTU_2089 [Streptomyces sp. Tu6071] Length = 310 Score = 54.4 bits (130), Expect = 7e-06, Method: Composition-based stats. Identities = 33/170 (19%), Positives = 57/170 (33%), Gaps = 35/170 (20%) Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRS-------RAIVIRAYYYTTVV 53 A+F+D LYA++ L GF++D + L+ A + ++R Y+Y Sbjct: 33 AIFVDAGYLYAAAGRLVTGTEDRKGFELDAQGLIDALVDCASHVFPHSRLLRVYWY---D 89 Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112 G + + + L K N + +D + D + Sbjct: 90 GARRRIHTAEQQSIAELP---------DVKVRLGNLNANNQQKGVDSLIRGDLESLARHR 140 Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161 + V+ GD V A Q +V + + LR QAD Sbjct: 141 AIGDAVLLGGDEDLVPAVEAAQDFGARVHLWGIEAPEG------LRNQAD 184 >gi|83591783|ref|YP_425535.1| hypothetical protein Rru_A0443 [Rhodospirillum rubrum ATCC 11170] gi|83574697|gb|ABC21248.1| hypothetical protein Rru_A0443 [Rhodospirillum rubrum ATCC 11170] Length = 216 Score = 54.4 bits (130), Expect = 7e-06, Method: Composition-based stats. Identities = 14/72 (19%), Positives = 26/72 (36%), Gaps = 4/72 (5%) Query: 75 FQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAAL 132 ++V+ K + N R + +D + D + + V+ S D F + L Sbjct: 120 YKVIGKC--PYCGNDMRGTEEKGVDTAIVTDMISLAWENAFDIAVLVSADRDFVPVAEYL 177 Query: 133 QRKVKKVTIVST 144 K KV + Sbjct: 178 HTKGIKVIHAAF 189 >gi|260914714|ref|ZP_05921179.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325] gi|260631218|gb|EEX49404.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325] Length = 261 Score = 54.4 bits (130), Expect = 8e-06, Method: Composition-based stats. Identities = 30/177 (16%), Positives = 59/177 (33%), Gaps = 29/177 (16%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 + +++A+ ID N AS++ D + +L+ Y V Q Sbjct: 13 ESTKRLAVLIDADN--ASAR------DIKAILEEVTKYGEATVKRIYGNFVSTNGQWKET 64 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122 ++ K ++F G+ M ++ A+D + + I S D Sbjct: 65 INQY-----------AIKPMQQFAFTTGKNATDGFMIID-AMDLL-YTNRFDGFCIVSSD 111 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 FT L L+ T+ +A R F+ + L ++ +P + Sbjct: 112 SDFTALAIRLKEHGA--TVYGFGKKQTPLA---FRNACSRFIYVENLHDD---EPSQ 160 >gi|213965345|ref|ZP_03393541.1| conserved hypothetical protein [Corynebacterium amycolatum SK46] gi|213951961|gb|EEB63347.1| conserved hypothetical protein [Corynebacterium amycolatum SK46] Length = 227 Score = 54.4 bits (130), Expect = 8e-06, Method: Composition-based stats. Identities = 29/121 (23%), Positives = 47/121 (38%), Gaps = 25/121 (20%) Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG-LEH-----LV 117 P ++ L GF V AK +++ DV+ D + + +V Sbjct: 90 RPWVEALRNVGFAVFAKP-----------KIEEDTDVD--PDMIAHIQRRYDEGVLRSVV 136 Query: 118 IFSGDG-CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 + S DG F L+ L + +VT++ AS L A F+DL +K R+ Sbjct: 137 VASADGQNFQELLEKLASEGIRVTVIGF----HEHASWALASDAIRFVDLEEIKGVF-RE 191 Query: 177 P 177 P Sbjct: 192 P 192 >gi|327403774|ref|YP_004344612.1| hypothetical protein Fluta_1784 [Fluviicola taffensis DSM 16823] gi|327319282|gb|AEA43774.1| hypothetical protein Fluta_1784 [Fluviicola taffensis DSM 16823] Length = 209 Score = 54.0 bits (129), Expect = 8e-06, Method: Composition-based stats. Identities = 33/179 (18%), Positives = 61/179 (34%), Gaps = 25/179 (13%) Query: 7 KIALFIDGANLYASSKALGFD-------IDYRKLLK----AFRSRAIVIRAYYYTTVV-- 53 K++ IDG NLY S + L + +D + LL A A + +Y+T + Sbjct: 2 KVSFLIDGFNLYHSIEDLEKNNGIKAKWLDIKTLLHSYMGAIGGTAKFEKIFYFTALRLH 61 Query: 54 --GDPEQQFSPLHPLLDWLHYNGFQVVA---KVAKEFT---ENCGRKRVKSSMDVELAVD 105 + + L G + + K + F + DV +A Sbjct: 62 VQKEKPNSIERHKRYIAALETKGIEAIYGGFKPKEVFCKKCNETFETFEEKKTDVAIASK 121 Query: 106 AFEQSEG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADY 162 E + + + I SGD + ++ K+ I+ +D+L+ D Sbjct: 122 IIELAAKAMCDVIAIVSGDTDLIPAIELAKQINPKIKIIVFFPYKR--TNDELKIYTDQ 178 >gi|229489850|ref|ZP_04383707.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] gi|229323360|gb|EEN89124.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] Length = 334 Score = 54.0 bits (129), Expect = 9e-06, Method: Composition-based stats. Identities = 34/172 (19%), Positives = 63/172 (36%), Gaps = 32/172 (18%) Query: 10 LFIDGANLYASS--------KALGFDIDYRKLL------KAFRSRAIVIRAYYY-TTVVG 54 L+ID L AS+ G +DY KL+ ++ ++R ++Y + G Sbjct: 7 LYIDAGYLLASAATRVTGTSLRGGIHVDYSKLIGSLLAAAEVKAGLPMLRVHWYDSARNG 66 Query: 55 DPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG-- 112 P+ Q + L +V ++ + G + +D+ + +D + Sbjct: 67 IPDAQQERIGELP--------KVKLRLGR-----FGVNGEQKGVDLRMGLDLVAHARNRA 113 Query: 113 LEHLVIFSGDGCFTTLVAALQRKVKKVTIVS--TVLSDPSMASDQLRRQADY 162 + + SGD V Q +V +++ TV S L R AD Sbjct: 114 SDVFFLVSGDDDLAEAVEEAQVHGVQVLLLAVPTVEGKAHGVSRHLIRAADE 165 >gi|11498667|ref|NP_069895.1| hypothetical protein AF1062 [Archaeoglobus fulgidus DSM 4304] gi|2649525|gb|AAB90177.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304] Length = 177 Score = 54.0 bits (129), Expect = 9e-06, Method: Composition-based stats. Identities = 29/182 (15%), Positives = 65/182 (35%), Gaps = 32/182 (17%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 R K+ + +DG N+ F+I+ +++ + + A + Sbjct: 22 LSQRRKVGVLVDGPNM----LRKEFNINLKEIREILSEYGDIKIAKVFL--------NQY 69 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIF 119 L++ + GF+ + +DV +AV+A E + ++ + + Sbjct: 70 ATEKLVEAIENQGFEPIV--------------TSGDVDVRMAVEAMELIYNDSIDAVALV 115 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 + D F ++ K+ I+ S L+ AD + L + + D DE Sbjct: 116 TRDADFKAVLMKAMEMGKETIIIGAEPGF----STALKNSADIAIVLNEDEEKEKGDADE 171 Query: 180 DK 181 ++ Sbjct: 172 EE 173 >gi|327401247|ref|YP_004342086.1| hypothetical protein Arcve_1367 [Archaeoglobus veneficus SNP6] gi|327316755|gb|AEA47371.1| protein of unknown function DUF88 [Archaeoglobus veneficus SNP6] Length = 186 Score = 54.0 bits (129), Expect = 9e-06, Method: Composition-based stats. Identities = 26/168 (15%), Positives = 63/168 (37%), Gaps = 32/168 (19%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 R K+ + +DG N+ F+I+ +++ + + A + Sbjct: 24 QDRRKVGVLVDGPNM----LRKEFNINLQEIREILSEYGDIKAAKVFL--------NQYA 71 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFS 120 L++ + GF+ + +DV +AV+A E + ++ + + + Sbjct: 72 SEKLVEAIENQGFEPIV--------------TSGDVDVRMAVEAMEMIYNDAIDAIALVT 117 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 D F +++ K+ I+ ++P ++ L+ AD + L Sbjct: 118 RDADFKSVLKKAMEMGKETIIIG---AEPGFSA-ALKNSADIAIVLNE 161 >gi|292656541|ref|YP_003536438.1| hypothetical protein HVO_2415 [Haloferax volcanii DS2] gi|291370393|gb|ADE02620.1| Uncharacterized conserved protein [Haloferax volcanii DS2] Length = 158 Score = 54.0 bits (129), Expect = 9e-06, Method: Composition-based stats. Identities = 35/168 (20%), Positives = 57/168 (33%), Gaps = 32/168 (19%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRS-RAIVIRAYYYTTVVGDPEQQFSP 62 P ++ALF+DG N+ FD+D + A RS + A Y Sbjct: 14 PSGRVALFVDGPNV----LRDEFDVDLDDIRAAGRSLGGQLSAARLYL--------DEHA 61 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFS 120 L+ GF+VV +DV+LAVD + + + + + S Sbjct: 62 TPGLIQAAEARGFEVVV--------------TSGDVDVKLAVDLTRYAVEDRADVIAVAS 107 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 D F + + ++ SD L+ A + M L Sbjct: 108 RDTDFKPALETANAYGLRTVAIAPGSYGR---SDALQNAATHAMTLDE 152 >gi|296268684|ref|YP_003651316.1| hypothetical protein Tbis_0698 [Thermobispora bispora DSM 43833] gi|296091471|gb|ADG87423.1| protein of unknown function DUF88 [Thermobispora bispora DSM 43833] Length = 304 Score = 54.0 bits (129), Expect = 9e-06, Method: Composition-based stats. Identities = 30/176 (17%), Positives = 60/176 (34%), Gaps = 29/176 (16%) Query: 3 DPREKIALFIDGANLYASSKA--LG------FDIDYRKLLKAFRS-------RAIVIRAY 47 P K AL +D LYA++ LG F + +L+K+ + ++R Y Sbjct: 10 HPTSKFALLVDVGYLYAAAGEVLLGAKERKEFRVRADELIKSLQKHAAERIPGGELLRVY 69 Query: 48 YYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAF 107 +Y + L W K N + + +D ++ D Sbjct: 70 WYDAARDRVPTVDQRVIAQLPW------------VKVRLGNLNARGQQKGVDAQIRSDLE 117 Query: 108 EQSEG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161 + + ++ +GD V A Q +V + + +++L ++D Sbjct: 118 ALARHHAVSDTILIAGDEDMVPAVEAAQAYGVRVHLWGVEPPFGTNQAERLVWESD 173 >gi|312196812|ref|YP_004016873.1| hypothetical protein FraEuI1c_2978 [Frankia sp. EuI1c] gi|311228148|gb|ADP81003.1| protein of unknown function DUF88 [Frankia sp. EuI1c] Length = 553 Score = 54.0 bits (129), Expect = 9e-06, Method: Composition-based stats. Identities = 29/185 (15%), Positives = 63/185 (34%), Gaps = 46/185 (24%) Query: 7 KIALFIDGANLYASSKAL------GFDIDYRKLLKAFRS-----------RAIVIRAYYY 49 + ALF+D N++ + L F ++ + L + R ++ Y Y Sbjct: 15 RSALFVDFENIHMGLQRLDAAAANRFAVNPQCWLSWLETLAYPALGATDFRRDLLIRYCY 74 Query: 50 TTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ 109 V + GF VV K+S D+ + +D + Sbjct: 75 LNPVSSA--------RYRAYFTRAGFHVVDCP-------PLTAAGKNSADIHIVIDVLDI 119 Query: 110 SEG---LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADY---- 162 + +++ S D +T ++ L+ ++ I+++ ++ R D+ Sbjct: 120 LGHPTRFDEVILLSADADYTPVMLRLRAHDRRTVIITS-----GPSARAFRAACDHVVGE 174 Query: 163 --FMD 165 F+D Sbjct: 175 DAFID 179 >gi|15790568|ref|NP_280392.1| hypothetical protein VNG1608C [Halobacterium sp. NRC-1] gi|10581082|gb|AAG19872.1| conserved hypothetical protein [Halobacterium sp. NRC-1] Length = 187 Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 33/155 (21%), Positives = 54/155 (34%), Gaps = 31/155 (20%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 +ALF+DG N+ FD+D + + + Y PL+ Sbjct: 52 VALFVDGPNV----LRDEFDVDLDDVREIAGEVGPLAVTRLYL--------DEHATPPLI 99 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCF 125 G+ V +DV+LAVDA E +G++ L + S D F Sbjct: 100 QAGEARGYDVRV--------------TSGDVDVKLAVDATELVLDDGVDVLAVASRDTDF 145 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160 + +R+ + ++ SD LR A Sbjct: 146 KPVFEQAERRGVRTLAIAPGEHGR---SDALRNAA 177 >gi|56964892|ref|YP_176623.1| hypothetical protein ABC3128 [Bacillus clausii KSM-K16] gi|56911135|dbj|BAD65662.1| hypothetical protein [Bacillus clausii KSM-K16] Length = 280 Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 34/181 (18%), Positives = 67/181 (37%), Gaps = 37/181 (20%) Query: 1 MFDPRE--KIALFIDGANLYASS-KALGFDIDYRK--------LL-KAFRSRAIVIRAYY 48 MF ++ +A+FID N+Y + + ++ + L + +++ RAY Sbjct: 12 MFKTKDHNNVAIFIDYDNVYWTLMNRYNHNPNHEEQEKNLFNCLWDRYGQNQVRTFRAYA 71 Query: 49 YTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE 108 F + L L ++ ++ + K+S D+EL +DA E Sbjct: 72 ----------DFQRIRSSLTDLQKQ----RVQIRHVYSNDKEGDSRKNSSDIELCIDAIE 117 Query: 109 QS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMA--------SDQLR 157 + E + V + D +++ L K K+V + + P S+ LR Sbjct: 118 STYKDENISCYVFVTADSDMVPIMSRLMYKGKRVELYYLSEAAPKHTDITNYSHYSEDLR 177 Query: 158 R 158 Sbjct: 178 D 178 >gi|217968518|ref|YP_002353752.1| hypothetical protein Tmz1t_0056 [Thauera sp. MZ1T] gi|217505845|gb|ACK52856.1| protein of unknown function DUF88 [Thauera sp. MZ1T] Length = 448 Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 64/179 (35%), Gaps = 35/179 (19%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF------ 60 K ALF+D N+Y+ + L D + F + + + + P+ Sbjct: 2 KSALFVDFDNVYSGLRKL----DP-AIADRFARQP-LEWVNWVIGELELPDHAPAGARRR 55 Query: 61 ----------SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110 + GF+++ A K+S D+ + +D + Sbjct: 56 LLVRRCYLNPQAYQRFRPSFNLAGFEIIDCPAL-------TSEGKTSTDIHMVLDIIDLL 108 Query: 111 EG---LEHLVIFSGDGCFTTLVAALQRKVKKVTI--VSTVLSDPSMASDQLRRQADYFM 164 + + ++FS D FT ++ L+R ++ T+ + + ++D L D F+ Sbjct: 109 QHEARYDEFIVFSADADFTPVLRKLRRWDRRTTVLAIGFPSAAYRASADLLIDP-DEFV 166 >gi|32455334|ref|NP_862346.1| hypothetical protein pHel5_14 [Helicobacter pylori] gi|20502866|gb|AAM22673.1|AF469113_13 unknown [Helicobacter pylori] Length = 197 Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 34/177 (19%), Positives = 61/177 (34%), Gaps = 32/177 (18%) Query: 3 DPREKIALFIDGANL-----YASSKALGFDIDYR----KL-----LKAFRSRAI-----V 43 + +K A+F+D NL + K DY K+ L F S + Sbjct: 2 NHTQKTAIFVDFENLRIGVFDKTWKKKRLFFDYNNNPQKVVDFCNLCVFDSYHDKDLLNL 61 Query: 44 IRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVA--KVAKEFTENCGRKRVKSSMDVE 101 R ++YT D + + L L + K+ K G V+ +D+ Sbjct: 62 YRIFFYTAKPLDSHSKKKDILNFLSTLECLNHTALRLGKLVKR-----GDVEVQKQVDML 116 Query: 102 LAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTV----LSDPSMA 152 L +D E S +E +V+ D + + + + I+ +PS+ Sbjct: 117 LGIDMLEISLKHFVEKVVLIGYDSDMSPALKLARTNGIQTEIILFEDLKQKIEPSLT 173 >gi|326381644|ref|ZP_08203338.1| hypothetical protein SCNU_01805 [Gordonia neofelifaecis NRRL B-59395] gi|326199891|gb|EGD57071.1| hypothetical protein SCNU_01805 [Gordonia neofelifaecis NRRL B-59395] Length = 355 Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 35/195 (17%), Positives = 66/195 (33%), Gaps = 35/195 (17%) Query: 10 LFIDGANLYASS--------KALGFDIDYRKLLKAF------RSRAIVIRAYYYTTVVGD 55 L+ID L AS+ G +++Y +L+ S +R ++Y Sbjct: 38 LYIDTGYLLASAATRVTGTSLRNGINVEYSRLIDTLIETAEKLSGLPTLRVHWY---DSA 94 Query: 56 PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGL 113 +PL + L +V ++ + G + +D+ + +D + Sbjct: 95 DNGVPNPLQQRIGELA----KVKLRLGR-----FGVNGEQKGVDLRIGLDLVAHARNNTS 145 Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTIVS--TVLSDPSMASDQLRRQADYFMDLAYLKN 171 + + SGD T V Q +V +++ T S L R AD + L Sbjct: 146 DVFFLVSGDDDLTEAVEEAQVHGVQVILLAVPTADGKSHGVSRHLIRAADDLHRIDGLAL 205 Query: 172 E-----IARDPDEDK 181 + + R P Sbjct: 206 DESILKVERQPAPKP 220 >gi|149915348|ref|ZP_01903875.1| predicted S-transferase [Roseobacter sp. AzwK-3b] gi|149810637|gb|EDM70478.1| predicted S-transferase [Roseobacter sp. AzwK-3b] Length = 232 Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 18/84 (21%), Positives = 33/84 (39%), Gaps = 7/84 (8%) Query: 99 DVELAVDAFEQSE--GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156 D+ L +DA + + V+ S D FT L + ++ + +V + + Sbjct: 77 DIALVIDAMDLMHSGRFDGFVLVSSDSDFTRLASRIREQGLEVYGIGARK-----TPEAF 131 Query: 157 RRQADYFMDLAYLKNEIARDPDED 180 R+ F+ L L E A P + Sbjct: 132 RKACKRFIYLENLGTEGAETPAPN 155 >gi|300859441|ref|YP_003784424.1| hypothetical protein cpfrc_02024 [Corynebacterium pseudotuberculosis FRC41] gi|300686895|gb|ADK29817.1| hypothetical protein cpfrc_02024 [Corynebacterium pseudotuberculosis FRC41] gi|302207120|gb|ADL11462.1| Conserved hypothetical protein [Corynebacterium pseudotuberculosis C231] gi|302331680|gb|ADL21874.1| Conserved hypothetical protein [Corynebacterium pseudotuberculosis 1002] gi|308277373|gb|ADO27272.1| Conserved hypothetical protein [Corynebacterium pseudotuberculosis I19] Length = 460 Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 36/172 (20%), Positives = 60/172 (34%), Gaps = 29/172 (16%) Query: 6 EKIALFIDGANL---YASSKALGF----DIDYRKLLKAFRS------RAIVIRAYYYTTV 52 E+ +F+D + L + +S +G +ID +++ S V R +Y + Sbjct: 3 ERTQVFVDTSYLLASFYNSWEIGARAQLEIDLPEVVATLGSMIQSQLGQPVHRQLWYDGI 62 Query: 53 VGDPEQQFSPLHPLLDWLHY-NGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE 111 S H L +G Q+ A E+ G +R + +D L D Sbjct: 63 PD------SGPHRYQRALRTCDGVQLRAGQLIEW----GERRTQKGVDTRLVADMVLAGA 112 Query: 112 G--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161 +V+ SGD V +V + SM+S LR D Sbjct: 113 RREFTDIVLVSGDADMIPGVQEAVNAGVRVHLYGF--GWDSMSS-ALRHCCD 161 >gi|254507560|ref|ZP_05119693.1| protein containing DUF88 [Vibrio parahaemolyticus 16] gi|219549447|gb|EED26439.1| protein containing DUF88 [Vibrio parahaemolyticus 16] Length = 240 Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 31/177 (17%), Positives = 61/177 (34%), Gaps = 29/177 (16%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 KIA+ ID N S L +++ S +I Y +Q Sbjct: 3 NRKIAVLIDSENTPHSKLNL--------IIEELSSFGQIIVKRAY---GDFSAEQLKNWK 51 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGD 122 L+ L A + + K+S D + +DA + S+ + + S D Sbjct: 52 QPLNEL-----------AIQAKQQFAYTSGKNSTDSLMIIDAMDLLYSQRFDAFALISSD 100 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 FT+L L+ ++ ++ +M + D F+ + L ++ + + Sbjct: 101 SDFTSLATRLRE--SEIHVIGV---GKAMTPTSFKNACDDFVAIENLNADVDLEQAQ 152 >gi|288932625|ref|YP_003436685.1| hypothetical protein Ferp_2286 [Ferroglobus placidus DSM 10642] gi|288894873|gb|ADC66410.1| protein of unknown function DUF88 [Ferroglobus placidus DSM 10642] Length = 161 Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 31/166 (18%), Positives = 66/166 (39%), Gaps = 32/166 (19%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 R+KI + +DG N+ F+++ +++ + S V A + Sbjct: 23 RKKIGVLVDGPNM----LRKEFNLNLKEIREILDSYGDVKIAKVFI--------NQYAGE 70 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGD 122 L++ + GF+ V +DV++AV+A E + ++ L + + D Sbjct: 71 KLVEAIENQGFEPVV--------------TSGDVDVKMAVEAMEIIYNDSIDVLALVTRD 116 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F ++ K K+ I+ ++P ++ L+ AD + L Sbjct: 117 ADFKAVLQKAMEKGKETIIIG---AEPGFSA-ALKNAADIAICLNE 158 >gi|282165479|ref|YP_003357864.1| hypothetical protein MCP_2809 [Methanocella paludicola SANAE] gi|282157793|dbj|BAI62881.1| conserved hypothetical protein [Methanocella paludicola SANAE] Length = 188 Score = 53.2 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 33/161 (20%), Positives = 58/161 (36%), Gaps = 34/161 (21%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIV-IRAYYYTTVVGDPEQQFSP 62 R IAL +DG N+ F ID + + + + + D Sbjct: 30 DRRNIALLVDGPNM----LRKEFQIDLEVVRDILKRYGDIKVGKVFLNQYASD------- 78 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 L++ + GF+ + +DV LAVDA E S ++ + I + Sbjct: 79 --KLVEAIENQGFEPII--------------GSGDVDVRLAVDAVELVFSPTIDTIAIVT 122 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161 D F ++A K+ + ++P + S L+ AD Sbjct: 123 RDADFKPVLAKANSHGKETIVFG---AEPGL-SIALKNVAD 159 >gi|91772864|ref|YP_565556.1| hypothetical protein Mbur_0855 [Methanococcoides burtonii DSM 6242] gi|91711879|gb|ABE51806.1| Protein of unknown function DUF88 [Methanococcoides burtonii DSM 6242] Length = 183 Score = 53.2 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 55/166 (33%), Gaps = 32/166 (19%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 R I L +DG N+ F+++ ++ + V + Sbjct: 23 RRSIGLLVDGPNV----LRKEFNVNLEEIRDVLKEYGNVKIGRVFLNQYASD-------- 70 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGD 122 L++ + NGF+ + S +DV LAV+ E ++ + + + D Sbjct: 71 KLVEAIENNGFEPII--------------CSSDVDVRLAVEGMELVYNPTIDTIALVTRD 116 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F L+ K+ + S LR ADY + L Sbjct: 117 ADFKPLLNKANEHGKETILFGVEPGF----STALRNSADYVIILEN 158 >gi|330987024|gb|EGH85127.1| hypothetical protein PLA107_18497 [Pseudomonas syringae pv. lachrymans str. M301315] Length = 206 Score = 53.2 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 35/183 (19%), Positives = 70/183 (38%), Gaps = 23/183 (12%) Query: 5 REKIALFIDGANLYASSKALGFD----IDYRKLLKA-FRSRAIVIRAYYYTTVVGDPEQ- 58 +++ ++DG NL K F +D L A F+ ++ +Y+T + + Sbjct: 1 MQRVITYVDGFNLSFGLKDSRFKKYYWLDLPALSAALFKPGQQLVATHYFTARIRTNGRN 60 Query: 59 --QFSPLHPLLDWLH-YNGFQVVAKVAKEFTENCG------RKRVKSSMDVELAVDAFEQ 109 +D L + V E T+ C + + DV +A Sbjct: 61 AADAKRQTSYIDALTAQDNLTVHEGHYLEKTQRCNGCGATWKAYEEKMTDVNIAAQMLAD 120 Query: 110 S--EGLEHLVIFSGDGCFTTLVAALQRK--VKKVTIVSTVLSDPSMASDQLRRQADYFMD 165 + + + I SGD TT + ++ + K++ +V P+ S QL++ A+ F+ Sbjct: 121 AYEDRFDTAFIISGDSDLTTPIQQVRNRFPNKRLIVV----FPPNRQSAQLKKAANGFLS 176 Query: 166 LAY 168 + Sbjct: 177 IGE 179 >gi|312136340|ref|YP_004003677.1| hypothetical protein Mfer_0112 [Methanothermus fervidus DSM 2088] gi|311224059|gb|ADP76915.1| protein of unknown function DUF88 [Methanothermus fervidus DSM 2088] Length = 174 Score = 53.2 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 25/170 (14%), Positives = 56/170 (32%), Gaps = 40/170 (23%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIV----IRAYYYTTVVGDPEQQFSPL 63 I L +DG N+ F ++ ++ + + + Y + Sbjct: 28 IGLLVDGPNM----LRKEFKLNLEQVKEILSEYGNLKVGKVLLNQYASD----------- 72 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSG 121 L++ + GF + V DV +A++A E ++ + + + Sbjct: 73 -KLIEAISNQGFSPIV--------------VAGDTDVYMAIEAMELIYNPNIDIIALMTR 117 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 D F ++ + K+ ++ S L+ AD+ + L K Sbjct: 118 DADFLPIINKAKENGKETIVIGAEPGF----SVALKNAADHTIILRSKKE 163 >gi|317132837|ref|YP_004092151.1| hypothetical protein Ethha_1898 [Ethanoligenens harbinense YUAN-3] gi|315470816|gb|ADU27420.1| hypothetical protein Ethha_1898 [Ethanoligenens harbinense YUAN-3] Length = 180 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 38/191 (19%), Positives = 69/191 (36%), Gaps = 40/191 (20%) Query: 10 LFIDGANL-----YASSKALG-----------------FDIDYRKLLKAFRSRAI--VIR 45 +++D +N+ Y S+ G + D+ KLL + R Sbjct: 5 VYVDNSNVWIEGKYYSAVKKGMVANIFDAHENKICDMPWGYDFGKLLNISCEGDENSLKR 64 Query: 46 AYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVD 105 A Y + D + ++ GF+V E KRV + D E+ D Sbjct: 65 AVLYGSKPTDNDSLWNAARRF-------GFEV---YHPERNVKNKEKRVDTGFDKEVLKD 114 Query: 106 AFEQS-EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 ++ +++++ +GD + A+ + K T+V AS+ L+ A F+ Sbjct: 115 LYKSVIGHDDNIILVAGDADHVPVAEAIVEEGMKFTLV-----FWDNASETLKNMASKFI 169 Query: 165 DLAYLKNEIAR 175 L EI R Sbjct: 170 SLNNYIAEITR 180 >gi|217968792|ref|YP_002354026.1| hypothetical protein Tmz1t_0344 [Thauera sp. MZ1T] gi|217506119|gb|ACK53130.1| protein of unknown function DUF88 [Thauera sp. MZ1T] Length = 504 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 33/171 (19%), Positives = 63/171 (36%), Gaps = 19/171 (11%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 K ALF+D N+Y+ + L D + F + + ++ S + Sbjct: 2 KSALFVDFDNVYSGLRKL----DP-AMADQFAQKPQRWMQWLVASLGLPEHSPESARRRV 56 Query: 67 LDWLHYNGFQVVAKVAKEFTEN--------CGRKRVKSSMDVELA---VDAFEQSEGLEH 115 L Y QV + F K+S D+ + +D + + Sbjct: 57 LVRRCYLNPQVYQRFRPSFNLAGFEIIDCPSLTSEGKTSTDIHMVLDIIDLLQHEAHYDE 116 Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTI--VSTVLSDPSMASDQLRRQADYFM 164 ++FS D FT ++ L+R ++ T+ + + ++D L Q D F+ Sbjct: 117 FIVFSADADFTPVLRKLRRWDRRTTVLAIGFPSAAYRASADLLIDQ-DLFV 166 >gi|284165328|ref|YP_003403607.1| hypothetical protein Htur_2050 [Haloterrigena turkmenica DSM 5511] gi|284014983|gb|ADB60934.1| protein of unknown function DUF88 [Haloterrigena turkmenica DSM 5511] Length = 156 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 37/163 (22%), Positives = 53/163 (32%), Gaps = 31/163 (19%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 + L +DG N++ FD+D L A R V Y L+ Sbjct: 23 VGLLVDGPNVF----RDEFDVDLNDLRDAARDLGRVGVIRLYL--------DEHATPGLI 70 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVIFSGDGCF 125 GF+V+ +DV+LAVDA ++ L I S D F Sbjct: 71 QAAEARGFEVIV--------------TSGDVDVKLAVDATALCSDGTIDRLAIGSRDTDF 116 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 ++ V V+ SD LR AD + L Sbjct: 117 KPVLEYAGTVG--VETVAIAPGTYGR-SDALRNAADEAITLGD 156 >gi|218248953|ref|YP_002374324.1| hypothetical protein PCC8801_4244 [Cyanothece sp. PCC 8801] gi|257062039|ref|YP_003139927.1| hypothetical protein Cyan8802_4306 [Cyanothece sp. PCC 8802] gi|218169431|gb|ACK68168.1| protein of unknown function DUF88 [Cyanothece sp. PCC 8801] gi|256592205|gb|ACV03092.1| protein of unknown function DUF88 [Cyanothece sp. PCC 8802] Length = 299 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 32/159 (20%), Positives = 59/159 (37%), Gaps = 26/159 (16%) Query: 7 KIALFIDGANLYASSKALGFD------IDYRKLLKAFRSR-----------AIVIRAYYY 49 +I +F DG S ++ + L + R + ++ A+Y+ Sbjct: 9 RIGIFYDGNYFLHVSNYYNYNHERKARVSIPGLHEFIRHQVAKEEGVDVRLCQIVDAHYF 68 Query: 50 TTVVGDPEQQFSPL---HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDA 106 + E + L D L G + + G K + +DV LA++A Sbjct: 69 RGRLSAGEASRNQLYYDRVFDDILMSEGVITHYLPLRTW----GGKMEEKGIDVWLALEA 124 Query: 107 FEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVS 143 FE + + LV+ + DG + LV L +V ++S Sbjct: 125 FELAFYKRFSVLVLIACDGDYVPLVRKLNTLGTRVMVLS 163 >gi|163746469|ref|ZP_02153827.1| hypothetical protein OIHEL45_13730 [Oceanibulbus indolifex HEL-45] gi|161380354|gb|EDQ04765.1| hypothetical protein OIHEL45_13730 [Oceanibulbus indolifex HEL-45] Length = 232 Score = 52.4 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 20/85 (23%), Positives = 34/85 (40%), Gaps = 7/85 (8%) Query: 87 ENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVST 144 + + K++ D+ L + A + S + +VI S D FT LV L+ V + Sbjct: 66 QETANTKGKNASDIGLVIQAMDILHSRRFDIIVIVSSDSDFTALVNRLREDGVTVIGIGE 125 Query: 145 VLSDPSMASDQLRRQADYFMDLAYL 169 D LR + F+ + L Sbjct: 126 KK-----THDSLRNVYNRFILIENL 145 >gi|260579645|ref|ZP_05847514.1| conserved hypothetical protein [Corynebacterium jeikeium ATCC 43734] gi|258602286|gb|EEW15594.1| conserved hypothetical protein [Corynebacterium jeikeium ATCC 43734] Length = 455 Score = 52.4 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 32/172 (18%), Positives = 60/172 (34%), Gaps = 29/172 (16%) Query: 6 EKIALFIDGANL---YA----SSKALGFDIDYRKLLKAFRS------RAIVIRAYYYTTV 52 E+ +++D + L + + +ID +++ + V R ++Y + Sbjct: 3 ERTQVYVDTSYLLASFYNSWDTGARAQLEIDLPEVVAVLGQMIQDQLKQPVHRQFWYDGI 62 Query: 53 VGDPEQQFSPLHPLLDWLHYN-GFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS- 110 S H L G Q+ A E+ + R+ K+ +D L D + Sbjct: 63 PD------SGPHRYQRSLRSEPGVQLRAGQLIEWGD---RRTQKA-VDTRLVADIVIAAM 112 Query: 111 -EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161 + +V+ SGD V +V + SM+S LR D Sbjct: 113 KRQVSDIVLVSGDADMLPGVEEAVAAGIRVHLYGF--GWDSMSS-ALRFACD 161 >gi|317132397|ref|YP_004091711.1| hypothetical protein Ethha_1443 [Ethanoligenens harbinense YUAN-3] gi|315470376|gb|ADU26980.1| hypothetical protein Ethha_1443 [Ethanoligenens harbinense YUAN-3] Length = 201 Score = 52.4 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 29/187 (15%), Positives = 60/187 (32%), Gaps = 35/187 (18%) Query: 5 REKIALFIDGANL------YASSKALGFD---IDYR----KLLKAFRSRAIVIRAYYYTT 51 +++ +FID N Y + G +DY +L K +++ + + Sbjct: 1 MQRVMVFIDQLNFEIALLNYY--RDNGSQAPRLDYNAIPVELTKLLPGENHLVKTFLFVP 58 Query: 52 VVGDPEQQFSPLHPLLDWLHYNG----FQVVAKVAKEFT----------ENCGRKRVKSS 97 + +W++ F V+ + + + Sbjct: 59 KPDEFLMNLPRWQHYSNWINGMKNQHYFTVIEGSYVARQIDESIPMDANDPRSYYKEEKG 118 Query: 98 MDVELAVDAFE--QSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQ 155 D+ +AV + +I SGD + T++ L K T+++ V S Sbjct: 119 TDINIAVHVLTKGFMNAYDTALILSGDSDYVTVLDILNMIGK-TTVIAGVKGQ--NISK- 174 Query: 156 LRRQADY 162 LR+ D Sbjct: 175 LRKSCDD 181 >gi|119714385|ref|YP_921350.1| hypothetical protein Noca_0118 [Nocardioides sp. JS614] gi|119535046|gb|ABL79663.1| protein of unknown function DUF88 [Nocardioides sp. JS614] Length = 286 Score = 52.4 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 39/174 (22%), Positives = 59/174 (33%), Gaps = 30/174 (17%) Query: 1 MFDPRE-KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59 M +P + ++A+ ID N+ AS A LL + Y + Sbjct: 1 MTEPADVRLAVLIDADNVSASHAA--------DLLAELARYGVPTVKRAY------GDWT 46 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLV 117 L L + Q ++F G K+S D L +DA + S L+ Sbjct: 47 TQQLAGWKSELARHAIQ----PIQQFANTVG----KNSTDSALIIDAMDLLYSGHLDAFA 98 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 I S D FT L L+ K V L+ D F+ L L++ Sbjct: 99 IVSSDSDFTRLATRLRESGKTV-----YGLGRRRTPASLQAACDKFIFLEVLRD 147 >gi|329888562|ref|ZP_08267160.1| hypothetical protein BDIM_04870 [Brevundimonas diminuta ATCC 11568] gi|328847118|gb|EGF96680.1| hypothetical protein BDIM_04870 [Brevundimonas diminuta ATCC 11568] Length = 246 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 59/168 (35%), Gaps = 29/168 (17%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 ++A+ IDG N AS++ F A + A + L Sbjct: 14 RLAVLIDGEN--ASARIAE---------ALFTEIATLGEASARRIYG---DAASPALRGW 59 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGC 124 +D V+ + A ++ +N + K+S D+ L +DA + S + + S D Sbjct: 60 ID--------VLPRWAIQWQQNFQNTKGKNSGDIALVIDAMDLLHSGRFDGFCLVSSDSD 111 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 FT L A ++ + V + + R+ F+ L Sbjct: 112 FTRLAARIREQG--VPVYGFGERK---TPESFRQACTRFIYTENLTGR 154 >gi|68535150|ref|YP_249855.1| hypothetical protein jk0087 [Corynebacterium jeikeium K411] gi|68262749|emb|CAI36237.1| hypothetical protein jk0087 [Corynebacterium jeikeium K411] Length = 451 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 32/172 (18%), Positives = 60/172 (34%), Gaps = 29/172 (16%) Query: 6 EKIALFIDGANL---YA----SSKALGFDIDYRKLLKAFRS------RAIVIRAYYYTTV 52 E+ +++D + L + + +ID +++ + V R ++Y + Sbjct: 3 ERTQVYVDTSYLLASFYNSWDTGARAQLEIDLPEVVAVLGQMIQDQLKQPVHRQFWYDGI 62 Query: 53 VGDPEQQFSPLHPLLDWLHYN-GFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS- 110 S H L G Q+ A E+ + R+ K+ +D L D + Sbjct: 63 PD------SGPHRYQRSLRSEPGVQLRAGQLIEWGD---RRTQKA-VDTRLVADIVIAAM 112 Query: 111 -EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161 + +V+ SGD V +V + SM+S LR D Sbjct: 113 KRQVSDIVLVSGDADMLPGVEEAVAAGIRVHLYGF--GWDSMSS-ALRFACD 161 >gi|288917691|ref|ZP_06412054.1| hypothetical protein FrEUN1fDRAFT_1749 [Frankia sp. EUN1f] gi|288350906|gb|EFC85120.1| hypothetical protein FrEUN1fDRAFT_1749 [Frankia sp. EUN1f] Length = 108 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 25/69 (36%), Gaps = 2/69 (2%) Query: 77 VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQR 134 VV + + + +DV LAVD + + V+FS D + ++ Sbjct: 3 VVRRQLRYPKAWPAEPAQEKGIDVALAVDFVRLACESAYDVGVLFSRDTDLVPALETVRD 62 Query: 135 KVKKVTIVS 143 V + S Sbjct: 63 LGAHVEVAS 71 >gi|226226060|ref|YP_002760166.1| hypothetical protein GAU_0654 [Gemmatimonas aurantiaca T-27] gi|226089251|dbj|BAH37696.1| hypothetical protein [Gemmatimonas aurantiaca T-27] Length = 728 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 46/124 (37%), Gaps = 9/124 (7%) Query: 64 HPLLDWLHYNGFQV-VAKVAKEFTENCGRKRVKSSM-DVELAVDAFEQS---EGLEHLVI 118 DW Y + V + + + + K + D+ LA+DA E + V+ Sbjct: 53 RAYADWRRYPQYIVPLTEASIDLIFAPAYGSSKKNATDIRLAIDALELVFTRPEIGTFVL 112 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178 SGD F+++V L+ K V + +SD L D + L + D Sbjct: 113 LSGDSDFSSMVIKLKEYGKYV----IGVGIRESSSDLLVMNCDEYYSYNALAGLVKTGED 168 Query: 179 EDKK 182 E + Sbjct: 169 ETTR 172 >gi|14520299|ref|NP_125774.1| hypothetical protein PAB0043 [Pyrococcus abyssi GE5] gi|5457514|emb|CAB49005.1| Conserved archaebacterial protein, DUF88 family [Pyrococcus abyssi GE5] Length = 162 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 34/168 (20%), Positives = 61/168 (36%), Gaps = 36/168 (21%) Query: 8 IALFIDGANLYASSKALGFDI-DYRKLLKAFRS-RAIVIRAYYYTTVVGDPEQQFSPLHP 65 I L IDG N+ K G + D +K L+ R + Y Sbjct: 23 IGLIIDGPNILR--KEFGIKLEDIKKALERIGKIRVAKVVLNQYAP------------QG 68 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDG 123 L++ + GF+ + V DV +A++A E ++ + + + D Sbjct: 69 LIEAVVNQGFEPII--------------VAGDTDVRMAIEAMELIYNADVDVIALATRDA 114 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 F L++ +RK K+ ++ S L+ ADY + + K Sbjct: 115 DFLPLISEAKRKGKETVVIGVEPGF----SVALQNAADYIIKMEKKKE 158 >gi|327404779|ref|YP_004345617.1| hypothetical protein Fluta_2799 [Fluviicola taffensis DSM 16823] gi|327320287|gb|AEA44779.1| hypothetical protein Fluta_2799 [Fluviicola taffensis DSM 16823] Length = 250 Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 36/175 (20%), Positives = 61/175 (34%), Gaps = 35/175 (20%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 +K+A+ ID N+ SS +++L+ Y Sbjct: 1 MNEQKMAVLIDADNVPYSS--------IKEMLEEVAKTGTPTIKRIYA------------ 40 Query: 63 LHPLLDWLHYN--GFQ-VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLV 117 DW N G++ V+ + A + K+S D L +DA + S+ ++ Sbjct: 41 -----DWTKPNANGWKGVLLENAITPIQQYSYTSGKNSSDSALIIDAMDILYSQQVDGFC 95 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 I S D FT L L+ KKV + + D F+ + LK + Sbjct: 96 IVSSDSDFTRLATRLRESGKKVMGIGEKKTPLPF-----ITACDKFVYIEILKPK 145 >gi|83949890|ref|ZP_00958623.1| hypothetical protein ISM_02310 [Roseovarius nubinhibens ISM] gi|83837789|gb|EAP77085.1| hypothetical protein ISM_02310 [Roseovarius nubinhibens ISM] Length = 231 Score = 52.1 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 16/84 (19%), Positives = 30/84 (35%), Gaps = 7/84 (8%) Query: 99 DVELAVDAFEQSE--GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156 D+ L +DA + + V+ S D FT L + L+ + +V + + Sbjct: 77 DIALVIDAMDLMHTGRFDGFVLVSSDSDFTRLASRLREQGLEVFGIGARK-----TPEAF 131 Query: 157 RRQADYFMDLAYLKNEIARDPDED 180 R+ F+ L L + Sbjct: 132 RKACKRFIYLENLGGAPETESRAP 155 >gi|317471517|ref|ZP_07930868.1| hypothetical protein HMPREF1011_01216 [Anaerostipes sp. 3_2_56FAA] gi|316901012|gb|EFV22975.1| hypothetical protein HMPREF1011_01216 [Anaerostipes sp. 3_2_56FAA] Length = 351 Score = 52.1 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 63/184 (34%), Gaps = 33/184 (17%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRK-LLKAFRSRAIVIRAYYYTTVVGDPEQQ 59 M + ++ AL ID N+ S+K Y K +L + Y Sbjct: 1 MENKEKRFALLIDADNI--SAK-------YIKPILDELSQYGNITYKRIY-------GDW 44 Query: 60 FSPLH-PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHL 116 S LH + L N ++F+ G+ D + +DA + + ++ Sbjct: 45 TSTLHASWKEELLANSIT----PIQQFSYTQGKNAT----DSAMIIDAMDILYANRVDGF 96 Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 I S D FT L + ++ V + + P+ R+ D F +L L + Sbjct: 97 CIVSSDSDFTRLASRIRETGLTVIGMGEGKTPPAF-----RKACDVFTNLELLIEDKEEK 151 Query: 177 PDED 180 + Sbjct: 152 ESKP 155 >gi|222112194|ref|YP_002554458.1| hypothetical protein Dtpsy_3025 [Acidovorax ebreus TPSY] gi|221731638|gb|ACM34458.1| protein of unknown function DUF88 [Acidovorax ebreus TPSY] Length = 285 Score = 52.1 bits (124), Expect = 4e-05, Method: Composition-based stats. Identities = 34/175 (19%), Positives = 52/175 (29%), Gaps = 31/175 (17%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M + + +IAL ID N A ID ++L + + Y Sbjct: 1 MAERQLRIALLIDADN------APADKID--EILTELSTLGEINVRRAYGNWTKS----- 47 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSM-DVELAVDAFEQ--SEGLEHLV 117 G+Q + + D+ + VDA E SE + Sbjct: 48 ----------GLGGWQQRLLEFAIRPIQQFDYSKRKNATDMAMTVDAMELLYSERPDAFG 97 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 + S D FT LV L+ K V + F+ L L +E Sbjct: 98 LVSSDADFTPLVMHLRAKGSAVYGFGAAQTPKPFV-----NACSRFLYLESLVSE 147 >gi|160896833|ref|YP_001562415.1| hypothetical protein Daci_1386 [Delftia acidovorans SPH-1] gi|160362417|gb|ABX34030.1| protein of unknown function DUF88 [Delftia acidovorans SPH-1] Length = 303 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 37/173 (21%), Positives = 59/173 (34%), Gaps = 29/173 (16%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M +P+ +IAL ID N A ID ++L + ++ Y Sbjct: 1 MPEPQPRIALLIDADN------APAEMID--EILTELSTFGVIDIRRAY--GNWTKHSLS 50 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118 LLD+ + ++F + K++ D+ + VDA E +E + I Sbjct: 51 GWQRKLLDF--------ALRPMQQFD----YSKHKNATDMAMTVDAMELLYTERPDAFGI 98 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 S D FT LV L+ K V + F+ L L Sbjct: 99 VSSDADFTPLVMHLRSKGAAVYGFGMAQTPQPFV-----NACSRFLYLEALGE 146 >gi|50955250|ref|YP_062538.1| hypothetical protein Lxx16560 [Leifsonia xyli subsp. xyli str. CTCB07] gi|50951732|gb|AAT89433.1| conserved hypothetical protein [Leifsonia xyli subsp. xyli str. CTCB07] Length = 362 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 66/207 (31%), Gaps = 49/207 (23%) Query: 1 MFDPRE-KIALFIDGANLY---------------------------ASSKALGFDIDYRK 32 M +P + ++A++ID N+ ++K +D Sbjct: 10 MSEPGDGRVAVYIDFDNIVISRYDQVHGRGQFMRDKQKTGALPKPAFAAKLAEARVDLGA 69 Query: 33 LLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRK 92 ++ S ++ Y ++ Q+V + Sbjct: 70 IIDFASSFGTIVLTRAYADWSSAVNAEYRG-------------QLVGRAVDLVQLFPAAA 116 Query: 93 RVKSSMDVELAVDAFE---QSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDP 149 K+ D+ LAVD E + L H+VI +GD + L ++R + V + Sbjct: 117 YGKNGGDIRLAVDTVEDLFRLPELTHVVIVAGDSDYIPLAQRIKRLGRYV----IGIGIA 172 Query: 150 SMASDQLRRQADYFMDLAYLKNEIARD 176 + L D F+ L IARD Sbjct: 173 GSTARSLAAACDEFVSYDDLPG-IARD 198 >gi|224000195|ref|XP_002289770.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220974978|gb|EED93307.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 735 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 30/174 (17%), Positives = 55/174 (31%), Gaps = 46/174 (26%) Query: 7 KIALFIDGANLYAS--SKA-----------LGFDIDYRKLLKAFRS-------------- 39 K LFIDG LY S ++ G+ +Y+ A Sbjct: 162 KAMLFIDGTWLYYSLHARNANRCPIVPRFGQGWQSNYKVDWLALPRLICEQIDKQRNSQT 221 Query: 40 -------RAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRK 92 + R +T+ + + + + + V G K Sbjct: 222 SFKGSDRPLEISRVMVFTSAKKETDPNSIRMRMF-REMSNANYDVHMMETV----GQGEK 276 Query: 93 RVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVS 143 V D++LAV+ + + ++ +GD F + ++K K+V I S Sbjct: 277 CV----DIQLAVEMLHYATVPNAYDVAILLTGDKDFVPALVRTRQKGKQVVICS 326 >gi|220903862|ref|YP_002479174.1| hypothetical protein Ddes_0587 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868161|gb|ACL48496.1| protein of unknown function DUF88 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 240 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 34/166 (20%), Positives = 60/166 (36%), Gaps = 37/166 (22%) Query: 9 ALFIDGANLYA--------SSKALGFDIDYR----------KLLKAFRSRAIVIRAYYYT 50 AL++D N++ +++A G YR ++L R +++ Y Sbjct: 13 ALYVDFDNIFTRFLEIDPEAARAFGAT-PYRWVRWIENHALRILYGEGVRRRILKRMCYL 71 Query: 51 TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAF--- 107 + + FQVV R K+S D+ L +D Sbjct: 72 --------NPQRYQEFRNSFIRSAFQVVDCP-------PLTSRGKTSTDIHLVMDCMDDL 116 Query: 108 EQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMAS 153 S + +I SGD FT L+ LQ ++ ++S S P+ + Sbjct: 117 SHSTKFDEFIILSGDADFTPLLIRLQEHARRTLVLSVGYSSPAYTA 162 >gi|289677366|ref|ZP_06498256.1| hypothetical protein PsyrpsF_29051 [Pseudomonas syringae pv. syringae FF5] gi|330897316|gb|EGH28735.1| hypothetical protein PSYJA_07026 [Pseudomonas syringae pv. japonica str. M301072PT] gi|330981730|gb|EGH79833.1| hypothetical protein PSYAP_24706 [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 264 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 18/100 (18%), Positives = 39/100 (39%), Gaps = 7/100 (7%) Query: 76 QVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQ 133 +V+ + + + + K++ D L +DA + + + + S D FT L + L+ Sbjct: 59 KVLLDYSIQPIQQFAYTKGKNATDSSLIIDAMDLLYTRRFDGFCLVSSDSDFTRLASRLR 118 Query: 134 RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 + V + + D F+ + L+ EI Sbjct: 119 EEGLTVYGFGEEKTPKPFVA-----ACDKFIYIELLREEI 153 >gi|330943326|gb|EGH45703.1| hypothetical protein PSYPI_26719 [Pseudomonas syringae pv. pisi str. 1704B] Length = 179 Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 18/100 (18%), Positives = 39/100 (39%), Gaps = 7/100 (7%) Query: 76 QVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQ 133 +V+ + + + + K++ D L +DA + + + + S D FT L + L+ Sbjct: 59 KVLLDYSIQPIQQFAYTKGKNATDSSLIIDAMDLLYTRRFDGFCLVSSDSDFTRLASRLR 118 Query: 134 RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 + V + + D F+ + L+ EI Sbjct: 119 EEGLTVYGFGEEKTPKPFVA-----ACDKFIYIELLREEI 153 >gi|296171006|ref|ZP_06852490.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894402|gb|EFG74150.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 214 Score = 51.7 bits (123), Expect = 5e-05, Method: Composition-based stats. Identities = 27/144 (18%), Positives = 54/144 (37%), Gaps = 19/144 (13%) Query: 8 IALFIDGANLYA-----SSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 +A+++DG NLY S + + +D L + R ++ + + Y+T V + + Sbjct: 13 LAVYVDGFNLYHGLHEASGRKHLW-LDVVALAQNLRPQSSLAKVMYFTAPVLNDSGGLAR 71 Query: 63 LHPLLDWLHYNG----------FQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE- 111 L+ L +Q K K+ N R + DV +A++ + Sbjct: 72 QQRYLNALKAQNPGVIEIVEGRYQQKNKTCKK-CGNTWRTYEEKETDVNIAINLVADASI 130 Query: 112 -GLEHLVIFSGDGCFTTLVAALQR 134 + +I S D V ++ Sbjct: 131 KLTDAALIISADSDLAPGVKLARK 154 >gi|66046764|ref|YP_236605.1| hypothetical protein Psyr_3535 [Pseudomonas syringae pv. syringae B728a] gi|63257471|gb|AAY38567.1| conserved hypothetical protein [Pseudomonas syringae pv. syringae B728a] gi|330973591|gb|EGH73657.1| hypothetical protein PSYAR_24186 [Pseudomonas syringae pv. aceris str. M302273PT] Length = 264 Score = 51.7 bits (123), Expect = 5e-05, Method: Composition-based stats. Identities = 20/108 (18%), Positives = 41/108 (37%), Gaps = 7/108 (6%) Query: 76 QVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQ 133 +V+ + + + + K++ D L +DA + + + + S D FT L + L+ Sbjct: 59 KVLLDYSIQPIQQFAYTKGKNATDSSLIIDAMDLLYTRRFDGFCLVSSDSDFTRLASRLR 118 Query: 134 RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 + V + + D F+ + L+ EIA D Sbjct: 119 EEGLTVYGFGEEKTPKPFVA-----ACDKFIYIELLREEIAVPASADP 161 >gi|220928157|ref|YP_002505066.1| hypothetical protein Ccel_0707 [Clostridium cellulolyticum H10] gi|219998485|gb|ACL75086.1| protein of unknown function DUF88 [Clostridium cellulolyticum H10] Length = 258 Score = 51.7 bits (123), Expect = 5e-05, Method: Composition-based stats. Identities = 31/177 (17%), Positives = 60/177 (33%), Gaps = 31/177 (17%) Query: 1 MFDPREKIALFIDGANL-YASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59 M ++A+ ID N+ Y++ K +++ Y + Sbjct: 1 MSPDEMRLAVLIDAENVPYSNVKG---------IMEEIAKHGTPTLKRIYA------DWT 45 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLV 117 + + L N ++++ G K+S D + +DA + S+ +E Sbjct: 46 KPTMSGWKNVLLENAIT----PIQQYSYTSG----KNSSDSAMIIDAMDILYSDQVEGFC 97 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 I S D FT LV L+ KKV + + + D F + + + Sbjct: 98 IVSSDSDFTRLVTRLREAGKKVYGIGERKTPSPFIA-----ACDKFTYIEIISASLQ 149 >gi|302188168|ref|ZP_07264841.1| hypothetical protein Psyrps6_17563 [Pseudomonas syringae pv. syringae 642] Length = 264 Score = 51.7 bits (123), Expect = 5e-05, Method: Composition-based stats. Identities = 18/100 (18%), Positives = 39/100 (39%), Gaps = 7/100 (7%) Query: 76 QVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQ 133 +V+ + + + + K++ D L +DA + + + + S D FT L + L+ Sbjct: 59 KVLLDYSIQPIQQFAYTKGKNATDSSLIIDAMDLLYTRRFDGFCLVSSDSDFTRLASRLR 118 Query: 134 RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 + V + + D F+ + L+ EI Sbjct: 119 EEGLTVYGFGEEKTPKPFVA-----ACDKFIYIELLREEI 153 >gi|46580394|ref|YP_011202.1| hypothetical protein DVU1985 [Desulfovibrio vulgaris str. Hildenborough] gi|120602234|ref|YP_966634.1| hypothetical protein Dvul_1187 [Desulfovibrio vulgaris DP4] gi|46449811|gb|AAS96461.1| conserved domain protein [Desulfovibrio vulgaris str. Hildenborough] gi|120562463|gb|ABM28207.1| conserved hypothetical protein [Desulfovibrio vulgaris DP4] gi|311233631|gb|ADP86485.1| hypothetical protein Deval_1329 [Desulfovibrio vulgaris RCH1] Length = 418 Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 32/167 (19%), Positives = 63/167 (37%), Gaps = 39/167 (23%) Query: 9 ALFIDGANLYA--------SSKALGFDIDYRKLLKAFRS-----------RAIVIRAYYY 49 AL++D N+Y +++ G + ++ LK R +++ Y Sbjct: 13 ALYVDFDNIYTRLREMDPETARLFGR--NPQRWLKWLEGHALKMLYGDGVRRRILKRICY 70 Query: 50 TTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVD---A 106 + + P FQVV ++ K+S D+ L +D A Sbjct: 71 L-----NPEWYQEYRPYF---IRAAFQVVDCP-------PLTQQGKTSADIHLVMDCMDA 115 Query: 107 FEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMAS 153 + + +I SGD FT L+ +Q ++ ++S + P+ A+ Sbjct: 116 LSHTTRFDEFIILSGDADFTPLLIRIQEHARRSLVLSVGYTSPAYAA 162 >gi|303246560|ref|ZP_07332839.1| protein of unknown function DUF88 [Desulfovibrio fructosovorans JJ] gi|302492270|gb|EFL52145.1| protein of unknown function DUF88 [Desulfovibrio fructosovorans JJ] Length = 283 Score = 51.3 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 39/185 (21%), Positives = 64/185 (34%), Gaps = 26/185 (14%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 +++A+F+D Y + G I RK R V T + + Sbjct: 1 MDRVAIFVDAG--YFCTGG-GSSIAGRK-----TKRREVNVKIDNTIAFLKEKSKKLSGL 52 Query: 65 PLLDWLHYNG-----------FQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--E 111 PLL Y+G + A K + +D + D E S Sbjct: 53 PLLRIYWYDGALSQNLTTEQQYIASAADVKLRLGTVNGYGEQKGVDARIVTDLTELSRLN 112 Query: 112 GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF--MDLAYL 169 + V+ +GD V Q + +V ++S S S LRR+AD + + + Sbjct: 113 AICDAVLLAGDEDLRIGVELAQAQGVRVHLLSIQNSG---CSTPLRREADTCSEISIDEI 169 Query: 170 KNEIA 174 KN I+ Sbjct: 170 KNLIS 174 >gi|227502160|ref|ZP_03932209.1| conserved hypothetical protein [Corynebacterium accolens ATCC 49725] gi|227076984|gb|EEI14947.1| conserved hypothetical protein [Corynebacterium accolens ATCC 49725] Length = 391 Score = 51.3 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 29/172 (16%), Positives = 55/172 (31%), Gaps = 29/172 (16%) Query: 6 EKIALFIDGANL---YA----SSKALGFDIDYRKLLK------AFRSRAIVIRAYYYTTV 52 E+ +F+D + L + + +ID +++ + + R Y+Y + Sbjct: 3 ERTLVFVDTSYLLASFYNSWETGARAQLEIDLPEVVSTMGGMIEEQLGNPIQRQYWYDGI 62 Query: 53 VGDPEQQFSPLHPLLDWLHYN-GFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS- 110 + H L G Q+ E+ G +R + +D L D + Sbjct: 63 PD------TGPHRYQRALRTCEGVQLRTGQLIEW----GERRTQKGVDTRLVADMVMAAV 112 Query: 111 -EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161 V+ SGD +V + SM++ LR D Sbjct: 113 KNQFTDFVLVSGDADMIPGAQTAVDNGIRVHLYGF--GWDSMSA-ALRHTCD 161 >gi|302692514|ref|XP_003035936.1| hypothetical protein SCHCODRAFT_105537 [Schizophyllum commune H4-8] gi|300109632|gb|EFJ01034.1| hypothetical protein SCHCODRAFT_105537 [Schizophyllum commune H4-8] Length = 837 Score = 51.3 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 31/148 (20%), Positives = 53/148 (35%), Gaps = 24/148 (16%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 + +F D N S+ G++I R + + V Y Q + + Sbjct: 7 VGIFWDFENCRYSAGRSGYEI-ARAIEQVALEYGTVSDFNAYL-----DMQFCALPATMR 60 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEH-----LVIFSGD 122 L +G +V +C K +D L D + L+H L++ SGD Sbjct: 61 SELQSSGVALV---------DCPHNGQKDVVDQMLQTDMLAYA--LDHPAPATLILISGD 109 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPS 150 F V+ L+R+ + +V S P Sbjct: 110 RDFAYTVSVLRRR--RYEVVLLCHSQPG 135 >gi|218780432|ref|YP_002431750.1| hypothetical protein Dalk_2589 [Desulfatibacillum alkenivorans AK-01] gi|218761816|gb|ACL04282.1| conserved hypothetical protein [Desulfatibacillum alkenivorans AK-01] Length = 207 Score = 51.3 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 68/182 (37%), Gaps = 28/182 (15%) Query: 7 KIALFIDGANLYASSKA---LGFDIDYRKLLKAFRSRAIVI-RAYYYTTVVGD--PEQQF 60 + +++IDG NLY + + +D ++L VI Y+T +V +Q Sbjct: 2 RTSVYIDGFNLYYRALRGTPYKW-LDLKQLAANLLQPKHVITEIKYFTAIVSGIFDPRQP 60 Query: 61 SPLHPLLDWL------------HYNGFQVV---AKVAKEFTENCGRKRVKSSMDVELAVD 105 + L H+ V + +A+ + K + DV LAV Sbjct: 61 IRQKTYIRALESYIPEVSVHYGHFLSHTVSLPQSPLAQPPSFAKVIKTEEKGSDVNLAVH 120 Query: 106 AFEQS--EGLEHLVIFSGDGCFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADY 162 + + + ++ S D + ++ + K + ++S S +L++ A + Sbjct: 121 LLNDAWLDKYDCAIVISNDSDLAEPLRLIREQNGKLLGLLS--PLVQGHPSQELQKHA-H 177 Query: 163 FM 164 F+ Sbjct: 178 FV 179 >gi|20094200|ref|NP_614047.1| hypothetical protein MK0763 [Methanopyrus kandleri AV19] gi|19887222|gb|AAM01977.1| Uncharacterized conserved protein [Methanopyrus kandleri AV19] Length = 179 Score = 51.3 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 32/169 (18%), Positives = 60/169 (35%), Gaps = 36/169 (21%) Query: 8 IALFIDGANLYASSKALGFDID--YRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 IA+ IDG N+ L + D +++ + + + Sbjct: 24 IAMLIDGPNM------LRKEFDVSLKEVRELVEELGNIRVGLAFLNQYASD--------K 69 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDG 123 L++ + GF +DV LAV+A E S+ ++ + + + D Sbjct: 70 LIEAVANQGFVPRVIP--------------GDVDVYLAVEAMELIYSDNVDAIALMTRDT 115 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 F ++A + + K V+ V+ S L+ ADY + L K Sbjct: 116 DFLPIIAKAKEQGK----VTIVIGADPGFSTALQNAADYVIKLKPRKER 160 >gi|124265642|ref|YP_001019646.1| hypothetical protein Mpe_A0449 [Methylibium petroleiphilum PM1] gi|124258417|gb|ABM93411.1| conserved hypothetical protein [Methylibium petroleiphilum PM1] Length = 251 Score = 51.3 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 27/75 (36%), Gaps = 2/75 (2%) Query: 99 DVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156 D+ LA+DA E ++ +V+ S D F L+ L+ +V Sbjct: 74 DLALAIDAVELVLRQPVDEVVLVSSDRDFAPLIVRLRELGCRVVGYGQHGKTAQDVERDY 133 Query: 157 RRQADYFMDLAYLKN 171 R D F L + Sbjct: 134 LRVYDEFHVLGAARP 148 >gi|300710717|ref|YP_003736531.1| hypothetical protein HacjB3_06760 [Halalkalicoccus jeotgali B3] gi|299124400|gb|ADJ14739.1| hypothetical protein HacjB3_06760 [Halalkalicoccus jeotgali B3] Length = 157 Score = 51.3 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 54/162 (33%), Gaps = 31/162 (19%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 + L +DG N+ FD+D + ++ Y L+ Sbjct: 22 VGLLVDGPNV----LREEFDVDLDDVRAVGDDAGTLVATRLYL--------DEHATPGLI 69 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCF 125 G++VV +DV+LA+DA E + ++ L++ S D F Sbjct: 70 QAAEARGYEVVI--------------TSGDVDVKLAIDATELVYTDAVDTLMVVSRDTDF 115 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 ++ ++ V+ SD LR A + L Sbjct: 116 KPVLEKAAKRGIHTVAVAPGTYGR---SDALRNAAQEAVLLD 154 >gi|239944100|ref|ZP_04696037.1| hypothetical protein SrosN15_24076 [Streptomyces roseosporus NRRL 15998] gi|239990553|ref|ZP_04711217.1| hypothetical protein SrosN1_24813 [Streptomyces roseosporus NRRL 11379] gi|291447568|ref|ZP_06586958.1| conserved hypothetical protein [Streptomyces roseosporus NRRL 15998] gi|291350515|gb|EFE77419.1| conserved hypothetical protein [Streptomyces roseosporus NRRL 15998] Length = 306 Score = 51.3 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 32/188 (17%), Positives = 63/188 (33%), Gaps = 31/188 (16%) Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53 A+F+D +YA++ L FD+D L++AF +A ++R Y+Y Sbjct: 43 AIFVDAGYVYAAAGLLVTGTEDRRSFDLDAEGLIEAFIDKARTIFADSRLLRVYWY---- 98 Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112 + + K N + +D + D + Sbjct: 99 --DGARRRIHTTEQQAIAELP------DVKVRLGNLNANNQQKGVDSLIRTDLESLARHR 150 Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169 + + GD + V A Q +V + ++ ++ L + D DL + Sbjct: 151 AISDAALVGGDEDLVSAVEAAQGYGARVHLWGIEAAEGRNQAEPLLWEVDSQRTFDLDFC 210 Query: 170 KNEIARDP 177 + + R P Sbjct: 211 RPYVTRRP 218 >gi|303325412|ref|ZP_07355855.1| conserved hypothetical protein [Desulfovibrio sp. 3_1_syn3] gi|302863328|gb|EFL86259.1| conserved hypothetical protein [Desulfovibrio sp. 3_1_syn3] Length = 228 Score = 51.3 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 23/96 (23%), Positives = 37/96 (38%), Gaps = 10/96 (10%) Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAF---EQSEGLEHLV 117 + + FQVV R K+S D+ L +D S + + Sbjct: 88 QRYQEFRNPFIRSAFQVVDCP-------PLTSRGKTSTDIHLVMDCMDDLSHSTHFDEFI 140 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMAS 153 I SGD FT L+ LQ ++ ++S S P+ + Sbjct: 141 ILSGDADFTPLLIRLQEHARRTLVLSVGYSSPAYTA 176 >gi|262197445|ref|YP_003268654.1| hypothetical protein Hoch_4264 [Haliangium ochraceum DSM 14365] gi|262080792|gb|ACY16761.1| protein of unknown function DUF88 [Haliangium ochraceum DSM 14365] Length = 261 Score = 51.3 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 30/98 (30%), Gaps = 8/98 (8%) Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCG--------RKRVKSSMDVELAVDAFEQSE 111 + LD + V + + G R + +D LAVD + Sbjct: 127 YDAKRHTLDKMRRFYHAVRSSTDFIDIDERGHWKVDILRRSVQEKGIDTSLAVDMVAMLD 186 Query: 112 GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDP 149 + V+ SGD + + + K+V V Sbjct: 187 NYDVAVVLSGDADMIPSIEIAKNRCKQVAAVQFQQGQR 224 >gi|188992022|ref|YP_001904032.1| hypothetical protein xccb100_2627 [Xanthomonas campestris pv. campestris str. B100] gi|167733782|emb|CAP51987.1| Hypothetical protein xcc-b100_2627 [Xanthomonas campestris pv. campestris] Length = 266 Score = 51.3 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 12/55 (21%), Positives = 19/55 (34%), Gaps = 5/55 (9%) Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165 + + + D F+ L L+ + V IV D LR D F + Sbjct: 94 HRADTFCLVTSDSDFSYLCRKLRERGATVFIVG-----EPKTPDALRNACDQFFE 143 >gi|298674395|ref|YP_003726145.1| hypothetical protein Metev_0431 [Methanohalobium evestigatum Z-7303] gi|298287383|gb|ADI73349.1| protein of unknown function DUF88 [Methanohalobium evestigatum Z-7303] Length = 178 Score = 50.9 bits (121), Expect = 7e-05, Method: Composition-based stats. Identities = 30/170 (17%), Positives = 58/170 (34%), Gaps = 40/170 (23%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAI----VIRAYYYTTVVGDPEQQF 60 R I L +DG N+ F+++ + + ++ Y + Sbjct: 23 RRNIGLLVDGPNV----LRKEFNVNLEAIRDVLKEYGNVKIGLVFLNQYAS--------- 69 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVI 118 L++ + NGF+ V S +DV LAV+ E ++ + + Sbjct: 70 ---EKLVEAIENNGFEPVI--------------CSSDVDVRLAVEGTEMVCNPNIDTITL 112 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 + D F L+ + K+ + + S L+ ADY + L Sbjct: 113 VTRDADFKPLLNKANKHGKE----TILFGVEPGFSPALKNSADYVIMLNT 158 >gi|227329498|ref|ZP_03833522.1| hypothetical protein PcarcW_19989 [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 241 Score = 50.9 bits (121), Expect = 7e-05, Method: Composition-based stats. Identities = 35/180 (19%), Positives = 59/180 (32%), Gaps = 32/180 (17%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +EKIA+FID N A ID K+L +V Y + L Sbjct: 3 DKEKIAVFIDADN------APAKKID--KVLSELARYGVVNIRKAY------GNWKNQNL 48 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAF--EQSEGLEHLVIFSG 121 D L + + ++F G+ D+ LA+D ++ ++ + + S Sbjct: 49 KAWEDVL----HEFAIQPIQQFDLTKGKNAT----DMALAIDVMDVLYTKNVDVICLVSS 100 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY---LKNEIARDPD 178 D FT LV K V + + F+ L ++ I + Sbjct: 101 DCDFTPLVTRALADGKFVIGFGERKAPVAFV-----NSCSRFLYLDDEIGIEQPIQKQSR 155 >gi|168698676|ref|ZP_02730953.1| hypothetical cytosolic protein [Gemmata obscuriglobus UQM 2246] Length = 207 Score = 50.9 bits (121), Expect = 7e-05, Method: Composition-based stats. Identities = 28/134 (20%), Positives = 55/134 (41%), Gaps = 21/134 (15%) Query: 48 YYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSS---------- 97 Y+T G+ H L LH+ + + K K + R+R K++ Sbjct: 73 YFTAFTGNDN-VLHDAHVYLRSLHFEPY--IIKEDKGLRD---RRRSKANDAGVIEKPKG 126 Query: 98 MDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQ 155 D+ LAV E + + + + +F+ D + ++ A++R K V + ++ + + Sbjct: 127 ADIALAVRMIEDAVLDNYQIVGLFTSDADYLPVIKAVRRMGKYVVVYGF---KENLGNPE 183 Query: 156 LRRQADYFMDLAYL 169 L D F+DL Sbjct: 184 LEYVPDEFVDLGSY 197 >gi|119486459|ref|ZP_01620517.1| hypothetical protein L8106_00655 [Lyngbya sp. PCC 8106] gi|119456361|gb|EAW37492.1| hypothetical protein L8106_00655 [Lyngbya sp. PCC 8106] Length = 428 Score = 50.9 bits (121), Expect = 7e-05, Method: Composition-based stats. Identities = 38/169 (22%), Positives = 63/169 (37%), Gaps = 27/169 (15%) Query: 8 IALFIDGANL---YASSKALGFDIDYRKLLKAFRSRAIVIRAYYYT---TVVGDPEQQFS 61 +A+F D NL Y SS+ I+ L F + R + + + S Sbjct: 5 VAIFYDIENLLKGYGSSQNY---INSISLKYVFNKIKSIERVEFIAVQRAYANWSDPRLS 61 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVI 118 + ++ L + Q+ R K++ D++LAVDA + + +E VI Sbjct: 62 VMKGEINELGIDPIQIF---------GFSRNTHKNAADIQLAVDAIDLAYLRNYIEIFVI 112 Query: 119 FSGDGCFTTLVAALQRKVKKV-TIVSTVLSDPSMASDQLRRQADYFMDL 166 SGDG F+ L L K V ++ S D F+ + Sbjct: 113 VSGDGGFSALAKKLHEYGKYVIGCAYFNATNKIFES-----VCDVFIGI 156 >gi|262182985|ref|ZP_06042406.1| hypothetical protein CaurA7_03252 [Corynebacterium aurimucosum ATCC 700975] Length = 362 Score = 50.9 bits (121), Expect = 8e-05, Method: Composition-based stats. Identities = 24/124 (19%), Positives = 41/124 (33%), Gaps = 14/124 (11%) Query: 40 RAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMD 99 + R Y+Y + ++ + D G Q+ E+ G +R + ++D Sbjct: 7 GNRIHRQYWYDGIPDTGPHRYQRALRVCD-----GVQLRTGQLIEW----GERRTQKAVD 57 Query: 100 VELAVDAF--EQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLR 157 L D + V+ SGD V +V + SM+S LR Sbjct: 58 TRLVADMIVSAMKGQVTDFVLVSGDADMIPGVQEAVNNGVRVHLYGF--GWDSMSS-ALR 114 Query: 158 RQAD 161 D Sbjct: 115 HACD 118 >gi|218888135|ref|YP_002437456.1| hypothetical protein DvMF_3051 [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218759089|gb|ACL09988.1| protein of unknown function DUF88 [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 418 Score = 50.9 bits (121), Expect = 8e-05, Method: Composition-based stats. Identities = 35/166 (21%), Positives = 61/166 (36%), Gaps = 35/166 (21%) Query: 8 IALFIDGANLYASSKALGFDI------DYRKLLKAFRS-----------RAIVIRAYYYT 50 AL++D N+Y+ + DI + ++ +K R +++ Y Sbjct: 12 AALYVDFDNIYSRLREQDEDIARAFATNPQRWVKWIEGHALRMLYGDGVRRRILKRICYM 71 Query: 51 TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVD---AF 107 Q F P FQVV + K+S D+ L +D A Sbjct: 72 -----NPQCFHEFRPFF---IRAAFQVVDCP-------PLTNQGKTSADIHLVMDCMDAL 116 Query: 108 EQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMAS 153 S + +I SGD FT L+ LQ ++ ++S + P+ + Sbjct: 117 NHSTRFDEFIILSGDADFTPLLIRLQEHARRPLVLSVGYTSPAYTA 162 >gi|306834717|ref|ZP_07467784.1| conserved hypothetical protein [Corynebacterium accolens ATCC 49726] gi|304569388|gb|EFM44886.1| conserved hypothetical protein [Corynebacterium accolens ATCC 49726] Length = 384 Score = 50.9 bits (121), Expect = 8e-05, Method: Composition-based stats. Identities = 29/172 (16%), Positives = 55/172 (31%), Gaps = 29/172 (16%) Query: 6 EKIALFIDGANL---YA----SSKALGFDIDYRKLLK------AFRSRAIVIRAYYYTTV 52 E+ +F+D + L + + +ID +++ + + R Y+Y + Sbjct: 3 ERTLVFVDTSYLLASFYNSWETGARAQLEIDLPEVVSTMGGMIEEQLGNPIQRQYWYDGI 62 Query: 53 VGDPEQQFSPLHPLLDWLHYN-GFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS- 110 + H L G Q+ E+ G +R + +D L D + Sbjct: 63 PD------TGPHRYQRALRTCEGVQLRTGQLIEW----GERRTQKGVDTRLVADMVMAAV 112 Query: 111 -EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161 V+ SGD +V + SM++ LR D Sbjct: 113 KNQFTDFVLVSGDADMIPGAQTAVDNGIRVHLYGF--GWDSMSA-ALRHTCD 161 >gi|116671901|ref|YP_832834.1| hypothetical protein Arth_3359 [Arthrobacter sp. FB24] gi|116612010|gb|ABK04734.1| conserved hypothetical protein [Arthrobacter sp. FB24] Length = 404 Score = 50.9 bits (121), Expect = 8e-05, Method: Composition-based stats. Identities = 36/194 (18%), Positives = 63/194 (32%), Gaps = 36/194 (18%) Query: 1 MFDPREKIA-LFIDGANLYASS------KALG--FDIDYRKLLKAF------RSRAIVIR 45 M + + +FID L A+ +L F + Y+ L+ R ++R Sbjct: 7 MLQSMSRKSVIFIDAGFLLATGGLRVTGNSLRSAFSVQYKSLVDGIQGFVSERDSRDLLR 66 Query: 46 AYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVD 105 Y+Y D G KV G ++ +D++L +D Sbjct: 67 MYWYDAAKDG---------LFSDEHKRIGLLPGVKVRLGRMSYNGEQK---GVDLKLGLD 114 Query: 106 AFEQSEG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSM----ASDQLRRQ 159 + + + SGD V A Q KV ++ + ++ L Q Sbjct: 115 LVGVARNRSADVAYLLSGDDDLAEAVEAAQDLGMKVVLLGIENQGHRLGVTAVAEHLALQ 174 Query: 160 ADYFMDLAYLKNEI 173 D D+A L + Sbjct: 175 VD---DIATLPQTL 185 >gi|78047256|ref|YP_363431.1| hypothetical protein XCV1700 [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78035686|emb|CAJ23377.1| conserved hypothetical protein [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 266 Score = 50.9 bits (121), Expect = 8e-05, Method: Composition-based stats. Identities = 12/55 (21%), Positives = 19/55 (34%), Gaps = 5/55 (9%) Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165 + + + D F+ L L+ + V IV D LR D F + Sbjct: 94 SRADTFCLVTSDSDFSYLCRKLRERGATVFIVG-----EPKTPDALRNACDQFFE 143 >gi|269128328|ref|YP_003301698.1| hypothetical protein Tcur_4132 [Thermomonospora curvata DSM 43183] gi|268313286|gb|ACY99660.1| protein of unknown function DUF88 [Thermomonospora curvata DSM 43183] Length = 333 Score = 50.9 bits (121), Expect = 8e-05, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 60/167 (35%), Gaps = 20/167 (11%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRA-YYYTTVVGDPEQQFSPLHP 65 + A+F+D LYA+S AL LL A R + A ++ ++ Sbjct: 12 RYAVFVDAGYLYAASGAL--------LLDATSRREYRVAAEQLINALIDYAAKELRGELL 63 Query: 66 LLDWLHYNG-------FQVVAKV--AKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LE 114 + W +V+A + K N + + +D +L D + + Sbjct: 64 RVYWFDAAPRRQPTVDQRVIANLPRVKLRLGNLNAQGQQKGVDAQLRADLEALARHRAIT 123 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161 V+ +GD V A QR V + + S ++ L ++D Sbjct: 124 DAVLLAGDEDMLPAVEAAQRYGVLVHLWGVEPTHGSNQAEWLVWESD 170 >gi|330983390|gb|EGH81493.1| hypothetical protein PLA107_00070 [Pseudomonas syringae pv. lachrymans str. M301315] Length = 294 Score = 50.9 bits (121), Expect = 8e-05, Method: Composition-based stats. Identities = 19/100 (19%), Positives = 42/100 (42%), Gaps = 7/100 (7%) Query: 77 VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQR 134 V+ + A + + + K++ D+ + DA + ++ + S D FT LV L+ Sbjct: 66 VLHQHAIQPVQVFDLIKGKNASDIAMCCDAMDVLYNKPVDVFCLVSSDSDFTPLVTKLRS 125 Query: 135 KVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 + K+V V + + +F+ L + E++ Sbjct: 126 EGKQVIGVGERKAAAAFV-----DACSFFIFLDDIAAEVS 160 >gi|89070045|ref|ZP_01157376.1| hypothetical protein OG2516_09755 [Oceanicola granulosus HTCC2516] gi|89044382|gb|EAR50520.1| hypothetical protein OG2516_09755 [Oceanicola granulosus HTCC2516] Length = 238 Score = 50.9 bits (121), Expect = 8e-05, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 41/110 (37%), Gaps = 8/110 (7%) Query: 76 QVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVIFSGDGCFTTLVAALQ 133 +V A+ + K+S D+ L +DA + + V+ S D FT L + ++ Sbjct: 54 RVQAEHGIVPHHSPANTVGKNSSDISLVIDAMDLLHTGRFDGFVLISSDSDFTRLASRIR 113 Query: 134 RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI-ARDPDEDKK 182 + V + D R+ F+ L L + + P + K Sbjct: 114 EQGLDVYGIGQKK-----TPDAFRKACKRFIFLENLGAQTDEKAPRGEAK 158 >gi|51102980|gb|AAT96127.1| hypothetical protein [Pseudomonas viridiflava] Length = 186 Score = 50.9 bits (121), Expect = 8e-05, Method: Composition-based stats. Identities = 34/193 (17%), Positives = 69/193 (35%), Gaps = 45/193 (23%) Query: 11 FIDGANLYASSKA--------LG----------------FDIDYRKLLKAFRSRAIVIRA 46 ++D +N++ + LG +++DY L + A I Sbjct: 11 YVDNSNVFLEGRRASAVAKKLLGAESYIEAMNNRILDNTWNLDYGLLHQFACGDAENIGG 70 Query: 47 YYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDV--ELAV 104 + G P S H + GF+V + +N K K + + ++ Sbjct: 71 ---AKLWGSPPPSDSFWH----MVESKGFEVKT-----YEKNFAGKEKKVDVAIAHQITK 118 Query: 105 DAFE--QSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADY 162 DA+ S+G + + + +GD F +V L +V +V + P +L+ Sbjct: 119 DAYSGKISKGTDEITLVAGDKDFVPVVEDLVENGYQVHVVFWENAAP-----ELKVVCSK 173 Query: 163 FMDLAYLKNEIAR 175 F+ L + + + Sbjct: 174 FISLNPYLDNLTK 186 >gi|169236305|ref|YP_001689505.1| hypothetical protein OE3283F [Halobacterium salinarum R1] gi|167727371|emb|CAP14159.1| conserved hypothetical protein [Halobacterium salinarum R1] Length = 152 Score = 50.9 bits (121), Expect = 8e-05, Method: Composition-based stats. Identities = 33/155 (21%), Positives = 54/155 (34%), Gaps = 31/155 (20%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 +ALF+DG N+ FD+D + + + Y PL+ Sbjct: 17 VALFVDGPNV----LRDEFDVDLDDVREIAGEVGPLAVTRLYL--------DEHATPPLI 64 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCF 125 G+ V +DV+LAVDA E +G++ L + S D F Sbjct: 65 QAGEARGYDVRV--------------TSGDVDVKLAVDATELVLDDGVDVLAVASRDTDF 110 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160 + +R+ + ++ SD LR A Sbjct: 111 KPVFEQAERRGVRTLAIAPGEHGR---SDALRNAA 142 >gi|255324081|ref|ZP_05365206.1| conserved hypothetical protein [Corynebacterium tuberculostearicum SK141] gi|311740303|ref|ZP_07714134.1| conserved hypothetical protein [Corynebacterium pseudogenitalium ATCC 33035] gi|255298938|gb|EET78230.1| conserved hypothetical protein [Corynebacterium tuberculostearicum SK141] gi|311304686|gb|EFQ80758.1| conserved hypothetical protein [Corynebacterium pseudogenitalium ATCC 33035] Length = 365 Score = 50.9 bits (121), Expect = 9e-05, Method: Composition-based stats. Identities = 31/172 (18%), Positives = 57/172 (33%), Gaps = 29/172 (16%) Query: 6 EKIALFIDGANL---YA----SSKALGFDIDYRKLLK------AFRSRAIVIRAYYYTTV 52 E+ +F+D + L + + +ID +++ + + R Y+Y + Sbjct: 3 ERTLVFVDTSYLLASFYNSWETGARAQLEIDLPEVVSTMGGMIENQLGTPIQRQYWYDGI 62 Query: 53 VGDPEQQFSPLHPLLDWLHYN-GFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS- 110 + H L G Q+ E+ G +R + ++D L D + Sbjct: 63 PD------TGPHRYQRALRTCEGVQLRTGQLIEW----GERRTQKAVDTRLVADMVIAAM 112 Query: 111 -EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161 V+ SGD A +V + SM+S LR D Sbjct: 113 KGQFTDFVLVSGDADMIPGAQAAVDNGIRVHLYGF--GWDSMSS-ALRHACD 161 >gi|218779797|ref|YP_002431115.1| cold-shock DNA-binding domain protein [Desulfatibacillum alkenivorans AK-01] gi|218761181|gb|ACL03647.1| cold-shock DNA-binding domain protein [Desulfatibacillum alkenivorans AK-01] Length = 409 Score = 50.9 bits (121), Expect = 9e-05, Method: Composition-based stats. Identities = 29/161 (18%), Positives = 60/161 (37%), Gaps = 33/161 (20%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLL-------KAFRSR-----------AIVIRAYY 48 +I +F DG Y S + + R+ + +S+ V+ A+Y Sbjct: 11 RIGVFYDGNFFYHVSNYYKY-VHPRRARLSVAGIHEFIKSQVAESEGVDPRYCQVVDAHY 69 Query: 49 YTTVVGDPEQQFSPL----HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAV 104 + +G E + + + L G G + K +DV LA+ Sbjct: 70 FRGRLGAQEAEQRQVLMSERVFDEILMREGIVTHYLPL-------GARGEKG-IDVWLAL 121 Query: 105 DAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVS 143 +AFE + + +V+ +GDG + L+ + ++ ++ Sbjct: 122 EAFELTVLKHFNVVVLIAGDGDYVPLIRKINTLGTRIMVLG 162 >gi|312962938|ref|ZP_07777425.1| protein of unknown function DUF88 [Pseudomonas fluorescens WH6] gi|311282965|gb|EFQ61559.1| protein of unknown function DUF88 [Pseudomonas fluorescens WH6] Length = 246 Score = 50.5 bits (120), Expect = 9e-05, Method: Composition-based stats. Identities = 29/160 (18%), Positives = 52/160 (32%), Gaps = 29/160 (18%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 ++A+ ID N +S ++LL+ Y L Sbjct: 17 RLAVLIDADNASSSVV--------KELLEEVAKYGTATVKRAY---------GDWTTQHL 59 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGC 124 + W + K A + + + K+S D +DA + ++ ++ I S D Sbjct: 60 VGWKGHL-----HKHAIQPIQQFAYTQGKNSTDSAFIIDAMDLLYADNVDGFCIVSSDSD 114 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 FT L L+ K+V + D D F+ Sbjct: 115 FTRLATRLREAGKRVYGLGERK-----TPDAFIGACDKFI 149 >gi|21223533|ref|NP_629312.1| hypothetical protein SCO5164 [Streptomyces coelicolor A3(2)] gi|289769257|ref|ZP_06528635.1| conserved hypothetical protein [Streptomyces lividans TK24] gi|9714449|emb|CAC01365.1| hypothetical protein [Streptomyces coelicolor A3(2)] gi|289699456|gb|EFD66885.1| conserved hypothetical protein [Streptomyces lividans TK24] Length = 301 Score = 50.5 bits (120), Expect = 9e-05, Method: Composition-based stats. Identities = 35/186 (18%), Positives = 65/186 (34%), Gaps = 31/186 (16%) Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53 A+F+D LYA++ L FD+D L++A RA ++R Y+Y Sbjct: 37 AIFVDAGYLYAAAGRLVAGTEDRRAFDLDAEGLIEALIDRARNIFADSRLLRVYWY---D 93 Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112 G + + + L K N + +D + D + Sbjct: 94 GARRRIHTAEQQSIAELP---------DVKVRLGNLNANNQQKGVDSLIRTDLESLARHR 144 Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169 + + GD + V A Q +V + + ++ L + D +DL + Sbjct: 145 AISDAALLGGDEDLVSAVEAAQGFGARVHLWGIEAPEGRNQAEPLLWEVDSQRTLDLDFF 204 Query: 170 KNEIAR 175 K ++R Sbjct: 205 KPYVSR 210 >gi|256785360|ref|ZP_05523791.1| hypothetical protein SlivT_12796 [Streptomyces lividans TK24] Length = 298 Score = 50.5 bits (120), Expect = 9e-05, Method: Composition-based stats. Identities = 35/186 (18%), Positives = 65/186 (34%), Gaps = 31/186 (16%) Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53 A+F+D LYA++ L FD+D L++A RA ++R Y+Y Sbjct: 34 AIFVDAGYLYAAAGRLVAGTEDRRAFDLDAEGLIEALIDRARNIFADSRLLRVYWY---D 90 Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112 G + + + L K N + +D + D + Sbjct: 91 GARRRIHTAEQQSIAELP---------DVKVRLGNLNANNQQKGVDSLIRTDLESLARHR 141 Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169 + + GD + V A Q +V + + ++ L + D +DL + Sbjct: 142 AISDAALLGGDEDLVSAVEAAQGFGARVHLWGIEAPEGRNQAEPLLWEVDSQRTLDLDFF 201 Query: 170 KNEIAR 175 K ++R Sbjct: 202 KPYVSR 207 >gi|110668763|ref|YP_658574.1| hypothetical protein HQ2865A [Haloquadratum walsbyi DSM 16790] gi|109626510|emb|CAJ52972.1| conserved hypothetical protein [Haloquadratum walsbyi DSM 16790] Length = 219 Score = 50.5 bits (120), Expect = 9e-05, Method: Composition-based stats. Identities = 31/168 (18%), Positives = 56/168 (33%), Gaps = 31/168 (18%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 + LF+DG N+ FD+D + A Y Sbjct: 10 QSNRSVGLFVDGPNV----LREEFDVDLDDVRTAAEQFGRPAIRRLYL--------DEHA 57 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFS 120 L+ GF+V+ + +DV L+VD + + + + + I S Sbjct: 58 PSGLIQAAESRGFEVIV--------------TSTDVDVRLSVDLTKAAVTDTADIIAIVS 103 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 D F + A ++ +++ ++ SD LR AD + L Sbjct: 104 RDADFKPAIEAANSHDRRTVVIAPGVNGR---SDALRNAADTQITLGE 148 >gi|22299967|ref|NP_683214.1| hypothetical protein tll2424 [Thermosynechococcus elongatus BP-1] gi|22296152|dbj|BAC09976.1| tll2424 [Thermosynechococcus elongatus BP-1] Length = 620 Score = 50.5 bits (120), Expect = 9e-05, Method: Composition-based stats. Identities = 34/182 (18%), Positives = 66/182 (36%), Gaps = 19/182 (10%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGD---PEQQFSPL 63 K A+ D NL + G +D K+ S ++ + T +G+ + Sbjct: 160 KTAVLYDIENLVFNQ---GQRLDPAKV-NELVSLDKILESIKSTIDLGEIAIKRAYGNWQ 215 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGL---EHLVIFS 120 + L L+ + + + N ++ D++LA+DA + V+ S Sbjct: 216 NKTLQALNDQLKRSQIQPVSVYGHNRDQRNA---ADIQLALDAIDLIHHYPDINTFVLIS 272 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F ++ L+ K V + + AS ++ F+ L I P + Sbjct: 273 GDGGFGSIALRLRDYGKTVIGCAYWNA----ASLSFQKVCHQFIFLEN--PFIDSPPTTN 326 Query: 181 KK 182 + Sbjct: 327 GR 328 >gi|219667461|ref|YP_002457896.1| hypothetical protein Dhaf_1404 [Desulfitobacterium hafniense DCB-2] gi|219537721|gb|ACL19460.1| protein of unknown function DUF88 [Desulfitobacterium hafniense DCB-2] Length = 296 Score = 50.5 bits (120), Expect = 9e-05, Method: Composition-based stats. Identities = 23/146 (15%), Positives = 54/146 (36%), Gaps = 13/146 (8%) Query: 11 FIDGANLYASSKALGFDIDYRKLLKAFR---SRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 FID N++ G+++ L+++ + + + + Y D E+ + Sbjct: 28 FIDYENIWTGLFEQGYELTPEILMESIQLYAKQNDYVLSAIYLYANFDREEFWRAQTSFE 87 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDA----FEQSEGLEHLVIFSGDG 123 V + +++ DVEL ++A ++ + ++ +GDG Sbjct: 88 K------IHVYTRHVYGKNNFASTGLRRNAADVELILEAQEILLTRTATFDVFLLLTGDG 141 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDP 149 F L+ ++ K V ++ S Sbjct: 142 DFLPLLRKVRAWGKDVKVIGVKGSMH 167 >gi|218529118|ref|YP_002419934.1| hypothetical protein Mchl_1107 [Methylobacterium chloromethanicum CM4] gi|218521421|gb|ACK82006.1| conserved hypothetical protein [Methylobacterium chloromethanicum CM4] Length = 246 Score = 50.5 bits (120), Expect = 9e-05, Method: Composition-based stats. Identities = 35/187 (18%), Positives = 70/187 (37%), Gaps = 19/187 (10%) Query: 4 PREKIALFIDGANLYASSKALGFDI----DYRKLLKAF--RSRAIVIRAYYYTTVVGDPE 57 R + AL+IDG NLY S LG ++ KL ++ R ++R + T Sbjct: 10 SRIRAALYIDGFNLYHSVNDLGESFLKWCNFWKLGESIIPRQSEELVRVVFCTAYYPGDH 69 Query: 58 QQFSPLHPLLDWLHYNGFQVVA-----KVAKEFTENCGRKR-VKSSMDVELAVDAFEQS- 110 + L+ L G + + + AK ++ + + D+ LA+ ++ + Sbjct: 70 SKKIRHERLVRALKLVGVETILGHFSKEDAKCRDCGSAWQKPTEKATDINLALSVYDDAV 129 Query: 111 -EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMA-SDQLRRQADYFMDLAY 168 + ++ + + D ++ K +VS S P S + + + L Sbjct: 130 QDAMDTAYLLTADTDQAATAELFAKRFPKKKLVSV--SPPGRTHSQHILSHTPHKIALN- 186 Query: 169 LKNEIAR 175 + I R Sbjct: 187 -REHIER 192 >gi|328884857|emb|CCA58096.1| hypothetical protein SVEN_4810 [Streptomyces venezuelae ATCC 10712] Length = 322 Score = 50.5 bits (120), Expect = 9e-05, Method: Composition-based stats. Identities = 31/188 (16%), Positives = 64/188 (34%), Gaps = 31/188 (16%) Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53 A+F+D ++A++ L FD+D L++AF +A ++R Y+Y Sbjct: 58 AIFVDAGYVHAAAGLLVAGTEDRRSFDLDAEGLIEAFIDKARTIFADSRLLRVYWY---- 113 Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112 + P + K N + +D + D + Sbjct: 114 --DGARRRIHTPEQQAIAELP------DVKVRLGNLNANNQQKGVDSLIRTDLESLARHR 165 Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169 + + GD + V A Q +V + ++ ++ L + D +L + Sbjct: 166 AISDAALVGGDEDLVSAVEAAQGYGARVHLWGIEAAEGRNQAEALLWEVDSQRTFELDFC 225 Query: 170 KNEIARDP 177 + + R P Sbjct: 226 RPYVTRRP 233 >gi|241765008|ref|ZP_04763004.1| protein of unknown function DUF88 [Acidovorax delafieldii 2AN] gi|241365405|gb|EER60198.1| protein of unknown function DUF88 [Acidovorax delafieldii 2AN] Length = 358 Score = 50.5 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 32/140 (22%), Positives = 54/140 (38%), Gaps = 32/140 (22%) Query: 9 ALFIDGANLYASSKALGFDIDYRKLLKAFRSRAI-VIRAYYYTTVVGDPEQQFSPLHPLL 67 A+FID NL ++ +D+ +L R RA V+ Y V L + Sbjct: 17 AVFIDADNLNEATA-----LDH--VLTDLRHRAERVLYKRAYGRVD--------SLKGIE 61 Query: 68 DWLHYNGFQVVAKVA--KEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDG 123 L +G + V+ + K T++ L +DA E + ++ + I SGD Sbjct: 62 SVLWRHGVRPVSNMIVNKVTTDSA------------LVIDAVEAVCTQDIDTVAICSGDA 109 Query: 124 CFTTLVAALQRKVKKVTIVS 143 F L ++ + V S Sbjct: 110 DFVPLATWVRERGCHVLCFS 129 >gi|295133849|ref|YP_003584525.1| hypothetical protein ZPR_2004 [Zunongwangia profunda SM-A87] gi|294981864|gb|ADF52329.1| conserved hypothetical protein [Zunongwangia profunda SM-A87] Length = 246 Score = 50.5 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 24/108 (22%), Positives = 43/108 (39%), Gaps = 10/108 (9%) Query: 77 VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQR 134 V+ + A + G + K++ D + +DA + S ++ + S D FT L L+ Sbjct: 52 VLLENAISPIQQYGYTQGKNATDSAMIIDAMDILYSNKVDGFCLVSSDSDFTRLATRLRE 111 Query: 135 KVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182 K+V + D D F+ L LK +D +E + Sbjct: 112 AGKRVIGIGEKK-----TPDPFIVACDRFIYLEILK---TKDKEEQPE 151 >gi|294787818|ref|ZP_06753062.1| conserved hypothetical protein [Simonsiella muelleri ATCC 29453] gi|294484111|gb|EFG31794.1| conserved hypothetical protein [Simonsiella muelleri ATCC 29453] Length = 454 Score = 50.5 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 35/174 (20%), Positives = 60/174 (34%), Gaps = 30/174 (17%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M +K+A+ ID N + A DI ++L+ + Y GD Sbjct: 1 MSTSNKKLAVLIDADN----APA---DI-IDEMLEEIAKYGVASVKRIY----GDWSHGL 48 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118 S L ++ ++F G+ D+ L +DA + S + I Sbjct: 49 SKWKATL-----LPHAII--PVQQFAYTKGKNAT----DMALVIDAMDLLYSGNFDGFCI 97 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 S D FT L + L+ +T+ + RR D F+ + + E Sbjct: 98 VSSDSDFTRLASRLRESG--LTVYGFGEKK---TPESFRRACDKFVYVEIFRPE 146 >gi|146291809|ref|YP_001182233.1| hypothetical protein Sputcn32_0704 [Shewanella putrefaciens CN-32] gi|145563499|gb|ABP74434.1| protein of unknown function DUF88 [Shewanella putrefaciens CN-32] Length = 268 Score = 50.5 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 32/167 (19%), Positives = 57/167 (34%), Gaps = 29/167 (17%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 +EKIA+FID N A +K + +L ++ Y + Sbjct: 2 QNKEKIAVFIDADN--APAKK------FDVVLAELAKHGLISIRKAY------GNWKSPN 47 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 L P D L + + ++F G+ D+ L +DA + ++ ++ + + S Sbjct: 48 LKPWEDIL----HEYAIQPIQQFDLTKGKNAS----DIALVIDAMDILYTKDIDIICLIS 99 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 D FT LV K V + + F+ L Sbjct: 100 SDCDFTPLVTRALADGKTV----FGFGERKAPA-AFVNSCSRFLYLD 141 >gi|85717621|ref|ZP_01048561.1| hypothetical protein NB311A_09801 [Nitrobacter sp. Nb-311A] gi|85695548|gb|EAQ33466.1| hypothetical protein NB311A_09801 [Nitrobacter sp. Nb-311A] Length = 268 Score = 50.1 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 33/191 (17%), Positives = 67/191 (35%), Gaps = 31/191 (16%) Query: 9 ALFIDGANLYAS----SKALGFDI--DYRKLLKAFRSRA---------IVIRAYYYTTVV 53 +F+D N+++S SK + D + L AF+ + Y V Sbjct: 7 GIFLDFDNVFSSLFKQSKEAAREFATDPARWLGAFQGMQGSENDETSHNFVIRRCYMNPV 66 Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--- 110 G P +G++V+ + K+S D + +D + Sbjct: 67 GRVGNSE-PFSNFRQSFVRDGWEVIDTP-------PLTNQGKTSADTHIVMDVLDSVSHY 118 Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170 ++ V+ + D +T LV L++ +K + + + S R D +D + Sbjct: 119 PHVDEYVLMAADADYTPLVIRLRKHMKTTVVYAAMQ-----TSMAYRAACDSIIDERSML 173 Query: 171 NEIARDPDEDK 181 + + +E K Sbjct: 174 EILEQKDEETK 184 >gi|92115812|ref|YP_575541.1| hypothetical protein Nham_0180 [Nitrobacter hamburgensis X14] gi|91798706|gb|ABE61081.1| protein of unknown function DUF88 [Nitrobacter hamburgensis X14] Length = 254 Score = 50.1 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 22/88 (25%), Positives = 34/88 (38%), Gaps = 7/88 (7%) Query: 84 EFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVIFSGDGCFTTLVAALQRKVKKVTI 141 E + + K+S D+ L +DA + + + S D FT L A L+R+ Sbjct: 66 ERRDQIRAAKGKNSADMALVIDAMDLLHDGRINGFCLVSSDSDFTNLAARLRREG----- 120 Query: 142 VSTVLSDPSMASDQLRRQADYFMDLAYL 169 S D +R D F+ L L Sbjct: 121 ASVYGFGEKKTPDCFQRACDRFISLEGL 148 >gi|298245748|ref|ZP_06969554.1| protein of unknown function DUF88 [Ktedonobacter racemifer DSM 44963] gi|297553229|gb|EFH87094.1| protein of unknown function DUF88 [Ktedonobacter racemifer DSM 44963] Length = 451 Score = 50.1 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 8/73 (10%) Query: 98 MDVELAVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQ-RKVKKVTIVSTVLSDPSMAS 153 +D+ + +D E + V+ +GD FT + A L+ R K V +V P S Sbjct: 238 VDLNMLMDIIETVFDRPTISTFVLMTGDKDFTRISARLKLRLNKNVIVV----GIPGTVS 293 Query: 154 DQLRRQADYFMDL 166 L A+ F+ L Sbjct: 294 RDLISSANQFVPL 306 Score = 34.7 bits (79), Expect = 5.0, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 1/54 (1%) Query: 6 EKIALFIDGANLYASSKAL-GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ 58 E IALFID N+ S + + D ++L+ R V+ A Y PE Sbjct: 3 EDIALFIDFENIRYSMLNIQRREPDPQELIAVARRYGTVMVARAYADWSRQPEP 56 >gi|332527372|ref|ZP_08403428.1| hypothetical protein RBXJA2T_15598 [Rubrivivax benzoatilyticus JA2] gi|332111781|gb|EGJ11761.1| hypothetical protein RBXJA2T_15598 [Rubrivivax benzoatilyticus JA2] Length = 429 Score = 50.1 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 30/173 (17%), Positives = 61/173 (35%), Gaps = 32/173 (18%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSR-----AIVIRAYYYTTVVGDPEQQFS 61 K ALF+D N+++ + L D + F + A D E++ Sbjct: 2 KSALFVDFDNVFSQLRQLQPD-----AAERFARHPSEWIGWLTSALALPEPHEDGERRRL 56 Query: 62 PLHP----------LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELA---VDAFE 108 + GF++V + K+S D+ + VD + Sbjct: 57 LVRRCYLNPNWYQTYRHAFLRAGFEIVDCPPV-------TSQGKTSTDIHMVLDIVDLLQ 109 Query: 109 QSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTI--VSTVLSDPSMASDQLRRQ 159 + ++FS D FT ++ L+R ++ T+ + + ++D L + Sbjct: 110 HETRCDEFIVFSADADFTPVLRKLRRYDRRTTVLAIGFPSAAYQASADLLIDE 162 >gi|291276906|ref|YP_003516678.1| hypothetical protein HMU06860 [Helicobacter mustelae 12198] gi|290964100|emb|CBG39944.1| Putative hypothetical protein [Helicobacter mustelae 12198] Length = 233 Score = 50.1 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 29/139 (20%), Positives = 54/139 (38%), Gaps = 17/139 (12%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 D KIALF+D N+ ++K R++ + S V Y +P Sbjct: 2 DKERKIALFLDCENV--AAKWA------REIFERLESIGDVCIKKAY---GDWRNDALNP 50 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFS 120 + L ++ + N G K+S D+++++D + ++ +VI S Sbjct: 51 WNAELIQYAIEPIHIIT--GNHYKNNQGSG--KNSCDIKISIDIMNCLYDKIVDCIVIVS 106 Query: 121 GDGCFTTLVAALQRKVKKV 139 D F L ++ K +V Sbjct: 107 SDSDFAPLAQEIRSKGLQV 125 >gi|282865441|ref|ZP_06274493.1| hypothetical protein SACTEDRAFT_5038 [Streptomyces sp. ACTE] gi|282559914|gb|EFB65464.1| hypothetical protein SACTEDRAFT_5038 [Streptomyces sp. ACTE] Length = 303 Score = 50.1 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 33/187 (17%), Positives = 60/187 (32%), Gaps = 29/187 (15%) Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 A+F+D +YA++ L FD+D L++AF +A I A Sbjct: 40 AIFVDAGYVYAAAGLLVTGTEDRRSFDLDAEGLIEAFIDKARTIFA-----------DSR 88 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTE------NCGRKRVKSSMDVELAVDAFEQSEG-- 112 D V + E + N + +D + D + Sbjct: 89 LLRVYWYDGARRRIHTVEQQSIAELPDVKVRLGNLNANNQQKGVDSLIRSDLESLARHRA 148 Query: 113 LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYLK 170 + + GD + V A Q +V + + ++ L + D DL + + Sbjct: 149 ISDAALVGGDEDLVSAVEAAQGYGARVHLWGIEAGEGRNQAEPLLWEVDSQRTFDLDFCR 208 Query: 171 NEIARDP 177 + R P Sbjct: 209 PYVTRRP 215 >gi|319791586|ref|YP_004153226.1| hypothetical protein Varpa_0897 [Variovorax paradoxus EPS] gi|315594049|gb|ADU35115.1| protein of unknown function DUF88 [Variovorax paradoxus EPS] Length = 273 Score = 50.1 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 33/138 (23%), Positives = 55/138 (39%), Gaps = 26/138 (18%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 +A+FID NL ++ +D+ L + ++ Y G PE L + Sbjct: 15 LAVFIDADNLNDATA-----LDHVLLALRPMADRVI-----YRRAYGRPE----SLKAIH 60 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCF 125 L +G + VA + + K++ D L +DA E ++ + I SGD F Sbjct: 61 AVLWRHGVRPVANLIVD----------KTTTDSALVIDAVEAVCTNDIDIVAICSGDADF 110 Query: 126 TTLVAALQRKVKKVTIVS 143 L L+ K +V S Sbjct: 111 VPLALWLREKGCRVLCYS 128 >gi|291437417|ref|ZP_06576807.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] gi|291340312|gb|EFE67268.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] Length = 319 Score = 50.1 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 35/186 (18%), Positives = 63/186 (33%), Gaps = 31/186 (16%) Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAIVIRA-------YYYTTVV 53 A+F+D LYA++ L FD+D L+ A RA + A Y+Y Sbjct: 56 AIFVDAGYLYAAAGRLVAGTEDRRAFDLDAEGLIDALIDRARTVFADSRLLRVYWY---D 112 Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112 G + + + L K N + +D + D + Sbjct: 113 GARRRIHTAEQQSIAELP---------DVKVRLGNLNANNQQKGVDSLIRTDLESLARHR 163 Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169 + + GD + V A Q +V + + ++ L + D +DL + Sbjct: 164 AISDAALLGGDEDLVSAVEAAQGYGARVHLWGIEAPEGRNQAEPLLWEVDSQRTLDLDFF 223 Query: 170 KNEIAR 175 K ++R Sbjct: 224 KPYVSR 229 >gi|121596033|ref|YP_987929.1| hypothetical protein Ajs_3744 [Acidovorax sp. JS42] gi|120608113|gb|ABM43853.1| protein of unknown function DUF88 [Acidovorax sp. JS42] Length = 287 Score = 50.1 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 35/175 (20%), Positives = 52/175 (29%), Gaps = 31/175 (17%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M + + +IAL ID N A ID ++L + + Y Sbjct: 1 MAERQLRIALLIDADN------APADKID--EILTELSTLGEINVRRAYGNWTKS----- 47 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSM-DVELAVDAFEQ--SEGLEHLV 117 G+Q + + D+ + VDA E SE + Sbjct: 48 ----------GLGGWQQRLLEFAIRPIQQFDYSKRKNATDMAMTVDAMELLYSERPDAFG 97 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 I S D FT LV L+ K V + F+ L L +E Sbjct: 98 IVSSDADFTPLVMHLRAKGSAVYGFGAAQTPKPFV-----NACSRFLYLESLVSE 147 >gi|255065206|ref|ZP_05317061.1| conserved hypothetical protein [Neisseria sicca ATCC 29256] gi|255050627|gb|EET46091.1| conserved hypothetical protein [Neisseria sicca ATCC 29256] Length = 390 Score = 50.1 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 37/177 (20%), Positives = 60/177 (33%), Gaps = 30/177 (16%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 +K+A+ ID N + A DI +LL+ I Y GD S Sbjct: 6 NKKLAVLIDADN----APA---DI-IDRLLEEVAKYGIASVKRIY----GDWSHGLSKWK 53 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGD 122 L ++ ++F G+ D+ L +DA + S + I S D Sbjct: 54 AAL-----LPHAII--PVQQFAYTKGKNAT----DMALVIDAMDLLYSGNFDGFCIVSSD 102 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 FT L + L+ +T+ + R+ D F+ + E R E Sbjct: 103 SDFTRLASRLRESG--LTVYGFGEKK---TPEAFRKACDKFIYTEIFRPEKQRQEKE 154 >gi|182436154|ref|YP_001823873.1| hypothetical protein SGR_2361 [Streptomyces griseus subsp. griseus NBRC 13350] gi|178464670|dbj|BAG19190.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus NBRC 13350] Length = 303 Score = 50.1 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 31/188 (16%), Positives = 63/188 (33%), Gaps = 31/188 (16%) Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53 A+F+D +YA++ L FD+D L++AF +A ++R Y+Y Sbjct: 40 AIFVDAGYVYAAAGLLVTGTEDRRSFDLDAEGLIEAFIDKARTIFADSRLLRVYWY---- 95 Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112 + + K N + +D + D + Sbjct: 96 --DGARRRIHTTEQQAIAELP------DVKVRLGNLNANNQQKGVDSLIRTDLESLARHR 147 Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169 + + GD + V A Q +V + ++ ++ L + D +L + Sbjct: 148 AISDAALVGGDEDLVSAVEAAQGYGARVHLWGIEAAEGRNQAEPLLWEVDSQRTFELDFC 207 Query: 170 KNEIARDP 177 + + R P Sbjct: 208 RPYVTRRP 215 >gi|152965451|ref|YP_001361235.1| hypothetical protein Krad_1483 [Kineococcus radiotolerans SRS30216] gi|151359968|gb|ABS02971.1| hypothetical protein Krad_1483 [Kineococcus radiotolerans SRS30216] Length = 259 Score = 50.1 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 40/114 (35%), Gaps = 12/114 (10%) Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 L ++ L G+ V A+ ++ ++ +A + S L +V+ SG Sbjct: 77 SLRGWIEALRSFGYAVFARPKVHPEDDVDDAMLQ-----HIA--SRRASHRLRRVVVASG 129 Query: 122 DG-CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 DG F + L R +V ++S L F+DL + Sbjct: 130 DGRNFLAPLEELHRAGVRVVVLSFAEVAGYAQESPLI----EFVDLEDVPGAFQ 179 >gi|257068962|ref|YP_003155217.1| hypothetical protein Bfae_18070 [Brachybacterium faecium DSM 4810] gi|256559780|gb|ACU85627.1| Protein of unknown function DUF88 [Brachybacterium faecium DSM 4810] Length = 335 Score = 50.1 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 35/199 (17%), Positives = 63/199 (31%), Gaps = 26/199 (13%) Query: 3 DPREKIALFIDGANLYAS--SKALGFDIDYRKLLKAFRSRA-------IVIRAYYYTTVV 53 ++A+++D N+ S + G Y + + + +A V Sbjct: 4 SQDPRVAVYLDFDNIVMSWYDRVHGRQA-YSRDRQRIAEDPTEPEIAERLAKATVDVGAV 62 Query: 54 GDPEQQFSPL---HPLLDWLHYNGFQVVAKVAKEFTE----NCGRKRVKSSMDVELAVDA 106 D F L DW +++ + K+ D+ LAVD Sbjct: 63 IDYAASFGSLMLTRAYADWSSPVNAIYRSQLVARAVDLVQLFPAAAYAKNGADIRLAVDT 122 Query: 107 FE---QSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163 E L H+VI +GD + L +R + V + + L D F Sbjct: 123 VEDLYLMPDLTHVVIVAGDSDYVPLAQRCRRLGRYV----IAMGVAGSTAKSLAAACDEF 178 Query: 164 MDLAYLKNEIARDPDEDKK 182 L + R P + ++ Sbjct: 179 ESYENLPG-VER-PTKPQR 195 >gi|326776780|ref|ZP_08236045.1| Domain of unknown function DUF88 protein [Streptomyces cf. griseus XylebKG-1] gi|326657113|gb|EGE41959.1| Domain of unknown function DUF88 protein [Streptomyces cf. griseus XylebKG-1] Length = 303 Score = 50.1 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 31/188 (16%), Positives = 63/188 (33%), Gaps = 31/188 (16%) Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53 A+F+D +YA++ L FD+D L++AF +A ++R Y+Y Sbjct: 40 AIFVDAGYVYAAAGLLVTGTEDRRSFDLDAEGLIEAFIDKARTIFADSRLLRVYWY---- 95 Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112 + + K N + +D + D + Sbjct: 96 --DGARRRIHTTEQQAIAELP------DVKVRLGNLNANNQQKGVDSLIRTDLESLARHR 147 Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169 + + GD + V A Q +V + ++ ++ L + D +L + Sbjct: 148 AISDAALVGGDEDLVSAVEAAQGYGARVHLWGIEAAEGRNQAEPLLWEVDSQRTFELDFC 207 Query: 170 KNEIARDP 177 + + R P Sbjct: 208 RPYVTRRP 215 >gi|323359351|ref|YP_004225747.1| hypothetical protein MTES_2903 [Microbacterium testaceum StLB037] gi|323275722|dbj|BAJ75867.1| uncharacterized conserved protein [Microbacterium testaceum StLB037] Length = 286 Score = 50.1 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 29/139 (20%), Positives = 45/139 (32%), Gaps = 20/139 (14%) Query: 28 IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTE 87 ID ++ S ++ Y ++ Q+VA+ Sbjct: 57 IDVGAVIDYAASFGTLVLTRAYADWSAPVNAEYRS-------------QLVARAVDLVQL 103 Query: 88 NCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVST 144 K+ D+ LAVDA E L H+VI +GD + L +R + V V Sbjct: 104 FPAAAYAKNGADIRLAVDAVEDMFRLPDLTHVVIVAGDSDYVPLAQRCKRLGRYVVGVGV 163 Query: 145 VLSDPSMASDQLRRQADYF 163 S + L D F Sbjct: 164 AGS----TAKSLAAACDRF 178 >gi|167746693|ref|ZP_02418820.1| hypothetical protein ANACAC_01404 [Anaerostipes caccae DSM 14662] gi|167653653|gb|EDR97782.1| hypothetical protein ANACAC_01404 [Anaerostipes caccae DSM 14662] Length = 351 Score = 50.1 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 63/184 (34%), Gaps = 33/184 (17%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRK-LLKAFRSRAIVIRAYYYTTVVGDPEQQ 59 M + ++ AL ID N+ S+K Y K +L + Y Sbjct: 1 MENKEKRFALLIDADNI--SAK-------YIKPILDELSQYGNITYKRIY-------GDW 44 Query: 60 FSPLH-PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHL 116 S LH + L N ++F+ G+ D + +DA + + ++ Sbjct: 45 TSTLHASWKEELLANSIT----PIQQFSYTQGKNAT----DSAMIIDAMDILYTNRVDGF 96 Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 I S D FT L + ++ V + + P+ R+ D F +L L + Sbjct: 97 CIVSSDSDFTRLASRIRETGLTVIGMGEGKTPPAF-----RKACDVFTNLELLIEDKEEK 151 Query: 177 PDED 180 + Sbjct: 152 ESKP 155 >gi|260804479|ref|XP_002597115.1| hypothetical protein BRAFLDRAFT_76354 [Branchiostoma floridae] gi|229282378|gb|EEN53127.1| hypothetical protein BRAFLDRAFT_76354 [Branchiostoma floridae] Length = 555 Score = 50.1 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 29/150 (19%), Positives = 59/150 (39%), Gaps = 35/150 (23%) Query: 5 REKIALFIDGANLYASSKAL-------------GFDIDYRKLLKAFRSRAI-----VIRA 46 E + +F+D +N++ + K I+Y L S+ + A Sbjct: 160 NEGLHVFVDDSNIWIAGKRAAVKQKDLACDEDPRLRIEYGNFLDVLSSKERQTSSVIKIA 219 Query: 47 YYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDA 106 Y ++ + L D + G++V KE ++ G+++ +D +L VDA Sbjct: 220 NMYGSIPPPND-------SLWDKMKEKGWKV---DLKERSKITGKEKA---VDAQLMVDA 266 Query: 107 FE-QSEGLE---HLVIFSGDGCFTTLVAAL 132 ++ + +V+ SGD F L+ + Sbjct: 267 ISFAAQRKDAGGTIVLISGDKDFLPLINKV 296 >gi|297157475|gb|ADI07187.1| hypothetical protein SBI_04066 [Streptomyces bingchenggensis BCW-1] Length = 310 Score = 50.1 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 35/189 (18%), Positives = 66/189 (34%), Gaps = 31/189 (16%) Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53 A+F+D +YA++ L F++D L++AF +A ++R Y+Y Sbjct: 41 AIFVDAGYVYAAAGRLVAGTEDRRTFELDAEGLIEAFIDKARTIFPDSRLLRVYWY---D 97 Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112 G + + + L K N + +D + D + Sbjct: 98 GARRRIHTSEQQSIAELP---------DVKVRLGNLNANNQQKGVDSLIRSDLESLARHR 148 Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169 + V+ GD + V A Q +V + + ++ L + D DL + Sbjct: 149 AIGDAVLIGGDEDLVSAVEAAQGYGARVHLWGIEAVEGRNQAEPLLWEVDSQRTFDLDFC 208 Query: 170 KNEIARDPD 178 K + R P Sbjct: 209 KPYVTRRPA 217 >gi|326204799|ref|ZP_08194653.1| protein of unknown function DUF88 [Clostridium papyrosolvens DSM 2782] gi|325985011|gb|EGD45853.1| protein of unknown function DUF88 [Clostridium papyrosolvens DSM 2782] Length = 258 Score = 49.7 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 31/177 (17%), Positives = 60/177 (33%), Gaps = 31/177 (17%) Query: 1 MFDPREKIALFIDGANL-YASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59 M ++A+ ID N+ Y++ K +++ Y + Sbjct: 1 MSPDEMRLAVLIDAENVPYSNVKG---------IMEEIARHGTPTIKRIYA------DWT 45 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLV 117 + + L N ++++ G K+S D + +DA + S+ +E Sbjct: 46 KPTMSGWKNVLLENAIT----PIQQYSYTSG----KNSSDSAMIIDAMDILYSDQVEGFC 97 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 I S D FT LV L+ KKV + + + D F + + + Sbjct: 98 IISSDSDFTRLVTRLREAGKKVYGIGERKTPSPFIA-----ACDKFTYIEIISASLQ 149 >gi|149376066|ref|ZP_01893832.1| hypothetical protein MDG893_03770 [Marinobacter algicola DG893] gi|149359703|gb|EDM48161.1| hypothetical protein MDG893_03770 [Marinobacter algicola DG893] Length = 248 Score = 49.7 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 35/183 (19%), Positives = 62/183 (33%), Gaps = 29/183 (15%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 + +KIA+ ID N S L +++ S V+ Y Sbjct: 4 LEQHKKIAVLIDADNAQLSKLPL--------IIEELSSHGHVVVKRAY---------GDW 46 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIF 119 + L +W V+ ++A + + + K++ D + +DA + S + + Sbjct: 47 SIDSLKNW-----KTVLNELAIQPIQQFAYTKGKNATDASMIIDAMDLLYSSKFDAFALV 101 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 S D FT L + L+ I + R D F+ L+ PDE Sbjct: 102 SSDSDFTKLASRLRES----EIYVFGFGEKK-TPVSFRSACDDFLFTENLEYPEEVAPDE 156 Query: 180 DKK 182 K Sbjct: 157 PAK 159 >gi|261364990|ref|ZP_05977873.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] gi|288566793|gb|EFC88353.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] Length = 390 Score = 49.7 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 37/177 (20%), Positives = 60/177 (33%), Gaps = 30/177 (16%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 +K+A+ ID N + A DI +LL+ I Y GD S Sbjct: 6 NKKLAVLIDADN----APA---DI-IDRLLEEVAKYGIASVKRIY----GDWSHGLSKWK 53 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGD 122 L ++ ++F G+ D+ L +DA + S + I S D Sbjct: 54 AAL-----LPHAII--PVQQFAYTKGKNAT----DMALVIDAMDLLYSGNFDGFCIVSSD 102 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 FT L + L+ +T+ + R+ D F+ + E R E Sbjct: 103 SDFTRLASRLRESG--LTVYGFGEKK---TPEAFRKACDKFIYTEIFRPEKQRQEKE 154 >gi|18978412|ref|NP_579769.1| hypothetical protein PF2040 [Pyrococcus furiosus DSM 3638] gi|18894254|gb|AAL82164.1| hypothetical protein PF2040 [Pyrococcus furiosus DSM 3638] Length = 183 Score = 49.7 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 71/179 (39%), Gaps = 32/179 (17%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 ++IALF+DG N+ K LG + +++A + A Q++P Sbjct: 26 KRIALFVDGPNILR--KELGIHL--EDIVEALSKLGNIRVAKVIL-------NQYAP-QS 73 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDG 123 L++ + GF+ V V + V++AV+A + ++ + + + + Sbjct: 74 LIEAVSNQGFEPVI--------------VAGEIGVKMAVEAMREVYNPNIDMIALATRNT 119 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182 F ++ + K K+ I+ S L+ ADY + L +I ED + Sbjct: 120 EFVPIILKAKEKGKETAIIGVEHGL----SSALKHAADYVIILKPRGEKIEERHHEDSE 174 >gi|269124499|ref|YP_003297869.1| hypothetical protein Tcur_0226 [Thermomonospora curvata DSM 43183] gi|268309457|gb|ACY95831.1| protein of unknown function DUF88 [Thermomonospora curvata DSM 43183] Length = 446 Score = 49.7 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 35/180 (19%), Positives = 65/180 (36%), Gaps = 33/180 (18%) Query: 5 REKIALFIDGANL-------YASSK---ALGFDIDYRKLLKAFRSRAI------VIRAYY 48 ++ ALF+D L ++ A+ + D+ LL+ + ++R Y+ Sbjct: 1 MDRCALFVDAGYLLADGAMAVHGTRHREAVSW--DFAGLLQLLSNLGRERTGLPLLRCYW 58 Query: 49 YTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE 108 Y V + SP H L L + R + +D E+ D Sbjct: 59 YEATVEG---RRSPEHEALADL----------PGLKLRLGRIRPGRREGVDAEIQRDLMT 105 Query: 109 QSEG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 + + V+ GD +VA Q +VT+V + S LR++ D +++ Sbjct: 106 LARNRAIADAVLVGGDEDMAPVVAEAQEFGVRVTVVHVAVDGNWTISRVLRQECDDLIEI 165 >gi|189462157|ref|ZP_03010942.1| hypothetical protein BACCOP_02839 [Bacteroides coprocola DSM 17136] gi|189431130|gb|EDV00115.1| hypothetical protein BACCOP_02839 [Bacteroides coprocola DSM 17136] Length = 213 Score = 49.7 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 26/154 (16%), Positives = 54/154 (35%), Gaps = 14/154 (9%) Query: 3 DPREKIALFIDGANLYASSKAL-GFD----IDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 + ++++ ++IDG N Y K+ + +D KL + F + A Y + D Sbjct: 2 EQKQRVIVYIDGFNFYFGLKSNAKWKKYYWLDIVKLFEMFMRPNQELVAVKYFSAKPDDI 61 Query: 58 QQFSPLHPLLDWLHYNG-FQVVA-KVAKEFTE-----NCGRKRVKSSMDVELAVDAFEQS 110 Q + N F+++ K K+ N + DV +A + Sbjct: 62 DQSLRQNAFFQANRENPKFKLILGKYLKKSITCFKCGNVIHTHEEKETDVRIATQIIADA 121 Query: 111 --EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIV 142 + + ++ S D + +KV + Sbjct: 122 YQKNCDISIVVSADSDMIPAIELATEACQKVFVY 155 >gi|332296842|ref|YP_004438764.1| protein of unknown function DUF88 [Treponema brennaborense DSM 12168] gi|332179945|gb|AEE15633.1| protein of unknown function DUF88 [Treponema brennaborense DSM 12168] Length = 332 Score = 49.7 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 6/80 (7%) Query: 93 RVKSSMDVELA---VDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDP 149 K S D+ + V+ Q +E V+ +GD F L+ +L++ K+ I+ V ++ Sbjct: 72 SRKDSADMSMVAHGVELIFQYPHIESYVLITGDADFRPLLLSLRKYGKQTLIICDVKNN- 130 Query: 150 SMASDQLRRQADYFMDLAYL 169 AS+ L AD ++D + Sbjct: 131 --ASEDLLNMADKYLDYREI 148 >gi|329847705|ref|ZP_08262733.1| hypothetical protein ABI_07730 [Asticcacaulis biprosthecum C19] gi|328842768|gb|EGF92337.1| hypothetical protein ABI_07730 [Asticcacaulis biprosthecum C19] Length = 145 Score = 49.7 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 56/164 (34%), Gaps = 31/164 (18%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 K+AL +DG N+ G + L K + + Y P+ + Sbjct: 4 KLALLVDGDNI-------GHQL-IAPLWKQVVTLGMPNVQRVYRDWSRGPDWKD------ 49 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGC 124 V+ K A + K++ D+ + +DA + ++ + + S D Sbjct: 50 ----------VLLKYALQPMHQFNYAPGKNATDIAMVIDALDLAQTGLYDGFCLASSDSD 99 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 FT L L+++ KV + ++ D F+ L Sbjct: 100 FTPLAIRLRQRGLKV--YGFGETKTPAT---FQQACDRFIILPS 138 >gi|115526363|ref|YP_783274.1| hypothetical protein RPE_4370 [Rhodopseudomonas palustris BisA53] gi|115520310|gb|ABJ08294.1| protein of unknown function DUF88 [Rhodopseudomonas palustris BisA53] Length = 253 Score = 49.7 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 20/100 (20%), Positives = 40/100 (40%), Gaps = 7/100 (7%) Query: 76 QVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQ 133 +++ K A + + + K++ D+ L +DA + S + + S D FT L + L+ Sbjct: 56 EILQKHAIDPYQQYAYTKGKNASDIALVIDAMDLLHSGRFDGFCLVSSDSDFTRLASRLR 115 Query: 134 RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 + V T + R+ F+ L E+ Sbjct: 116 EQGADVYGFGTQC-----TPESFRQACRRFIYTENLLPEV 150 >gi|257063827|ref|YP_003143499.1| hypothetical protein Shel_11150 [Slackia heliotrinireducens DSM 20476] gi|256791480|gb|ACV22150.1| uncharacterized conserved protein [Slackia heliotrinireducens DSM 20476] Length = 314 Score = 49.7 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 36/165 (21%), Positives = 55/165 (33%), Gaps = 29/165 (17%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 KIAL IDG N+ S+ +G +L Y + + Sbjct: 5 KIALLIDGDNV--SANYIG------SILDELTETGTTTIKRIY------GDWTRPEMRSW 50 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGC 124 D L G V + ++F+ G+ D L +DA + ++ I S D Sbjct: 51 RDQL--LGRSV--QPVQQFSNVSGKNAT----DSALIIDAMDILYGRDVDAFCIVSSDSD 102 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 FT L + L K V + D R F++L L Sbjct: 103 FTRLASRLTESGKVV-----IGMGEEKTPDAFRNACTKFVNLENL 142 >gi|255536314|ref|YP_003096685.1| Maebl [Flavobacteriaceae bacterium 3519-10] gi|255342510|gb|ACU08623.1| Maebl [Flavobacteriaceae bacterium 3519-10] Length = 246 Score = 49.4 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 36/188 (19%), Positives = 62/188 (32%), Gaps = 40/188 (21%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 +K+A+ ID N+ + + ++L+ Y Sbjct: 3 DDKLAVLIDADNVPYA--------NVTQMLEEISRYGTPTIKRIYA-------------- 40 Query: 65 PLLDWLHY--NGFQ-VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIF 119 DW +G++ V+ + A + K+S D L +DA + SE + I Sbjct: 41 ---DWTKPTVSGWKGVLLENAITPIQQYSYTTGKNSSDSALIIDAMDILYSEKVTGFCIV 97 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE-----IA 174 S D FT L L+ V + S D F+ L LKN + Sbjct: 98 SSDSDFTRLATRLREAGMTVIGFGEKKTPKPFIS-----ACDKFIYLEILKNTATETAVE 152 Query: 175 RDPDEDKK 182 + + K+ Sbjct: 153 KKTAKPKR 160 >gi|14590028|ref|NP_142092.1| hypothetical protein PH0074 [Pyrococcus horikoshii OT3] gi|3256460|dbj|BAA29143.1| 163aa long hypothetical protein [Pyrococcus horikoshii OT3] Length = 163 Score = 49.4 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 34/168 (20%), Positives = 61/168 (36%), Gaps = 36/168 (21%) Query: 8 IALFIDGANLYASSKALGFDI-DYRKLLKAFRS-RAIVIRAYYYTTVVGDPEQQFSPLHP 65 I L IDG N+ K G + D +K L+ R + Y Sbjct: 24 IGLIIDGPNILR--KEFGIKLEDIKKALEKIGKIRVAKVVLNQYAP------------QG 69 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDG 123 L++ + GF+ + V DV +A++A E ++ + + + D Sbjct: 70 LIEAVVNQGFEPII--------------VAGDTDVRVAIEAMELIYNTDVDVIALATRDA 115 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 F L++ +RK K+ ++ S L+ ADY + + K Sbjct: 116 DFLPLISEAKRKGKETVVIGVEPGF----SVALQNAADYIIKMEKKKE 159 >gi|239929080|ref|ZP_04686033.1| hypothetical protein SghaA1_12721 [Streptomyces ghanaensis ATCC 14672] Length = 297 Score = 49.4 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 35/186 (18%), Positives = 63/186 (33%), Gaps = 31/186 (16%) Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAIVIRA-------YYYTTVV 53 A+F+D LYA++ L FD+D L+ A RA + A Y+Y Sbjct: 34 AIFVDAGYLYAAAGRLVAGTEDRRAFDLDAEGLIDALIDRARTVFADSRLLRVYWY---D 90 Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112 G + + + L K N + +D + D + Sbjct: 91 GARRRIHTAEQQSIAELP---------DVKVRLGNLNANNQQKGVDSLIRTDLESLARHR 141 Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169 + + GD + V A Q +V + + ++ L + D +DL + Sbjct: 142 AISDAALLGGDEDLVSAVEAAQGYGARVHLWGIEAPEGRNQAEPLLWEVDSQRTLDLDFF 201 Query: 170 KNEIAR 175 K ++R Sbjct: 202 KPYVSR 207 >gi|153854120|ref|ZP_01995428.1| hypothetical protein DORLON_01419 [Dorea longicatena DSM 13814] gi|149753169|gb|EDM63100.1| hypothetical protein DORLON_01419 [Dorea longicatena DSM 13814] Length = 309 Score = 49.4 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 38/167 (22%), Positives = 60/167 (35%), Gaps = 31/167 (18%) Query: 9 ALFIDGANLYASSKALGFDIDYRK-LLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 AL ID N+ S+K Y K +L I+ Y + + Sbjct: 7 ALLIDADNV--SAK-------YIKPILTELSKYGIITYKRIY------GDWTSTQHSSWK 51 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCF 125 D L N ++F+ G K+S D + +DA + + ++ I S D F Sbjct: 52 DELLTNSIT----PIQQFSYTQG----KNSTDSAMIIDAMDILYTNDVDGFCIVSSDSDF 103 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 T LV+ L+ K V + + R+ D F L L +E Sbjct: 104 TRLVSRLRESGKMVIGMGENKTPEPF-----RKACDKFTILENLMSE 145 >gi|126729949|ref|ZP_01745761.1| hypothetical protein SSE37_16263 [Sagittula stellata E-37] gi|126709329|gb|EBA08383.1| hypothetical protein SSE37_16263 [Sagittula stellata E-37] Length = 233 Score = 49.4 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 25/115 (21%), Positives = 47/115 (40%), Gaps = 10/115 (8%) Query: 73 NGF-QVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLV 129 NG+ +V A+ + K++ D+ L +DA + E + V+ S D FT L Sbjct: 50 NGWSRVTAEYGLVPLHSPANTVGKNASDISLVIDAMDLMHTERFDGFVLVSSDSDFTRLA 109 Query: 130 AALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL--KNEIARDPDEDKK 182 + ++ + V + D R+ F+ L + E ++D DK+ Sbjct: 110 SRIREQGLDVYGMGMQK-----TPDAFRKACKRFIYLENIDSAPEESKDRKTDKR 159 >gi|114564810|ref|YP_752324.1| hypothetical protein Sfri_3658 [Shewanella frigidimarina NCIMB 400] gi|114336103|gb|ABI73485.1| protein of unknown function DUF88 [Shewanella frigidimarina NCIMB 400] Length = 242 Score = 49.4 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 60/179 (33%), Gaps = 36/179 (20%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 ++KIA+FID N A ID K+L +V Y + + L Sbjct: 3 DKDKIAVFIDADN------APAKKID--KVLSELARYGVVNIRKAY------GNWKNANL 48 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAF--EQSEGLEHLVIFSG 121 D L + + ++F G+ D+ L +D ++ ++ + + S Sbjct: 49 KTWEDVL----HEYAIQPIQQFDLTKGKNAT----DMALVIDVMDVLYTKDVDVICLVSS 100 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 D FT LV K TI+ M F+ L DP ED Sbjct: 101 DCDFTPLVTRALADGK--TIIGFGERKAPMP---FVNSCSRFLFLDD-------DPSED 147 >gi|212637199|ref|YP_002313724.1| hypothetical protein swp_4494 [Shewanella piezotolerans WP3] gi|212558683|gb|ACJ31137.1| Conserved hypothetical protein [Shewanella piezotolerans WP3] Length = 245 Score = 49.4 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 36/181 (19%), Positives = 63/181 (34%), Gaps = 31/181 (17%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +EKIALFID N A+ +D +L +V Y + S + Sbjct: 5 DKEKIALFIDADNAPAA------KVD--VILSELAKYGVVNIRRAY------GNWKSSNI 50 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSG 121 P D L + + ++F G+ D+ L +DA + ++ ++ + + S Sbjct: 51 KPWEDVL----HEYAIQPIQQFDLTKGKNAT----DIALVIDAMDILYTKDVDIICLVSS 102 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQ-LRRQADYFMDLAYLKNEIARDPDED 180 D FT LV K ++ + F+ L + + P D Sbjct: 103 DCDFTPLVTRALADGK------FLIGFGERKAPSAFVNSCSRFLYLDEYEQSVEGLPKFD 156 Query: 181 K 181 K Sbjct: 157 K 157 >gi|302553970|ref|ZP_07306312.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM 40736] gi|302471588|gb|EFL34681.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM 40736] Length = 305 Score = 49.4 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 34/186 (18%), Positives = 64/186 (34%), Gaps = 31/186 (16%) Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53 A+F+D LYA++ L FD+D L+ A +A ++R Y+Y Sbjct: 42 AIFVDAGYLYAAAGRLVAGTEDRRAFDLDPEGLIDALIDKARTIFADSRLLRVYWY---D 98 Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112 G + + + L K N + +D + D + Sbjct: 99 GARRRIHTAEQQSIAELP---------DVKVRLGNLNANNQQKGVDSLIRTDLESLARHR 149 Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169 + + GD + V A Q +V + + ++ L + D +DL + Sbjct: 150 AISDAALLGGDEDLVSAVEAAQGYGARVHLWGIEAPEGRNQAEPLLWEVDSQRTLDLDFF 209 Query: 170 KNEIAR 175 K ++R Sbjct: 210 KPYVSR 215 >gi|91786924|ref|YP_547876.1| hypothetical protein Bpro_1025 [Polaromonas sp. JS666] gi|91696149|gb|ABE42978.1| protein of unknown function DUF88 [Polaromonas sp. JS666] Length = 260 Score = 49.4 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 33/171 (19%), Positives = 57/171 (33%), Gaps = 29/171 (16%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 D + ++AL ID N + ID +L + Y + S Sbjct: 2 DHKPRVALLIDADN------SPASKIDL--ILNELSTFGETNIRRAY------GNWKKSE 47 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 L + LH + + ++F + G+ D+ + +DA E ++ + I S Sbjct: 48 LKGWEEALHEH----AIRPMQQFDYSKGKNAS----DMAMVIDALELLYTDRPDAFGIVS 99 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 D FT LV L+ K V + F+ L L+ Sbjct: 100 SDADFTPLVMHLRAKGAAVYGFGAQKTPEPFV-----NACSKFLFLDKLRP 145 >gi|320008714|gb|ADW03564.1| hypothetical protein Sfla_2131 [Streptomyces flavogriseus ATCC 33331] Length = 303 Score = 49.4 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 32/185 (17%), Positives = 59/185 (31%), Gaps = 29/185 (15%) Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 A+F+D +YA++ L FD+D L++AF +A I A Sbjct: 40 AIFVDAGYVYAAAGLLVTGTEDRRSFDLDAEGLIEAFIDKARTIFA-----------DSR 88 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTE------NCGRKRVKSSMDVELAVDAFEQSEG-- 112 D V + E + N + +D + D + Sbjct: 89 LLRVYWYDGARRRIHTVEQQSIAELPDVKVRLGNLNANNQQKGVDSLIRTDLESLARHRA 148 Query: 113 LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYLK 170 + + GD + V A Q +V + + ++ L + D DL + + Sbjct: 149 ISDAALVGGDEDLVSAVEAAQGYGARVHLWGIEAGEGRNQAEPLLWEVDSQRTFDLDFCR 208 Query: 171 NEIAR 175 + R Sbjct: 209 PYVTR 213 >gi|271962863|ref|YP_003337059.1| hypothetical protein Sros_1318 [Streptosporangium roseum DSM 43021] gi|270506038|gb|ACZ84316.1| hypothetical protein Sros_1318 [Streptosporangium roseum DSM 43021] Length = 313 Score = 49.4 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 28/187 (14%), Positives = 66/187 (35%), Gaps = 30/187 (16%) Query: 7 KIALFIDGANLYASSKA--LG------FDIDYRKLLKAFRSR------AIVIRAYYYTTV 52 K A+ +D LYA++ LG + + +L++A + ++R Y+Y Sbjct: 14 KYAVLVDVGYLYAAAGEVLLGAKERKEYRVSADELIQALQKHAETRIHGELLRIYWYDAA 73 Query: 53 VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG 112 + L W K N + + +D ++ D + Sbjct: 74 RDRVPTVDQRVIAQLPW------------VKVRLGNLNARGQQKGVDAQIRSDLEALARH 121 Query: 113 --LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAY 168 + ++ +GD V A Q ++ + + +++L ++D + + Sbjct: 122 HAVSDTILLAGDEDMVPAVEAAQAYGVRIHLWGVEPPYGTNQAERLVWESDTVEIISADF 181 Query: 169 LKNEIAR 175 L++ +R Sbjct: 182 LRSYFSR 188 >gi|86741259|ref|YP_481659.1| hypothetical protein Francci3_2568 [Frankia sp. CcI3] gi|86568121|gb|ABD11930.1| hypothetical protein Francci3_2568 [Frankia sp. CcI3] Length = 199 Score = 49.4 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 17/109 (15%), Positives = 30/109 (27%), Gaps = 5/109 (4%) Query: 40 RAIVIRAYYYTTV---VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKS 96 + Y PE + W VV + + + Sbjct: 39 GGELAAVRVYRGRPSPDHQPEAARASDRQADRWTRDPRVVVVRRQLRYPKAWPAEPAQEK 98 Query: 97 SMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVS 143 +DV AVD + + V+FS D + ++ V + S Sbjct: 99 GIDVAFAVDFVRLACEGAYDVGVLFSRDTDLVPALEPVRDLGAHVEVAS 147 >gi|34557802|ref|NP_907617.1| hypothetical protein WS1458 [Wolinella succinogenes DSM 1740] gi|34483520|emb|CAE10517.1| conserved hypothetical protein [Wolinella succinogenes] Length = 248 Score = 49.4 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 31/172 (18%), Positives = 57/172 (33%), Gaps = 25/172 (14%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 +++A+ ID N A + LG +LL + Y Sbjct: 10 KRLAVLIDADN--AQASVLG------ELLAEISKYGTLNIKRAY---------GDWTSSN 52 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125 L W + + ++F G+ S++ ++ A+D + LE + S D F Sbjct: 53 LKSWKEHL-HKYAIAPIQQFNYTSGKNATDSALIID-AMDLLHDAP-LEGFCLVSSDSDF 109 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 T L ++ V + + + D F+ L+ E R P Sbjct: 110 TRLATRIRESGLVVYGFGEKKTPEAFVA-----ACDKFIYTEILRQEEQRRP 156 >gi|239813864|ref|YP_002942774.1| hypothetical protein Vapar_0855 [Variovorax paradoxus S110] gi|239800441|gb|ACS17508.1| protein of unknown function DUF88 [Variovorax paradoxus S110] Length = 272 Score = 49.4 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 34/137 (24%), Positives = 54/137 (39%), Gaps = 26/137 (18%) Query: 9 ALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLD 68 A+FID NL ++ +D+ L + I+ Y G PE L + Sbjct: 16 AVFIDADNLNDATA-----LDHVLLALRSMADRIL-----YRRAYGRPE----SLKSIHA 61 Query: 69 WLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFT 126 L +G + VA + + K++ D L +DA E ++ + I SGD F Sbjct: 62 VLWRHGVRPVANLIVD----------KTTTDSALVIDAVEAVCTNDIDIVAICSGDADFV 111 Query: 127 TLVAALQRKVKKVTIVS 143 L L+ K +V S Sbjct: 112 PLAIWLREKGCRVLCYS 128 >gi|146300165|ref|YP_001194756.1| hypothetical protein Fjoh_2410 [Flavobacterium johnsoniae UW101] gi|146154583|gb|ABQ05437.1| hypothetical protein Fjoh_2410 [Flavobacterium johnsoniae UW101] Length = 259 Score = 49.0 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 35/175 (20%), Positives = 57/175 (32%), Gaps = 37/175 (21%) Query: 7 KIALFIDGANL-YASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 K+A+ ID N+ Y++ K + ++ Y Sbjct: 10 KLAVLIDADNVPYSNVKGM---------MEEIAKFGTPTTKRIYA--------------- 45 Query: 66 LLDWLHYN--GFQ-VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 DW N G++ V+ + A + K+S D L +DA + S L+ I S Sbjct: 46 --DWTKPNANGWKAVLLEHAITPIQQYSYTVGKNSSDSALIIDAMDLLYSGKLDGFCIVS 103 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 D FT L L+ KV + D F+ + L I + Sbjct: 104 SDSDFTRLAVRLRESGMKVIGIGEKK-----TPSSFIVACDRFIYIEVLDGAIQK 153 >gi|170093988|ref|XP_001878215.1| predicted protein [Laccaria bicolor S238N-H82] gi|164646669|gb|EDR10914.1| predicted protein [Laccaria bicolor S238N-H82] Length = 565 Score = 49.0 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 12/59 (20%), Positives = 25/59 (42%), Gaps = 3/59 (5%) Query: 99 DVELAVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASD 154 D + VD + +V+ SGD F ++ L+ + V +++ + S+ S Sbjct: 91 DKMMLVDMLSHAIDNPAPTTIVLISGDRDFAYAISVLRLRRYHVVLITLANAHLSLTSQ 149 >gi|254524406|ref|ZP_05136461.1| protein containing DUF88 [Stenotrophomonas sp. SKA14] gi|219721997|gb|EED40522.1| protein containing DUF88 [Stenotrophomonas sp. SKA14] Length = 259 Score = 49.0 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 33/173 (19%), Positives = 54/173 (31%), Gaps = 29/173 (16%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M +P ++IAL ID N A ID ++L + Y Sbjct: 1 MSEPEKRIALLIDADN------APASKID--EVLAEVARYGVANVRRAY----------G 42 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118 + P L + + ++F + G+ D+ + +DA + + L+ I Sbjct: 43 NWKSPRLKGWEAVLHEYAIRPIQQFAYSKGKNAS----DMAMVIDAMDLLYARNLDGFAI 98 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 S D FT +V L KV + F L L Sbjct: 99 VSSDADFTPMVMRLLTDGVKVYGFGEKKTPEPFV-----NACSKFTYLEALGQ 146 >gi|25029366|ref|NP_739420.1| hypothetical protein CE2810 [Corynebacterium efficiens YS-314] gi|259508454|ref|ZP_05751354.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] gi|23494654|dbj|BAC19620.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] gi|259164008|gb|EEW48562.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] Length = 422 Score = 49.0 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 33/172 (19%), Positives = 58/172 (33%), Gaps = 29/172 (16%) Query: 6 EKIALFIDGANL---YA----SSKALGFDIDYRKLLKAFRS------RAIVIRAYYYTTV 52 E+ +F+D + L + + +ID +++ + V R +Y + Sbjct: 3 ERTQVFVDTSYLLASFYNSWETGARAQLEIDLPEVVGVLGRMIEQQLKQPVQRQMWYDGI 62 Query: 53 VGDPEQQFSPLHPLLDWLHY-NGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS- 110 S H L +G Q+ A E+ G +R + ++D L D Sbjct: 63 PD------SGPHRYQRALRTCDGVQLRAGQLIEW----GERRTQKAVDTRLVADLVLAGV 112 Query: 111 -EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161 +V+ SGD V +V + SM+S LR D Sbjct: 113 RGQCSDIVLVSGDADMIPGVQEATNAGVRVHLYGF--GWDSMSSQ-LRHCCD 161 >gi|194367375|ref|YP_002029985.1| hypothetical protein Smal_3603 [Stenotrophomonas maltophilia R551-3] gi|194350179|gb|ACF53302.1| protein of unknown function DUF88 [Stenotrophomonas maltophilia R551-3] Length = 259 Score = 49.0 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 33/173 (19%), Positives = 54/173 (31%), Gaps = 29/173 (16%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M +P ++IAL ID N A ID ++L + Y Sbjct: 1 MSEPEKRIALLIDADN------APASKID--EVLAEVARYGVANVRRAY----------G 42 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118 + P L + + ++F + G+ D+ + +DA + + L+ I Sbjct: 43 NWKSPRLKGWEAVLHEYAIRPIQQFAYSKGKNAS----DMAMVIDAMDLLYARNLDGFAI 98 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 S D FT +V L KV + F L L Sbjct: 99 VSSDADFTPMVMRLLTDGVKVYGFGEKKTPEPFV-----NACSKFTYLEALGQ 146 >gi|221369511|ref|YP_002520607.1| hypothetical protein RSKD131_3674 [Rhodobacter sphaeroides KD131] gi|221162563|gb|ACM03534.1| Hypothetical Protein RSKD131_3674 [Rhodobacter sphaeroides KD131] Length = 223 Score = 49.0 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 35/162 (21%), Positives = 58/162 (35%), Gaps = 37/162 (22%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 + A+ +DG N+ A+ G I L+ R Y P Sbjct: 4 RPAVLVDGDNISAA---HGRQI-----LEIARGHGTPGVVRVY-------GNAQCPK--- 45 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGC 124 DW G++++ K++ D+ LA+DA E + G+E V+ + DG Sbjct: 46 -DWHEAWGYRMI-----------HAGSGKNASDLLLAIDAMELALARGVEAFVVATSDGD 93 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 F+ L L+ V V + S R F++L Sbjct: 94 FSHLAHRLRELGTAVIGVGEAKAPASF-----RGACSRFVEL 130 >gi|237799136|ref|ZP_04587597.1| hypothetical protein POR16_09916 [Pseudomonas syringae pv. oryzae str. 1_6] gi|331021991|gb|EGI02048.1| hypothetical protein POR16_09916 [Pseudomonas syringae pv. oryzae str. 1_6] Length = 264 Score = 49.0 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 17/99 (17%), Positives = 38/99 (38%), Gaps = 7/99 (7%) Query: 76 QVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQ 133 +V+ + + + + K++ D L +DA + + + + S D FT L + L+ Sbjct: 59 KVLLDYSIQPIQQFAYTKGKNATDSSLIIDAMDLLYTRRFDGFCLVSSDSDFTRLASRLR 118 Query: 134 RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 + V + + D F+ + L+ E Sbjct: 119 EEGLTVYGFGEEKTPRPFVA-----ACDKFIYIELLREE 152 >gi|262204298|ref|YP_003275506.1| hypothetical protein Gbro_4480 [Gordonia bronchialis DSM 43247] gi|262087645|gb|ACY23613.1| hypothetical protein Gbro_4480 [Gordonia bronchialis DSM 43247] Length = 230 Score = 49.0 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 24/119 (20%), Positives = 48/119 (40%), Gaps = 21/119 (17%) Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG---LEHLVIFS 120 P +D L G+ V AK + ++ +D ++ +D + L +V+ S Sbjct: 101 RPWVDALRNVGYAVFAKP--KLADDS-------DVDADM-LDHIQLRRQTVGLAGVVVAS 150 Query: 121 GDGC-FTTLVAALQRKVKKVTIVSTVLSDP-SMASDQLRRQADYFMDLAYLKNEIARDP 177 DG F ++ + + VT++ ++ +D L F+DL + R+P Sbjct: 151 ADGQAFREPLSQVAAEGVGVTVIGFREHASWALTADDL-----EFIDLEDIPGVF-REP 203 >gi|254388917|ref|ZP_05004148.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC 27064] gi|197702635|gb|EDY48447.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC 27064] Length = 334 Score = 49.0 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 38/189 (20%), Positives = 66/189 (34%), Gaps = 37/189 (19%) Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53 A+F+D +YA++ L FD+D +++AF +A ++R Y+Y Sbjct: 70 AIFVDAGYVYAAAGLLVAGTEDRRAFDLDAEGMIEAFIDKARTIFADSRLLRVYWYDGAR 129 Query: 54 GD---PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110 PEQQ P K N + +D + D + Sbjct: 130 RRIHTPEQQSIAELP---------------DVKVRLGNLNANNQQKGVDSLIRSDLESLA 174 Query: 111 EG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDL 166 + + GD + V A Q +V + +D S ++ L + D DL Sbjct: 175 RHRAISDAALVGGDEDLVSAVEAAQGYGARVHLWGIEAADGSNQAEPLLWEVDSQRTFDL 234 Query: 167 AYLKNEIAR 175 + + I R Sbjct: 235 DFCRPYITR 243 >gi|284161858|ref|YP_003400481.1| hypothetical protein Arcpr_0744 [Archaeoglobus profundus DSM 5631] gi|284011855|gb|ADB57808.1| protein of unknown function DUF88 [Archaeoglobus profundus DSM 5631] Length = 171 Score = 49.0 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 26/161 (16%), Positives = 58/161 (36%), Gaps = 32/161 (19%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 + R++IA+ +DG N+ F+++ ++ + + A + Sbjct: 25 ESRKRIAVLVDGPNM----LRKEFNLNLSEIRDILKEYGDIKVAKVFL--------NQYA 72 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFS 120 L++ + GF+ V +DV +AV+A + + ++ L + + Sbjct: 73 TDKLVEAVENQGFEPVI--------------TSGDVDVRMAVEAMDLIYNDLIDVLALVT 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161 D F ++ K+ I+ S L+ AD Sbjct: 119 RDADFKAVLKKAMEMGKETIIIGAEPGF----STALKNSAD 155 >gi|294814854|ref|ZP_06773497.1| DUF88 domain-containing protein [Streptomyces clavuligerus ATCC 27064] gi|294327453|gb|EFG09096.1| DUF88 domain-containing protein [Streptomyces clavuligerus ATCC 27064] Length = 322 Score = 49.0 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 38/189 (20%), Positives = 66/189 (34%), Gaps = 37/189 (19%) Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53 A+F+D +YA++ L FD+D +++AF +A ++R Y+Y Sbjct: 58 AIFVDAGYVYAAAGLLVAGTEDRRAFDLDAEGMIEAFIDKARTIFADSRLLRVYWYDGAR 117 Query: 54 GD---PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110 PEQQ P K N + +D + D + Sbjct: 118 RRIHTPEQQSIAELP---------------DVKVRLGNLNANNQQKGVDSLIRSDLESLA 162 Query: 111 EG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDL 166 + + GD + V A Q +V + +D S ++ L + D DL Sbjct: 163 RHRAISDAALVGGDEDLVSAVEAAQGYGARVHLWGIEAADGSNQAEPLLWEVDSQRTFDL 222 Query: 167 AYLKNEIAR 175 + + I R Sbjct: 223 DFCRPYITR 231 >gi|317131070|ref|YP_004090384.1| protein of unknown function DUF88 [Ethanoligenens harbinense YUAN-3] gi|315469049|gb|ADU25653.1| protein of unknown function DUF88 [Ethanoligenens harbinense YUAN-3] Length = 255 Score = 49.0 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 54/170 (31%), Gaps = 35/170 (20%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 ++A+ ID N+ S + +L+ Y Sbjct: 8 RLAVLIDAENVPYS--------NVTGMLEEITRYGTPTVKRIYG---------------- 43 Query: 67 LDWLHYN--GFQ-VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSG 121 DW N G++ V+ A + K+S D + +DA + + ++ + S Sbjct: 44 -DWTTQNMSGWKNVLVPNAIVPVQQYCYTSGKNSSDSAMIIDAMDILYAGKIDGFCLVSS 102 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 D FT L L+ KKV D D F+ L + + Sbjct: 103 DSDFTRLATRLRESGKKVYGFGEKK-----TPDAFIAACDKFIYLEIIAS 147 >gi|78357527|ref|YP_388976.1| hypothetical protein Dde_2484 [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219932|gb|ABB39281.1| conserved hypothetical protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 439 Score = 49.0 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 35/167 (20%), Positives = 62/167 (37%), Gaps = 39/167 (23%) Query: 9 ALFIDGANLYASSK------ALGFDI--DYRKLLKAFRS-----------RAIVIRAYYY 49 ALF+D N+Y ++ G+ D ++ ++ R +++ Y Sbjct: 13 ALFVDFDNIY--TRLAEQDPQYGYLFATDPQRWMRWLEHHALRMLHGDGVRRRILKRCCY 70 Query: 50 TTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ 109 Q F P N F V K+ K+S D+ L +DA + Sbjct: 71 L-----NPQIFQDFRPHF---VRNAFSVTDCP-------PLTKQGKTSADIHLVIDALDA 115 Query: 110 SEG---LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMAS 153 + +I SGD FT L+ L+ +K ++S + P+ A+ Sbjct: 116 LSHPTYFDEFIILSGDADFTPLLIRLREHARKTLVLSVGFTSPAYAA 162 >gi|227505745|ref|ZP_03935794.1| conserved hypothetical protein [Corynebacterium striatum ATCC 6940] gi|227197713|gb|EEI77761.1| conserved hypothetical protein [Corynebacterium striatum ATCC 6940] Length = 198 Score = 49.0 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 22/116 (18%), Positives = 46/116 (39%), Gaps = 15/116 (12%) Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122 + P ++ + GF V AK + +D ++ E + L+ +++ S D Sbjct: 68 IRPWVEAIRNVGFAVFAKPKLHEDD---------DVDPDMIAYIQENRDNLDSVIVASAD 118 Query: 123 G-CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 G F +L+ L + K V ++ + + F+DL ++ R+P Sbjct: 119 GQNFQSLLEELAAEGKPVCVLGFHEHASWAVTHEDI----EFVDLEDIEGVF-REP 169 >gi|329118512|ref|ZP_08247216.1| hypothetical protein HMPREF9123_0644 [Neisseria bacilliformis ATCC BAA-1200] gi|327465247|gb|EGF11528.1| hypothetical protein HMPREF9123_0644 [Neisseria bacilliformis ATCC BAA-1200] Length = 264 Score = 49.0 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 33/171 (19%), Positives = 54/171 (31%), Gaps = 27/171 (15%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 ++A+ ID N AS++ D +L Y VGD Q ++ Sbjct: 17 RLAVLIDADN--ASAR------DIAAILDEVTKFGDATVKRTYGNFVGDNGQWKQVINDY 68 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126 K ++F G+ M ++ A+D S+ L+ I S D FT Sbjct: 69 -----------AIKPMQQFAFTTGKNATDGFMIID-AMDLL-YSDRLDGFCIVSSDSDFT 115 Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL-KNEIARD 176 L L+ + + F+ + L EI D Sbjct: 116 ALAIRLKEQGM--PVYGFGRKQ---TPKAFINACTQFIYVENLISEEIKND 161 >gi|320103348|ref|YP_004178939.1| hypothetical protein Isop_1808 [Isosphaera pallida ATCC 43644] gi|319750630|gb|ADV62390.1| protein of unknown function DUF88 [Isosphaera pallida ATCC 43644] Length = 276 Score = 48.6 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 15/119 (12%), Positives = 39/119 (32%), Gaps = 8/119 (6%) Query: 48 YYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAF 107 +Y +++ + + + + + + + +D +AVD Sbjct: 130 WYEGKKRALDRKKRFYYGVQAATDFVEIR---QEGHWKIDLLHHTINEKGLDTSMAVDMI 186 Query: 108 EQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDP-----SMASDQLRRQAD 161 + + ++ +GD V ++ K V ++ AS +L+ AD Sbjct: 187 ALRDTYDVALLITGDTDGIPGVHYVKNHAKHVGVIEFRRGSRDDFGGKTASSRLKIAAD 245 >gi|254173531|ref|ZP_04880203.1| conserved hypothetical protein TIGR00288 [Thermococcus sp. AM4] gi|214032223|gb|EEB73053.1| conserved hypothetical protein TIGR00288 [Thermococcus sp. AM4] Length = 165 Score = 48.6 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 62/164 (37%), Gaps = 32/164 (19%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 P+++I L IDG N+ F I +++A V A Q++P Sbjct: 18 QPKKRIGLIIDGPNI----LRKEFGIKLEDIIEALNRIGSVRIAKVIL-------NQYAP 66 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 L++ + G + V V DV +A++ E + ++ + + S Sbjct: 67 -QGLVEAIVNQGLEPVI--------------VAGDTDVRVAIETMEMIYTADVDVIALAS 111 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 D F L+ +R+ K+ ++ S L+ ADY + Sbjct: 112 RDADFLPLIIEAKRRGKETVVIGVEPGF----SVALQNAADYVI 151 >gi|330943352|gb|EGH45725.1| hypothetical protein PSYPI_26829 [Pseudomonas syringae pv. pisi str. 1704B] Length = 264 Score = 48.6 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 34/164 (20%), Positives = 56/164 (34%), Gaps = 29/164 (17%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 +A+FID N A SK LG +L S V Y Sbjct: 10 VAMFIDADN--APSKKLG------SVLAELASYGAVSIRRAYGNWKSPS----------- 50 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCF 125 L G +V+ + A + + + K++ D+ +AVDA + ++ + S D F Sbjct: 51 --LDPWG-KVLHEHAIQPVQQFDLVKGKNATDMAMAVDAMDVLFNKPVDVFCLVSSDCDF 107 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 T LV L+ + K+V + F+ Sbjct: 108 TPLVMRLRAEGKQVVGFGERKAPEPFV-----NACSRFLYFDQY 146 >gi|299753919|ref|XP_002911926.1| hypothetical protein CC1G_13966 [Coprinopsis cinerea okayama7#130] gi|298410524|gb|EFI28432.1| hypothetical protein CC1G_13966 [Coprinopsis cinerea okayama7#130] Length = 938 Score = 48.6 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 23/93 (24%), Positives = 39/93 (41%), Gaps = 19/93 (20%) Query: 99 DVELAVDAFEQSEGLEH-----LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMAS 153 D + VD + ++H ++ SGD F ++ L+ + KV +V+ A Sbjct: 538 DKMMLVDML--AHAIDHPAPRTFILISGDRDFAYALSTLRLRRYKVVLVTL-----PNAH 590 Query: 154 DQLRRQA----DYFMDLAYLKNEIARDPDEDKK 182 L+ QA D+F D+ + I P KK Sbjct: 591 ASLKAQATTCLDWFTDVVDI---ITPPPSSPKK 620 Score = 37.4 bits (86), Expect = 0.79, Method: Composition-based stats. Identities = 16/110 (14%), Positives = 40/110 (36%), Gaps = 13/110 (11%) Query: 48 YYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTE-NCGRKRVKSSMDVELAVDA 106 Y + + +P + L L +G T+ + + + ++V LA D Sbjct: 53 YLSISLHEPSSKRDRASALRSELQVSGVS--------LTDVDTSTPSLNAGLNVMLAADM 104 Query: 107 FEQS----EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMA 152 + + +V+ + V+ L+ + +V +V++ L + Sbjct: 105 YAYALDKTPLTATIVLVTNAPALAYAVSLLRLRNYRVVVVTSSLGGQDTS 154 >gi|315498578|ref|YP_004087382.1| hypothetical protein Astex_1565 [Asticcacaulis excentricus CB 48] gi|315416590|gb|ADU13231.1| hypothetical protein Astex_1565 [Asticcacaulis excentricus CB 48] Length = 254 Score = 48.6 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 32/183 (17%), Positives = 63/183 (34%), Gaps = 16/183 (8%) Query: 5 REKIALFIDGANLYASSKALGFD----IDYRKLLKAFR-SRAIVIRAYYYTTVVGDPEQQ 59 R++ A++ DG NLY + A +D + L +A S +V R + + + + Sbjct: 30 RKRAAVYYDGFNLYHAVDAYKRPYLKWLDLKALAQAISPSDEVVKRVVWCSAFRPQNKSK 89 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCG------RKRVKSSMDVELAVDAFEQSEG- 112 + L G + C ++ DV LA+ +E Sbjct: 90 MKRHEDYMRALQARGVLCRLGHFVSAIDGCNACGHQWHLAIEKQGDVNLALSIASDAEDN 149 Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 + + S DG L+ + K +V V + + R AD +++ + Sbjct: 150 LFDVCYLVSADGDHAATARYLKERFPKKELV-LVCPPGRYPNKHILRFADRVVEIE--RE 206 Query: 172 EIA 174 + Sbjct: 207 HLE 209 >gi|291453992|ref|ZP_06593382.1| conserved hypothetical protein [Streptomyces albus J1074] gi|291356941|gb|EFE83843.1| conserved hypothetical protein [Streptomyces albus J1074] Length = 317 Score = 48.6 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 34/191 (17%), Positives = 62/191 (32%), Gaps = 31/191 (16%) Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53 A+F+D LYA++ L FD+D L+ A RA ++R Y+Y Sbjct: 52 AVFVDAGYLYAAAGRLVTGTEERGAFDLDAEGLIDALIDRARQIFADSRLLRVYWY---- 107 Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112 + + K N + +D + D + Sbjct: 108 --DGARRRIHTAEQLAIAALP------DVKVRLGNLNANNQQKGVDSLIRGDLESLARHR 159 Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169 + V+ GD + V + Q +V + + +D L + D +DLA+ Sbjct: 160 AISDAVLIGGDEDLVSAVESAQGHGARVHLWGIEAPEGRNQADPLLWEVDTQRTLDLAFF 219 Query: 170 KNEIARDPDED 180 + + R Sbjct: 220 QPYLTRRATTP 230 >gi|257454371|ref|ZP_05619634.1| conserved hypothetical protein [Enhydrobacter aerosaccus SK60] gi|257448274|gb|EEV23254.1| conserved hypothetical protein [Enhydrobacter aerosaccus SK60] Length = 361 Score = 48.6 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 35/162 (21%), Positives = 59/162 (36%), Gaps = 28/162 (17%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 IA+ IDG N+ ++K + +L + + Y GD +Q L Sbjct: 11 IAVLIDGDNI--NAK------NIESILAKVSTLGTIACKRIY----GDFKQG-----KLT 53 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE-GLEHLVIFSGDGCFT 126 W + K+ E + K++ D+ LA+DA + S + I S D F+ Sbjct: 54 TWDD-----ISLKLLLEQVHIPAYVKGKNATDIALAIDAVDLSYLDYDCFCIISSDSDFS 108 Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 L L+ K KKV S + + D + + Sbjct: 109 ILAKNLRTKGKKV-----FGFGKSTTVESFKVACDDYFVMDD 145 >gi|117922000|ref|YP_871192.1| hypothetical protein Shewana3_3564 [Shewanella sp. ANA-3] gi|117614332|gb|ABK49786.1| protein of unknown function DUF88 [Shewanella sp. ANA-3] Length = 268 Score = 48.6 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 29/167 (17%), Positives = 52/167 (31%), Gaps = 29/167 (17%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 +EKIA+FID N A D +L ++ Y P Sbjct: 2 QNKEKIAVFIDADN------APARKFD--VVLAELAKHGLISIRKAY---GNWKSPNLKP 50 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 +L + + ++F G+ D+ L +D + ++ ++ + + S Sbjct: 51 WEEIL-------HEYAIQPIQQFDLTKGKNAS----DIALVIDVMDILYTKDIDIICLIS 99 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 D FT LV K V + + F+ L Sbjct: 100 SDCDFTPLVTRALADGKTV----FGFGERKAPA-AFVNSCSRFLYLD 141 >gi|238023177|ref|ZP_04603603.1| hypothetical protein GCWU000324_03103 [Kingella oralis ATCC 51147] gi|237865560|gb|EEP66700.1| hypothetical protein GCWU000324_03103 [Kingella oralis ATCC 51147] Length = 258 Score = 48.2 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 31/163 (19%), Positives = 59/163 (36%), Gaps = 29/163 (17%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 +A+FID N+ A ID+ ++ + V+ Y + + + + LL Sbjct: 10 VAVFIDADNVPA------KKIDF--IISELANYGAVMVRKIYGNWKSERLKGWEEV--LL 59 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCF 125 D+ ++F G+ D+ L +D + S ++ I S D F Sbjct: 60 DY--------ALAPVQQFDYAKGKNAT----DMALTIDVMDMLYSGKIDVFCIVSSDSDF 107 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 T L ++ + K+V + S L + F+ L Sbjct: 108 TPLAMRVKTEGKQV-----IGFGRHSTSKALVAACNKFLFLDD 145 >gi|121999162|ref|YP_001003949.1| hypothetical protein Hhal_2384 [Halorhodospira halophila SL1] gi|121590567|gb|ABM63147.1| conserved hypothetical protein [Halorhodospira halophila SL1] Length = 218 Score = 48.2 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 30/158 (18%), Positives = 52/158 (32%), Gaps = 31/158 (19%) Query: 7 KIALFIDGANLYASSK---ALGFDIDYRKLLK--AFRSRAIVIRAYYYTT----VVGDPE 57 + +++DG NLY A + +D L + A + ++ YYT + D Sbjct: 2 RTVVYVDGYNLYYGLLRKTAFKW-LDLVVLFRDHALDPQVDLVEVRYYTAPVLGRMCDDP 60 Query: 58 QQFSPLHPLLDWLHYN----------------GFQVVAKVAKEFTENCGRK---RVKSSM 98 + L L F+ +A+ E + + + Sbjct: 61 KSPQRQRRYLQALRTMHPERLSIIEGKIIATTPFKRLAQPIPERPDLERVQVLDFHEKKT 120 Query: 99 DVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQR 134 DV LA D S E V+ S D +A ++R Sbjct: 121 DVNLAADLIAGSWVGSYEQAVVCSNDTDLDAALATVRR 158 >gi|257455528|ref|ZP_05620760.1| conserved hypothetical protein [Enhydrobacter aerosaccus SK60] gi|257447097|gb|EEV22108.1| conserved hypothetical protein [Enhydrobacter aerosaccus SK60] Length = 350 Score = 48.2 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 59/167 (35%), Gaps = 28/167 (16%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 K+A+ ID N +S+K + +L+ + Y + L Sbjct: 12 KLAVLIDADN--SSAKKI------PLILQEVAKYGVASVKRVY------GDWSSENLKNW 57 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGC 124 D L + ++F G+ D+ L ++A + S+ L+ I S D Sbjct: 58 RDVLLPHAIT----PVQQFAYTSGKDAT----DMMLIINAMDLLYSKALDGFCIVSSDSD 109 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 FT L + ++ +V + S + D F+ + L++ Sbjct: 110 FTPLASRIRESG----LVVYGFGEKSKTPEAFINACDKFIYIENLED 152 >gi|294670344|ref|ZP_06735227.1| hypothetical protein NEIELOOT_02063 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291307948|gb|EFE49191.1| hypothetical protein NEIELOOT_02063 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 399 Score = 48.2 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 37/177 (20%), Positives = 60/177 (33%), Gaps = 30/177 (16%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 +K+A+ ID N + A DI +LL+ I Y GD S Sbjct: 6 NKKLAVLIDADN----APA---DI-IDRLLEEIAKYGIASVKRIY----GDWSHGLSKWK 53 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGD 122 L ++ ++F G+ D+ L +DA + S + I S D Sbjct: 54 AAL-----LPHAII--PVQQFAYTKGKNAT----DMALVIDAMDLLYSGNFDGFCIVSSD 102 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 FT L + L+ +T+ + R+ D F+ + E R E Sbjct: 103 SDFTRLASRLRESG--LTVYGFGEKK---TPEAFRKACDKFVYTEIFRPEKQRQEKE 154 >gi|114570762|ref|YP_757442.1| hypothetical protein Mmar10_2212 [Maricaulis maris MCS10] gi|114341224|gb|ABI66504.1| conserved hypothetical protein [Maricaulis maris MCS10] Length = 201 Score = 48.2 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 33/186 (17%), Positives = 66/186 (35%), Gaps = 34/186 (18%) Query: 7 KIALFIDGANLYASSKALG--FDIDYRKLLKA--FRSRAIVIRAYYY---------TTVV 53 K+A+ IDG ++ G ++ D+ + L R ++RA YY V Sbjct: 2 KVAVLIDGGFTRVLARKDGHSYNPDFIENLAHCVVSDRETLLRALYYDCEPFTGTVQLPV 61 Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEF----------------TENCGRKRVKSS 97 +++FS LD L F V K +F ++ + Sbjct: 62 SGEDKEFSKSGKWLDDLARKDFFAVRKGVLKFRGFKPRKIPVSGRALSDQDFAPDFEQKG 121 Query: 98 MDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQ 155 +D+ + +D S +E +V+ S D + ++ ++ + P + + Sbjct: 122 VDMRIGLDMATLSNGPKVERIVLISNDTDCVPAMKHARKAGVQLVLGVPPNQSP---AHE 178 Query: 156 LRRQAD 161 L +D Sbjct: 179 LAMHSD 184 >gi|89896708|ref|YP_520195.1| hypothetical protein DSY3962 [Desulfitobacterium hafniense Y51] gi|89336156|dbj|BAE85751.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 274 Score = 48.2 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 23/146 (15%), Positives = 53/146 (36%), Gaps = 13/146 (8%) Query: 11 FIDGANLYASSKALGFDIDYRKLLKAFR---SRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 FID N++ G+++ L+++ + + + + Y D E+ + Sbjct: 6 FIDYENIWTGLFEQGYELTPEILMESIQLYAKQNDYVLSAIYLYANFDREEFWRAQTSFE 65 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDA----FEQSEGLEHLVIFSGDG 123 V + +++ DVEL ++A ++ + + +GDG Sbjct: 66 K------IHVYTRHVYGKNNFASTGLRRNAADVELILEAQEILLTRTATFDVFFLLTGDG 119 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDP 149 F L+ ++ K V ++ S Sbjct: 120 DFLPLLRKVRAWGKDVKVIGVKGSMH 145 >gi|94496412|ref|ZP_01302989.1| hypothetical protein SKA58_09476 [Sphingomonas sp. SKA58] gi|94424158|gb|EAT09182.1| hypothetical protein SKA58_09476 [Sphingomonas sp. SKA58] Length = 257 Score = 48.2 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 35/75 (46%), Gaps = 7/75 (9%) Query: 99 DVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156 D+++ +DA + S ++ + S D FT LV +++ + + ++ + Sbjct: 80 DMKMTIDAMDLLASGRVDGFGLMSSDSDFTPLVTRIRQDG--IPVYGFGNAN---TPEGF 134 Query: 157 RRQADYFMDLAYLKN 171 RR F+D+A L+ Sbjct: 135 RRACTRFIDVAALEP 149 >gi|72163404|ref|YP_291061.1| hypothetical protein Tfu_3005 [Thermobifida fusca YX] gi|71917136|gb|AAZ57038.1| hypothetical protein Tfu_3005 [Thermobifida fusca YX] Length = 516 Score = 48.2 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 30/190 (15%), Positives = 63/190 (33%), Gaps = 37/190 (19%) Query: 5 REKIALFIDGANL-------YASSK---ALGFDIDYRKLLKAF------RSRAIVIRAYY 48 ++ ALF+D L ++ ++ + DY L++ R+ +R Y+ Sbjct: 1 MDRCALFVDAGYLLAEGAMAVHGTRDRDSVSW--DYAALVQLLNEVARDRTGLPPLRCYW 58 Query: 49 YTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE 108 Y V Q + + + + + E K D Sbjct: 59 YEAVTDSRRSQEQEGIAEIPGVKFR--AARIRPGRR--EGVENYVQK---------DLIP 105 Query: 109 QSEG---LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165 + + V+ GD ++A Q +VT+V + S LR + D ++ Sbjct: 106 LARNRAICD-AVLVCGDEDMAPVIAEAQEYGVRVTVVHISIEGNWTVSRALRHECDDLIE 164 Query: 166 L--AYLKNEI 173 + +L+ + Sbjct: 165 IGAGHLRPHV 174 >gi|212705003|ref|ZP_03313131.1| hypothetical protein DESPIG_03071 [Desulfovibrio piger ATCC 29098] gi|212671555|gb|EEB32038.1| hypothetical protein DESPIG_03071 [Desulfovibrio piger ATCC 29098] Length = 229 Score = 48.2 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 35/166 (21%), Positives = 58/166 (34%), Gaps = 37/166 (22%) Query: 9 ALFIDGANLYA--------SSKALGFDIDYR----------KLLKAFRSRAIVIRAYYYT 50 AL++D N+Y +++A G YR ++L R +++ Y Sbjct: 13 ALYVDFDNIYTRFLEADPEAARAFGMA-PYRWVRWIENHALRILYGDGVRRRILKRMCYL 71 Query: 51 TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAF--- 107 + FQVV R K+S D+ L +D Sbjct: 72 --------NPQRYQEFRYHFIRSAFQVVDCP-------PLTTRGKTSTDIHLVMDCMDDL 116 Query: 108 EQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMAS 153 + +I SGD FT L+ LQ ++ I+S S P+ + Sbjct: 117 SHPTHFDEFIILSGDADFTPLLIRLQEHARRTLILSVGYSSPAYTA 162 >gi|255931419|ref|XP_002557266.1| Pc12g03870 [Penicillium chrysogenum Wisconsin 54-1255] gi|211581885|emb|CAP80014.1| Pc12g03870 [Penicillium chrysogenum Wisconsin 54-1255] Length = 259 Score = 48.2 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 19/107 (17%), Positives = 38/107 (35%), Gaps = 7/107 (6%) Query: 77 VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQR 134 V+ + + + + K++ D + VDA + S + + S D FT L ++ Sbjct: 56 VLLRNSIQPIQQFAYTHGKNATDSAMIVDAMDLLHSGNFDGFCLVSSDSDFTRLATRIRE 115 Query: 135 KVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 KV + + D F+ LK P+ ++ Sbjct: 116 SGLKVYGFGERKTPKPFVA-----ACDEFIYTEDLKYLPEFAPNSNE 157 >gi|188583320|ref|YP_001926765.1| hypothetical protein Mpop_4114 [Methylobacterium populi BJ001] gi|179346818|gb|ACB82230.1| hypothetical protein Mpop_4114 [Methylobacterium populi BJ001] Length = 246 Score = 48.2 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 53/135 (39%), Gaps = 14/135 (10%) Query: 4 PREKIALFIDGANLYASSKALGFDI----DYRKLLKAFRSR--AIVIRAYYYTTVVGDPE 57 R + AL+IDG NLY S LG ++ KL ++ SR ++R + T Sbjct: 10 SRIRAALYIDGFNLYHSVNDLGEPFLKWCNFWKLGESIISRQSEELVRVVFCTAYYPGDH 69 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFT---ENCGRKRVKSS---MDVELAVDAFEQS- 110 + L+ L G + V +CG K + D+ LA+ ++ + Sbjct: 70 SKKIRHERLVRALKLVGVETVLGHFSHEDAKCRDCGSTWQKPTEKATDINLALSVYDDAV 129 Query: 111 -EGLEHLVIFSGDGC 124 + ++ + + D Sbjct: 130 QDVMDTAYLLTADTD 144 >gi|222479667|ref|YP_002565904.1| protein of unknown function DUF88 [Halorubrum lacusprofundi ATCC 49239] gi|222452569|gb|ACM56834.1| protein of unknown function DUF88 [Halorubrum lacusprofundi ATCC 49239] Length = 164 Score = 48.2 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 35/166 (21%), Positives = 56/166 (33%), Gaps = 31/166 (18%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 +ALF+DG N+ FD+D + A + ++ Y L+ Sbjct: 13 VALFVDGPNV----LREEFDVDLDDVRIAAEAEGQLVTTRLYL--------DEHATPGLI 60 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCF 125 GF+VV +DV+LAVDA + + L I S D F Sbjct: 61 QAAEARGFEVVV--------------TSGDVDVKLAVDAARFAAEGRMSTLAIASRDTDF 106 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 +V + ++ SD LR + + L +N Sbjct: 107 KPVVEIANSYGIRTLAIAPGEFGR---SDALRNATNDSVTLDGDRN 149 >gi|254776999|ref|ZP_05218515.1| hypothetical protein MaviaA2_20351 [Mycobacterium avium subsp. avium ATCC 25291] Length = 296 Score = 48.2 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 43/189 (22%), Positives = 69/189 (36%), Gaps = 23/189 (12%) Query: 7 KIALFIDGANLYASSK-----ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 ++A+++D N+ S F D K L+ F R + +A + D F Sbjct: 12 RVAVYLDFDNIVISRYDQIHGRNSFQRDKAKGLEQFTER--LEQATVDVGAILDFASSFG 69 Query: 62 PL---HPLLDWLHYN--GFQ--VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---E 111 L DW G++ +VA+ K+ D+ LAVDA E Sbjct: 70 TLVLTRAYADWSAEINAGYRGQLVARAVDLVQLFPAAAYGKNGADIRLAVDAVEDMFRLP 129 Query: 112 GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 L H+VI +GD + L +R + V + + +S L D F+ L Sbjct: 130 DLTHVVIVAGDSDYIPLAQRCKRLGRYVVGIGVAGA----SSRALAAACDEFVIYDALPG 185 Query: 172 E--IARDPD 178 + R P Sbjct: 186 VTALDRTPA 194 >gi|239982145|ref|ZP_04704669.1| hypothetical protein SalbJ_22130 [Streptomyces albus J1074] Length = 302 Score = 48.2 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 34/191 (17%), Positives = 62/191 (32%), Gaps = 31/191 (16%) Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53 A+F+D LYA++ L FD+D L+ A RA ++R Y+Y Sbjct: 37 AVFVDAGYLYAAAGRLVTGTEERGAFDLDAEGLIDALIDRARQIFADSRLLRVYWY---- 92 Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112 + + K N + +D + D + Sbjct: 93 --DGARRRIHTAEQLAIAALP------DVKVRLGNLNANNQQKGVDSLIRGDLESLARHR 144 Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169 + V+ GD + V + Q +V + + +D L + D +DLA+ Sbjct: 145 AISDAVLIGGDEDLVSAVESAQGHGARVHLWGIEAPEGRNQADPLLWEVDTQRTLDLAFF 204 Query: 170 KNEIARDPDED 180 + + R Sbjct: 205 QPYLTRRATTP 215 >gi|296272728|ref|YP_003655359.1| hypothetical protein Arnit_1193 [Arcobacter nitrofigilis DSM 7299] gi|296096902|gb|ADG92852.1| protein of unknown function DUF88 [Arcobacter nitrofigilis DSM 7299] Length = 236 Score = 48.2 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 37/180 (20%), Positives = 62/180 (34%), Gaps = 26/180 (14%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 +K+A+ ID N AS +LL+ I Y + S Sbjct: 4 MSTDKLAVLIDADNAQASV--------ISELLEEIAKFGITNIKRAY------GDWTTSQ 49 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122 L + LH + Q ++F+ G+ SS+ ++ A+D L+ I S D Sbjct: 50 LKGWKEHLHTHAIQ----PIQQFSYTNGKNATDSSLIID-AMDIL-HENRLDGFCIISSD 103 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182 FT L ++ KV + + S D F+ L+ I P + + Sbjct: 104 SDFTRLATRIRESGLKVYGFGEQKTPEAFIS-----ACDKFVYTENLRE-IKEVPQTNNE 157 >gi|302692534|ref|XP_003035946.1| hypothetical protein SCHCODRAFT_232516 [Schizophyllum commune H4-8] gi|300109642|gb|EFJ01044.1| hypothetical protein SCHCODRAFT_232516 [Schizophyllum commune H4-8] Length = 1064 Score = 48.2 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 12/72 (16%) Query: 99 DVELAVDAFEQSEGLE-----HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMAS 153 D L VD + + +V+ SGD F A L+ + ++ I+S P+ A Sbjct: 85 DQMLQVDMLVFA--WDNPPPTTIVLISGDRDFAYAAAILRNRNFRIVIIS-----PAQAV 137 Query: 154 DQLRRQADYFMD 165 LR QA + D Sbjct: 138 TCLREQATHVYD 149 >gi|326443231|ref|ZP_08217965.1| hypothetical protein SclaA2_19298 [Streptomyces clavuligerus ATCC 27064] Length = 303 Score = 48.2 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 38/189 (20%), Positives = 66/189 (34%), Gaps = 37/189 (19%) Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53 A+F+D +YA++ L FD+D +++AF +A ++R Y+Y Sbjct: 39 AIFVDAGYVYAAAGLLVAGTEDRRAFDLDAEGMIEAFIDKARTIFADSRLLRVYWYDGAR 98 Query: 54 GD---PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110 PEQQ P K N + +D + D + Sbjct: 99 RRIHTPEQQSIAELP---------------DVKVRLGNLNANNQQKGVDSLIRSDLESLA 143 Query: 111 EG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDL 166 + + GD + V A Q +V + +D S ++ L + D DL Sbjct: 144 RHRAISDAALVGGDEDLVSAVEAAQGYGARVHLWGIEAADGSNQAEPLLWEVDSQRTFDL 203 Query: 167 AYLKNEIAR 175 + + I R Sbjct: 204 DFCRPYITR 212 >gi|262198573|ref|YP_003269782.1| hypothetical protein Hoch_5405 [Haliangium ochraceum DSM 14365] gi|262081920|gb|ACY17889.1| protein of unknown function DUF88 [Haliangium ochraceum DSM 14365] Length = 450 Score = 47.8 bits (113), Expect = 6e-04, Method: Composition-based stats. Identities = 35/186 (18%), Positives = 58/186 (31%), Gaps = 23/186 (12%) Query: 6 EKIALFIDGANLYAS--------SK---ALGFDIDYRKL---LKAFRSRAIVIRAYYYTT 51 + AL ID N Y S ++ F D L + +I Y Sbjct: 15 QHAALLIDLENFYLSRENGTLSEARGEVHYDFHRDLEILCRGAQRIAGDKRLIVRRAYAD 74 Query: 52 VVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTE--NCGRKRVKSSMDVELAVDAFEQ 109 S D+ + +++ + E + K++ D+ LA+DA Sbjct: 75 FNAYRRSDDSARPYRKDYYLRHTPKLLMERGVEPVQVFRFPGGGNKNAADMRLAMDATTL 134 Query: 110 S---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 ++ ++ +GD F L L+R V + S L R D F Sbjct: 135 MAPPSCVDTFILVTGDADFIRLTLELRRCGAFVA----GIGVRETTSSVLPRYCDRFDYF 190 Query: 167 AYLKNE 172 L E Sbjct: 191 TDLAGE 196 >gi|221065080|ref|ZP_03541185.1| protein of unknown function DUF88 [Comamonas testosteroni KF-1] gi|220710103|gb|EED65471.1| protein of unknown function DUF88 [Comamonas testosteroni KF-1] Length = 300 Score = 47.8 bits (113), Expect = 6e-04, Method: Composition-based stats. Identities = 35/169 (20%), Positives = 56/169 (33%), Gaps = 29/169 (17%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 + +IAL ID N A ID ++L + ++ Y + LH Sbjct: 6 QPRIALLIDADN------APAEMID--EILTELSTFGLINIRRAY------GNWTKAGLH 51 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGD 122 L + V + ++F + G+ D+ + VDA E +E + I S D Sbjct: 52 GWQSKL--LEYAV--RPMQQFDYSKGKNAT----DMAMTVDAMELLYTEKPDAFGIVSSD 103 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 FT LV L+ K + F+ LK Sbjct: 104 ADFTPLVMHLRAKGA--AVYGFGAEQ---TPKAFVNACSRFLYFDALKE 147 >gi|47104079|ref|YP_015508.1| hypothetical protein PBPRC0054 [Photobacterium profundum SS9] gi|46911643|emb|CAG17992.1| conserved protein of unknown functions [Photobacterium profundum SS9] Length = 341 Score = 47.8 bits (113), Expect = 6e-04, Method: Composition-based stats. Identities = 29/168 (17%), Positives = 56/168 (33%), Gaps = 31/168 (18%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M + K+ALFID N ASS L F +L ++ + Sbjct: 1 MNTAQSKVALFIDADN--ASSSNLEF------VLSELKNHGDTC------IRKAFGNWKR 46 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG----LEHL 116 L L NG + V + + K++ D+ + + + ++ + Sbjct: 47 PNLQSWEKILCKNGIESVQQ--------FDLTKNKNATDIAITISVMDFIHRKDLNVDTI 98 Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 + + D FT LV +++ V + L+ +F+ Sbjct: 99 CLMTSDCDFTPLVTRVRQSGFNVICAGENKTPAP-----LKESCTHFI 141 >gi|296168350|ref|ZP_06850274.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896781|gb|EFG76414.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 297 Score = 47.8 bits (113), Expect = 6e-04, Method: Composition-based stats. Identities = 33/162 (20%), Positives = 55/162 (33%), Gaps = 20/162 (12%) Query: 19 ASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVV 78 +++ +D +L S I++ Y D + Q+V Sbjct: 43 YANRLDRSTVDVGAILDFASSFGILVLTRAYADWSADINAGYRG-------------QLV 89 Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRK 135 A+ K+ D+ LAVDA E L H+VI +GD + L +R Sbjct: 90 ARAVDLVQLFPAAAYGKNGADIRLAVDAVEDMFRLPDLTHVVIVAGDSDYIPLAQRCKRL 149 Query: 136 VKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 + V + + +S L D F+ L A +P Sbjct: 150 GRYVVGIGVAGA----SSRALAAACDEFVVYDSLPGVPALEP 187 >gi|299753946|ref|XP_001833647.2| EDA32 [Coprinopsis cinerea okayama7#130] gi|298410535|gb|EAU88192.2| EDA32 [Coprinopsis cinerea okayama7#130] Length = 491 Score = 47.8 bits (113), Expect = 6e-04, Method: Composition-based stats. Identities = 12/59 (20%), Positives = 26/59 (44%), Gaps = 3/59 (5%) Query: 99 DVELAVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASD 154 D + VD + +V+ SGD + ++ L+ + V +++ + PS+ S Sbjct: 83 DKMIIVDMLLYAMDNPAPATVVLISGDKDYAYAISVLRLRQYDVVVLTPPNASPSLTSH 141 >gi|166033313|ref|ZP_02236142.1| hypothetical protein DORFOR_03039 [Dorea formicigenerans ATCC 27755] gi|166027670|gb|EDR46427.1| hypothetical protein DORFOR_03039 [Dorea formicigenerans ATCC 27755] Length = 308 Score = 47.8 bits (113), Expect = 6e-04, Method: Composition-based stats. Identities = 37/167 (22%), Positives = 60/167 (35%), Gaps = 31/167 (18%) Query: 9 ALFIDGANLYASSKALGFDIDYRK-LLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 AL ID N+ S+K Y K +L + Y + + Sbjct: 7 ALLIDADNV--SAK-------YIKPILTELSKYGNITYKRIY------GDWTNTQHSSWK 51 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCF 125 D L N ++F+ G K+S D + +DA + ++ ++ I S D F Sbjct: 52 DELLKNSIT----PIQQFSYTQG----KNSTDSAMIIDAMDILYAKDVDGFCIVSSDSDF 103 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 T LV+ L+ K V + + R+ D F L L +E Sbjct: 104 TRLVSRLRESGKMVIGMGENKTPEPF-----RKACDKFTILENLLSE 145 >gi|41410167|ref|NP_963003.1| hypothetical protein MAP4069c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41399000|gb|AAS06619.1| hypothetical protein MAP_4069c [Mycobacterium avium subsp. paratuberculosis K-10] Length = 292 Score = 47.8 bits (113), Expect = 6e-04, Method: Composition-based stats. Identities = 43/189 (22%), Positives = 69/189 (36%), Gaps = 23/189 (12%) Query: 7 KIALFIDGANLYASSK-----ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 ++A+++D N+ S F D K L+ F R + +A + D F Sbjct: 8 RVAVYLDFDNIVISRYDQIHGRNSFQRDKAKGLEQFTER--LEQATVDVGAILDFASSFG 65 Query: 62 PL---HPLLDWLHYN--GFQ--VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---E 111 L DW G++ +VA+ K+ D+ LAVDA E Sbjct: 66 TLVLTRAYADWSAEINAGYRGQLVARAVDLVQLFPAAAYGKNGADIRLAVDAVEDMFRLP 125 Query: 112 GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 L H+VI +GD + L +R + V + + +S L D F+ L Sbjct: 126 DLTHVVIVAGDSDYIPLAQRCKRLGRYVVGIGVAGA----SSRALAAACDEFVIYDALPG 181 Query: 172 E--IARDPD 178 + R P Sbjct: 182 VTALDRTPA 190 >gi|312879353|ref|ZP_07739153.1| protein of unknown function DUF88 [Aminomonas paucivorans DSM 12260] gi|310782644|gb|EFQ23042.1| protein of unknown function DUF88 [Aminomonas paucivorans DSM 12260] Length = 289 Score = 47.8 bits (113), Expect = 6e-04, Method: Composition-based stats. Identities = 16/79 (20%), Positives = 30/79 (37%), Gaps = 7/79 (8%) Query: 99 DVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156 D + +DA + + + + S D FT L + ++ + K+V + + S Sbjct: 122 DSAMIIDAMDLLYTGRFDGFCLVSSDSDFTRLASRIREEGKRVVGFGEKKTPRAFVS--- 178 Query: 157 RRQADYFMDLAYLKNEIAR 175 D F+ L E R Sbjct: 179 --ACDKFIYTELLVAETGR 195 >gi|114764063|ref|ZP_01443302.1| hypothetical protein 1100011001333_R2601_15432 [Pelagibaca bermudensis HTCC2601] gi|114543421|gb|EAU46436.1| hypothetical protein R2601_15432 [Roseovarius sp. HTCC2601] Length = 236 Score = 47.8 bits (113), Expect = 6e-04, Method: Composition-based stats. Identities = 18/84 (21%), Positives = 32/84 (38%), Gaps = 7/84 (8%) Query: 88 NCGRKRVKSSMDVELAVDAFEQSE--GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTV 145 + K+S D+ L +DA + + V+ S D FT L + ++ + V + Sbjct: 66 SPANTVGKNSSDISLVIDAMDLMHTGRFDGFVVVSSDSDFTRLASRIREQGLDVYGMGMQ 125 Query: 146 LSDPSMASDQLRRQADYFMDLAYL 169 D R+ F+ L L Sbjct: 126 K-----TPDAFRKACKRFIFLENL 144 >gi|284988699|ref|YP_003407253.1| hypothetical protein Gobs_0072 [Geodermatophilus obscurus DSM 43160] gi|284061944|gb|ADB72882.1| hypothetical protein Gobs_0072 [Geodermatophilus obscurus DSM 43160] Length = 268 Score = 47.8 bits (113), Expect = 6e-04, Method: Composition-based stats. Identities = 26/111 (23%), Positives = 45/111 (40%), Gaps = 12/111 (10%) Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 L ++ L GF V A+ ++ ++ + + +D +D S L LV+FSG Sbjct: 130 SLQRWVEALRGFGFAVFARPKQQPDDDIDQ----AMLD---HIDVRRHSHRLRRLVVFSG 182 Query: 122 DG-CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 DG F + L R +VT+V+ L F+D+ + Sbjct: 183 DGRNFAEPLEELARTGTQVTVVAFSEVAGYAIGSDLL----EFIDIEDVPG 229 >gi|332139693|ref|YP_004425431.1| hypothetical protein MADE_1001420 [Alteromonas macleodii str. 'Deep ecotype'] gi|327549715|gb|AEA96433.1| hypothetical protein MADE_1001420 [Alteromonas macleodii str. 'Deep ecotype'] Length = 249 Score = 47.8 bits (113), Expect = 6e-04, Method: Composition-based stats. Identities = 32/159 (20%), Positives = 54/159 (33%), Gaps = 25/159 (15%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 +K+A+ ID N S + +L + V+ Y D Sbjct: 8 KKVAVLIDADNAQLSKLS--------AILDEISAHGHVLIKRAYGDWSID---ALKNWKT 56 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125 L+ L + ++F G+ +SM ++ A+D SE ++ + S D F Sbjct: 57 PLNELA-------IQPIQQFAYTTGKNATDASMIID-AMDLL-YSEKIDAFALVSSDSDF 107 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 T L + L+ K V V R D F+ Sbjct: 108 TKLASRLRESEKFVFGVGEKK-----TPVSFRNACDDFI 141 >gi|322696485|gb|EFY88277.1| hypothetical protein MAC_05750 [Metarhizium acridum CQMa 102] Length = 251 Score = 47.8 bits (113), Expect = 7e-04, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 33/86 (38%), Gaps = 7/86 (8%) Query: 95 KSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMA 152 K+S D + +DA + S + + S D FT L + ++ V + ++ Sbjct: 74 KNSTDAAMVIDAMDLLYSNRFDGFCLVSSDSDFTRLASRIRESGLLVYGFGERKAPKALV 133 Query: 153 SDQLRRQADYFMDLAYLKNEIARDPD 178 S D F+ + L + PD Sbjct: 134 S-----ACDKFIYIENLSQNVDFAPD 154 >gi|237800598|ref|ZP_04589059.1| hypothetical protein POR16_17368 [Pseudomonas syringae pv. oryzae str. 1_6] gi|331023458|gb|EGI03515.1| hypothetical protein POR16_17368 [Pseudomonas syringae pv. oryzae str. 1_6] Length = 274 Score = 47.8 bits (113), Expect = 7e-04, Method: Composition-based stats. Identities = 13/64 (20%), Positives = 21/64 (32%), Gaps = 5/64 (7%) Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170 + + + D F L L+ + V IV D LR +D F + + Sbjct: 94 HRADMFCLVTSDSDFAYLCRKLRERGASVCIVG-----EPKTPDALRNASDQFFEWRRNE 148 Query: 171 NEIA 174 I Sbjct: 149 EPIK 152 >gi|187940199|gb|ACD39327.1| hypothetical protein PACL_0668 [Pseudomonas aeruginosa] Length = 274 Score = 47.8 bits (113), Expect = 7e-04, Method: Composition-based stats. Identities = 12/55 (21%), Positives = 19/55 (34%), Gaps = 5/55 (9%) Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165 + + + D F L L+ + V IV D LR +D F + Sbjct: 94 SRADTFCLVTSDSDFAYLCRKLRERGAMVCIVG-----EPKTPDALRNSSDQFFE 143 >gi|254415491|ref|ZP_05029251.1| hypothetical protein MC7420_4949 [Microcoleus chthonoplastes PCC 7420] gi|196177672|gb|EDX72676.1| hypothetical protein MC7420_4949 [Microcoleus chthonoplastes PCC 7420] Length = 265 Score = 47.8 bits (113), Expect = 7e-04, Method: Composition-based stats. Identities = 31/163 (19%), Positives = 56/163 (34%), Gaps = 24/163 (14%) Query: 16 NLYASSKALGFDIDYRKLLKAFRSRAIVIRAY-YYTTVVGDPEQQFSPLHPLLDWLHYNG 74 NLY + + LL +++ ++ YY + + Q P L G Sbjct: 17 NLYWDLQNVSIQKSAHLLLSFAQTQGHLLAQNVYYNSQCQNQAQAKKP-------LSRLG 69 Query: 75 FQVVAKV--AKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAAL 132 F K+ ++ + + + D +++ SGDG F LV L Sbjct: 70 FDCRDVPCPLKDSADHQLIAHCLKDIHSDRSPDI---------IILVSGDGDFCPLVRNL 120 Query: 133 QRKVKKVTIVSTVLSDPSMASDQLRRQA-DYFMDLAYLKNEIA 174 Q KKV I + + + +L+ D F + L + Sbjct: 121 QSLDKKVIIFAQLGNVK----QKLKDLVQDDFYFVDQLPKLVQ 159 >gi|294495820|ref|YP_003542313.1| hypothetical protein Mmah_1163 [Methanohalophilus mahii DSM 5219] gi|292666819|gb|ADE36668.1| protein of unknown function DUF88 [Methanohalophilus mahii DSM 5219] Length = 169 Score = 47.8 bits (113), Expect = 7e-04, Method: Composition-based stats. Identities = 31/166 (18%), Positives = 57/166 (34%), Gaps = 32/166 (19%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 R I L +DG N+ FD++ ++ + V + + Sbjct: 23 RRSIGLLVDGPNV----LRKEFDVNLEEIRDVLKEYGNVKIGRVFL--------NQYASN 70 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGD 122 L++ + NGF+ V S +DV LAV+ + ++ L + + D Sbjct: 71 KLVEAVENNGFEPVI--------------CSSDVDVRLAVEGMDLVHNPNIDTLALVTRD 116 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F L+ K+ + + S LR +DY + L Sbjct: 117 ADFKPLLNKANEHGKE----TIIFGVEPGFSTALRNSSDYVVILNT 158 >gi|153815213|ref|ZP_01967881.1| hypothetical protein RUMTOR_01447 [Ruminococcus torques ATCC 27756] gi|317502327|ref|ZP_07960496.1| hypothetical protein HMPREF1026_02440 [Lachnospiraceae bacterium 8_1_57FAA] gi|331089931|ref|ZP_08338823.1| hypothetical protein HMPREF1025_02406 [Lachnospiraceae bacterium 3_1_46FAA] gi|145847472|gb|EDK24390.1| hypothetical protein RUMTOR_01447 [Ruminococcus torques ATCC 27756] gi|316896283|gb|EFV18385.1| hypothetical protein HMPREF1026_02440 [Lachnospiraceae bacterium 8_1_57FAA] gi|330403163|gb|EGG82724.1| hypothetical protein HMPREF1025_02406 [Lachnospiraceae bacterium 3_1_46FAA] Length = 323 Score = 47.8 bits (113), Expect = 7e-04, Method: Composition-based stats. Identities = 38/168 (22%), Positives = 64/168 (38%), Gaps = 27/168 (16%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRK-LLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 E+ AL ID N+ S+K Y K +L V Y + GD + S Sbjct: 3 ERFALLIDADNV--SAK-------YIKPILDELSKYGNVT----YKRIYGDWTRPNSA-- 47 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 + L N ++F+ G+ S+M ++ A+D + LE + S D Sbjct: 48 GWKEELLQNSIT----PIQQFSYTYGKNATDSAMIID-AMDML-YASELEGFCLVSSDSD 101 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 FT L + L+ K+V + + R+ + F +L L + Sbjct: 102 FTRLASRLRESGKRVIGMGEAKTPLPF-----RKACEIFTELELLLED 144 >gi|225165548|ref|ZP_03727367.1| conserved hypothetical protein [Opitutaceae bacterium TAV2] gi|224800202|gb|EEG18613.1| conserved hypothetical protein [Opitutaceae bacterium TAV2] Length = 280 Score = 47.4 bits (112), Expect = 7e-04, Method: Composition-based stats. Identities = 34/172 (19%), Positives = 60/172 (34%), Gaps = 32/172 (18%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M + ++IA+ ID N+ S K + D LL R + + T+ + Sbjct: 1 MENNDKRIAVLIDAENV--SFKLVDEIFDEIALLGRVTHRR--VYGDFTTSHMT------ 50 Query: 61 SPLHPLLDWLHYNGFQVVAKV--AKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHL 116 G+ VA ++ T+ K K+S D+ L +DA + + ++ + Sbjct: 51 -------------GWNAVATDFALRQVTQRH-SKNGKNSSDIVLVIDAMDILHAGKVDAI 96 Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 I S D FT L + V L + + + F L Sbjct: 97 CIVSNDNDFTRLAMRIVEAGLDV----IGLGEEGKTGHEFVKACSTFKHLTD 144 >gi|294677711|ref|YP_003578326.1| hypothetical protein RCAP_rcc02189 [Rhodobacter capsulatus SB 1003] gi|294476531|gb|ADE85919.1| protein of unknown function DUF88 [Rhodobacter capsulatus SB 1003] Length = 249 Score = 47.4 bits (112), Expect = 8e-04, Method: Composition-based stats. Identities = 37/167 (22%), Positives = 61/167 (36%), Gaps = 42/167 (25%) Query: 5 REKIALFIDGANL---YASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 E +A+ +DG NL YA AL R+ V Y Q+ + Sbjct: 1 METVAVLVDGDNLSARYAGQIALR-----------ARAFGTVTVRRVYL-----DAQKAT 44 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIF 119 GF+++ + K++ D+ LA+DA E + EG++ VI Sbjct: 45 DWQG-----GPQGFRLM-----------HAGKGKNASDLLLALDAMELALREGVKRFVIA 88 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 S D F+ L L+ ++VT + R + F+ L Sbjct: 89 SSDRDFSHLALRLREYGRQVTGIGETK-----TPQIFRDACETFLTL 130 >gi|256832383|ref|YP_003161110.1| hypothetical protein Jden_1151 [Jonesia denitrificans DSM 20603] gi|256685914|gb|ACV08807.1| hypothetical protein Jden_1151 [Jonesia denitrificans DSM 20603] Length = 388 Score = 47.4 bits (112), Expect = 8e-04, Method: Composition-based stats. Identities = 31/177 (17%), Positives = 58/177 (32%), Gaps = 32/177 (18%) Query: 5 REKIALFIDGANLY--------ASSKALGFDIDYRKLLK------AFRSRAIVIRAYYYT 50 ++ A+F+D L+ A+S + Y L++ S +R Y+Y Sbjct: 2 NKQSAIFVDAGFLHSVGAQRTAATSYRHAVKLQYSTLIRGITHTTRAHSGVENLRTYWY- 60 Query: 51 TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110 + + H + + G +V + E G +D+ LA+D + Sbjct: 61 --DASRDGLLTDEHKRIAMIP--GVKVRLGRVNYYGEQKG-------VDLRLALDLVGLA 109 Query: 111 E--GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDP----SMASDQLRRQAD 161 + SGD T V Q +V ++ + +D L D Sbjct: 110 RTGAASVAYLISGDDDLTEAVEEAQSLGMRVVLLGIDDKSSRIGLASVADNLAFAVD 166 >gi|300024275|ref|YP_003756886.1| hypothetical protein Hden_2769 [Hyphomicrobium denitrificans ATCC 51888] gi|299526096|gb|ADJ24565.1| protein of unknown function DUF88 [Hyphomicrobium denitrificans ATCC 51888] Length = 656 Score = 47.4 bits (112), Expect = 8e-04, Method: Composition-based stats. Identities = 21/132 (15%), Positives = 47/132 (35%), Gaps = 12/132 (9%) Query: 53 VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG 112 D + +GF+V+ +++K+S D+ + +D + Sbjct: 81 AHDNSTDMCSFPFIRHHFQRSGFEVIDCP-------PLTQQLKNSADIRIVMDVSDILNH 133 Query: 113 ---LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMA--SDQLRRQADYFMDLA 167 + +I SGD FT ++ L+ ++ + + + SD +++D L Sbjct: 134 PTFFDEFIILSGDADFTPVLHRLRAHARRTVVYANDHTALPYTAISDGEIKESDLLALLT 193 Query: 168 YLKNEIARDPDE 179 + P E Sbjct: 194 NSRAIAGETPRE 205 >gi|145296960|ref|YP_001139781.1| hypothetical protein cgR_2860 [Corynebacterium glutamicum R] gi|140846880|dbj|BAF55879.1| hypothetical protein [Corynebacterium glutamicum R] Length = 472 Score = 47.4 bits (112), Expect = 8e-04, Method: Composition-based stats. Identities = 33/172 (19%), Positives = 58/172 (33%), Gaps = 29/172 (16%) Query: 6 EKIALFIDGANL---YA----SSKALGFDIDYRKLLKAFRS------RAIVIRAYYYTTV 52 E+ +F+D + L + + +ID +++ + V R +Y + Sbjct: 3 ERTQVFVDTSYLLASFYNSWETGARAQLEIDLPEVVGVLGRMIEQQLKQPVQRQMWYDGI 62 Query: 53 VGDPEQQFSPLHPLLDWLHY-NGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS- 110 S H L +G Q+ A E+ G +R + ++D L D Sbjct: 63 PD------SGPHRYQRALRTCDGVQLRAGQLIEW----GERRTQKAVDTRLVADLVLAGV 112 Query: 111 -EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161 +V+ SGD V +V + SM+S LR D Sbjct: 113 RGQCSDIVLVSGDADMIPGVQEAANAGLRVHLYGF--GWDSMSSQ-LRHCCD 161 >gi|23308996|ref|NP_602135.2| hypothetical protein NCgl2847 [Corynebacterium glutamicum ATCC 13032] gi|62391787|ref|YP_227189.1| hypothetical protein cg3263 [Corynebacterium glutamicum ATCC 13032] gi|21325721|dbj|BAC00342.1| Hypothetical protein [Corynebacterium glutamicum ATCC 13032] gi|41327129|emb|CAF20973.1| conserved hypothetical protein [Corynebacterium glutamicum ATCC 13032] Length = 472 Score = 47.4 bits (112), Expect = 8e-04, Method: Composition-based stats. Identities = 33/172 (19%), Positives = 58/172 (33%), Gaps = 29/172 (16%) Query: 6 EKIALFIDGANL---YA----SSKALGFDIDYRKLLKAFRS------RAIVIRAYYYTTV 52 E+ +F+D + L + + +ID +++ + V R +Y + Sbjct: 3 ERTQVFVDTSYLLASFYNSWETGARAQLEIDLPEVVGVLGRMIEQQLKQPVQRQMWYDGI 62 Query: 53 VGDPEQQFSPLHPLLDWLHY-NGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS- 110 S H L +G Q+ A E+ G +R + ++D L D Sbjct: 63 PD------SGPHRYQRALRTCDGVQLRAGQLIEW----GERRTQKAVDTRLVADLVLAGV 112 Query: 111 -EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161 +V+ SGD V +V + SM+S LR D Sbjct: 113 RGQCSDIVLVSGDADMIPGVQEAANAGLRVHLYGF--GWDSMSSQ-LRHCCD 161 >gi|51102893|gb|AAT96043.1| hypothetical protein [Pseudomonas viridiflava] Length = 280 Score = 47.4 bits (112), Expect = 8e-04, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 40/101 (39%), Gaps = 7/101 (6%) Query: 76 QVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQ 133 +V+ + + + + + K++ D L +DA + + + + S D FT L + L+ Sbjct: 69 KVLLENSIQPIQQFAYTKGKNATDSSLIIDAMDLLYTRRFDGFCLVSSDSDFTRLASRLR 128 Query: 134 RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 + V + S S D F+ L+ E+ Sbjct: 129 EEGLTVYGFGEEKTPKSFVS-----ACDKFIYTELLRAEVQ 164 >gi|75674368|ref|YP_316789.1| hypothetical protein Nwi_0169 [Nitrobacter winogradskyi Nb-255] gi|74419238|gb|ABA03437.1| Protein of unknown function DUF88 [Nitrobacter winogradskyi Nb-255] Length = 271 Score = 47.4 bits (112), Expect = 8e-04, Method: Composition-based stats. Identities = 34/186 (18%), Positives = 59/186 (31%), Gaps = 41/186 (22%) Query: 3 DPREKI---ALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59 +PR+++ A+FID N V + + Sbjct: 4 EPRQRLPRFAVFIDAEN--------------------------VPPKFADGIFREIAQLG 37 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKS--SMDVELAVDAFEQSE--GLEH 115 +P+ + L + +V + + VK S D+ + +DA + + Sbjct: 38 DAPVRLIYGNLSDPNLKGWTEVLPDHSLERRDPAVKGRNSADMAIVIDAMDLLHDGRIHG 97 Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 + S D FT L A L+R+ V D RR + F+ L L + R Sbjct: 98 FCLISSDSDFTGLAARLRREGANVYGFGEKK-----TPDCFRRACNRFISLESL---LPR 149 Query: 176 DPDEDK 181 P Sbjct: 150 KPARKP 155 >gi|302558564|ref|ZP_07310906.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000] gi|302476182|gb|EFL39275.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000] Length = 305 Score = 47.4 bits (112), Expect = 8e-04, Method: Composition-based stats. Identities = 34/186 (18%), Positives = 59/186 (31%), Gaps = 31/186 (16%) Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAIVIRA-------YYYTTVV 53 A+F+D LYA++ L FD+D L+ A RA + A Y+Y Sbjct: 42 AIFVDAGYLYAAAGRLVTGTEDRRAFDLDAEGLIDALIDRARTVFADSRLLRVYWYDGAR 101 Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112 L K N + +D + D + Sbjct: 102 RRIHTAEQQTIAELP------------DVKVRLGNLNANNQQKGVDSLIRSDLESLARHR 149 Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169 + + GD + V A Q +V + + ++ L + D +DL + Sbjct: 150 AISDAALLGGDEDLVSAVEAAQGYGARVHLWGIEAPEGRNQAEPLLWEVDSQRTLDLDFF 209 Query: 170 KNEIAR 175 K ++R Sbjct: 210 KPYVSR 215 >gi|51102938|gb|AAT96087.1| hypothetical protein [Pseudomonas viridiflava] Length = 280 Score = 47.4 bits (112), Expect = 8e-04, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 40/101 (39%), Gaps = 7/101 (6%) Query: 76 QVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQ 133 +V+ + + + + + K++ D L +DA + + + + S D FT L + L+ Sbjct: 69 KVLLENSIQPIQQFAYTKGKNATDSSLIIDAMDLLYTRRFDGFCLVSSDSDFTRLASRLR 128 Query: 134 RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 + V + S S D F+ L+ E+ Sbjct: 129 EEGLTVYGFGEEKTPKSFVS-----ACDKFIYTELLRAEVQ 164 >gi|328768035|gb|EGF78082.1| hypothetical protein BATDEDRAFT_26780 [Batrachochytrium dendrobatidis JAM81] Length = 491 Score = 47.4 bits (112), Expect = 8e-04, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 35/105 (33%), Gaps = 16/105 (15%) Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEH 115 + + + + L +G V+ + D + VD + Sbjct: 193 RETFIKSMRSELQSSGCSVIDTPHNGRKDAA---------DKMIMVDMLSYIIDTPAPAT 243 Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160 +V+ SGD F +A LQ + V ++ + LR QA Sbjct: 244 IVLISGDRDFLYALAVLQNRGYNVVLIVPNRGASPI----LRAQA 284 >gi|110637857|ref|YP_678064.1| hypothetical protein CHU_1453 [Cytophaga hutchinsonii ATCC 33406] gi|110280538|gb|ABG58724.1| conserved hypothetical protein [Cytophaga hutchinsonii ATCC 33406] Length = 258 Score = 47.4 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 33/174 (18%), Positives = 56/174 (32%), Gaps = 35/174 (20%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 +K+A+ ID N+ S + +++L+ Y Sbjct: 13 MKEDKLAVLIDADNVPYS--------NVKEMLEEISKNGTPTIKRIYA------------ 52 Query: 63 LHPLLDWLHY--NGFQ-VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLV 117 DW +G++ V+ + A + K+S D L +DA + S + Sbjct: 53 -----DWTKPTVSGWKSVLLENAITPIQQYSYTTGKNSSDSALIIDAMDILYSGKVNGFC 107 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 I S D FT L L+ V + S D F+ + LK Sbjct: 108 IVSSDSDFTRLATRLREAGMTVIGFGEKKTPKPFIS-----ACDKFIYIEILKA 156 >gi|118470413|ref|YP_885602.1| hypothetical protein MSMEG_1210 [Mycobacterium smegmatis str. MC2 155] gi|118171700|gb|ABK72596.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length = 289 Score = 47.4 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 28/140 (20%), Positives = 46/140 (32%), Gaps = 20/140 (14%) Query: 28 IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTE 87 +D +L S ++ Y D + Q+V + Sbjct: 50 VDVGAILDFASSFGTLVLTRAYADWSADVNAGYRQ-------------QLVGRAVDLVQL 96 Query: 88 NCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVST 144 K+ D+ LAVDA E L H+VI +GD + L +R + V + Sbjct: 97 FPAAAYGKNGADIRLAVDAVEDMFRLPDLTHVVIVAGDSDYIPLAQRCKRLGRYVVGIGV 156 Query: 145 VLSDPSMASDQLRRQADYFM 164 + +S L D F+ Sbjct: 157 AGA----SSRALAAACDEFI 172 >gi|240171215|ref|ZP_04749874.1| hypothetical protein MkanA1_18021 [Mycobacterium kansasii ATCC 12478] Length = 289 Score = 47.0 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 34/189 (17%), Positives = 58/189 (30%), Gaps = 41/189 (21%) Query: 7 KIALFIDGANLYAS-----------SKALGFDIDYRKLL----------KAFRSRAIVIR 45 ++A++ D N+ S K G +D +L S ++ Sbjct: 8 RVAVYFDFDNIVISRYDQVHGRGTFQKDKGKGLDPERLRAATVDLGAIMDFASSFGTLVL 67 Query: 46 AYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVD 105 Y + ++ Q+V + K+ D+ LAVD Sbjct: 68 TRAYADWSAEVNARYHG-------------QLVGRAVDLVQLFPAAAYGKNGADIRLAVD 114 Query: 106 AFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADY 162 A E L H+VI GD + L +R + V + + +S L D Sbjct: 115 AVEDMFRLPDLTHVVIVGGDSDYIALAQRCKRLGRYVVGIGVAGA----SSQSLAAACDE 170 Query: 163 FMDLAYLKN 171 F+ L Sbjct: 171 FVTYDTLPG 179 >gi|297202206|ref|ZP_06919603.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083] gi|297148057|gb|EDY57683.2| conserved hypothetical protein [Streptomyces sviceus ATCC 29083] Length = 300 Score = 47.0 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 35/186 (18%), Positives = 65/186 (34%), Gaps = 31/186 (16%) Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53 A+F+D LYA++ L FD+D L++A RA ++R Y+Y Sbjct: 37 AIFVDAGYLYAAAGRLVAGTEDRRAFDLDAEGLIEALIDRARTIFADSRLLRVYWY---D 93 Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112 G + + + L K N + +D + D + Sbjct: 94 GARRRIHTTEQQSIAELP---------DVKVRLGNLNANNQQKGVDSLIRSDLESLARHR 144 Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169 + + GD + V A Q +V + + ++ L + D +DL + Sbjct: 145 AISDAALLGGDEDLVSAVEAAQGYGARVHLWGIEAPEGRNQAEPLLWEVDSQRTLDLDFF 204 Query: 170 KNEIAR 175 K ++R Sbjct: 205 KPYVSR 210 >gi|294631254|ref|ZP_06709814.1| conserved hypothetical protein [Streptomyces sp. e14] gi|292834587|gb|EFF92936.1| conserved hypothetical protein [Streptomyces sp. e14] Length = 305 Score = 47.0 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 35/186 (18%), Positives = 63/186 (33%), Gaps = 31/186 (16%) Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAIVIRA-------YYYTTVV 53 A+F+D LYA++ L FD+D L+ A RA + A Y+Y Sbjct: 41 AIFVDAGYLYAAAGRLVAGTEDRRAFDLDAEGLIDALIDRARTVFADSRLLRVYWY---D 97 Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112 G + + + L K N + +D + D + Sbjct: 98 GARRRIHTAEQQSIAELP---------DVKVRLGNLNANNQQKGVDSLIRSDLESLARHR 148 Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169 + + GD + V A Q +V + + ++ L + D +DL + Sbjct: 149 AISDAALLGGDEDLVSAVEAAQGYGARVHLWGIEAPEGRNQAEPLLWEVDSQRTLDLDFF 208 Query: 170 KNEIAR 175 K ++R Sbjct: 209 KPYVSR 214 >gi|302341970|ref|YP_003806499.1| hypothetical protein Deba_0533 [Desulfarculus baarsii DSM 2075] gi|301638583|gb|ADK83905.1| protein of unknown function DUF88 [Desulfarculus baarsii DSM 2075] Length = 438 Score = 47.0 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 29/168 (17%), Positives = 62/168 (36%), Gaps = 19/168 (11%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 + IA++ D N+++S L + D+ L FR + + Q ++ Sbjct: 1 MKNIAVYWDFENIHSSLCNLRYGEDW---LDQFRGQRHPAVVDIGAIMQFAESQGSVNIN 57 Query: 65 P-LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSS-----MDVELAVDAF---EQSEGLEH 115 +W Y + + EFT + + + D+ LA+DA + E L Sbjct: 58 KAYGNWAWYQQY---SHDLHEFTFDLVQLFPRGMNMKNGADIRLAIDALDDLNRHEHLSV 114 Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163 +I GD + +L ++++ K++ + + + F Sbjct: 115 FIIVGGDSDYISLAQRVRQRGKEI----IGIGVRETTNKFWINACNDF 158 >gi|71004032|ref|XP_756682.1| hypothetical protein UM00535.1 [Ustilago maydis 521] gi|46095754|gb|EAK80987.1| hypothetical protein UM00535.1 [Ustilago maydis 521] Length = 847 Score = 47.0 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 51/146 (34%), Gaps = 15/146 (10%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDY--RKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 D E IA+F D N + + G + R ++ F ++ Y + + + Sbjct: 85 DDAEPIAIFWDVDNCAPPTGSSGRSVALAVRTAIQNFEIGP-IVSFKAYLELSSETQAPN 143 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLV 117 + L L G ++ GRK V D + D + +V Sbjct: 144 AAQVQLRSELQGCGVSLIDTPK------SGRKDV---ADKMMITDLLAYAIDQPAPATVV 194 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVS 143 + SGD F + L+ + V +V+ Sbjct: 195 LISGDRDFAYPLGILRNRGYNVVLVT 220 >gi|240103392|ref|YP_002959701.1| hypothetical protein TGAM_1335 [Thermococcus gammatolerans EJ3] gi|239910946|gb|ACS33837.1| Conserved hypothetical protein [Thermococcus gammatolerans EJ3] Length = 166 Score = 47.0 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 34/164 (20%), Positives = 61/164 (37%), Gaps = 32/164 (19%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 P++KI L IDG N+ F I +++A V A Q++P Sbjct: 19 HPKKKIGLIIDGPNI----LRKEFGIKLEDIIEALNRIGSVRIAKVIL-------NQYAP 67 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 L++ + G + V V DV +A++ E + ++ + + S Sbjct: 68 -QGLVEAIVNQGLEPVI--------------VAGDTDVRVAIETMEMIYTADVDVIALAS 112 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 D F L+ +R K+ ++ S L+ ADY + Sbjct: 113 RDADFLPLIIEAKRHGKETVVIGVEPGF----SVALQNAADYVI 152 >gi|325186423|emb|CCA20928.1| conserved hypothetical protein [Albugo laibachii Nc14] Length = 304 Score = 47.0 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 37/181 (20%), Positives = 67/181 (37%), Gaps = 19/181 (10%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAI-VIRAYYYTTVVGDPEQQFSPLHPL 66 AL IDGA + + G +DY KL K + IR +Y D + + + Sbjct: 11 TALIIDGAYAEINGQKKG-GLDYLKLRKFLEEKGKAQIRERWY--FTHDRRKYTTSFFTM 67 Query: 67 LDWLHYNG--FQVVAKVAKEFTENCGR------KRVKSSMDVELAVDAFEQS--EGLEHL 116 + G FQ+ K + C R + V+ +D +A + + Sbjct: 68 IKSAPPLGPQFQLKVYGTKSYACRCKRCHYRFSQFVQKGVDNGIATKLLSLAYENVCDRF 127 Query: 117 VIFSGDGCFTTLVAALQR-KVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 ++ +GDG F + ++ K++ +V S S L++ A + L + R Sbjct: 128 ILLAGDGDFYDSLYQVKNVLRKEIWVVGFRDS----VSADLQQLASMIIWLDDHWQGVQR 183 Query: 176 D 176 Sbjct: 184 H 184 >gi|237808105|ref|YP_002892545.1| hypothetical protein Tola_1344 [Tolumonas auensis DSM 9187] gi|237500366|gb|ACQ92959.1| protein of unknown function DUF88 [Tolumonas auensis DSM 9187] Length = 277 Score = 47.0 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 36/174 (20%), Positives = 57/174 (32%), Gaps = 29/174 (16%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 +P ++A+ ID N AS ID LLK S A S Sbjct: 14 EPTLRLAVLIDADNAQASV------ID--GLLKEVASFGE---ATVKRIYGDFTSPASSQ 62 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 +L+ K ++F G+ D L +DA + + + + S Sbjct: 63 WKKVLNQYA-------IKPVQQFAYTTGKNAT----DSTLIIDAMDLLYTRRFDGFCLVS 111 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 D FT L ++ + +TIV D R F+ YL+ + Sbjct: 112 SDSDFTGLALRIREEG--LTIVGFGEQK---TPDAFRNACHKFIFTEYLRPTVQ 160 >gi|332672160|ref|YP_004455168.1| hypothetical protein Celf_3674 [Cellulomonas fimi ATCC 484] gi|332341198|gb|AEE47781.1| hypothetical protein Celf_3674 [Cellulomonas fimi ATCC 484] Length = 377 Score = 47.0 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 35/189 (18%), Positives = 69/189 (36%), Gaps = 32/189 (16%) Query: 7 KIALFIDGANLYASSKALGFDIDYRK-LLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 ++A++ID N+ S +D +R+ + +R + A V + + Sbjct: 8 RVAVYIDFDNIVIS----RYDQTFRRGEWQRDSARQHRMDAASDDLVDRRLAEARVDVGA 63 Query: 66 LLDWLHYNGFQVVAKVA------------KEFTENCGRKR--------VKSSMDVELAVD 105 +LD+ G VV++ ++ + VK+ D+ L+VD Sbjct: 64 ILDYASSFGSVVVSRAYADWSVPANAGYQRQLVDRAVDLTQLFPVTAGVKNGADIRLSVD 123 Query: 106 AFE---QSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADY 162 E + + H+V+ +GD + L +R + V + + S L D Sbjct: 124 VVEDLFRLPDVTHVVVVAGDSDYIALAQRAKRLGRYVVGIGVAGA----TSRALMAACDE 179 Query: 163 FMDLAYLKN 171 F D L + Sbjct: 180 FADYDDLLD 188 >gi|319948971|ref|ZP_08023074.1| hypothetical protein ES5_06227 [Dietzia cinnamea P4] gi|319437361|gb|EFV92378.1| hypothetical protein ES5_06227 [Dietzia cinnamea P4] Length = 361 Score = 47.0 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 30/92 (32%), Gaps = 14/92 (15%) Query: 90 GRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLS 147 G +R + ++D L D + + +V+ +GD V ++ +V Sbjct: 10 GERRTQKAVDTLLVADMIQAAYKGHCSDMVLVTGDADMIPGVRVAVDAGVRMHLVGFGWD 69 Query: 148 DPSMASDQLRRQAD---------YFMDLAYLK 170 S LR D F D ++ Sbjct: 70 S---ISSALRHACDTTTVLDPRTDFHDAMQIR 98 >gi|302890921|ref|XP_003044343.1| hypothetical protein NECHADRAFT_62469 [Nectria haematococca mpVI 77-13-4] gi|256725266|gb|EEU38630.1| hypothetical protein NECHADRAFT_62469 [Nectria haematococca mpVI 77-13-4] Length = 262 Score = 47.0 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 33/165 (20%), Positives = 57/165 (34%), Gaps = 29/165 (17%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 K+A+ ID N+ + + G ++L I Y + L+ Sbjct: 8 KLAVLIDSDNV--TPRVAG------QVLAEVAKYGIAFVKRAY------GDWTGPGLNSW 53 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGC 124 D L N Q ++F+ G K+S D + +DA + S + + S D Sbjct: 54 KDHLLDNSIQ----PIQQFSYTKG----KNSTDSAMIIDAMDLLYSNKFDGFCLVSSDSD 105 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 FT L + ++ V + L R D F+ + L Sbjct: 106 FTRLASRIRESGLVVYGFGERK-----TPNSLVRACDKFIYIENL 145 >gi|21673303|ref|NP_661368.1| hypothetical protein CT0467 [Chlorobium tepidum TLS] gi|21646394|gb|AAM71710.1| conserved hypothetical protein [Chlorobium tepidum TLS] Length = 426 Score = 47.0 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 58/184 (31%), Gaps = 29/184 (15%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M RE IA+ ID N + ID+ +L +V Y + Sbjct: 1 MEHSRETIAMLIDADN------SPSDKIDF--ILAEMAKYGVVNIRRAY------GNWKS 46 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118 L D LH + + + ++F G+ D+ + +D + S+ L+ I Sbjct: 47 HSLKGWEDKLHD--YAI--RPIQQFDYTKGKNAT----DMAMTIDGMDLLFSKKLDAFCI 98 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178 S D FT LV + + V F+ L E + Sbjct: 99 VSSDSDFTPLVMRILSEGLNV-----YGFGQKSTPLPFVNACSTFLYLDSFAGEKEQTKS 153 Query: 179 EDKK 182 + + Sbjct: 154 DSCR 157 >gi|316935522|ref|YP_004110504.1| hypothetical protein Rpdx1_4219 [Rhodopseudomonas palustris DX-1] gi|315603236|gb|ADU45771.1| hypothetical protein Rpdx1_4219 [Rhodopseudomonas palustris DX-1] Length = 266 Score = 47.0 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 18/95 (18%), Positives = 36/95 (37%), Gaps = 7/95 (7%) Query: 77 VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQR 134 ++AK A + K++ D+ L +DA + S + + S D FT L + ++ Sbjct: 57 ILAKHAIIPQQQFAYTTGKNASDITLVIDAMDLLHSGRFDGFCLVSSDSDFTRLASRIRE 116 Query: 135 KVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 + V + + R+ F+ L Sbjct: 117 QGVDV----FGFGEQK-TPESFRQACRRFVYTENL 146 >gi|260428850|ref|ZP_05782827.1| conserved hypothetical protein [Citreicella sp. SE45] gi|260419473|gb|EEX12726.1| conserved hypothetical protein [Citreicella sp. SE45] Length = 236 Score = 47.0 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 15/73 (20%), Positives = 29/73 (39%), Gaps = 7/73 (9%) Query: 99 DVELAVDAFEQSE--GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156 D+ L +DA + + V+ S D FT L + ++ + + + + D Sbjct: 77 DISLVIDAMDLMHTARFDGFVLVSSDSDFTRLASRIREQG----LDAYGMGMQK-TPDAF 131 Query: 157 RRQADYFMDLAYL 169 R+ F+ L L Sbjct: 132 RKACKRFIFLENL 144 >gi|329939623|ref|ZP_08288924.1| hypothetical protein SGM_4416 [Streptomyces griseoaurantiacus M045] gi|329301193|gb|EGG45088.1| hypothetical protein SGM_4416 [Streptomyces griseoaurantiacus M045] Length = 302 Score = 47.0 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 34/186 (18%), Positives = 65/186 (34%), Gaps = 31/186 (16%) Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53 A+F+D LYA++ L FD+D L++A +A ++R Y+Y Sbjct: 38 AIFVDAGYLYAAAGRLVAGTEDRRAFDVDAEGLIEALIDKARTIFADSRLLRVYWY---D 94 Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112 G + + + L K N + +D + D + Sbjct: 95 GARRRIHTAEQQSIAELP---------DVKVRLGNLNANNQQKGVDSLIRSDLESLARHR 145 Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169 + + GD + V A Q +V + + ++ L + D +DL + Sbjct: 146 AISDAALLGGDEDLVSAVEAAQGYGARVHLWGIEAPEGRNQAEPLLWEVDSQRTLDLDFF 205 Query: 170 KNEIAR 175 K ++R Sbjct: 206 KPYVSR 211 >gi|323508074|emb|CBQ67945.1| conserved hypothetical protein [Sporisorium reilianum] Length = 856 Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 26/146 (17%), Positives = 51/146 (34%), Gaps = 15/146 (10%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRS--RAIVIRAYYYTTVVGDPEQQF 60 + E IA+F D N + + G + + A ++ ++ Y + + + Sbjct: 86 EDTEPIAIFWDVDNCAPPTGSSGRSVAL-AVRSAIQNLDVGPIVSFKAYLELSSETQAPN 144 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLV 117 + L L G ++ GRK V D + D + +V Sbjct: 145 AAQVQLRSELQGCGVSLIDTPK------SGRKDV---ADKMMITDLLAYAIDQPAPATVV 195 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVS 143 + SGD F + L+ + V +V+ Sbjct: 196 LISGDRDFAYPLGILRNRGYNVVLVT 221 >gi|332653782|ref|ZP_08419526.1| conserved hypothetical protein [Ruminococcaceae bacterium D16] gi|332516868|gb|EGJ46473.1| conserved hypothetical protein [Ruminococcaceae bacterium D16] Length = 291 Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 35/92 (38%), Gaps = 11/92 (11%) Query: 81 VAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKK 138 ++++ G K+S D + +DA + S + V+ S D FT L L+ K Sbjct: 94 PIQQYSYTTG----KNSTDSAMIIDAMDILYSGTCDGFVLVSSDSDFTRLATRLREAGMK 149 Query: 139 VTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170 V + + D F+ + ++ Sbjct: 150 VYGMGEKKTPKPF-----IVACDKFVYIEVIR 176 >gi|315231506|ref|YP_004071942.1| hypothetical protein TERMP_01744 [Thermococcus barophilus MP] gi|315184534|gb|ADT84719.1| hypothetical protein TERMP_01744 [Thermococcus barophilus MP] Length = 175 Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 32/171 (18%), Positives = 61/171 (35%), Gaps = 36/171 (21%) Query: 8 IALFIDGANLYASSKALGFDI-DYRKLLKAFRS-RAIVIRAYYYTTVVGDPEQQFSPLHP 65 I L IDG N+ K G + D ++ L+ R + Y Sbjct: 27 IGLIIDGPNILR--KEFGIRLEDIKEALERIGKIRVAKVVLNQYAP------------QG 72 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDG 123 L++ + GF+ + V DV +A++A E ++ + I + D Sbjct: 73 LIEAVVNQGFEPII--------------VAGDTDVRIAIEAMELIYNSDVDIIAIATRDA 118 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 F +++ +RK K+ ++ S L+ ADY + + + Sbjct: 119 DFLPIISEAKRKGKETIVIGVEPGF----SVALQNAADYVIKMEGRGEGVG 165 >gi|110833552|ref|YP_692411.1| hypothetical protein ABO_0691 [Alcanivorax borkumensis SK2] gi|110646663|emb|CAL16139.1| conserved hypothetical protein [Alcanivorax borkumensis SK2] Length = 252 Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 49/121 (40%), Gaps = 12/121 (9%) Query: 68 DWLHYN--GFQ-VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGD 122 DW N G++ V+ K + + + + K++ D + +DA + S+ L + S D Sbjct: 53 DWTKPNLGGWKSVLLKHSIQPIQQFAYTQGKNATDCSMIIDAMDLLYSKQLSGFCLVSSD 112 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE--IARDPDED 180 FT L A L+ + V + + D F+ L+++ PD+ Sbjct: 113 SDFTRLAARLREEGLTVYGFGERKTPGPFVA-----ACDKFIYTEVLRSDHAPQHTPDKP 167 Query: 181 K 181 + Sbjct: 168 Q 168 >gi|90418798|ref|ZP_01226709.1| conserved hypothetical protein [Aurantimonas manganoxydans SI85-9A1] gi|90336878|gb|EAS50583.1| conserved hypothetical protein [Aurantimonas manganoxydans SI85-9A1] Length = 273 Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 18/98 (18%), Positives = 37/98 (37%), Gaps = 7/98 (7%) Query: 77 VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQR 134 V+++ A + K++ D+ L +DA + S + + S D FT L A ++ Sbjct: 59 VLSRHAIIPQQQFAYTTGKNASDITLVIDAMDLLHSGRFDGFCLVSSDSDFTRLAARIRE 118 Query: 135 KVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 + V + + R+ F+ L + Sbjct: 119 QG--VDVYGFGEQK---TPESFRQACRRFIYTENLLPQ 151 >gi|189016716|ref|YP_001711755.1| hypothetical protein CMS_pCSL0024 [Clavibacter michiganensis subsp. sepedonicus] gi|167728887|emb|CAQ03269.1| hypothetical protein pCSL0024 [Clavibacter michiganensis subsp. sepedonicus] Length = 195 Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 26/165 (15%), Positives = 52/165 (31%), Gaps = 24/165 (14%) Query: 10 LFIDGANLYASS----KALGFDIDYRKLLKAFRSRAIVIRAYY--------------YTT 51 LFID NL+ S+ + G + Y L+ + V+ A Y Sbjct: 6 LFIDYQNLHFSAWETFTSYGSAV-YDSLIHPGKFGDQVLAARAARNFPELELTKIHVYRG 64 Query: 52 V---VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE 108 + +P Q +W + + K + + +DV LA+ + Sbjct: 65 LPSRKREPGQHARVQRQASNWTRDPRVVMSLRALKYPRDWPDEPSQEKGIDVLLAIQVVQ 124 Query: 109 QS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSM 151 S + L++ + D + +Q ++T + Sbjct: 125 ASIESAADTLIVSTRDTDILPALELVQSTGNTALELATWKGQSEL 169 >gi|29829642|ref|NP_824276.1| hypothetical protein SAV_3100 [Streptomyces avermitilis MA-4680] gi|29606750|dbj|BAC70811.1| hypothetical protein [Streptomyces avermitilis MA-4680] Length = 298 Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 33/186 (17%), Positives = 64/186 (34%), Gaps = 31/186 (16%) Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53 A+F+D LYA++ L F++D L++A +A ++R Y+Y Sbjct: 34 AIFVDAGYLYAAAGRLVAGTEDRRAFELDAEGLIEALIDKARTIFADSRLLRVYWY---D 90 Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112 G + + + L K N + +D + D + Sbjct: 91 GARRRIHTAEQQSIAELP---------DVKVRLGNLNANNQQKGVDSLIRTDLESLARHR 141 Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169 + + GD + V A Q +V + + ++ L + D DL + Sbjct: 142 AISDAALLGGDEDLVSAVEAAQGYGARVHLWGIEAPEGRNQAEPLLWEVDSQRTFDLDFF 201 Query: 170 KNEIAR 175 K ++R Sbjct: 202 KPYVSR 207 >gi|299133322|ref|ZP_07026517.1| protein of unknown function DUF88 [Afipia sp. 1NLS2] gi|298593459|gb|EFI53659.1| protein of unknown function DUF88 [Afipia sp. 1NLS2] Length = 245 Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 18/95 (18%), Positives = 37/95 (38%), Gaps = 7/95 (7%) Query: 77 VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQR 134 ++ + A + + + K++ D+ L +DA + S + + S D FT L + L+ Sbjct: 57 ILQRHAIDPYQQFAYTKGKNASDIALVIDAMDLLHSGRFDGFCLVSSDSDFTRLASRLRE 116 Query: 135 KVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 + V T + R+ F+ L Sbjct: 117 QGADVYGFGTQK-----TPESFRQACRRFVYTENL 146 >gi|319943364|ref|ZP_08017646.1| hypothetical protein HMPREF0551_0492 [Lautropia mirabilis ATCC 51599] gi|319743179|gb|EFV95584.1| hypothetical protein HMPREF0551_0492 [Lautropia mirabilis ATCC 51599] Length = 323 Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 29/70 (41%), Gaps = 5/70 (7%) Query: 98 MDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVS---TVLSDPSMA 152 +D + D E + + + +GDG F + Q+K ++ ++ T L Sbjct: 107 VDSLIVTDLIELASNGAISDAALVTGDGDFAIGIEMAQKKGVRIAVIGVEDTELGVSHRQ 166 Query: 153 SDQLRRQADY 162 S ++ +AD Sbjct: 167 SFEITSRADR 176 >gi|304314246|ref|YP_003849393.1| hypothetical protein MTBMA_c04840 [Methanothermobacter marburgensis str. Marburg] gi|302587705|gb|ADL58080.1| conserved hypothetical protein [Methanothermobacter marburgensis str. Marburg] Length = 173 Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 27/161 (16%), Positives = 59/161 (36%), Gaps = 32/161 (19%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 I L +DG N+ +L D+ + + + R + Y + L+ Sbjct: 26 IGLLVDGPNMLRKEFSLNLDLVRKIMSEYGNMRVGKVLLNQYASD------------KLI 73 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCF 125 + + GF + V DV +AV+A E ++ + + + D F Sbjct: 74 EAIVNQGFTPIV--------------VAGDTDVYMAVEAMELIYNPNIDIIALMTRDADF 119 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 ++ + K ++ ++P ++ L+ AD+ + L Sbjct: 120 LPIINKAKENGKDTIVIG---AEPGFSA-ALQNSADHAIIL 156 >gi|288561663|ref|YP_003429069.1| hypothetical protein BpOF4_20909 [Bacillus pseudofirmus OF4] gi|288548295|gb|ADC52177.1| hypothetical protein BpOF4_20909 [Bacillus pseudofirmus OF4] Length = 191 Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 1/49 (2%) Query: 95 KSSMDVELAVDAFEQS-EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIV 142 + +DVELA+D ++++ EG E L++FSGD + + KV V Sbjct: 97 EKGVDVELALDIYQKALEGYELLIVFSGDSDLVPAIERAKALGTKVVAV 145 >gi|148550669|ref|YP_001260108.1| hypothetical protein Swit_5232 [Sphingomonas wittichii RW1] gi|148503088|gb|ABQ71341.1| protein of unknown function DUF88 [Sphingomonas wittichii RW1] Length = 284 Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 32/170 (18%), Positives = 56/170 (32%), Gaps = 29/170 (17%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 P +IAL ID N+ + +G +L Y + L Sbjct: 11 PTRRIALLIDADNVSHA--KIG------AILAELSKYGTANIRRAY------GNWAAATL 56 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSG 121 LH + ++F+ + G+ D+ L +DA E ++ L+ I S Sbjct: 57 KGWTGKLHDF----AIRPIQQFSYSTGKNAT----DIALVIDAMELLYTQDLDAFAIASS 108 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 D FT L+ L+ +V + F+ L L++ Sbjct: 109 DADFTPLIMQLKANGHEVYGFGERKTPTPFV-----NACTTFLFLDGLED 153 >gi|319953532|ref|YP_004164799.1| hypothetical protein Celal_2004 [Cellulophaga algicola DSM 14237] gi|319422192|gb|ADV49301.1| Domain of unknown function DUF88 [Cellulophaga algicola DSM 14237] Length = 252 Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 22/103 (21%), Positives = 40/103 (38%), Gaps = 7/103 (6%) Query: 82 AKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKV 139 A + G K++ D + +DA + SE + + S D FT L L+ KV Sbjct: 59 AITPIQQYGYTTGKNATDSAMIIDAMDILYSEKVNGFCLVSSDSDFTRLATRLREAGMKV 118 Query: 140 TIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182 + + D F+ + LK++I ++ +K Sbjct: 119 IGIGEKKTPNPF-----IVACDKFIYIEILKSKIESPENDSEK 156 >gi|302385690|ref|YP_003821512.1| hypothetical protein Closa_1286 [Clostridium saccharolyticum WM1] gi|302196318|gb|ADL03889.1| conserved hypothetical protein [Clostridium saccharolyticum WM1] Length = 308 Score = 46.3 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 31/171 (18%), Positives = 58/171 (33%), Gaps = 29/171 (16%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +K A+ ID N+ S+K + +L ++ Y + S + Sbjct: 3 SDKKFAVLIDSDNI--SAKYITC------ILDEMTRYGVITYKRIY------GDWTSSQM 48 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSG 121 L N ++F+ G+ D L +DA + ++ ++ I S Sbjct: 49 GKWKMELLENSIT----PIQQFSNTVGKNAT----DSALIIDAMDLLYTDHVDGFCIVSS 100 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 D FT L + L+ K+V + R F +L L ++ Sbjct: 101 DSDFTRLASRLRESGKEVIGMGEDK-----TPKSFRAACTVFTNLEVLLDQ 146 >gi|304315197|ref|YP_003850344.1| hypothetical protein MTBMA_c14520 [Methanothermobacter marburgensis str. Marburg] gi|302588656|gb|ADL59031.1| conserved hypothetical protein [Methanothermobacter marburgensis str. Marburg] Length = 157 Score = 46.3 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 31/168 (18%), Positives = 62/168 (36%), Gaps = 36/168 (21%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRK--LLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 + ++ + L +DG N+ K D+D+ K L+ R + Y + Sbjct: 17 EDKKNLGLLVDGPNMLR--KEFCSDLDFVKNLLVDRGNLRVGKVLLNQYASD-------- 66 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVI 118 L++ + GF + V +DV+LAV+AFE ++ + + Sbjct: 67 ----KLIEAVVNQGFSPMI--------------VAGDVDVQLAVEAFELIHNPHIDVVAL 108 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 + + F L+ + K+ ++ S L+ AD + L Sbjct: 109 MTRNADFLPLINIAKENGKETLVIGAEPGF----SIALQNSADDSIKL 152 >gi|149203752|ref|ZP_01880721.1| hypothetical protein RTM1035_06788 [Roseovarius sp. TM1035] gi|149142869|gb|EDM30911.1| hypothetical protein RTM1035_06788 [Roseovarius sp. TM1035] Length = 232 Score = 46.3 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 33/176 (18%), Positives = 61/176 (34%), Gaps = 45/176 (25%) Query: 2 FDPREKIALFIDGANL--YASSKALGFDIDYRKLLKAFRSRAI--VIRAYYYTTVVGDPE 57 P +++ F+D N+ + R +L R ++RAY ++ D Sbjct: 9 LTPAPRLSAFVDAENIPVTHA----------RTILDLARRYGDPDLLRAYGNVGLLSD-- 56 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEH 115 W GFQ + K++ D+ + VDA E S+ Sbjct: 57 -----------WDKLPGFQFI-----------HSGCGKNATDMLICVDAMERALSDQCAA 94 Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 +++ S D FT L L+ V + + + S++ R F +L + Sbjct: 95 VLLVSSDQDFTHLATRLRGYGLTV-----IGAGEAKTSERFRAACSVFEELEGCRE 145 >gi|84495933|ref|ZP_00994787.1| hypothetical protein JNB_00400 [Janibacter sp. HTCC2649] gi|84382701|gb|EAP98582.1| hypothetical protein JNB_00400 [Janibacter sp. HTCC2649] Length = 309 Score = 46.3 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 29/155 (18%), Positives = 50/155 (32%), Gaps = 21/155 (13%) Query: 21 SKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAK 80 ++ ++D ++ S V Y + H L+D A Sbjct: 48 TRLAQAEVDLGAIIDYASSFGTVALTRAYADWSVPANAAYK--HQLID---------RAV 96 Query: 81 VAKEFTENCGRKRVKSSMDVELAVDAFE-QSEGLE--HLVIFSGDGCFTTLVAALQRKVK 137 + G K+ D+ L++DA + + H+VI +GD + L +R + Sbjct: 97 DLVQLFATSGT---KNGADIRLSIDAVNDLVDHKDLTHVVIVAGDSDYIALAQRCRRMGR 153 Query: 138 KVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 V + S S L D F D L Sbjct: 154 FVVGIGVTGS----TSRALVAACDEFSDYGDLPGV 184 >gi|329850271|ref|ZP_08265116.1| hypothetical protein ABI_31720 [Asticcacaulis biprosthecum C19] gi|328840586|gb|EGF90157.1| hypothetical protein ABI_31720 [Asticcacaulis biprosthecum C19] Length = 240 Score = 46.3 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 33/184 (17%), Positives = 70/184 (38%), Gaps = 16/184 (8%) Query: 5 REKIALFIDGANLYASSKALGFD----IDYRKLLKAFRSRAI----VIRAYYYTTVVGDP 56 R++ A + DG NLY + A ++ + L +A R+ V+ Y Sbjct: 16 RQRAAFYFDGFNLYHAVDAYKRPYLKWLNLKALARAVAPRSEAIKRVVWCSAYRPQNKSK 75 Query: 57 EQQFSPLHPLLDW---LHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112 ++ L+ + G V A + + + ++ DV LA+ +E Sbjct: 76 LKRHEDYRKALEGQGVICRMGHFVHASDSCNACGHNWQLHIEKQGDVNLALSIAADAEDD 135 Query: 113 -LEHLVIFSGDGCFTTLVAALQRKV--KKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 + + + DG ++ + KK+ +VS P+ ++L +D+A+L Sbjct: 136 LFDVCYLVTADGDHAATARYIRERFPKKKLVLVSPPGRHPNRHIERLAHACVE-IDMAHL 194 Query: 170 KNEI 173 + + Sbjct: 195 EASL 198 >gi|327482222|gb|AEA85532.1| conserved hypothetical protein [Pseudomonas stutzeri DSM 4166] Length = 277 Score = 46.3 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 39/108 (36%), Gaps = 7/108 (6%) Query: 76 QVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQ 133 +V+ + + + K++ D L +DA + + + + S D FT L A ++ Sbjct: 60 KVLLDHSIQPIQQFAYTSGKNATDSSLIIDAMDLLYTRRFDGFCLVSSDSDFTRLAARIR 119 Query: 134 RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 + V + S D F+ L+ + A+ E Sbjct: 120 EEGLTVYGFGEQKTPSPFVS-----ACDKFIYTEILRADAAKASVEPP 162 >gi|16519880|ref|NP_444000.1| hypothetical 23.5 kDa protein [Sinorhizobium fredii NGR234] gi|2496724|sp|P55589|Y4OD_RHISN RecName: Full=Uncharacterized protein y4oD gi|2182554|gb|AAB91797.1| hypothetical 23.5 kDa protein [Sinorhizobium fredii NGR234] Length = 214 Score = 46.3 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 31/75 (41%), Gaps = 4/75 (5%) Query: 89 CGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVL 146 G+ + K +D + D E + + +V+ SGD V Q +V ++ + Sbjct: 22 NGQGQQKG-VDSLIVTDLIELARQRAISEVVLLSGDEDVRVGVQIAQNYGVRVHLLG-IH 79 Query: 147 SDPSMASDQLRRQAD 161 S LR++AD Sbjct: 80 PARGSQSPTLRQEAD 94 >gi|126433513|ref|YP_001069204.1| hypothetical protein Mjls_0904 [Mycobacterium sp. JLS] gi|126233313|gb|ABN96713.1| protein of unknown function DUF88 [Mycobacterium sp. JLS] Length = 311 Score = 46.3 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 28/140 (20%), Positives = 46/140 (32%), Gaps = 20/140 (14%) Query: 28 IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTE 87 +D ++ S ++ Y D + Q+VA+ Sbjct: 58 VDIGAVIDFASSFGTLVLTRAYADWSSDVNANYRG-------------QLVARAVDLVQL 104 Query: 88 NCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVST 144 K+ D+ LAVDA E L H+VI GD + L +R + V + Sbjct: 105 FPAAAYGKNGADIRLAVDAVEDMFRLPDLTHVVIVGGDSDYIALAQRCKRLGRYVVGIGV 164 Query: 145 VLSDPSMASDQLRRQADYFM 164 + +S L D F+ Sbjct: 165 AGA----SSRSLAAACDEFV 180 >gi|299532727|ref|ZP_07046115.1| hypothetical protein CTS44_18078 [Comamonas testosteroni S44] gi|298719362|gb|EFI60331.1| hypothetical protein CTS44_18078 [Comamonas testosteroni S44] Length = 293 Score = 46.3 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 35/169 (20%), Positives = 56/169 (33%), Gaps = 29/169 (17%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 + +IAL ID N A ID ++L + ++ Y + LH Sbjct: 6 QPRIALLIDADN------APAEMID--EILTELSTFGLINIRRAY------GNWTKAGLH 51 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGD 122 L + V + ++F + G+ D+ + VDA E +E + I S D Sbjct: 52 GWQSKL--LEYAV--RPMQQFDYSKGKNAT----DMAMTVDAMELLYTEKPDAFGIVSSD 103 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 FT LV L+ K + F+ LK Sbjct: 104 ADFTPLVMHLRAKGA--AVYGFGAEQ---TPRAFVNACSRFLYFDALKE 147 >gi|146279485|ref|YP_001169643.1| hypothetical protein Rsph17025_3462 [Rhodobacter sphaeroides ATCC 17025] gi|145557726|gb|ABP72338.1| hypothetical protein Rsph17025_3462 [Rhodobacter sphaeroides ATCC 17025] Length = 225 Score = 46.3 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 34/159 (21%), Positives = 53/159 (33%), Gaps = 37/159 (23%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 +A+ IDG NL S K +R + + A ++ + Sbjct: 4 VAVLIDGDNL--SGKH--------------AARIVEVAA---ALGRPTVQRVYVDAQRPC 44 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCF 125 DW GF+++ K++ D+ LA+DA E + + VI S D F Sbjct: 45 DWHAARGFRLM-----------HAGTGKNASDLLLALDAVELALRGDADQFVIASSDRDF 93 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 T L L+ VT V R F+ Sbjct: 94 THLALRLREYGASVTGVGEAK-----TPQSFRAACADFI 127 >gi|127511410|ref|YP_001092607.1| hypothetical protein Shew_0476 [Shewanella loihica PV-4] gi|126636705|gb|ABO22348.1| protein of unknown function DUF88 [Shewanella loihica PV-4] Length = 265 Score = 46.3 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 32/163 (19%), Positives = 54/163 (33%), Gaps = 29/163 (17%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 KIA+FID N A D +L +V Y + L Sbjct: 6 KIAVFIDADN------APARKFD--VILAELAKHGVVSIRKAY------GNWKSPGLKHW 51 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGC 124 D L + + ++F G+ D+ L +DA + ++ ++ + + S D Sbjct: 52 EDIL----HEYAIQPIQQFDLTKGKNAT----DIALVIDAMDILYTKDIDIMCLISSDCD 103 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 FT LV + KKV + + F+ L Sbjct: 104 FTPLVTRVLSDGKKVFGFGERKAPTAFV-----NSCSRFLYLD 141 >gi|325958516|ref|YP_004289982.1| hypothetical protein Metbo_0759 [Methanobacterium sp. AL-21] gi|325329948|gb|ADZ09010.1| protein of unknown function DUF88 [Methanobacterium sp. AL-21] Length = 163 Score = 46.3 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 58/166 (34%), Gaps = 38/166 (22%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIR---AYYYTTVVGDPEQQFSPLH 64 + L +DG N+ L K F ++R A Y VG Sbjct: 26 VGLLVDGPNM---------------LRKEFSLNLDIVRDIIAEYGNMRVGKVLLNQYASD 70 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGD 122 L++ + G+ + V DV +AV+A E ++ + + + D Sbjct: 71 KLIEAIVNQGYTPIV--------------VAGDTDVYMAVEAMELIYNPNIDIIALMTRD 116 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F ++ + K+ ++ ++P ++ L+ AD + L Sbjct: 117 ADFLPIINKAKENGKETLVIG---AEPGFSA-ALQNSADSAIVLKS 158 >gi|99080500|ref|YP_612654.1| hypothetical protein TM1040_0659 [Ruegeria sp. TM1040] gi|99036780|gb|ABF63392.1| protein of unknown function DUF88 [Ruegeria sp. TM1040] Length = 262 Score = 46.3 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 19/98 (19%), Positives = 38/98 (38%), Gaps = 11/98 (11%) Query: 81 VAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKK 138 ++F G+ D+ L +DA + S + V+ S D FT L + ++ + Sbjct: 66 PHQQFANTTGKNAS----DIALVIDAMDILHSGRFDGFVLISSDSDFTRLASRIREQGLD 121 Query: 139 VTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 V + + + R F+ + L E+ +D Sbjct: 122 VYGMGMRKTPAAFV-----RACKRFIYVENLLTEVPKD 154 >gi|186681791|ref|YP_001864987.1| hypothetical protein Npun_R1332 [Nostoc punctiforme PCC 73102] gi|186464243|gb|ACC80044.1| protein of unknown function DUF88 [Nostoc punctiforme PCC 73102] Length = 283 Score = 46.3 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 60/177 (33%), Gaps = 25/177 (14%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 + +F D N+ + K G LL+ +S+ + Y + Sbjct: 37 VGIFADIQNV-SLIKGKGHF-----LLEFAQSKGRIDCKNVYY------NSHYINQVCTK 84 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTT 127 + L G + V + + N R+ + V A + L +++ SGD + Sbjct: 85 NELEILGIKCV--DVPDHSNNSADYRLMAD-----CVKAVAFNPSLTTIILLSGDWDYAG 137 Query: 128 LVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA--DYFMDLAYLKNEIARDPDEDKK 182 L+ L+ KKV I + S +L + D F + L +A + Sbjct: 138 LICILKSLGKKVKI----FAQRGSESPKLIKLVGNDNFHFVDELPQLVANTNKTQPQ 190 >gi|108797873|ref|YP_638070.1| hypothetical protein Mmcs_0898 [Mycobacterium sp. MCS] gi|119866967|ref|YP_936919.1| hypothetical protein Mkms_0915 [Mycobacterium sp. KMS] gi|108768292|gb|ABG07014.1| protein of unknown function DUF88 [Mycobacterium sp. MCS] gi|119693056|gb|ABL90129.1| protein of unknown function DUF88 [Mycobacterium sp. KMS] Length = 311 Score = 46.3 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 28/140 (20%), Positives = 46/140 (32%), Gaps = 20/140 (14%) Query: 28 IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTE 87 +D ++ S ++ Y D + Q+VA+ Sbjct: 58 VDIGAVIDFASSFGTLVLTRAYADWSSDVNANYRG-------------QLVARAVDLVQL 104 Query: 88 NCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVST 144 K+ D+ LAVDA E L H+VI GD + L +R + V + Sbjct: 105 FPAAAYGKNGADIRLAVDAVEDMFRLPDLTHVVIVGGDSDYIALAQRCKRLGRYVVGIGV 164 Query: 145 VLSDPSMASDQLRRQADYFM 164 + +S L D F+ Sbjct: 165 AGA----SSRSLAAACDEFV 180 >gi|289610064|emb|CBI60331.1| unnamed protein product [Sordaria macrospora] Length = 257 Score = 46.3 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 31/180 (17%), Positives = 58/180 (32%), Gaps = 31/180 (17%) Query: 10 LFIDGANLYAS------SKALGFDIDYRKLLKAFR-----SRAIVIRAYYYTTVVGD--- 55 +F+D N++ + A+ F D L + A Y G+ Sbjct: 7 IFVDFDNVFTALWGIDEGLAIRFASDPADWLTRLGTLDTDEPRRWLVARCYMNPRGNVSA 66 Query: 56 --PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112 GF+V+ + K++ D+ + +D + Sbjct: 67 PGERNDRLWFSNFRTNFVRAGFEVIDCPPLTWG-------AKNAADIRMVIDVLDLLGHR 119 Query: 113 --LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170 V SGD FT L+ L+ + ++ TI+S P + A+ + L L+ Sbjct: 120 TRFGEFVFLSGDSDFTPLLHRLRAEDRRTTILS-----PGHLAAAYTSVAERVLGLDTLE 174 >gi|264680306|ref|YP_003280216.1| hypothetical protein CtCNB1_4174 [Comamonas testosteroni CNB-2] gi|262210822|gb|ACY34920.1| hypothetical conserved protein [Comamonas testosteroni CNB-2] Length = 293 Score = 46.3 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 35/169 (20%), Positives = 56/169 (33%), Gaps = 29/169 (17%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 + +IAL ID N A ID ++L + ++ Y + LH Sbjct: 6 QPRIALLIDADN------APAEMID--EILTELSTFGLINIRRAY------GNWTKAGLH 51 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGD 122 L + V + ++F + G+ D+ + VDA E +E + I S D Sbjct: 52 GWQSKL--LEYAV--RPMQQFDYSKGKNAT----DMAMTVDAMELLYTEKPDAFGIVSSD 103 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 FT LV L+ K + F+ LK Sbjct: 104 ADFTPLVMHLRAKGA--AVYGFGAEQ---TPRAFVNACSRFLYFDALKE 147 >gi|146283893|ref|YP_001174046.1| hypothetical protein PST_3576 [Pseudomonas stutzeri A1501] gi|145572098|gb|ABP81204.1| uncharacterized conserved protein [Pseudomonas stutzeri A1501] Length = 243 Score = 46.3 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 39/108 (36%), Gaps = 7/108 (6%) Query: 76 QVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQ 133 +V+ + + + K++ D L +DA + + + + S D FT L A ++ Sbjct: 26 KVLLDHSIQPIQQFAYTSGKNATDSSLIIDAMDLLYTRRFDGFCLVSSDSDFTRLAARIR 85 Query: 134 RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 + V + S D F+ L+ + A+ E Sbjct: 86 EEGLTVYGFGEQKTPSPFVS-----ACDKFIYTEILRADAAKASVEPP 128 >gi|296134764|ref|YP_003642006.1| protein of unknown function DUF88 [Thiomonas intermedia K12] gi|295794886|gb|ADG29676.1| protein of unknown function DUF88 [Thiomonas intermedia K12] Length = 259 Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 32/166 (19%), Positives = 53/166 (31%), Gaps = 29/166 (17%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 +IAL ID N + ID ++L I+ Y + P Sbjct: 6 RIALLIDADN------SPADMID--EVLDELAKEGIINIRRAY----------GNWKSPH 47 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGC 124 L+ + ++F G+ D + +DA + ++ L+ I S D Sbjct: 48 LNAWAALLHDFAIQPIQQFDYTKGKNAT----DAAMIIDAMDLLYTKQLDGFGIVSSDSD 103 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170 FT LV L+ KV + F+ L L+ Sbjct: 104 FTPLVMRLRANGLKVYGFGEQKTPKPFV-----NACSKFLYLENLR 144 >gi|21226782|ref|NP_632704.1| hypothetical protein MM_0680 [Methanosarcina mazei Go1] gi|20905077|gb|AAM30376.1| conserved protein [Methanosarcina mazei Go1] Length = 197 Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 55/162 (33%), Gaps = 32/162 (19%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 R KI L +DG N+ FD++ ++ + + + Sbjct: 23 RRKIGLLVDGPNI----LRKEFDVNLEEIRDVLKDYGNIKIGRVFLNQYASD-------- 70 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGD 122 L++ + +G + + S +DV LAV+ E ++ L I + D Sbjct: 71 KLVEAIENHGLEPII--------------CSSDVDVRLAVEGMELVYNPNIDTLAIVTRD 116 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F L+ K+ + + S L+ ADY + Sbjct: 117 ADFKPLLNKANEHGKE----TIIFGVEPGFSTALKNSADYVI 154 >gi|146340536|ref|YP_001205584.1| hypothetical protein BRADO3579 [Bradyrhizobium sp. ORS278] gi|146193342|emb|CAL77358.1| conserved hypothetical protein [Bradyrhizobium sp. ORS278] Length = 263 Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 30/76 (39%), Gaps = 7/76 (9%) Query: 99 DVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156 D+ L +DA + S + + S D FT L A ++ + V + + Sbjct: 79 DITLVIDAMDLLHSGRFDGFCLVSSDSDFTRLAARIREQGIDV----FGFGEQK-TPESF 133 Query: 157 RRQADYFMDLAYLKNE 172 R+ F+ L+++ Sbjct: 134 RQACRRFIYTENLRSD 149 >gi|119887743|gb|ABM05923.1| NicB [Pseudomonas putida] Length = 312 Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 34/206 (16%), Positives = 62/206 (30%), Gaps = 57/206 (27%) Query: 7 KIALFIDGANLYASSKA---LGF----------------------DIDYRKLLK-----A 36 + ++IDG N Y + I +LL+ Sbjct: 11 RTRIYIDGYNFYYGCLRGTPYKWLDLLPLFEKHILPSILVTDNHGQIRAWRLLESPSIKY 70 Query: 37 FRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYN------GFQVVAKVAKEFTEN-- 88 F ++ I A GD + H L LH G+ V K+ + + Sbjct: 71 FTAKIIESVARA-----GDSVSSQARYHTALRKLHDGRIELIEGYYAVNKMKVKIVDPEN 125 Query: 89 -----------CGRKRVKSSMDVELAVDAF--EQSEGLEHLVIFSGDGCFTTLVAALQRK 135 K + DV LA+ A+ + ++H VI + D + ++ Sbjct: 126 PDKAPRECREIQAWKVEEKQSDVNLALQAYHDSITGQVDHAVIVTNDTDIAPALQMIRAH 185 Query: 136 -VKKVTIVSTVLSDPSMASDQLRRQA 160 ++ +V A+ L + A Sbjct: 186 TDVRIGVVVPTSGQNRSANTDLIKFA 211 >gi|89052539|ref|YP_507990.1| hypothetical protein Jann_0048 [Jannaschia sp. CCS1] gi|88862088|gb|ABD52965.1| protein of unknown function DUF88 [Jannaschia sp. CCS1] Length = 239 Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 14/73 (19%), Positives = 28/73 (38%), Gaps = 7/73 (9%) Query: 99 DVELAVDAF--EQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156 D+ L +DA S + V+ S D FT L + ++ + V + + Sbjct: 77 DIALVIDAMDVLHSGRFDGFVLVSSDSDFTRLASRIREQGLDVYGIGQQK-----TPEAF 131 Query: 157 RRQADYFMDLAYL 169 R+ F+ + + Sbjct: 132 RKACKRFIFIENI 144 >gi|266625430|ref|ZP_06118365.1| conserved hypothetical protein [Clostridium hathewayi DSM 13479] gi|288862663|gb|EFC94961.1| conserved hypothetical protein [Clostridium hathewayi DSM 13479] Length = 306 Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 31/172 (18%), Positives = 59/172 (34%), Gaps = 29/172 (16%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 +K A+ ID N+ S+K + + +L ++ Y + S Sbjct: 1 MNDKKFAVLIDSDNI--SAKYISY------ILDEMTKYGVITYKRIY------GDWTSSQ 46 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 + L N ++F+ G+ D L +DA + ++ ++ I S Sbjct: 47 MGKWKQELLENSIT----PIQQFSNTVGKNAT----DSALIIDAMDLLYTDNVDGFCIVS 98 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 D FT L + L+ K+V + R F +L L ++ Sbjct: 99 SDSDFTKLASRLRESGKEV-----IGMGEEKTPKSFRAACTVFTNLEILLDQ 145 >gi|116754600|ref|YP_843718.1| hypothetical protein Mthe_1300 [Methanosaeta thermophila PT] gi|116666051|gb|ABK15078.1| protein of unknown function DUF88 [Methanosaeta thermophila PT] Length = 162 Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 27/168 (16%), Positives = 55/168 (32%), Gaps = 36/168 (21%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIV----IRAYYYTTVVGDPEQQF 60 R+KI L +DG N+ F +D ++ R + + Y + Sbjct: 20 RKKIGLLVDGPNM----LRKEFQMDLEEIRNILRDYGDIKVGKVFLNQYAS--------- 66 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 L++ + GF+ ++ R V+ VD + ++ + + + Sbjct: 67 ---EKLVEAVENQGFE----PVICTSDVDVRMAVEG-------VDMI-YNPVIDTIALVT 111 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 D ++ K+ + + S LR ADY + L Sbjct: 112 RDADLKPVLMKAMEHGKE----TIIFGAEPGFSVALRNSADYVIVLRN 155 >gi|148255393|ref|YP_001239978.1| hypothetical protein BBta_4005 [Bradyrhizobium sp. BTAi1] gi|146407566|gb|ABQ36072.1| hypothetical protein BBta_4005 [Bradyrhizobium sp. BTAi1] Length = 263 Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 30/76 (39%), Gaps = 7/76 (9%) Query: 99 DVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156 D+ L +DA + S + + S D FT L A ++ + V + + Sbjct: 79 DITLVIDAMDLLHSGRFDGFCLVSSDSDFTRLAARIREQGIDV----FGFGEQK-TPESF 133 Query: 157 RRQADYFMDLAYLKNE 172 R+ F+ L+++ Sbjct: 134 RQACRRFIYTENLRSD 149 >gi|326319000|ref|YP_004236672.1| hypothetical protein Acav_4221 [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375836|gb|ADX48105.1| Domain of unknown function DUF88 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 298 Score = 45.9 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 32/164 (19%), Positives = 52/164 (31%), Gaps = 31/164 (18%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 +IAL ID N A ID ++L + ++ Y S L Sbjct: 14 RIALLIDADN------APAEMID--EILTELSTLGVISIRRAY------GNWTKSALSGW 59 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSM-DVELAVDAFEQ--SEGLEHLVIFSGDG 123 L + + ++F + + D+ + VDA E ++ + I S D Sbjct: 60 QSKLL----EFAVRPIQQF-----DYSKRKNATDMAMTVDAMELLYTDRPDAFGIVSSDA 110 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 FT LV L+ K V + F+ L Sbjct: 111 DFTPLVMHLRAKGAAVYGFGAQQTPRPFV-----NACSRFLYLE 149 >gi|46127481|ref|XP_388294.1| hypothetical protein FG08118.1 [Gibberella zeae PH-1] Length = 206 Score = 45.9 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 29/158 (18%), Positives = 49/158 (31%), Gaps = 40/158 (25%) Query: 8 IALFIDGANLYASSKALG--------FDIDYRKLLKAFRSRAIVI--------RAYYYTT 51 + ++ID +N+ +A+ ++ D L + + +Y Sbjct: 14 VCIYIDDSNVAIRGRAMHDPQGTLTPWNYDIDVLANIIIQQFDLTAIEPFVQKSLNFYGA 73 Query: 52 VVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTE--NCGRKRVKSSMDVELAVDAFEQ 109 + Q LD L G + G K DV LA D EQ Sbjct: 74 DLHRSPQ--------LDHLRGLG-------LVYGCDCPRNGHGHEK-QADVALATDMTEQ 117 Query: 110 SEG-LE-----HLVIFSGDGCFTTLVAALQRKVKKVTI 141 ++ L+ V+ SGD F V + V + Sbjct: 118 AKHALDFGIARDFVLVSGDSDFIPAVRKVLGYGFNVHV 155 >gi|153011951|ref|YP_001373163.1| hypothetical protein Oant_4745 [Ochrobactrum anthropi ATCC 49188] gi|151563839|gb|ABS17334.1| protein of unknown function DUF88 [Ochrobactrum anthropi ATCC 49188] Length = 246 Score = 45.9 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 28/172 (16%), Positives = 55/172 (31%), Gaps = 30/172 (17%) Query: 1 MFDPR-EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59 M +PR ++A+ ID N AS+K ++ + Sbjct: 1 MAEPRSPRLAVLIDADN--ASAK--------------------IVDGLFEEIAKIGEASV 38 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLV 117 + V+A+ A + K++ D+ L +DA + S + Sbjct: 39 RRIYGDFANPRSKAWIDVLARHAIIPQQQFAYTAGKNASDITLVIDAMDLLHSGRFDGFC 98 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 + S D FT L + ++ + V + + R+ F+ L Sbjct: 99 LVSSDSDFTRLASRIREQGIDV----FGFGEQK-TPESFRQACRRFIYTENL 145 >gi|190576877|ref|YP_001966209.1| hypothetical protein pK245.entp41 [Klebsiella pneumoniae] gi|110264461|gb|ABG56824.1| hypothetical protein [Klebsiella pneumoniae] Length = 228 Score = 45.9 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 37/224 (16%), Positives = 72/224 (32%), Gaps = 54/224 (24%) Query: 7 KIALFIDGANLYA---SSKALGFDIDYRKLLKAFRS----RAIVIRAYYYTTVVGDP--- 56 + A FIDG NL+ + + +D LL + + Y+T+ V P Sbjct: 2 RTAFFIDGYNLFYGLLAGTPFKW-LDLPALLTYITKIQNPASETAQVNYFTSPVLPPLAT 60 Query: 57 --EQQFSPLHPLLDWLHYNGFQVVAKVAK-------EFTEN-CGRKRVKSSM-------- 98 ++ + L G V + + + + K + Sbjct: 61 RGKESAEAQDVYIRALKAKGVTVHLGRHRLNRGSAPRYLDGIPASRSDKVDVWDLEEKET 120 Query: 99 DVELAVDAFEQSE---------GLEHLVIFSGDGCFTTLVAALQRKVKKVTI-------V 142 DV +A+ + + +V+ S D T + A++ ++T+ Sbjct: 121 DVNIAISMYRLLSKQQNLEADARIAQIVLVSADTDMTPALKAIKEDFPEITVGIILPHRE 180 Query: 143 STVLSDPSMA---SDQLRRQADYFMDLAYLKNEI--ARDPDEDK 181 P SD +RRQ + + L++ R P + K Sbjct: 181 GIERGVPGSLKNHSDWIRRQ----VKIDELQSHQFPERVPTKKK 220 >gi|332703643|ref|ZP_08423731.1| protein of unknown function DUF88 [Desulfovibrio africanus str. Walvis Bay] gi|332553792|gb|EGJ50836.1| protein of unknown function DUF88 [Desulfovibrio africanus str. Walvis Bay] Length = 251 Score = 45.9 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 37/176 (21%), Positives = 57/176 (32%), Gaps = 29/176 (16%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M +++A+ ID N AS+ ID LLK Y + Sbjct: 1 MVANADRLAVLIDADNATASA------ID--GLLKEVSKYGTPTVKRAY------GDWTT 46 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118 S L D LH K A + + + K+S D L +DA + S I Sbjct: 47 SQLKSWKDVLH--------KYAIQPEQQFSYTKGKNSTDSALIIDAMDLLYSRNFTGFCI 98 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 S D +T L +++ V + + D F+ L K + Sbjct: 99 VSSDSDYTRLATRIRQDGVFVYGFGERKTPEPFVA-----ACDKFVFLEIFKESVE 149 >gi|289450778|ref|YP_003475518.1| hypothetical protein HMPREF0868_1242 [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289185325|gb|ADC91750.1| conserved hypothetical protein [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 257 Score = 45.9 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 32/85 (37%), Gaps = 7/85 (8%) Query: 87 ENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVST 144 + G K+S D L +DA + +E ++ + S D FT L L+ K V Sbjct: 66 QQFGYTSGKNSTDSALIIDAMDILYAEKVDGFCLVSSDSDFTRLATRLREAGKVVYGFGE 125 Query: 145 VLSDPSMASDQLRRQADYFMDLAYL 169 + + D F+ L + Sbjct: 126 QKTPNPFIA-----ACDRFVFLEII 145 >gi|190576025|ref|YP_001973870.1| hypothetical protein Smlt4196 [Stenotrophomonas maltophilia K279a] gi|190013947|emb|CAQ47587.1| conserved hypothetical protein [Stenotrophomonas maltophilia K279a] Length = 259 Score = 45.9 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 35/183 (19%), Positives = 58/183 (31%), Gaps = 29/183 (15%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M +P ++IAL ID N A ID ++L + Y Sbjct: 1 MSEPEKRIALLIDADN------APASKID--EVLAEVARYGVANVRRAY----------G 42 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118 + P L + + ++F + G+ + + +DA + + L+ I Sbjct: 43 NWKSPRLKGWEAVLHEYAIRPIQQFAYSKGKNASA----MAMVIDAMDLLYARNLDGFAI 98 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178 S D FT +V L KV + F L L A PD Sbjct: 99 VSSDADFTPMVMRLLTDGVKVYGFGEKKTPEPFV-----NACSKFTYLEALGQTHASVPD 153 Query: 179 EDK 181 ++ Sbjct: 154 TEQ 156 >gi|322704309|gb|EFY95906.1| hypothetical protein MAA_08714 [Metarhizium anisopliae ARSEF 23] Length = 251 Score = 45.9 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 16/81 (19%), Positives = 31/81 (38%), Gaps = 7/81 (8%) Query: 95 KSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMA 152 K+S D + +DA + S + + S D FT L + ++ V + ++ Sbjct: 74 KNSTDAAMVIDAMDLLYSNRFDGFCLVSSDSDFTRLASRIRESGLLVYGFGERKAPKALV 133 Query: 153 SDQLRRQADYFMDLAYLKNEI 173 S D F+ + L + Sbjct: 134 S-----ACDKFIYIENLSQNV 149 >gi|290957576|ref|YP_003488758.1| hypothetical protein SCAB_30991 [Streptomyces scabiei 87.22] gi|260647102|emb|CBG70201.1| conserved hypothetical protein [Streptomyces scabiei 87.22] Length = 301 Score = 45.5 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 34/186 (18%), Positives = 62/186 (33%), Gaps = 31/186 (16%) Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53 A+F+D LYA+ L FD+D L+ A +A ++R Y+Y Sbjct: 37 AIFVDAGYLYAAVGRLAAGTEDRRSFDLDAEGLIDALIDKARTIFADSRLLRVYWY---D 93 Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112 G + + + L K N + +D + D + Sbjct: 94 GARRRIHTAEQQSIAELP---------DVKVRLGNLNANNQQKGVDSLIRTDLESLARHR 144 Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169 + + GD + V A Q +V + + ++ L + D DL + Sbjct: 145 AISDAALIGGDEDLVSAVEAAQGYGARVHLWGIEAPEGRNQAEPLLWEVDSQRTFDLDFF 204 Query: 170 KNEIAR 175 K ++R Sbjct: 205 KPYVSR 210 >gi|225023600|ref|ZP_03712792.1| hypothetical protein EIKCOROL_00460 [Eikenella corrodens ATCC 23834] gi|224943482|gb|EEG24691.1| hypothetical protein EIKCOROL_00460 [Eikenella corrodens ATCC 23834] Length = 392 Score = 45.5 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 60/179 (33%), Gaps = 30/179 (16%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 D + ++A+ ID N + A DI +LL+ I Y GD S Sbjct: 5 DQQARLAVLIDADN----APA---DI-IDRLLEEIAKYGIASVKRIY----GDWSHGLSK 52 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 L ++ ++F G+ D+ L +DA + S + I S Sbjct: 53 WKAAL-----LPHAII--PVQQFAYTKGKNAT----DMALVIDAMDLLYSGNFDGFCIVS 101 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 D FT L + L+ +T+ A R+ D F+ E R E Sbjct: 102 SDSDFTRLASRLRESG--LTVYGFGEKKTPTA---FRKACDKFIYTEIFLPEKQRAHKE 155 >gi|294628827|ref|ZP_06707387.1| conserved hypothetical protein [Streptomyces sp. e14] gi|292832160|gb|EFF90509.1| conserved hypothetical protein [Streptomyces sp. e14] Length = 408 Score = 45.5 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 59/147 (40%), Gaps = 18/147 (12%) Query: 25 GFDIDYRKLLKAFRSRAI------VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVV 78 +D+ L++ R +A ++R Y++ G P++ P H L + +V Sbjct: 29 RITVDHSALVQQLREQAESDTERPLLRIYWF---DGAPDRVPQPEHRRLRVMP----RVT 81 Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136 ++ T + GR K +D + + E + +V+ +GDG + A + Sbjct: 82 VRLG-ALTRSDGRWAQKG-VDAAMHAELTELARNRACSDVVLVTGDGDLLPGMMAAKEHG 139 Query: 137 KKVTIVSTVLSDPS-MASDQLRRQADY 162 V + + +D S+ L +AD Sbjct: 140 VAVHLWAVQAADGDYNQSEDLVAEADE 166 >gi|289552459|ref|ZP_06441669.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605] gi|289437091|gb|EFD19584.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605] Length = 209 Score = 45.5 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 30/121 (24%), Positives = 44/121 (36%), Gaps = 26/121 (21%) Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG-----LEHLVI 118 P +D L GF V AK K D ++ D + L LV+ Sbjct: 78 RPWVDALRNVGFAVFAKP-------------KVDEDSDVDRDMLAHIDERYREGLAALVV 124 Query: 119 FSGDGC-FTTLVAALQRKVKKVTIVSTVLSDP-SMASDQLRRQADYFMDLAYLKNEIARD 176 S DG F + A+ R V ++ ++ASD L F+DL + R+ Sbjct: 125 ASADGQAFRQPLEAVARSGTPVQVLGFREHASWALASDTL-----EFVDLEDIAGVF-RE 178 Query: 177 P 177 P Sbjct: 179 P 179 >gi|27378275|ref|NP_769804.1| hypothetical protein blr3164 [Bradyrhizobium japonicum USDA 110] gi|27351422|dbj|BAC48429.1| blr3164 [Bradyrhizobium japonicum USDA 110] Length = 265 Score = 45.5 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 18/95 (18%), Positives = 36/95 (37%), Gaps = 7/95 (7%) Query: 77 VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQR 134 +++K A + K++ D+ L +DA + S + + S D FT L A ++ Sbjct: 57 ILSKHAIIPQQQFAYTTGKNASDITLVIDAMDLLHSGRFDGFCLVSSDSDFTRLAARIRE 116 Query: 135 KVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 + V + + R+ F+ L Sbjct: 117 QGVDV----FGFGEQK-TPESFRQACRRFVYTENL 146 >gi|326330720|ref|ZP_08197024.1| hypothetical protein NBCG_02155 [Nocardioidaceae bacterium Broad-1] gi|325951561|gb|EGD43597.1| hypothetical protein NBCG_02155 [Nocardioidaceae bacterium Broad-1] Length = 252 Score = 45.5 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 31/135 (22%), Positives = 47/135 (34%), Gaps = 24/135 (17%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 +IAL ID N A+ ID +L V Y L Sbjct: 6 RIALLIDADNAPAA------KID--AILNDLAEYGEVTIRRAYGNWTKPE------LKGW 51 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGL--EHLVIFSGDGC 124 ++ L + ++F K++ D+ LA+DA E + + S D Sbjct: 52 IEEL----HDAAIRPMQQFD----LTAHKNASDMALAIDAVELLHAAIPDAFALVSSDSD 103 Query: 125 FTTLVAALQRKVKKV 139 FT LV L+ K + V Sbjct: 104 FTPLVHYLREKGRAV 118 >gi|118463148|ref|YP_883698.1| hypothetical protein MAV_4568 [Mycobacterium avium 104] gi|118164435|gb|ABK65332.1| conserved hypothetical protein [Mycobacterium avium 104] Length = 284 Score = 45.5 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 31/165 (18%), Positives = 53/165 (32%), Gaps = 22/165 (13%) Query: 19 ASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVV 78 + + +D +L S ++ Y + + Q+V Sbjct: 35 FTERLEQATVDVGAILDFASSFGTLVLTRAYADWSAEINAGYRG-------------QLV 81 Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRK 135 A+ K+ D+ LAVDA E L H+VI +GD + L +R Sbjct: 82 ARAVDLVQLFPAAAYGKNGADIRLAVDAVEDMFRLPDLTHVVIVAGDSDYIPLAQRCKRL 141 Query: 136 VKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE--IARDPD 178 + V + + +S L D F+ L + R P Sbjct: 142 GRYVVGIGVAGA----SSRALAAACDEFVIYDALPGVTALDRTPA 182 >gi|330504910|ref|YP_004381779.1| hypothetical protein MDS_3996 [Pseudomonas mendocina NK-01] gi|328919196|gb|AEB60027.1| hypothetical protein MDS_3996 [Pseudomonas mendocina NK-01] Length = 274 Score = 45.5 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 17/99 (17%), Positives = 39/99 (39%), Gaps = 7/99 (7%) Query: 76 QVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQ 133 +V+ + + + + K++ D L +DA + + + + S D FT L A L+ Sbjct: 60 KVLLDHSIQPIQQFAYTKGKNATDSSLIIDAMDLLYTRRFDGFCLVSSDSDFTRLAARLR 119 Query: 134 RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 + +V + + D F+ L+++ Sbjct: 120 EEGLEVIGFGEQKTPQPFV-----KACDTFIYTELLRDD 153 >gi|319948099|ref|ZP_08022264.1| hypothetical protein ES5_02124 [Dietzia cinnamea P4] gi|319438233|gb|EFV93188.1| hypothetical protein ES5_02124 [Dietzia cinnamea P4] Length = 177 Score = 45.5 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 7/62 (11%) Query: 104 VDAFE---QSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160 +D ++ + +V+ SGDG FT VA L KVT+V+ S + +L+ A Sbjct: 105 LDVLNYENIADRFDEVVLVSGDGIFTETVATLGGHGVKVTVVAHRTSL----AKRLQMAA 160 Query: 161 DY 162 Sbjct: 161 SQ 162 >gi|291526127|emb|CBK91714.1| Protein of unknown function DUF88 [Eubacterium rectale DSM 17629] Length = 189 Score = 45.5 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 67/164 (40%), Gaps = 27/164 (16%) Query: 5 REKI--ALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 R+K+ ALFIDG N+ +S KA K + ++ Y + + +S Sbjct: 50 RKKVNAALFIDGENI-SSKKAEQIQ-------KIANKQGVLGTEKVYGLQKDECTKSWSD 101 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122 LD ++ K+ +N ++K ++ E+ + ++ ++ + I + D Sbjct: 102 KAKKLDIKD---IRLCGNPEKDKVDN----KIKKDVNQEI-----KNNKSVDVVCIATSD 149 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 +T V L+R+ KKV + + +LR F ++ Sbjct: 150 KGYTDTVKELRRQGKKVVGIGEKKAP-----KELRDACSEFFEI 188 >gi|193212130|ref|YP_001998083.1| hypothetical protein Cpar_0461 [Chlorobaculum parvum NCIB 8327] gi|193085607|gb|ACF10883.1| protein of unknown function DUF88 [Chlorobaculum parvum NCIB 8327] Length = 450 Score = 45.5 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 32/141 (22%), Positives = 52/141 (36%), Gaps = 24/141 (17%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M RE IA+ ID N + ID+ +L +V Y + Sbjct: 1 MEHSRETIAMLIDADN------SPSDKIDF--ILSEMAKYGVVNIRRAY------GNWKS 46 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118 L D LH + + + ++F G+ D+ + +DA + S+ L+ I Sbjct: 47 HSLKGWEDKLHD--YAI--RPIQQFDYTKGKNAT----DMAMTIDAMDLLYSKKLDAFCI 98 Query: 119 FSGDGCFTTLVAALQRKVKKV 139 S D FT LV + + V Sbjct: 99 VSSDSDFTPLVMRILSEGLNV 119 >gi|73667756|ref|YP_303771.1| hypothetical protein Mbar_A0207 [Methanosarcina barkeri str. Fusaro] gi|72394918|gb|AAZ69191.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro] Length = 194 Score = 45.5 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 55/162 (33%), Gaps = 32/162 (19%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 R KI L +DG N+ FD++ ++ + + + Sbjct: 23 RRKIGLLVDGPNI----LRKEFDVNLEEIRDVLKDYGNIKIGRVFLNQYASD-------- 70 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGD 122 L++ + +G + + S +DV LAV+ E ++ L I + D Sbjct: 71 KLVEAIENHGLEPII--------------CSSDVDVRLAVEGMELVYNPNIDTLAIVTRD 116 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F L+ K+ + + S L+ ADY + Sbjct: 117 ADFKPLLNKANEHGKE----TIIFGVEPGFSTALKNSADYVI 154 >gi|330508315|ref|YP_004384743.1| hypothetical protein MCON_2481 [Methanosaeta concilii GP-6] gi|328929123|gb|AEB68925.1| conserved hypothetical protein TIGR00288 [Methanosaeta concilii GP-6] Length = 161 Score = 45.5 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 26/168 (15%), Positives = 55/168 (32%), Gaps = 36/168 (21%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIV----IRAYYYTTVVGDPEQQF 60 R++I L +DG N+ F +D ++ + + + Y + Sbjct: 20 RKRIGLLVDGPNM----LRKEFQMDLEEIRDILKDYGDIKMGKVFLNQYAS--------- 66 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 L++ + GF+ ++ R V+ VD + ++ L + + Sbjct: 67 ---EKLVEAVENQGFE----PVICTSDVDVRMAVEG-------VDMI-YNPVIDTLALVT 111 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 D ++ K+ + + S LR ADY + L Sbjct: 112 RDADLKPVLMKAMEHGKE----TIIFGAEPGFSVALRNSADYVIVLRD 155 >gi|118616825|ref|YP_905157.1| hypothetical protein MUL_1097 [Mycobacterium ulcerans Agy99] gi|118568935|gb|ABL03686.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99] Length = 245 Score = 45.5 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 29/120 (24%), Positives = 41/120 (34%), Gaps = 24/120 (20%) Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG-----LEHLVI 118 P +D L GF V AK + + R D E + L LV+ Sbjct: 114 RPWVDALRNVGFAVFAKPKIDEDSDVDR-------------DMLEHIDQRYREGLAALVV 160 Query: 119 FSGDGC-FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 S DG F + + R V ++ AS L A F+DL + R+P Sbjct: 161 ASADGQAFRQPLEKISRAGTPVQVLGF----REHASWALASDALEFVDLEDIAGVF-REP 215 >gi|313125619|ref|YP_004035889.1| hypothetical protein Hbor_08480 [Halogeometricum borinquense DSM 11551] gi|312291984|gb|ADQ66444.1| uncharacterized conserved protein [Halogeometricum borinquense DSM 11551] Length = 177 Score = 45.1 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 49/156 (31%), Gaps = 31/156 (19%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 ++ALF+DG N+ FD+D + +A Y L Sbjct: 31 RVALFVDGPNV----LRDEFDVDLDDVREAAAEIGRPTATRLYL--------DEHATPGL 78 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGC 124 + GF+VV +DV LAVD + + + + + S D Sbjct: 79 IQAAEARGFEVVI--------------TSGDVDVRLAVDITQFAVEGRADVIAVASRDTD 124 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160 F + + ++ SD LR A Sbjct: 125 FKPAIETANAYGLRTFAIAPGEFGR---SDALRNAA 157 >gi|289580394|ref|YP_003478860.1| hypothetical protein Nmag_0713 [Natrialba magadii ATCC 43099] gi|289529947|gb|ADD04298.1| protein of unknown function DUF88 [Natrialba magadii ATCC 43099] Length = 154 Score = 45.1 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 5/73 (6%) Query: 96 SSMDVELAVDA--FEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMAS 153 +DV+LAVDA + ++ L I S D F ++ + + ++ S Sbjct: 83 GDVDVKLAVDATALSTDQTIDTLAIASRDTDFKPVLEHAAAQG--IETIAIAPGSHGR-S 139 Query: 154 DQLRRQADYFMDL 166 D L+ AD + L Sbjct: 140 DALQNAADEAITL 152 >gi|154496234|ref|ZP_02034930.1| hypothetical protein BACCAP_00519 [Bacteroides capillosus ATCC 29799] gi|150274317|gb|EDN01394.1| hypothetical protein BACCAP_00519 [Bacteroides capillosus ATCC 29799] Length = 288 Score = 45.1 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 16/83 (19%), Positives = 29/83 (34%), Gaps = 7/83 (8%) Query: 99 DVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156 D + +DA + S + V+ S D FT L L+ KV + + Sbjct: 77 DSAMIIDAMDLLYSGRCDGFVLVSSDSDFTRLATRLREAGMKVYGMGEKKTPLPF----- 131 Query: 157 RRQADYFMDLAYLKNEIARDPDE 179 D F+ + ++ + E Sbjct: 132 IVACDKFIYIEVIRAAGEKARQE 154 >gi|257094155|ref|YP_003167796.1| hypothetical protein CAP2UW1_2580 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046679|gb|ACV35867.1| conserved hypothetical protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 311 Score = 45.1 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 50/164 (30%), Gaps = 29/164 (17%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 +P +++A+ ID N + A+ LL+ A S Sbjct: 53 EPTKRLAVLIDADN---AQPAV-----IEALLEEIARFGE---ATVRRIYGDFTSPTSSS 101 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 L+ + K ++F G+ D + +DA + + + + + Sbjct: 102 WKKFLN-------KHSIKPIQQFAYTTGKNAT----DSTMIIDAMDLLYTRRFDGFCLVT 150 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 D FT L L+ + +V + R F+ Sbjct: 151 SDSDFTGLAVRLREEGLQVFGFGEQKTPEPF-----RNACHKFI 189 >gi|150008736|ref|YP_001303479.1| hypothetical protein BDI_2126 [Parabacteroides distasonis ATCC 8503] gi|149937160|gb|ABR43857.1| conserved hypothetical protein [Parabacteroides distasonis ATCC 8503] Length = 240 Score = 45.1 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 29/176 (16%), Positives = 60/176 (34%), Gaps = 29/176 (16%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M +K+A+ ID N+ + + + +L+ I+ Y + Sbjct: 1 MNSKEQKLAVLIDADNVPYA--------NIKGMLEEIAKYGILTIKRIYGDWTKPTVAGW 52 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118 + LLD+ ++++ G+ D + +DA + ++ ++ I Sbjct: 53 KSI--LLDY--------AITPIQQYSYTTGKNAT----DSAMIIDAMDILHTDKVDGFCI 98 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 S D FT L L+ K V + + D F+ + L +I Sbjct: 99 VSSDSDFTRLAVRLRESGKFVLGMGEKKTPNPFIV-----SCDKFVYIEILGGDIK 149 >gi|319788348|ref|YP_004147823.1| hypothetical protein Psesu_2765 [Pseudoxanthomonas suwonensis 11-1] gi|317466860|gb|ADV28592.1| hypothetical protein Psesu_2765 [Pseudoxanthomonas suwonensis 11-1] Length = 250 Score = 45.1 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 32/171 (18%), Positives = 52/171 (30%), Gaps = 29/171 (16%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M +P ++IAL ID N A ID +L + A Sbjct: 1 MAEPEKRIALLIDADN------APASKIDL--VLAEVARHGV---ANVRRAYGNWKSPNL 49 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118 +L + + ++F + G+ D+ + +DA + + L+ I Sbjct: 50 KGWEAVL-------HEYAIRPIQQFAYSSGKNAS----DMAMVIDAMDLLYARNLDGFAI 98 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 S D FT LV L KV + F + L Sbjct: 99 VSSDADFTPLVMRLLTDGMKVYGFGEKKTPSPFV-----NACSKFTYVEAL 144 >gi|302865596|ref|YP_003834233.1| hypothetical protein Micau_1095 [Micromonospora aurantiaca ATCC 27029] gi|315502144|ref|YP_004081031.1| hypothetical protein ML5_1342 [Micromonospora sp. L5] gi|302568455|gb|ADL44657.1| hypothetical protein Micau_1095 [Micromonospora aurantiaca ATCC 27029] gi|315408763|gb|ADU06880.1| hypothetical protein ML5_1342 [Micromonospora sp. L5] Length = 485 Score = 45.1 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 31/76 (40%), Gaps = 2/76 (2%) Query: 69 WLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG-LEHLVIFSGDGCFTT 127 + ++G + + + + +K D+ L V A + V+ +GD F Sbjct: 54 AVRFDG-SITTAMTEHLIDAEVVVSLKEQADIHLTVLAMDYLHQGCGQFVLVTGDQDFIP 112 Query: 128 LVAALQRKVKKVTIVS 143 L+ L R +VT+V Sbjct: 113 LIRRLLRDGCRVTVVY 128 >gi|52425038|ref|YP_088175.1| hypothetical protein MS0983 [Mannheimia succiniciproducens MBEL55E] gi|52307090|gb|AAU37590.1| unknown [Mannheimia succiniciproducens MBEL55E] Length = 274 Score = 45.1 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 56/166 (33%), Gaps = 26/166 (15%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 +A+ ID N AS++ + + +L+ Y VGD + + ++ Sbjct: 18 LAVLIDADN--ASAQTI------KAILEETTKFGEATVKRIYGNFVGDSGKWKAVINEY- 68 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTT 127 K ++F G+ M ++ A+D + + I S D FT Sbjct: 69 ----------AIKPMQQFAYTKGKNATDGFMIID-AMDLL-YTNRFDGFCIVSSDSDFTA 116 Query: 128 LVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 L L+ + VT+ + F+ + L E+ Sbjct: 117 LAIRLKEQG--VTVYGFGKKQ---TPEAFLNACSQFIYVENLLPEL 157 >gi|20092653|ref|NP_618728.1| hypothetical protein MA3857 [Methanosarcina acetivorans C2A] gi|19917935|gb|AAM07208.1| conserved hypothetical protein [Methanosarcina acetivorans C2A] Length = 195 Score = 45.1 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 29/165 (17%), Positives = 56/165 (33%), Gaps = 32/165 (19%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 R KI L +DG N+ FD++ ++ + + + Sbjct: 25 RRKIGLLVDGPNI----LRKEFDVNLEEIRDVLKDYGNIKIGRVFLNQYASD-------- 72 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGD 122 L++ + +G + + S +DV LAV+ E ++ L I + D Sbjct: 73 KLVEAIENHGLEPII--------------CSSDVDVRLAVEGMELVYNPNIDTLAIVTRD 118 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F L+ K+ + + S L+ ADY + + Sbjct: 119 ADFKPLLNKANEHGKE----TIIFGVEPGFSTALKNSADYVILMD 159 >gi|238924719|ref|YP_002938235.1| hypothetical protein EUBREC_2370 [Eubacterium rectale ATCC 33656] gi|238876394|gb|ACR76101.1| Hypothetical protein EUBREC_2370 [Eubacterium rectale ATCC 33656] Length = 191 Score = 45.1 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 67/164 (40%), Gaps = 27/164 (16%) Query: 5 REKI--ALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 R+K+ ALFIDG N+ +S KA K + ++ Y + + +S Sbjct: 52 RKKVNAALFIDGENI-SSKKAEQIQ-------KIANKQGVLGTEKVYGLQKDECTKSWSD 103 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122 LD ++ K+ +N ++K ++ E+ + ++ ++ + I + D Sbjct: 104 KAKKLDIKD---IRLCGNPEKDKVDN----KIKKDVNQEI-----KNNKSVDVVCIATSD 151 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 +T V L+R+ KKV + + +LR F ++ Sbjct: 152 KGYTDTVKELRRQGKKVVGIGEKKAP-----KELRDACSEFFEI 190 >gi|120436105|ref|YP_861791.1| hypothetical protein GFO_1754 [Gramella forsetii KT0803] gi|117578255|emb|CAL66724.1| protein containing DUF88 [Gramella forsetii KT0803] Length = 245 Score = 45.1 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 38/97 (39%), Gaps = 7/97 (7%) Query: 77 VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQR 134 V+ + A + G + K++ D + +DA + S ++ + S D FT L L+ Sbjct: 52 VLLENAIHPIQQYGYTQGKNATDSAMIIDAMDILYSNKVDGFCLVSSDSDFTRLATRLRE 111 Query: 135 KVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 KV + D D F+ + LKN Sbjct: 112 ASMKVIGIGEKK-----TPDPFIVACDKFIYIEILKN 143 >gi|302337118|ref|YP_003802324.1| protein of unknown function DUF88 [Spirochaeta smaragdinae DSM 11293] gi|301634303|gb|ADK79730.1| protein of unknown function DUF88 [Spirochaeta smaragdinae DSM 11293] Length = 250 Score = 45.1 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 27/174 (15%), Positives = 56/174 (32%), Gaps = 29/174 (16%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 ++K+A+ ID N + ++ ++ Y Sbjct: 8 QSQQKLAVLIDADN---TQGSI--------------VEGLLAEVAKYGIASVKRIYGDWT 50 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 L W +V+ + + + G K++ D + +DA + +E + I S Sbjct: 51 SPNLRSW-----KEVLLEHSIIPIQQFGYTSGKNATDSAMIIDAMDLLYTERFDGFCIVS 105 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 D FT L A ++ + V + + S D F+ L+ + Sbjct: 106 SDSDFTRLAARIREEGLTVYGFGEKKTPRAFVS-----ACDKFIYTEILREDAE 154 >gi|238917756|ref|YP_002931273.1| hypothetical protein EUBELI_01837 [Eubacterium eligens ATCC 27750] gi|238873116|gb|ACR72826.1| Hypothetical protein EUBELI_01837 [Eubacterium eligens ATCC 27750] Length = 318 Score = 45.1 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 31/172 (18%), Positives = 56/172 (32%), Gaps = 29/172 (16%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 ++ A+ ID N+ SSK + +L ++ Y + Sbjct: 1 MDDKRYAVLIDSDNI--SSKYI------SNILDEMTKYGVITYKRIY------GDWTSPQ 46 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 L N ++F G+ D L +DA + ++ ++ I S Sbjct: 47 AGKWKKELMENSIT----PIQQFRNTVGKNAT----DSTLIIDAMDILYTKNVDGFCIVS 98 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 DG FT L + L+ +V + R F DL L+++ Sbjct: 99 SDGDFTRLASRLRESGMEVIGMGENK-----TPRSFRAACSVFTDLELLQDQ 145 >gi|315925521|ref|ZP_07921731.1| protein of hypothetical function DUF88 [Pseudoramibacter alactolyticus ATCC 23263] gi|315621062|gb|EFV01033.1| protein of hypothetical function DUF88 [Pseudoramibacter alactolyticus ATCC 23263] Length = 320 Score = 45.1 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 21/102 (20%), Positives = 36/102 (35%), Gaps = 11/102 (10%) Query: 81 VAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKK 138 ++F G+ D L +DA + ++ I S D FT L + L+ Sbjct: 61 PIQQFANVSGKNAT----DSALIIDAMDILYGGMVDGFCIVSSDSDFTRLASRLRESGMM 116 Query: 139 VTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 V + D R F+ L + + +D D+D Sbjct: 117 VIGMGEDK-----TPDSFRNACTKFISLENILDSYEQDIDQD 153 >gi|87200042|ref|YP_497299.1| hypothetical protein Saro_2026 [Novosphingobium aromaticivorans DSM 12444] gi|87135723|gb|ABD26465.1| hypothetical protein Saro_2026 [Novosphingobium aromaticivorans DSM 12444] Length = 270 Score = 45.1 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 20/97 (20%), Positives = 37/97 (38%), Gaps = 7/97 (7%) Query: 77 VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQR 134 V+A+ A + +N K++ D+ L +DA + S + + S D FT L A ++ Sbjct: 57 VLARHAIKAQQNFAYTSGKNASDIALVIDAMDLLHSGRFDGFCLVSSDSDFTGLAARIRE 116 Query: 135 KVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 + V + R+ F+ L Sbjct: 117 QGLDVYGFGEKK-----TPESFRQACKRFIYTENLLE 148 >gi|145226198|ref|YP_001136848.1| hypothetical protein Mflv_5599 [Mycobacterium gilvum PYR-GCK] gi|145218659|gb|ABP48060.1| hypothetical protein Mflv_5599 [Mycobacterium gilvum PYR-GCK] Length = 243 Score = 45.1 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 42/210 (20%), Positives = 65/210 (30%), Gaps = 65/210 (30%) Query: 7 KIALFIDGANLYASSKAL------GFD-IDYRKLLKAFRS------RAIVIRAYYYTTVV 53 ++ ++IDG NLY + L G+ +D R L + A + R Y T V+ Sbjct: 2 RVGVYIDGFNLYYGGRGLCGKGTPGWRWLDVRALATRLVTAHSVWTGATIERVVYCTAVI 61 Query: 54 --GDPEQQFSPLHPLLDWLHY--------NGFQV--VAKVAKEFTENCGR---------- 91 D L L G V VA+ + GR Sbjct: 62 SGADNPVGNREQDAYLRALQRSHTADRVELGNYVHRVARAPLATPDRNGRPLLAHPGGPL 121 Query: 92 --------------------KRVKSSMDVELA----VDAFEQSEGLEHLVIFSGDGCFTT 127 +R + DV +A +D EQ ++ V+ S D Sbjct: 122 MIKDGTGQDDPAAVFMVSTARREEKGSDVNVAAHLLLDILEQ--RIDAAVMISNDSDLKF 179 Query: 128 LVAALQRKVKKVTIVSTVLSDPSMASDQLR 157 V + + V TV S + +LR Sbjct: 180 PVQTARDR----VPVGTVNPSRSHTAGKLR 205 >gi|302692524|ref|XP_003035941.1| hypothetical protein SCHCODRAFT_105543 [Schizophyllum commune H4-8] gi|300109637|gb|EFJ01039.1| hypothetical protein SCHCODRAFT_105543 [Schizophyllum commune H4-8] Length = 598 Score = 45.1 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 23/67 (34%), Gaps = 6/67 (8%) Query: 102 LAVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRR 158 L D + +V+ SGD F + L+++ V +V P L Sbjct: 131 LVADMLVFALREPAPSTVVLVSGDRDFAYTASILRQRGINVVLVCHARPGPH---RSLAA 187 Query: 159 QADYFMD 165 Q +D Sbjct: 188 QVSECVD 194 >gi|295109365|emb|CBL23318.1| Uncharacterized conserved protein [Ruminococcus obeum A2-162] Length = 255 Score = 45.1 bits (106), Expect = 0.005, Method: Composition-based stats. Identities = 27/164 (16%), Positives = 52/164 (31%), Gaps = 29/164 (17%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 IA+ ID N + + +++ + ++ Y + L Sbjct: 7 IAMLIDADN---TQLS-----KLESVIQEISTNGRIVVKRAY------GNWRKGSLKNWE 52 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCF 125 + L ++ K ++F G+ D+ L +D + + VI + D + Sbjct: 53 NELK----RLAIKAEQQFDYVAGKNAT----DMALVIDTLDLLHSGIYDAFVIVASDSDY 104 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 T L L+ V V + R D F+ L L Sbjct: 105 TPLAIKLRESGVFVMGVGEKKTPEPF-----RNACDEFVYLENL 143 >gi|259419136|ref|ZP_05743053.1| conserved hypothetical protein [Silicibacter sp. TrichCH4B] gi|259345358|gb|EEW57212.1| conserved hypothetical protein [Silicibacter sp. TrichCH4B] Length = 258 Score = 45.1 bits (106), Expect = 0.005, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 37/95 (38%), Gaps = 11/95 (11%) Query: 81 VAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKK 138 ++F G+ D+ L +DA + S + V+ S D FT L + ++ + Sbjct: 66 PHQQFANTTGKNAS----DIALVIDAMDILHSGRFDGFVLISSDSDFTRLASRIREQGLD 121 Query: 139 VTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 V + + + R F+ + L NE+ Sbjct: 122 VYGMGMRKTPAAFV-----RACKRFIYVENLLNEV 151 >gi|183980478|ref|YP_001848769.1| hypothetical protein MMAR_0447 [Mycobacterium marinum M] gi|183173804|gb|ACC38914.1| conserved hypothetical protein [Mycobacterium marinum M] Length = 245 Score = 44.7 bits (105), Expect = 0.005, Method: Composition-based stats. Identities = 29/121 (23%), Positives = 43/121 (35%), Gaps = 26/121 (21%) Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG-----LEHLVI 118 P +D L GF V AK + + R D E + L LV+ Sbjct: 114 RPWVDALRNVGFAVFAKPKIDEDSDVDR-------------DMLEHIDQRYREGLAALVV 160 Query: 119 FSGDGC-FTTLVAALQRKVKKVTIVSTVLSDP-SMASDQLRRQADYFMDLAYLKNEIARD 176 S DG F + + R V ++ ++ASD L F+DL + R+ Sbjct: 161 ASADGQAFRQPLEKISRAGTPVQVLGFREHASWALASDTL-----EFVDLEDIAGVF-RE 214 Query: 177 P 177 P Sbjct: 215 P 215 >gi|257486916|ref|ZP_05640957.1| hypothetical protein PsyrptA_26815 [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 229 Score = 44.7 bits (105), Expect = 0.005, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 50/166 (30%), Gaps = 39/166 (23%) Query: 7 KIALFIDGANLYA---SSKALGFDIDYRKLLKAFRS----RAIVIRAYYYTTVVGDPEQQ 59 + A F+DG NL+ + + +D LL + ++T+ V Sbjct: 2 RTACFVDGYNLFYGLLAGTKYKW-LDLPSLLAHILRVEHPENTLASVSFFTSGVKPSLAS 60 Query: 60 F-----SPLHPLLDWLHYNGFQV-----------------VAKVAKEFTENCGRKRVKSS 97 L L G V + A + K + Sbjct: 61 RGILSKEAQDSYLRALIARGVSVNYGRHQLESGKAPRFVDKSTPASRLDQVDIWKLEEKE 120 Query: 98 MDVELAVDAFEQS---------EGLEHLVIFSGDGCFTTLVAALQR 134 DV +A+ + + + L+ LV+ S D T + AL+ Sbjct: 121 TDVHIAISMYRLAARQAGLMQEDRLQQLVLVSADTDMTPALRALRE 166 >gi|254464182|ref|ZP_05077593.1| protein containing DUF88 [Rhodobacterales bacterium Y4I] gi|206685090|gb|EDZ45572.1| protein containing DUF88 [Rhodobacterales bacterium Y4I] Length = 245 Score = 44.7 bits (105), Expect = 0.005, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 58/177 (32%), Gaps = 28/177 (15%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 +A+ ID N+ S+K D S Y G Q ++ L Sbjct: 10 LAVLIDADNI--SAKYAEAMFD------EIASFGEASIRRIYGDFAGGSPQGWNKEK--L 59 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCF 125 L Q +F G+ D+ L +DA + S + V+ S D F Sbjct: 60 AALAIVPHQ-------QFANTTGKNAS----DIALVIDAMDILHSGRFDGFVLISSDSDF 108 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182 T L + ++ + V + + + + F+ + L + + + KK Sbjct: 109 TRLASRIREQGLDVYGMGMRKTPAAFV-----KACKRFIYVENLLEDPGKSKPKAKK 160 >gi|183982600|ref|YP_001850891.1| hypothetical protein MMAR_2590 [Mycobacterium marinum M] gi|183175926|gb|ACC41036.1| conserved hypothetical protein [Mycobacterium marinum M] Length = 288 Score = 44.7 bits (105), Expect = 0.005, Method: Composition-based stats. Identities = 33/182 (18%), Positives = 58/182 (31%), Gaps = 41/182 (22%) Query: 7 KIALFID-------------GANLYASSKALGFD--------IDYRKLLKAFRSRAIVIR 45 ++A++ D G N + K+ G + +D ++ S ++ Sbjct: 8 RVAVYFDFDNIVISRYEQVHGRNTFHRDKSKGLEQERLQLATVDLGAIIDFASSFGTLVL 67 Query: 46 AYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVD 105 Y D + Q+V + K+ D+ LAVD Sbjct: 68 TRAYADWSADVNAGYHG-------------QLVGRAVDLVQLFPAASYGKNGADIRLAVD 114 Query: 106 AFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADY 162 A E L H+VI GD + L +R + V + + +S L D Sbjct: 115 AVEDMFRLPDLTHVVIVGGDSDYIALAQRCKRLGRYVVGIGVAGA----SSGSLAAACDE 170 Query: 163 FM 164 F+ Sbjct: 171 FV 172 >gi|240168411|ref|ZP_04747070.1| hypothetical protein MkanA1_03812 [Mycobacterium kansasii ATCC 12478] Length = 251 Score = 44.7 bits (105), Expect = 0.005, Method: Composition-based stats. Identities = 29/121 (23%), Positives = 43/121 (35%), Gaps = 26/121 (21%) Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG-----LEHLVI 118 P +D L GF V AK + + R D E + L LV+ Sbjct: 120 RPWVDALRNVGFAVFAKPKIDEDSDVDR-------------DMLEHIDKRYREGLAALVV 166 Query: 119 FSGDGC-FTTLVAALQRKVKKVTIVSTVLSDP-SMASDQLRRQADYFMDLAYLKNEIARD 176 S DG F + + R V ++ ++ASD L F+DL + R+ Sbjct: 167 ASADGQAFRQPLEEISRGGIPVQVLGFREHASWALASDTL-----EFVDLEDIAGVF-RE 220 Query: 177 P 177 P Sbjct: 221 P 221 >gi|167760471|ref|ZP_02432598.1| hypothetical protein CLOSCI_02845 [Clostridium scindens ATCC 35704] gi|167661837|gb|EDS05967.1| hypothetical protein CLOSCI_02845 [Clostridium scindens ATCC 35704] Length = 311 Score = 44.7 bits (105), Expect = 0.005, Method: Composition-based stats. Identities = 20/85 (23%), Positives = 34/85 (40%), Gaps = 9/85 (10%) Query: 99 DVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156 D + +DA + + ++ I S D FT LV+ ++ K V + + Sbjct: 75 DSAMIIDAMDILYTNDVDGFCIVSSDSDFTRLVSRIRESGKMVIGMGENKTPEPF----- 129 Query: 157 RRQADYFMDLAYLKNEIARDPDEDK 181 R+ D F L L N ++P K Sbjct: 130 RKACDKFTILENLLN--EQEPGSPK 152 >gi|331700345|ref|YP_004336584.1| hypothetical protein Psed_6643 [Pseudonocardia dioxanivorans CB1190] gi|326955034|gb|AEA28731.1| hypothetical protein Psed_6643 [Pseudonocardia dioxanivorans CB1190] Length = 207 Score = 44.7 bits (105), Expect = 0.005, Method: Composition-based stats. Identities = 27/122 (22%), Positives = 46/122 (37%), Gaps = 27/122 (22%) Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE-GLE-----HLV 117 P ++ L GF V AK K ++ + D + + H+V Sbjct: 75 RPWVEALRNVGFAVFAKP-KTTEDSDVDE------------DMLRHIQLRADEGVLRHVV 121 Query: 118 IFSGDGC-FTTLVAALQRKVKKVTIVST-VLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 + SGDG F + L K VT++ + ++ S+ L F+DL + R Sbjct: 122 VASGDGRAFREPLEELVAKGAGVTVIGFREYATFALNSEVL-----EFVDLEDIDGVF-R 175 Query: 176 DP 177 +P Sbjct: 176 EP 177 >gi|188993344|ref|YP_001905354.1| hypothetical protein xccb100_3949 [Xanthomonas campestris pv. campestris str. B100] gi|167735104|emb|CAP53316.1| Conserved hypothetical protein [Xanthomonas campestris pv. campestris] Length = 277 Score = 44.7 bits (105), Expect = 0.006, Method: Composition-based stats. Identities = 31/172 (18%), Positives = 51/172 (29%), Gaps = 29/172 (16%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 +P ++IAL ID N A ID ++ Y Sbjct: 4 NPDKRIALLIDADN------APAGKID-----------VVLAEVARYGVANVRRAYGNWK 46 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 L W + + ++F + G+ D+ + +DA + + L+ I S Sbjct: 47 SPHLKSWEAAL-HEYAIRPIQQFAYSSGKNAS----DMAMVIDAMDLLYARNLDGFAIVS 101 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 D FT LV L KV + F + L + Sbjct: 102 SDADFTPLVMRLLTDGMKVYGFGEKKTLAPFV-----NACSKFTYVEALGEQ 148 >gi|224371902|ref|YP_002606068.1| hypothetical protein HRM2_48560 [Desulfobacterium autotrophicum HRM2] gi|223694621|gb|ACN17904.1| conserved hypothetical protein [Desulfobacterium autotrophicum HRM2] Length = 239 Score = 44.7 bits (105), Expect = 0.006, Method: Composition-based stats. Identities = 23/106 (21%), Positives = 38/106 (35%), Gaps = 11/106 (10%) Query: 80 KVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVIFSGDGCFTTLVAALQRKVK 137 K A + + K+S D L +DA + L+ + S D FT L ++ Sbjct: 59 KHAIQPIQQFSYTIGKNSTDSSLIIDAMDLLHEQRLDGFCLVSSDSDFTRLATRIRESGL 118 Query: 138 KVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE----IARDPDE 179 V + + S D F+ L+ + I R+ DE Sbjct: 119 TVYGFGEKKTPEAFVS-----ACDKFVYTEILRPQNKDNIPRESDE 159 >gi|240103393|ref|YP_002959702.1| hypothetical protein TGAM_1336 [Thermococcus gammatolerans EJ3] gi|239910947|gb|ACS33838.1| Conserved hypothetical protein [Thermococcus gammatolerans EJ3] Length = 169 Score = 44.7 bits (105), Expect = 0.006, Method: Composition-based stats. Identities = 36/169 (21%), Positives = 67/169 (39%), Gaps = 32/169 (18%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 ++IAL IDG N+ K LG + L++ + A Q++P Sbjct: 30 KRIALLIDGPNMLR--KELGVKL--EDLVEVLSEIGDIRVAKVVL-------NQYAP-QG 77 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDG 123 L++ + GF+ + G VK LAV+A + + ++ + I + + Sbjct: 78 LIEAVSNQGFEPMV--------VSGETGVK------LAVEAMKEIYNPHIDVIAIATRNA 123 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 F ++ + K K+ ++ S L+ ADY + L K+E Sbjct: 124 EFLPVILKAKEKGKETIVIGVEPGF----SVALKHAADYAIVLGGEKDE 168 >gi|149912718|ref|ZP_01901252.1| hypothetical protein RAZWK3B_01980 [Roseobacter sp. AzwK-3b] gi|149813124|gb|EDM72950.1| hypothetical protein RAZWK3B_01980 [Roseobacter sp. AzwK-3b] Length = 204 Score = 44.7 bits (105), Expect = 0.006, Method: Composition-based stats. Identities = 13/82 (15%), Positives = 29/82 (35%), Gaps = 5/82 (6%) Query: 84 EFTENCGRKRVKS-SMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIV 142 E + K + + L +D + + +V+ +GD F +R+ +V + Sbjct: 127 EEKDFMLDIEQKGVDLRIGLDIDRLSLRQMVRTIVVVTGDSDFIPAFKFARREGVRVILA 186 Query: 143 STVLSDPSMASDQLRRQADYFM 164 +L+ D F+ Sbjct: 187 HMDHGVK----RELKAHTDGFI 204 >gi|21233195|ref|NP_639112.1| hypothetical protein XCC3767 [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66770137|ref|YP_244899.1| hypothetical protein XC_3839 [Xanthomonas campestris pv. campestris str. 8004] gi|21115046|gb|AAM43024.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66575469|gb|AAY50879.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. 8004] Length = 277 Score = 44.7 bits (105), Expect = 0.006, Method: Composition-based stats. Identities = 31/172 (18%), Positives = 51/172 (29%), Gaps = 29/172 (16%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 +P ++IAL ID N A ID ++ Y Sbjct: 4 NPDKRIALLIDADN------APAGKID-----------VVLAEVARYGVANVRRAYGNWK 46 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 L W + + ++F + G+ D+ + +DA + + L+ I S Sbjct: 47 SPHLKSWEAAL-HEYAIRPIQQFAYSSGKNAS----DMAMVIDAMDLLYARNLDGFAIVS 101 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 D FT LV L KV + F + L + Sbjct: 102 SDADFTPLVMRLLTDGMKVYGFGEKKTPAPFV-----NACSKFTYVEALGEQ 148 >gi|34495828|ref|NP_900043.1| hypothetical protein CV_0373 [Chromobacterium violaceum ATCC 12472] gi|34101683|gb|AAQ58051.1| conserved hypothetical protein [Chromobacterium violaceum ATCC 12472] Length = 297 Score = 44.3 bits (104), Expect = 0.006, Method: Composition-based stats. Identities = 32/162 (19%), Positives = 51/162 (31%), Gaps = 28/162 (17%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 K+A+ ID N + +L +LL I Y + + L Sbjct: 3 NRKLAVLIDADN---AQSSL-----IAELLAEVAKYGTAIVKRAY------GDWTTTQLK 48 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGD 122 + L Q ++F G K+S D L +DA + + + + S D Sbjct: 49 GWKEVL----HQYAISPIQQFAYTKG----KNSTDSALIIDAMDLLYTGNFDGFCLVSSD 100 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 FT L L+ V L + S D F+ Sbjct: 101 SDFTRLATRLREGGLTV----IGLGEQSKTPRPFIAACDKFV 138 >gi|296167427|ref|ZP_06849827.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897217|gb|EFG76823.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 239 Score = 44.3 bits (104), Expect = 0.006, Method: Composition-based stats. Identities = 32/116 (27%), Positives = 48/116 (41%), Gaps = 16/116 (13%) Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 P +D L GF V AK + + R + +EL +SEGL LV+ S DG Sbjct: 108 RPWVDALRNVGFAVFAKPKIDEDSDVDRDML---AHIEL-----RRSEGLAALVVASADG 159 Query: 124 C-FTTLVAALQRKVKKVTIVSTVLSDP-SMASDQLRRQADYFMDLAYLKNEIARDP 177 F + + R V ++ ++ASD L F+DL + R+P Sbjct: 160 QAFREPLEEISRTGVAVQVIGFREHASWALASDTL-----DFVDLEDINGVF-REP 209 >gi|257453692|ref|ZP_05618979.1| protein containing DUF88 [Enhydrobacter aerosaccus SK60] gi|257448926|gb|EEV23882.1| protein containing DUF88 [Enhydrobacter aerosaccus SK60] Length = 267 Score = 44.3 bits (104), Expect = 0.006, Method: Composition-based stats. Identities = 31/165 (18%), Positives = 57/165 (34%), Gaps = 25/165 (15%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 ++A+ ID N AS L LL + I Y Q + + Sbjct: 14 RLAVLIDADN--ASVNHL------DALLSEIATLGISSVRRAY---GDWTRPQLNSWKNV 62 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126 L L Y+ + ++F+ G+ +S+ ++ A+D +E + + S D FT Sbjct: 63 L--LSYS-----IQPIQQFSYTTGKNATDASLIID-AMDLL-YTERFDGFCLVSSDSDFT 113 Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 L ++ + V S + D F L + + Sbjct: 114 RLAQRIREQGLLV-----YGFGRSTTPKPFVQACDRFTYLEFFEE 153 >gi|237784873|ref|YP_002905578.1| hypothetical protein ckrop_0248 [Corynebacterium kroppenstedtii DSM 44385] gi|237757785|gb|ACR17035.1| hypothetical protein ckrop_0248 [Corynebacterium kroppenstedtii DSM 44385] Length = 228 Score = 44.3 bits (104), Expect = 0.006, Method: Composition-based stats. Identities = 23/117 (19%), Positives = 38/117 (32%), Gaps = 24/117 (20%) Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE-GLEHLVI-- 118 + P +D L GF V AK K F + D + V+ Sbjct: 92 SIRPWIDALRNLGFAVFAKP-KLFDDTDVDP------------DMLAHINRRYDEGVLRS 138 Query: 119 ---FSGDG-CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 S DG F + L + V ++ A+ + +A F+DL + + Sbjct: 139 VYVASADGRNFQPRLEELAAEGIDVAVLGFY----EHATWAVMSEAIRFVDLEDIPD 191 >gi|325290777|ref|YP_004266958.1| protein of unknown function DUF88 [Syntrophobotulus glycolicus DSM 8271] gi|324966178|gb|ADY56957.1| protein of unknown function DUF88 [Syntrophobotulus glycolicus DSM 8271] Length = 274 Score = 44.3 bits (104), Expect = 0.006, Method: Composition-based stats. Identities = 28/170 (16%), Positives = 59/170 (34%), Gaps = 26/170 (15%) Query: 11 FIDGANLYASSKALGFDIDYRKLLKAFRSRA-----IVIRAYYYTTVVGDPEQQFSPLHP 65 FID N++ G I ++A A + + Y + + + Sbjct: 6 FIDYENIWTGLAEKGCRIMPEVFIEALHKYAQSIDVELSVIFLYANFDKEEFWRMQTVFE 65 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSM-DVELAVDA----FEQSEGLEHLVIFS 120 + + + + + ++ + D EL ++A + + + ++F+ Sbjct: 66 KKSIITRHVYG---------KNSFAQTELRPNAADHELMLEAQEILLTRPDSFDIFLLFT 116 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLR---RQADYFMDLA 167 GDG F +LV ++ KKV I+ L D F++L Sbjct: 117 GDGDFMSLVRKIRAWGKKVKII----GVKGKIHHDLEPFCESMDVFLELT 162 >gi|192292848|ref|YP_001993453.1| hypothetical protein Rpal_4482 [Rhodopseudomonas palustris TIE-1] gi|192286597|gb|ACF02978.1| conserved hypothetical protein [Rhodopseudomonas palustris TIE-1] Length = 267 Score = 44.3 bits (104), Expect = 0.006, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 36/95 (37%), Gaps = 7/95 (7%) Query: 77 VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQR 134 ++AK A + K++ D+ L +DA + S E + S D FT L + ++ Sbjct: 57 ILAKHAIIPQQQFAYTTGKNASDITLVIDAMDLLHSGRFEGFCLVSSDSDFTRLASRIRE 116 Query: 135 KVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 + V + + R+ F+ L Sbjct: 117 QGVDV----FGFGEQK-TPESFRQACRRFVYTENL 146 >gi|39937021|ref|NP_949297.1| hypothetical protein RPA3960 [Rhodopseudomonas palustris CGA009] gi|39650878|emb|CAE29401.1| conserved unknown protein [Rhodopseudomonas palustris CGA009] Length = 267 Score = 44.3 bits (104), Expect = 0.006, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 36/95 (37%), Gaps = 7/95 (7%) Query: 77 VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQR 134 ++AK A + K++ D+ L +DA + S E + S D FT L + ++ Sbjct: 57 ILAKHAIIPQQQFAYTTGKNASDITLVIDAMDLLHSGRFEGFCLVSSDSDFTRLASRIRE 116 Query: 135 KVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 + V + + R+ F+ L Sbjct: 117 QGVDV----FGFGEQK-TPESFRQACRRFVYTENL 146 >gi|257075430|ref|ZP_05569791.1| hypothetical protein Faci_00130 [Ferroplasma acidarmanus fer1] Length = 193 Score = 44.3 bits (104), Expect = 0.007, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 7/68 (10%) Query: 70 LHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTT 127 L GF+ V+ + + +DV+LA+DA E L+I SGDG F Sbjct: 91 LKNIGFETVSSPLMYRKQG----IFEKGVDVKLAMDATELIHSGIFHRLIIVSGDGDFYP 146 Query: 128 LVA-ALQR 134 + A++ Sbjct: 147 VAELAVRN 154 >gi|317126626|ref|YP_004100738.1| hypothetical protein Intca_3537 [Intrasporangium calvum DSM 43043] gi|315590714|gb|ADU50011.1| hypothetical protein Intca_3537 [Intrasporangium calvum DSM 43043] Length = 359 Score = 44.3 bits (104), Expect = 0.007, Method: Composition-based stats. Identities = 30/171 (17%), Positives = 60/171 (35%), Gaps = 28/171 (16%) Query: 9 ALFIDGANLYASS--KALGFD------IDYRKLLKAFRSRAI------VIRAYYYTTVVG 54 AL++D L A++ + G I Y L+ +A ++R +Y + Sbjct: 6 ALYVDAGYLLAAAATRVTGTSLRGSVVISYPDLVTGLVDQAESLSGLPLLRLNWYDSGNR 65 Query: 55 DPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG-- 112 + G K+ T G ++ +D+ + +D Sbjct: 66 PGGAPDATQES-------IGMLPRVKLRLGRTSPHGEQK---GVDLRIGLDLAAHGRNHV 115 Query: 113 LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTV--LSDPSMASDQLRRQAD 161 ++ + + SGD + V Q +V I++ P S+ L R++D Sbjct: 116 VDIMYLVSGDDDLSEAVEEAQSHGAQVVILAVPDQSGRPHAVSNHLVRESD 166 >gi|301117790|ref|XP_002906623.1| conserved hypothetical protein [Phytophthora infestans T30-4] gi|262107972|gb|EEY66024.1| conserved hypothetical protein [Phytophthora infestans T30-4] Length = 564 Score = 44.3 bits (104), Expect = 0.007, Method: Composition-based stats. Identities = 37/170 (21%), Positives = 65/170 (38%), Gaps = 19/170 (11%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRS-RAIVIRAYYYTTVVGDPEQQFSPLHPL 66 AL IDGA ++LG +ID+ +L + +Y S L Sbjct: 15 TALIIDGAYARIHGRSLGGNIDFSRLRTELEEIASTEFDECWYFDSQRRDAPGNSQLASE 74 Query: 67 LDWLHYN---GFQV-----VAKVAKEFTENCGRKR---VKSSMDVELAVDAFEQS--EGL 113 L Y G Q+ K +CG K V+ +D +A + + Sbjct: 75 FHALKYARPRGPQLQVEIYSTKPRSCKCTSCGHKFNQNVQKGVDNGIATKLLTLTLTRNI 134 Query: 114 EHLVIFSGDGCFTTLVAALQRKVKK-VTIVSTVLSDPSMASDQLRRQADY 162 E +++ SGDG F T + ++ ++ + V +V + + S L++ A Sbjct: 135 ERVILVSGDGDFYTSLRYVRNELAREVWVVGFLDT----VSGDLQQLASQ 180 >gi|332184991|ref|ZP_08386740.1| hypothetical protein SUS17_244 [Sphingomonas sp. S17] gi|332014715|gb|EGI56771.1| hypothetical protein SUS17_244 [Sphingomonas sp. S17] Length = 258 Score = 44.3 bits (104), Expect = 0.007, Method: Composition-based stats. Identities = 33/176 (18%), Positives = 59/176 (33%), Gaps = 30/176 (17%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 IAL ID N +++ ID +L V Y L Sbjct: 8 IALLIDADNAQSAA------IDP--VLTVLAELGTVNVRRAY------GNWSKPGLKGWR 53 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCF 125 D V+ K E + + K++ D+++ +DA + ++ I S D F Sbjct: 54 D--------VMVKHGIEPQQQFDLTKGKNATDMKMTIDAMDLLFRGRIDGFGIMSSDSDF 105 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD-PDED 180 L +++ + S + ++ F+D+ L NE R P + Sbjct: 106 MPLATRIRQDG--FPVYGFGNSR---TPEAFKQACSRFIDVGALINEAPRPMPSKP 156 >gi|307331746|ref|ZP_07610850.1| conserved hypothetical protein [Streptomyces violaceusniger Tu 4113] gi|306882612|gb|EFN13694.1| conserved hypothetical protein [Streptomyces violaceusniger Tu 4113] Length = 305 Score = 44.3 bits (104), Expect = 0.007, Method: Composition-based stats. Identities = 37/189 (19%), Positives = 65/189 (34%), Gaps = 37/189 (19%) Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53 A+F+D +YA++ L F++D L++AF +A ++R Y++ Sbjct: 37 AIFVDAGYVYAAAGRLVAGTEDRRAFELDAEGLIEAFIDKARTIFPDSRLLRVYWFDGAR 96 Query: 54 GD---PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110 PEQQ P K N + +D + D + Sbjct: 97 RRIHTPEQQSIAELP---------------DVKVRLGNLNANNQQKGVDSLIRSDLESLA 141 Query: 111 EG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDL 166 + V+ GD + V A Q +V + D ++ L + D DL Sbjct: 142 RHRAIGDAVLIGGDEDLVSAVEAAQGYGARVHLWGIEALDGRNQAEPLLWEVDSQRTFDL 201 Query: 167 AYLKNEIAR 175 + K + R Sbjct: 202 DFCKPYVTR 210 >gi|154506256|ref|ZP_02042994.1| hypothetical protein RUMGNA_03798 [Ruminococcus gnavus ATCC 29149] gi|153793444|gb|EDN75864.1| hypothetical protein RUMGNA_03798 [Ruminococcus gnavus ATCC 29149] Length = 320 Score = 44.3 bits (104), Expect = 0.007, Method: Composition-based stats. Identities = 41/168 (24%), Positives = 64/168 (38%), Gaps = 27/168 (16%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRK-LLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 E+ AL ID N+ S+K Y K +L V Y + GD ++ Sbjct: 3 ERYALLIDADNV--SAK-------YIKPILDELSKYGNVT----YKRIYGDWTSTYNS-- 47 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 + L N ++F+ G+ S+M ++ A+D SE LE + S D Sbjct: 48 SWKEVLLQNSIT----PIQQFSYTHGKNATDSAMIID-AMDMLYTSE-LEGFCLVSSDSD 101 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 FT L + L+ K V + + P R+ D F L L + Sbjct: 102 FTKLASRLRESGKMVIGMGEDKTPPPF-----RKACDIFTVLELLLED 144 >gi|254233594|ref|ZP_04926920.1| conserved hypothetical protein [Mycobacterium tuberculosis C] gi|254366657|ref|ZP_04982701.1| conserved hypothetical protein [Mycobacterium tuberculosis str. Haarlem] gi|124603387|gb|EAY61662.1| conserved hypothetical protein [Mycobacterium tuberculosis C] gi|134152169|gb|EBA44214.1| conserved hypothetical protein [Mycobacterium tuberculosis str. Haarlem] Length = 243 Score = 44.3 bits (104), Expect = 0.007, Method: Composition-based stats. Identities = 30/121 (24%), Positives = 44/121 (36%), Gaps = 26/121 (21%) Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG-----LEHLVI 118 P +D L GF V AK K D ++ D + L LV+ Sbjct: 112 RPWVDALRNVGFAVFAKP-------------KVDEDSDVDRDMLAHIDERYREGLAALVV 158 Query: 119 FSGDGC-FTTLVAALQRKVKKVTIVSTVLSDP-SMASDQLRRQADYFMDLAYLKNEIARD 176 S DG F + A+ R V ++ ++ASD L F+DL + R+ Sbjct: 159 ASADGQAFRQPLEAVARSGTPVQVLGFREHASWALASDTL-----EFVDLEDIAGVF-RE 212 Query: 177 P 177 P Sbjct: 213 P 213 >gi|15607348|ref|NP_214721.1| hypothetical protein Rv0207c [Mycobacterium tuberculosis H37Rv] gi|31791385|ref|NP_853878.1| hypothetical protein Mb0213c [Mycobacterium bovis AF2122/97] gi|121636119|ref|YP_976342.1| hypothetical protein BCG_0244c [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148659971|ref|YP_001281494.1| hypothetical protein MRA_0215 [Mycobacterium tuberculosis H37Ra] gi|148821400|ref|YP_001286154.1| hypothetical protein TBFG_10209 [Mycobacterium tuberculosis F11] gi|167968795|ref|ZP_02551072.1| hypothetical protein MtubH3_12470 [Mycobacterium tuberculosis H37Ra] gi|215406200|ref|ZP_03418381.1| hypothetical protein Mtub0_21436 [Mycobacterium tuberculosis 02_1987] gi|215414075|ref|ZP_03422732.1| hypothetical protein Mtub9_22088 [Mycobacterium tuberculosis 94_M4241A] gi|215425412|ref|ZP_03423331.1| hypothetical protein MtubT9_03091 [Mycobacterium tuberculosis T92] gi|215433128|ref|ZP_03431047.1| hypothetical protein MtubE_21314 [Mycobacterium tuberculosis EAS054] gi|215448487|ref|ZP_03435239.1| hypothetical protein MtubT_22033 [Mycobacterium tuberculosis T85] gi|218755944|ref|ZP_03534740.1| hypothetical protein MtubG1_22014 [Mycobacterium tuberculosis GM 1503] gi|219556006|ref|ZP_03535082.1| hypothetical protein MtubT1_01380 [Mycobacterium tuberculosis T17] gi|224988592|ref|YP_002643279.1| hypothetical protein JTY_0213 [Mycobacterium bovis BCG str. Tokyo 172] gi|254549146|ref|ZP_05139593.1| hypothetical protein Mtube_01561 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260185072|ref|ZP_05762546.1| hypothetical protein MtubCP_03350 [Mycobacterium tuberculosis CPHL_A] gi|260199209|ref|ZP_05766700.1| hypothetical protein MtubT4_03465 [Mycobacterium tuberculosis T46] gi|260203352|ref|ZP_05770843.1| hypothetical protein MtubK8_03435 [Mycobacterium tuberculosis K85] gi|289441583|ref|ZP_06431327.1| conserved hypothetical protein [Mycobacterium tuberculosis T46] gi|289445739|ref|ZP_06435483.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A] gi|289568110|ref|ZP_06448337.1| conserved hypothetical protein [Mycobacterium tuberculosis T17] gi|289572787|ref|ZP_06453014.1| conserved hypothetical protein [Mycobacterium tuberculosis K85] gi|289747974|ref|ZP_06507352.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] gi|289748683|ref|ZP_06508061.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] gi|289756272|ref|ZP_06515650.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] gi|289760310|ref|ZP_06519688.1| conserved hypothetical protein [Mycobacterium tuberculosis T85] gi|289764323|ref|ZP_06523701.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] gi|294994680|ref|ZP_06800371.1| hypothetical protein Mtub2_09257 [Mycobacterium tuberculosis 210] gi|297632687|ref|ZP_06950467.1| hypothetical protein MtubK4_01111 [Mycobacterium tuberculosis KZN 4207] gi|297729661|ref|ZP_06958779.1| hypothetical protein MtubKR_01136 [Mycobacterium tuberculosis KZN R506] gi|298527599|ref|ZP_07015008.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|313656987|ref|ZP_07813867.1| hypothetical protein MtubKV_01121 [Mycobacterium tuberculosis KZN V2475] gi|1871580|emb|CAB07002.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv] gi|31616970|emb|CAD93077.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97] gi|121491766|emb|CAL70228.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148504123|gb|ABQ71932.1| hypothetical protein MRA_0215 [Mycobacterium tuberculosis H37Ra] gi|148719927|gb|ABR04552.1| conserved hypothetical protein [Mycobacterium tuberculosis F11] gi|224771705|dbj|BAH24511.1| hypothetical protein JTY_0213 [Mycobacterium bovis BCG str. Tokyo 172] gi|289414502|gb|EFD11742.1| conserved hypothetical protein [Mycobacterium tuberculosis T46] gi|289418697|gb|EFD15898.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A] gi|289537218|gb|EFD41796.1| conserved hypothetical protein [Mycobacterium tuberculosis K85] gi|289541863|gb|EFD45512.1| conserved hypothetical protein [Mycobacterium tuberculosis T17] gi|289688502|gb|EFD55990.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] gi|289689270|gb|EFD56699.1| conserved hypothetical protein [Mycobacterium tuberculosis T92] gi|289696859|gb|EFD64288.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054] gi|289711829|gb|EFD75845.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] gi|289715874|gb|EFD79886.1| conserved hypothetical protein [Mycobacterium tuberculosis T85] gi|298497393|gb|EFI32687.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|326905962|gb|EGE52895.1| hypothetical protein TBPG_03934 [Mycobacterium tuberculosis W-148] gi|328456916|gb|AEB02339.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 4207] Length = 242 Score = 44.3 bits (104), Expect = 0.007, Method: Composition-based stats. Identities = 30/121 (24%), Positives = 44/121 (36%), Gaps = 26/121 (21%) Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG-----LEHLVI 118 P +D L GF V AK K D ++ D + L LV+ Sbjct: 111 RPWVDALRNVGFAVFAKP-------------KVDEDSDVDRDMLAHIDERYREGLAALVV 157 Query: 119 FSGDGC-FTTLVAALQRKVKKVTIVSTVLSDP-SMASDQLRRQADYFMDLAYLKNEIARD 176 S DG F + A+ R V ++ ++ASD L F+DL + R+ Sbjct: 158 ASADGQAFRQPLEAVARSGTPVQVLGFREHASWALASDTL-----EFVDLEDIAGVF-RE 211 Query: 177 P 177 P Sbjct: 212 P 212 >gi|15839587|ref|NP_334624.1| hypothetical protein MT0217 [Mycobacterium tuberculosis CDC1551] gi|253797129|ref|YP_003030130.1| hypothetical protein TBMG_00208 [Mycobacterium tuberculosis KZN 1435] gi|308231492|ref|ZP_07663868.1| hypothetical protein TMAG_01343 [Mycobacterium tuberculosis SUMu001] gi|308369333|ref|ZP_07417377.2| hypothetical protein TMBG_02678 [Mycobacterium tuberculosis SUMu002] gi|308370343|ref|ZP_07666914.1| hypothetical protein TMCG_02418 [Mycobacterium tuberculosis SUMu003] gi|308371617|ref|ZP_07667213.1| hypothetical protein TMDG_01679 [Mycobacterium tuberculosis SUMu004] gi|308372834|ref|ZP_07667465.1| hypothetical protein TMEG_00637 [Mycobacterium tuberculosis SUMu005] gi|308373915|ref|ZP_07434096.2| hypothetical protein TMFG_03169 [Mycobacterium tuberculosis SUMu006] gi|308375097|ref|ZP_07667943.1| hypothetical protein TMGG_01685 [Mycobacterium tuberculosis SUMu007] gi|308376336|ref|ZP_07438459.2| hypothetical protein TMHG_03210 [Mycobacterium tuberculosis SUMu008] gi|308378578|ref|ZP_07483059.2| hypothetical protein TMIG_00494 [Mycobacterium tuberculosis SUMu009] gi|308379722|ref|ZP_07669031.1| hypothetical protein TMJG_01392 [Mycobacterium tuberculosis SUMu010] gi|308380924|ref|ZP_07669316.1| hypothetical protein TMKG_01392 [Mycobacterium tuberculosis SUMu011] gi|308394870|ref|ZP_07491797.2| hypothetical protein TMLG_00955 [Mycobacterium tuberculosis SUMu012] gi|13879702|gb|AAK44438.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551] gi|253318632|gb|ACT23235.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 1435] gi|308217130|gb|EFO76529.1| hypothetical protein TMAG_01343 [Mycobacterium tuberculosis SUMu001] gi|308327968|gb|EFP16819.1| hypothetical protein TMBG_02678 [Mycobacterium tuberculosis SUMu002] gi|308332348|gb|EFP21199.1| hypothetical protein TMCG_02418 [Mycobacterium tuberculosis SUMu003] gi|308336100|gb|EFP24951.1| hypothetical protein TMDG_01679 [Mycobacterium tuberculosis SUMu004] gi|308339731|gb|EFP28582.1| hypothetical protein TMEG_00637 [Mycobacterium tuberculosis SUMu005] gi|308343736|gb|EFP32587.1| hypothetical protein TMFG_03169 [Mycobacterium tuberculosis SUMu006] gi|308347457|gb|EFP36308.1| hypothetical protein TMGG_01685 [Mycobacterium tuberculosis SUMu007] gi|308351507|gb|EFP40358.1| hypothetical protein TMHG_03210 [Mycobacterium tuberculosis SUMu008] gi|308352084|gb|EFP40935.1| hypothetical protein TMIG_00494 [Mycobacterium tuberculosis SUMu009] gi|308356034|gb|EFP44885.1| hypothetical protein TMJG_01392 [Mycobacterium tuberculosis SUMu010] gi|308359989|gb|EFP48840.1| hypothetical protein TMKG_01392 [Mycobacterium tuberculosis SUMu011] gi|308367555|gb|EFP56406.1| hypothetical protein TMLG_00955 [Mycobacterium tuberculosis SUMu012] gi|323717196|gb|EGB26405.1| hypothetical protein TMMG_00636 [Mycobacterium tuberculosis CDC1551A] Length = 244 Score = 44.3 bits (104), Expect = 0.007, Method: Composition-based stats. Identities = 30/121 (24%), Positives = 44/121 (36%), Gaps = 26/121 (21%) Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG-----LEHLVI 118 P +D L GF V AK K D ++ D + L LV+ Sbjct: 113 RPWVDALRNVGFAVFAKP-------------KVDEDSDVDRDMLAHIDERYREGLAALVV 159 Query: 119 FSGDGC-FTTLVAALQRKVKKVTIVSTVLSDP-SMASDQLRRQADYFMDLAYLKNEIARD 176 S DG F + A+ R V ++ ++ASD L F+DL + R+ Sbjct: 160 ASADGQAFRQPLEAVARSGTPVQVLGFREHASWALASDTL-----EFVDLEDIAGVF-RE 213 Query: 177 P 177 P Sbjct: 214 P 214 >gi|328881764|emb|CCA55003.1| hypothetical protein SVEN_1716 [Streptomyces venezuelae ATCC 10712] Length = 447 Score = 44.3 bits (104), Expect = 0.007, Method: Composition-based stats. Identities = 28/147 (19%), Positives = 58/147 (39%), Gaps = 18/147 (12%) Query: 25 GFDIDYRKLLKAFRSRAI------VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVV 78 +D+ L++ RA ++R Y++ G P++ P H L + +V Sbjct: 29 RITVDHAGLIQQLSQRAEAETALPLLRIYWF---DGAPDRVPQPEHRRLRVMP----RVT 81 Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136 ++ T + GR K +D + + E + +V+ +GDG + + + Sbjct: 82 VRLG-ALTRSDGRWAQKG-VDAAMHTELTELARNRACSDIVLVTGDGDLLPGLMSAKEHG 139 Query: 137 KKVTIVSTVLSDPS-MASDQLRRQADY 162 V + + +D S+ L +AD Sbjct: 140 VAVHLWAVQAADGDYNQSEDLVAEADE 166 >gi|254819495|ref|ZP_05224496.1| hypothetical protein MintA_06199 [Mycobacterium intracellulare ATCC 13950] Length = 200 Score = 44.3 bits (104), Expect = 0.007, Method: Composition-based stats. Identities = 31/156 (19%), Positives = 52/156 (33%), Gaps = 22/156 (14%) Query: 28 IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTE 87 +D +L S ++ Y D + Q+VA+ Sbjct: 56 VDVGAILDYASSFGTLVLTRAYADWSADINAGYRG-------------QLVARAVDLVQL 102 Query: 88 NCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVST 144 K+ D+ LAVDA E L H+VI +GD + L +R + V + Sbjct: 103 FPAAAYGKNGADIRLAVDAVEDMFRLPDLTHVVIVAGDSDYIPLAQRCKRLGRYVVGIGV 162 Query: 145 VLSDPSMASDQLRRQADYFMDLAYLKNE--IARDPD 178 + +S L + F+ L + R+P Sbjct: 163 AGA----SSRALAAACEEFVVYDALPGVPALDREPG 194 >gi|197301939|ref|ZP_03167003.1| hypothetical protein RUMLAC_00661 [Ruminococcus lactaris ATCC 29176] gi|197299007|gb|EDY33543.1| hypothetical protein RUMLAC_00661 [Ruminococcus lactaris ATCC 29176] Length = 322 Score = 44.3 bits (104), Expect = 0.007, Method: Composition-based stats. Identities = 37/168 (22%), Positives = 60/168 (35%), Gaps = 27/168 (16%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRK-LLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 ++ AL ID N+ S+K Y K +L V Y + Sbjct: 3 DRFALLIDADNV--SAK-------YIKPILDELSKYGNVTYKRIYGDWTKTNNASWK--- 50 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 + L N ++F+ G+ S+M ++ A+D SE LE + S D Sbjct: 51 ---EELLQNSIT----PIQQFSYTHGKNATDSAMIID-AMDMLYTSE-LEGFCLVSSDSD 101 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 FT L + L+ K V + + R+ D F +L L + Sbjct: 102 FTKLASRLRESGKTVIGMGEGKTPSPF-----RKACDIFTELELLLED 144 >gi|32473273|ref|NP_866267.1| hypothetical protein RB4721 [Rhodopirellula baltica SH 1] gi|32397952|emb|CAD73953.1| conserved hypothetical protein [Rhodopirellula baltica SH 1] Length = 242 Score = 44.3 bits (104), Expect = 0.007, Method: Composition-based stats. Identities = 35/182 (19%), Positives = 60/182 (32%), Gaps = 31/182 (17%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 P IAL ID N A I++ I+ Y V Sbjct: 5 HPEGSIALLIDADN------APSSKIEF-----------IISELATYGIVNIRKAYGNWT 47 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 L W++ V+ + A T+ + K++ D+ L +DA + + + + S Sbjct: 48 KRGLEGWIN-----VLHEYAIAPTQCFDLIKGKNATDMALLIDAMDILYTRQVNTFGLVS 102 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 D FT LV L+ K+V S +F+ L + P + Sbjct: 103 SDCDFTPLVCRLREDGKQVIGFGRQNSPAPFVL-----ACSHFIYLDE--EPTEKAPPKK 155 Query: 181 KK 182 ++ Sbjct: 156 RR 157 >gi|309781025|ref|ZP_07675764.1| conserved hypothetical protein [Ralstonia sp. 5_7_47FAA] gi|308920328|gb|EFP65986.1| conserved hypothetical protein [Ralstonia sp. 5_7_47FAA] Length = 247 Score = 44.3 bits (104), Expect = 0.008, Method: Composition-based stats. Identities = 30/173 (17%), Positives = 52/173 (30%), Gaps = 29/173 (16%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M ++A+ ID N A+ ++LL+ Y Sbjct: 9 MAQDALRLAVLIDADNASAAV--------IKELLEEVAK---------YGVATVKRSYGD 51 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118 L+ W + + A + + + K+S D +DA + ++ + Sbjct: 52 WTTQNLVGWKDHL-----HRHAIQPMQQFAYTKGKNSTDSACIIDAMDLLYGGNVDGFCL 106 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 S D FT L L+ K V D D F+ + LK Sbjct: 107 VSSDSDFTRLATRLREAGKVVYGFGERK-----TPDAFIAACDKFVFVEVLKQ 154 >gi|224371038|ref|YP_002605202.1| hypothetical protein HRM2_39800 [Desulfobacterium autotrophicum HRM2] gi|223693755|gb|ACN17038.1| hypothetical protein HRM2_39800 [Desulfobacterium autotrophicum HRM2] Length = 236 Score = 44.0 bits (103), Expect = 0.008, Method: Composition-based stats. Identities = 31/181 (17%), Positives = 55/181 (30%), Gaps = 29/181 (16%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M + +KIALFID N AS + +L +V Y Sbjct: 1 MNESTQKIALFIDADNAPASK--------FEDVLSEVAKYGVVTIRKAY---GNWKNPCL 49 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAF--EQSEGLEHLVI 118 LL + + +++ G+ D+ L +DA ++ ++ + Sbjct: 50 KSWEELL-------HEYAIQPIQQYDLTKGKNAS----DIALVIDAMDVMYTKNIDVMCF 98 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178 S D FT +V + K V + F+ L + P Sbjct: 99 VSSDCDFTPMVTRALAEGKVVLGFGERKAPSPFV-----NACSKFLFLDQEPEQNGTTPK 153 Query: 179 E 179 + Sbjct: 154 K 154 >gi|21220543|ref|NP_626322.1| hypothetical protein SCO2062 [Streptomyces coelicolor A3(2)] gi|256788319|ref|ZP_05526750.1| hypothetical protein SlivT_27854 [Streptomyces lividans TK24] gi|5596807|emb|CAB51454.1| hypothetical protein [Streptomyces coelicolor A3(2)] Length = 403 Score = 44.0 bits (103), Expect = 0.008, Method: Composition-based stats. Identities = 30/147 (20%), Positives = 59/147 (40%), Gaps = 18/147 (12%) Query: 25 GFDIDYRKLLKAFRSRAI------VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVV 78 +D+ L++ R RA ++R Y++ G P++ P H L + +V Sbjct: 29 RITVDHAALIQGLRDRAESDTQQPLLRIYWF---DGAPDRVPQPEHRRLRVMP----RVT 81 Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136 ++ T + GR K +D + + E + +V+ +GDG + A + Sbjct: 82 VRLG-ALTRSDGRWAQKG-VDAAMHAELTELARNRACSDVVLVTGDGDLLPGMMAAKEHG 139 Query: 137 KKVTIVSTVLSDPS-MASDQLRRQADY 162 V + + +D S+ L +AD Sbjct: 140 VAVHLWAVQAADGDYNQSEDLVAEADE 166 >gi|311743916|ref|ZP_07717722.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272] gi|311313046|gb|EFQ82957.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272] Length = 325 Score = 44.0 bits (103), Expect = 0.009, Method: Composition-based stats. Identities = 27/155 (17%), Positives = 46/155 (29%), Gaps = 20/155 (12%) Query: 28 IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTE 87 +D ++ S ++ Y ++ Q+V + Sbjct: 60 VDVGAVIDYASSFGTLVLTRAYADWSAPVNAEYR-------------HQLVGRAVDLVQL 106 Query: 88 NCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVST 144 K+ D+ LAVDA E L H+VI +GD + L +R + V Sbjct: 107 FPAAAYAKNGADIRLAVDAVEDMFRLPDLTHVVIVAGDSDYIALAQRCKRLGRYV----V 162 Query: 145 VLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 + S L D + L P + Sbjct: 163 GIGVAGSTSKSLAAACDELVTYDALPGITPITPRQ 197 >gi|212224114|ref|YP_002307350.1| hypothetical protein TON_0965 [Thermococcus onnurineus NA1] gi|212009071|gb|ACJ16453.1| hypothetical protein, conserved [Thermococcus onnurineus NA1] Length = 170 Score = 44.0 bits (103), Expect = 0.009, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 32/73 (43%), Gaps = 6/73 (8%) Query: 94 VKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSM 151 V DV +A++A E +E + + + D F ++ +RK K+ ++ Sbjct: 89 VAGDTDVRIAIEAMELIYNSDVEVIALATRDADFLPIINEAKRKGKETIVIGVEPGF--- 145 Query: 152 ASDQLRRQADYFM 164 S L+ ADY + Sbjct: 146 -SVALQNAADYVI 157 >gi|294676826|ref|YP_003577441.1| hypothetical protein RCAP_rcc01279 [Rhodobacter capsulatus SB 1003] gi|294475646|gb|ADE85034.1| conserved hypothetical protein [Rhodobacter capsulatus SB 1003] Length = 214 Score = 44.0 bits (103), Expect = 0.009, Method: Composition-based stats. Identities = 23/133 (17%), Positives = 46/133 (34%), Gaps = 16/133 (12%) Query: 7 KIALFIDGANLYASSKALGFD----IDYRKLLKAF--RSRAIVIRAYYYTTVVGDPEQQF 60 + AL+IDG NLY + LG + Y +L + + ++R Y T + Sbjct: 13 RAALYIDGFNLYHAIDRLGQPHLKWLSYWRLGQVILPQKTQKLVRVVYCTAFYPGSAGKR 72 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEF-------TENCGRKRVKSSMDVELAVDAFEQS--E 111 ++ G +V + + K+ D+ LA+ + + Sbjct: 73 WRHEQVIAAQRAEGVEVALGHYVHERMMCRSCGDRWEKPTEKAG-DINLAIHLMHDAFED 131 Query: 112 GLEHLVIFSGDGC 124 +H + + D Sbjct: 132 VFDHAYLLTADSD 144 >gi|325001258|ref|ZP_08122370.1| hypothetical protein PseP1_20962 [Pseudonocardia sp. P1] Length = 203 Score = 44.0 bits (103), Expect = 0.009, Method: Composition-based stats. Identities = 26/116 (22%), Positives = 41/116 (35%), Gaps = 15/116 (12%) Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELA-VDAFEQSEGLEHLVIFSGD 122 P ++ L GF V AK + LA +D L H+V+ SGD Sbjct: 72 RPWVEALRNVGFAVFAKPKTSDDSDVDDD--------MLAHIDLRSGEGRLRHVVVASGD 123 Query: 123 GC-FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 G F + L VT++ + ++ F+DL + R+P Sbjct: 124 GRAFKDPLEKLVEGGTDVTVIGFREYAGFAQASEVIS----FLDLEDMDGVF-REP 174 >gi|319956985|ref|YP_004168248.1| hypothetical protein Nitsa_1246 [Nitratifractor salsuginis DSM 16511] gi|319419389|gb|ADV46499.1| hypothetical protein Nitsa_1246 [Nitratifractor salsuginis DSM 16511] Length = 254 Score = 44.0 bits (103), Expect = 0.009, Method: Composition-based stats. Identities = 35/183 (19%), Positives = 62/183 (33%), Gaps = 33/183 (18%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M + ++ IA+ ID N AS A+ + +LK VI Y QQ Sbjct: 1 MQEKKKHIAMLIDCDN--ASPYAI------KGILKELSKYGEVIVRQAY---GNWNSQQL 49 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVI 118 +P L L ++ K ++F G+ D+ + +DA + + L+ + Sbjct: 50 APWMERL--LEHS-----IKPIQQFDYTKGKNAT----DIAMVIDAMDIMYTKDLDGFAL 98 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178 + D FT L L +T+ F+ + R+ Sbjct: 99 VTSDSDFTPLAQRLMSNG--LTVYGFGEKK---TPKAFINSCSQFI----YTENLEREEK 149 Query: 179 EDK 181 + K Sbjct: 150 KSK 152 >gi|327540413|gb|EGF26998.1| protein containing DUF88 [Rhodopirellula baltica WH47] Length = 242 Score = 44.0 bits (103), Expect = 0.009, Method: Composition-based stats. Identities = 34/182 (18%), Positives = 62/182 (34%), Gaps = 31/182 (17%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 P IAL ID N A I++ ++ + +V Y Sbjct: 5 HPEGSIALLIDADN------APSSKIEF--IISELATYGVVNIRKAY---------GNWT 47 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 L W++ V+ + A T+ + K++ D+ L +DA + + + + S Sbjct: 48 KRGLEGWIN-----VLHEYAIAPTQCFDLIKGKNATDMALLIDAMDILYTRQVNTFGLVS 102 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 D FT LV L+ K+V S +F+ L + P + Sbjct: 103 SDCDFTPLVCRLREDGKQVIGFGRQNSPAPFVL-----ACSHFIYLDE--EPTEKTPPKK 155 Query: 181 KK 182 ++ Sbjct: 156 RR 157 >gi|322368949|ref|ZP_08043516.1| hypothetical protein ZOD2009_05667 [Haladaptatus paucihalophilus DX253] gi|320551680|gb|EFW93327.1| hypothetical protein ZOD2009_05667 [Haladaptatus paucihalophilus DX253] Length = 160 Score = 44.0 bits (103), Expect = 0.009, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 5/67 (7%) Query: 96 SSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMAS 153 +DV+LA+DA E + E ++ L I S D F ++ R + ++ S Sbjct: 82 GDVDVKLAIDATELALDERVDVLAIASRDTDFKPVLEKAARNGVRTVAIAPGEYGR---S 138 Query: 154 DQLRRQA 160 D L+ A Sbjct: 139 DALQNAA 145 >gi|224827245|ref|ZP_03700339.1| protein of unknown function DUF88 [Lutiella nitroferrum 2002] gi|224600534|gb|EEG06723.1| protein of unknown function DUF88 [Lutiella nitroferrum 2002] Length = 258 Score = 44.0 bits (103), Expect = 0.009, Method: Composition-based stats. Identities = 26/167 (15%), Positives = 50/167 (29%), Gaps = 30/167 (17%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 +A+ ID N+ + G+ D +L+ ++ Y GD + L Sbjct: 4 VAVLIDADNV-----SPGWIED---VLEEAGKLGVLALKRVY----GDFSRHDKAWRDLC 51 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCF 125 + ++F G+ D+ L +DA + S + + S D F Sbjct: 52 A-------RFAIHPIQQFPNTKGKNAS----DITLVIDAMDMLHSGRYQSFCLVSSDSDF 100 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 + L L+ +V F+ + L Sbjct: 101 SRLATRLREDGLEV-----WGFGEEKTPSAFVNACSKFVYVEVLGGV 142 >gi|330824578|ref|YP_004387881.1| hypothetical protein Alide2_1990 [Alicycliphilus denitrificans K601] gi|329309950|gb|AEB84365.1| Domain of unknown function DUF88 [Alicycliphilus denitrificans K601] Length = 239 Score = 44.0 bits (103), Expect = 0.009, Method: Composition-based stats. Identities = 30/173 (17%), Positives = 52/173 (30%), Gaps = 29/173 (16%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M ++A+ ID N A+ ++LL+ Y Sbjct: 1 MAQDALRLAVLIDADNASAAV--------IKELLEEVAK---------YGVATVKRSYGD 43 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118 L+ W + + A + + + K+S D +DA + ++ + Sbjct: 44 WTTQNLVGWKDHL-----HRHAIQPMQQFAYTKGKNSTDSACIIDAMDLLYGGNVDGFCL 98 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 S D FT L L+ K V D D F+ + LK Sbjct: 99 VSSDSDFTRLATRLREAGKVVYGFGERK-----TPDAFIAACDKFVFVEVLKQ 146 >gi|258546012|ref|ZP_05706246.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826] gi|258518741|gb|EEV87600.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826] Length = 265 Score = 44.0 bits (103), Expect = 0.010, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 54/166 (32%), Gaps = 26/166 (15%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 ++A+ ID N ASS+ + +L+ Y V + S ++ Sbjct: 17 RLAVLIDADN--ASSQTI------NAILEETTKFGDATVKRIYGNFVSGGGKWKSVINEF 68 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126 K ++F G+ M ++ A+D +E E + S D FT Sbjct: 69 -----------AIKPMQQFAYTKGKNATDGFMIID-AMDLL-YTERFEGFCLVSSDSDFT 115 Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 L L+ + V + + R F+ + L + Sbjct: 116 ALAIRLKEQG--VMVYGFGKKQ---TPEAFRNACSQFIYVENLMPK 156 >gi|58583915|ref|YP_202931.1| hypothetical protein XOO4292 [Xanthomonas oryzae pv. oryzae KACC10331] gi|58428509|gb|AAW77546.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae KACC10331] Length = 274 Score = 44.0 bits (103), Expect = 0.010, Method: Composition-based stats. Identities = 33/172 (19%), Positives = 54/172 (31%), Gaps = 29/172 (16%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 +P ++IAL ID N A ID +L + Y + Sbjct: 4 NPDKRIALLIDADN------APAGKID--VVLAEVARYGVANVRRAY------GNWKSPQ 49 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 L LH + + ++F + G+ D+ + +DA + + L+ I S Sbjct: 50 LKGWEAALHDD----AIRPIQQFAYSSGKNAS----DMAMVIDAMDLLYARNLDGFAIVS 101 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 D FT LV L KV + F + L + Sbjct: 102 SDADFTPLVMRLLTDGMKVYGFGEKKTPAPFV-----NACSKFTYVEALGQQ 148 >gi|306821460|ref|ZP_07455063.1| conserved hypothetical protein [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304550475|gb|EFM38463.1| conserved hypothetical protein [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 572 Score = 43.6 bits (102), Expect = 0.011, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 60/181 (33%), Gaps = 37/181 (20%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 D ++K A+ ID N+ K +K Y Sbjct: 2 DDQKKYAVLIDAENIAY------------KYVKYIMGEMANYGVVTY------------- 36 Query: 63 LHPLLDWLHYN--GFQ-VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLV 117 +DW N G++ V+ + A ++ K+S D + +DA + S+ ++ Sbjct: 37 KRAYMDWSAQNATGWKSVLLENAISPVQSIAYTSGKNSTDSTIIIDAMDILYSKTVDGFC 96 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF--MDLAYLKNEIAR 175 I S D FT L L+ V + S + F ++L K EI + Sbjct: 97 IVSSDSDFTKLATRLRESGMTV-----IGMGESKTPKAFIEACNSFKVLNLVVNKEEIEK 151 Query: 176 D 176 Sbjct: 152 S 152 >gi|57640691|ref|YP_183169.1| hypothetical protein TK0756 [Thermococcus kodakarensis KOD1] gi|57159015|dbj|BAD84945.1| hypothetical protein, conserved, DUF88 family [Thermococcus kodakarensis KOD1] Length = 166 Score = 43.6 bits (102), Expect = 0.011, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 38/91 (41%), Gaps = 12/91 (13%) Query: 94 VKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSM 151 V DV +A++A E ++ + + S D F ++ +R+ K+ ++ Sbjct: 85 VAGDTDVRVAIEAMELIYNSDVDVIALASRDADFLPIIIEAKRRGKETVVIGVDPGF--- 141 Query: 152 ASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182 S L+ ADY + + R E+K+ Sbjct: 142 -SVALQNAADYVIKME------GRKTPENKE 165 >gi|289772213|ref|ZP_06531591.1| conserved hypothetical protein [Streptomyces lividans TK24] gi|289702412|gb|EFD69841.1| conserved hypothetical protein [Streptomyces lividans TK24] Length = 406 Score = 43.6 bits (102), Expect = 0.011, Method: Composition-based stats. Identities = 30/147 (20%), Positives = 59/147 (40%), Gaps = 18/147 (12%) Query: 25 GFDIDYRKLLKAFRSRAI------VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVV 78 +D+ L++ R RA ++R Y++ G P++ P H L + +V Sbjct: 32 RITVDHAALIQGLRDRAESDTQQPLLRIYWF---DGAPDRVPQPEHRRLRVMP----RVT 84 Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136 ++ T + GR K +D + + E + +V+ +GDG + A + Sbjct: 85 VRLG-ALTRSDGRWAQKG-VDAAMHAELTELARNRACSDVVLVTGDGDLLPGMMAAKEHG 142 Query: 137 KKVTIVSTVLSDPS-MASDQLRRQADY 162 V + + +D S+ L +AD Sbjct: 143 VAVHLWAVQAADGDYNQSEDLVAEADE 169 >gi|325924315|ref|ZP_08185859.1| hypothetical protein XGA_4921 [Xanthomonas gardneri ATCC 19865] gi|325545180|gb|EGD16490.1| hypothetical protein XGA_4921 [Xanthomonas gardneri ATCC 19865] Length = 276 Score = 43.6 bits (102), Expect = 0.011, Method: Composition-based stats. Identities = 31/172 (18%), Positives = 51/172 (29%), Gaps = 29/172 (16%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 +P ++IAL ID N A ID ++ Y Sbjct: 6 NPDKRIALLIDADN------APAGKID-----------VVLAEVARYGVANVRRAYGNWK 48 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 L +W + ++F + G+ D+ + +DA + + L+ I S Sbjct: 49 SPHLKNWEAAL-HDYAIRPIQQFAYSSGKNAS----DMAMVIDAMDLLYARNLDGFAIVS 103 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 D FT LV L KV + F + L + Sbjct: 104 SDADFTPLVMRLLTDGMKVYGFGEKKTPAPFV-----NACSKFTYVEALGEQ 150 >gi|256822960|ref|YP_003146923.1| hypothetical protein Kkor_1743 [Kangiella koreensis DSM 16069] gi|256796499|gb|ACV27155.1| protein of unknown function DUF88 [Kangiella koreensis DSM 16069] Length = 236 Score = 43.6 bits (102), Expect = 0.011, Method: Composition-based stats. Identities = 33/166 (19%), Positives = 58/166 (34%), Gaps = 29/166 (17%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 + + IALF+D N ASSK + +L + +VI Y + + Sbjct: 2 EHNKHIALFVDADN--ASSKY------FDLILSDLANHGMVIIRKAY------GNWKNAN 47 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAF--EQSEGLEHLVIFS 120 L D L + + ++F G+ D+ +A+D + ++ + + Sbjct: 48 LKGWEDILL----EFAIQPIQQFDLTKGKNAT----DLAMAIDVMDVLYGKDVDIFCLVT 99 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 D FT L L + K V D R F++L Sbjct: 100 SDCDFTPLATRLINEGKLVFGYGETK-----TPDAFRNACTRFLEL 140 >gi|153954651|ref|YP_001395416.1| hypothetical protein CKL_2033 [Clostridium kluyveri DSM 555] gi|219855122|ref|YP_002472244.1| hypothetical protein CKR_1779 [Clostridium kluyveri NBRC 12016] gi|146347509|gb|EDK34045.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555] gi|219568846|dbj|BAH06830.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 250 Score = 43.6 bits (102), Expect = 0.011, Method: Composition-based stats. Identities = 37/180 (20%), Positives = 61/180 (33%), Gaps = 30/180 (16%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 D +KIA+ ID N+ S K + + D + Y + GD + Sbjct: 2 DKDKKIAVLIDADNV--SEKYIKYIFD------EISNHGTPT----YKRIYGDWTKPQLA 49 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 V+ + + G K+S D L +DA + S ++ I S Sbjct: 50 SWK----------NVLLNYSISPIQQYGYTTGKNSTDAALIIDAMDILYSNNVDGFCIVS 99 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 D FT L A L+ V + + S + F L L + ++ P E+ Sbjct: 100 SDSDFTKLAARLREAGMFVIGMGEKKTPTPFIS-----ACEKFKYLEVLASMASK-PAEN 153 >gi|219128570|ref|XP_002184482.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217403932|gb|EEC43881.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 401 Score = 43.6 bits (102), Expect = 0.011, Method: Composition-based stats. Identities = 21/150 (14%), Positives = 52/150 (34%), Gaps = 33/150 (22%) Query: 31 RKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCG 90 + ++ + + ++ Y ++Q + L +GF +V N Sbjct: 34 KAIVNSVSEQGRIVDRRLY--FDFSNQEQGNRW----SGLDSSGFDLV---------NTP 78 Query: 91 RKRVKSSMDVELAVDAFEQSEGLE------------HLVIFSGDGCFTTLVAALQRKVKK 138 ++ K ++D ++ D + +V+ + DG + + L+ + Sbjct: 79 QRNQKETLDKKMIADVLLFC--WDSATRNQGTNKGSCVVLVTSDGDYAYTLNKLRDRG-- 134 Query: 139 VTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 + S V+ +D L AD + L + Sbjct: 135 --VSSVVIYGHGNVADILISSADVALSLKH 162 >gi|254173701|ref|ZP_04880373.1| conserved hypothetical protein TIGR00288 [Thermococcus sp. AM4] gi|214032393|gb|EEB73223.1| conserved hypothetical protein TIGR00288 [Thermococcus sp. AM4] Length = 169 Score = 43.6 bits (102), Expect = 0.011, Method: Composition-based stats. Identities = 34/163 (20%), Positives = 64/163 (39%), Gaps = 32/163 (19%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 ++IAL IDG N+ K LG + L++ + A Q++P Sbjct: 30 KRIALLIDGPNMLR--KELGVKL--EDLVEVLSEIGDIRVAKVVL-------NQYAP-QG 77 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDG 123 L++ + GF+ + G VK LAV+A + + ++ + I + + Sbjct: 78 LIEAVSNQGFEPMI--------VSGETGVK------LAVEAMKEIYNPHIDVIAIATRNA 123 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 F ++ + K K+ ++ S L+ ADY + L Sbjct: 124 EFLPVILKAKEKGKETVVIGVEPGF----SVALKHAADYAIVL 162 >gi|254411600|ref|ZP_05025376.1| protein-glutamate methylesterase CheB [Microcoleus chthonoplastes PCC 7420] gi|196181322|gb|EDX76310.1| protein-glutamate methylesterase CheB [Microcoleus chthonoplastes PCC 7420] Length = 341 Score = 43.6 bits (102), Expect = 0.011, Method: Composition-based stats. Identities = 28/154 (18%), Positives = 50/154 (32%), Gaps = 22/154 (14%) Query: 32 KLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGR 91 +L + + + A YT +P + + NG V + ++ EN R Sbjct: 198 RLAERLAQKCQIKVAEGYTLGQLEPGLAWIAPGDYHLIIERNGTGVHLRTHQDAPENSCR 257 Query: 92 KRVKSSMDVELAVDAF--EQSEGL---EHLVIFSGDG-CFTTLVAALQRKVKKV----TI 141 AVD ++ +I +G G +++ +V Sbjct: 258 P----------AVDVLFRSVAKLYGANTLAIILTGMGQDGRLGCECIRQVGGQVWVQDEA 307 Query: 142 VSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 S V P M ++ AD + L + EI R Sbjct: 308 TSVVWGMPGMVANS--GLADRVIPLPDIAAEIIR 339 >gi|325913823|ref|ZP_08176182.1| hypothetical protein XVE_0042 [Xanthomonas vesicatoria ATCC 35937] gi|325539898|gb|EGD11535.1| hypothetical protein XVE_0042 [Xanthomonas vesicatoria ATCC 35937] Length = 277 Score = 43.6 bits (102), Expect = 0.011, Method: Composition-based stats. Identities = 28/172 (16%), Positives = 54/172 (31%), Gaps = 29/172 (16%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 +P ++IAL ID N + A D+ ++ + + + + + E Sbjct: 4 NPDKRIALLIDADN----APAGKIDVVLAEVARYGVANVRRAYGNWKSPHLKGWEAALHD 59 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 + ++F + G+ D+ + +DA + + L+ I S Sbjct: 60 Y--------------AIRPIQQFAYSSGKNAS----DMAMVIDAMDLLYARNLDGFAIVS 101 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 D FT LV L KV + F + L + Sbjct: 102 SDADFTPLVMRLLTDGMKVYGFGEKKTPAPFV-----NACSKFTYVEALGEQ 148 >gi|71066424|ref|YP_265151.1| hypothetical protein Psyc_1869 [Psychrobacter arcticus 273-4] gi|71039409|gb|AAZ19717.1| conserved hypothetical protein [Psychrobacter arcticus 273-4] Length = 335 Score = 43.6 bits (102), Expect = 0.011, Method: Composition-based stats. Identities = 30/170 (17%), Positives = 52/170 (30%), Gaps = 29/170 (17%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 +K A+ ID N + I+ +L+ I Y + L Sbjct: 1 MKKFAVLIDADN------SSHRSIEP--ILEEIAKYGIASIKRIY------GDWSIEALQ 46 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGD 122 D L N ++F K + D++L +DA + + ++ I S D Sbjct: 47 SWRDKLLPNAIT----PVQQF----AYVSQKDATDMKLVIDAMDILYAGDVDGFCIVSSD 98 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 FT L + ++ V D F+ + L E Sbjct: 99 SDFTPLASRIRESGLLV-----YGFGKKSTVKSFVNACDKFVYVENLLPE 143 >gi|145225022|ref|YP_001135700.1| hypothetical protein Mflv_4443 [Mycobacterium gilvum PYR-GCK] gi|145217508|gb|ABP46912.1| protein of unknown function DUF88 [Mycobacterium gilvum PYR-GCK] Length = 329 Score = 43.6 bits (102), Expect = 0.012, Method: Composition-based stats. Identities = 40/204 (19%), Positives = 67/204 (32%), Gaps = 45/204 (22%) Query: 7 KIALFID-------------GANLYASSKALGFD----------IDYRKLLKAFRSRAIV 43 ++A+++D G N + KA GFD +D ++ S + Sbjct: 35 RVAVYLDFDNIVLSRYDQVNGRNSFQRDKAKGFDEVRDKLDRATVDVGAIIDFASSFGTL 94 Query: 44 IRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELA 103 + Y + ++ Q+V + K+ D+ LA Sbjct: 95 VLTRAYADWSAEINARYRG-------------QLVGRAVDLVQLFPAAAYGKNGADIRLA 141 Query: 104 VDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160 VDA E L H+VI +GD + L +R + V + S M L Sbjct: 142 VDAVEDMFRLPDLTHVVIVAGDSDYIALAQRCKRLGRYVVGIGVAGSSSRM----LAAAC 197 Query: 161 DYFMDLAYLK--NEIARDPDEDKK 182 D F+ L +P D+K Sbjct: 198 DEFVTYDTLPGVPVFEPEPVADEK 221 >gi|256419852|ref|YP_003120505.1| hypothetical protein Cpin_0806 [Chitinophaga pinensis DSM 2588] gi|256034760|gb|ACU58304.1| protein of unknown function DUF88 [Chitinophaga pinensis DSM 2588] Length = 246 Score = 43.6 bits (102), Expect = 0.012, Method: Composition-based stats. Identities = 29/183 (15%), Positives = 62/183 (33%), Gaps = 29/183 (15%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M + ++A+ ID N+ + + +++++ I Y + Sbjct: 1 MENKDLRLAVLIDADNIPYN------KV--KEMMEEVAKYGIPTFKRIY------GDWTK 46 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118 L L N ++++ G+ D + +DA + + ++ + Sbjct: 47 PTLAGWKTVLLDNAIT----PIQQYSYTSGKNAT----DSAMIIDAMDILYTGRVDGFCL 98 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178 + D FT L L+ +V L + S R D F+ L L +E+ Sbjct: 99 ITSDSDFTRLATRLREAGMRV----FGLGEKKTPS-AFRAACDKFIYLEILVSEVKDASV 153 Query: 179 EDK 181 + K Sbjct: 154 KPK 156 >gi|15679895|ref|NP_277013.1| hypothetical protein MTH1913 [Methanothermobacter thermautotrophicus str. Delta H] gi|2623047|gb|AAB86373.1| conserved protein [Methanothermobacter thermautotrophicus str. Delta H] Length = 173 Score = 43.6 bits (102), Expect = 0.012, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 57/164 (34%), Gaps = 38/164 (23%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAY---YYTTVVGDPEQQFSPLH 64 I L +DG N+ L K F ++R Y VG Sbjct: 26 IGLLVDGPNM---------------LRKEFSLNLDLVRQIMSEYGNMRVGKVLLNQYASD 70 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGD 122 L++ + GF + V DV +AV+A E ++ + + + D Sbjct: 71 KLIEAIVNQGFTPIV--------------VAWDTDVYMAVEAMELIYNPNIDIIALMTRD 116 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 F ++ + K ++ ++P ++ L+ AD+ + L Sbjct: 117 ADFLPIINKAKENGKDTIVIG---AEPGFSA-ALQNSADHAIIL 156 >gi|294011667|ref|YP_003545127.1| hypothetical protein SJA_C1-16810 [Sphingobium japonicum UT26S] gi|292674997|dbj|BAI96515.1| conserved hypothetical protein [Sphingobium japonicum UT26S] Length = 244 Score = 43.6 bits (102), Expect = 0.013, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 36/90 (40%), Gaps = 7/90 (7%) Query: 82 AKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKV 139 A E + R K++ D+++ +DA + S + + S D FT LV L+++ V Sbjct: 62 AIETQQQFDLTRGKNATDMKMTIDAMDLMASGRVTGFGLMSSDSDFTPLVTRLRQEGLPV 121 Query: 140 TIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 T R F+D+ L Sbjct: 122 YGFGTDK-----TPQAFRSACTRFIDVGAL 146 >gi|146308706|ref|YP_001189171.1| hypothetical protein Pmen_3691 [Pseudomonas mendocina ymp] gi|145576907|gb|ABP86439.1| hypothetical protein Pmen_3691 [Pseudomonas mendocina ymp] Length = 272 Score = 43.6 bits (102), Expect = 0.013, Method: Composition-based stats. Identities = 18/98 (18%), Positives = 36/98 (36%), Gaps = 7/98 (7%) Query: 76 QVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQ 133 +V+ + + + + K++ D L +DA + + + + S D FT L A L+ Sbjct: 60 KVLLDHSIQPIQQFAYTKGKNATDSSLIIDAMDLLYTRRFDGFCLVSSDSDFTRLAARLR 119 Query: 134 RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 + V + S D F+ L+ Sbjct: 120 EEGLTVYGFGEEKTPSPFVS-----ACDKFIYTEILRA 152 >gi|320590086|gb|EFX02531.1| hypothetical protein CMQ_5892 [Grosmannia clavigera kw1407] Length = 261 Score = 43.6 bits (102), Expect = 0.013, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 55/179 (30%), Gaps = 30/179 (16%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 K+A+ ID N A +D LL Y + L Sbjct: 6 KLAVLIDADN------APPTKVDL--LLAEVSKYGTAHVKRAY------GDWTGQGLTKW 51 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGC 124 D L + Q ++F G+ D + +DA + + L+ I S D Sbjct: 52 KDNLLRHSIQ----PIQQFAYTQGKNAT----DSAMIIDAMDLLYTNRLDGFCIVSSDSD 103 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL-KNEIARDPDEDKK 182 FT L + ++ V + S D F+ L K+E+ P K Sbjct: 104 FTRLASRIRESGLTVFGFGEKKTPQPFVS-----ACDKFIYFEILNKDEVVHSPTATSK 157 >gi|115397957|ref|XP_001214570.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114192761|gb|EAU34461.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 885 Score = 43.6 bits (102), Expect = 0.013, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 30/93 (32%), Gaps = 11/93 (11%) Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKV 136 + ++F G+ D + +DA + + + + S D FT L A ++ Sbjct: 692 IQPVQQFAYTHGKNAT----DSAMIIDAMDLLYANRFDGFCLVSSDSDFTRLAARIRESG 747 Query: 137 KKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 V + S D F+ L Sbjct: 748 ATVYGFGVHNTPKPFVS-----ACDKFIYTENL 775 >gi|225568810|ref|ZP_03777835.1| hypothetical protein CLOHYLEM_04889 [Clostridium hylemonae DSM 15053] gi|225162309|gb|EEG74928.1| hypothetical protein CLOHYLEM_04889 [Clostridium hylemonae DSM 15053] Length = 313 Score = 43.6 bits (102), Expect = 0.013, Method: Composition-based stats. Identities = 36/167 (21%), Positives = 55/167 (32%), Gaps = 31/167 (18%) Query: 9 ALFIDGANLYASSKALGFDIDYRK-LLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 AL ID N+ S+K Y K +L + Y + + Sbjct: 7 ALLIDADNI--SAK-------YIKPILTELSKYGNITYKRIY------GDWTSTQHSKWK 51 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEH--LVIFSGDGCF 125 D L N ++F+ G+ D + +DA + + I S D F Sbjct: 52 DELLTNSIT----PIQQFSYTQGKNAT----DSAMIIDAMDILYTNDVHGFCIVSSDSDF 103 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 T LV+ L+ K V + + R+ D F L L NE Sbjct: 104 TRLVSRLRESGKLVIGMGENKTPEPF-----RKACDKFTILENLLNE 145 >gi|149913234|ref|ZP_01901768.1| hypothetical protein RAZWK3B_04560 [Roseobacter sp. AzwK-3b] gi|149813640|gb|EDM73466.1| hypothetical protein RAZWK3B_04560 [Roseobacter sp. AzwK-3b] Length = 225 Score = 43.6 bits (102), Expect = 0.013, Method: Composition-based stats. Identities = 30/159 (18%), Positives = 56/159 (35%), Gaps = 33/159 (20%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 +++ +DG N+ S K G K+L Y Q+ S Sbjct: 5 VSVLVDGDNI--SGKHAG------KILSVAAQHGEPTLVRVYA-----DAQRPS------ 45 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTT 127 DW G++++ + G + + + + L ++ + VI S DG FT Sbjct: 46 DWHSAIGYRML---------HSGTGKNAADILLALDALELLLAKNMRCFVIASSDGDFTH 96 Query: 128 LVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 L L+ KV + V + + R F+++ Sbjct: 97 LATRLREHGAKVIGIGEVKAPSAF-----RACCSDFVEI 130 >gi|330981753|gb|EGH79856.1| hypothetical protein PSYAP_24831 [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 197 Score = 43.6 bits (102), Expect = 0.013, Method: Composition-based stats. Identities = 15/73 (20%), Positives = 26/73 (35%), Gaps = 7/73 (9%) Query: 99 DVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156 D+ +AVDA + ++ + S D FT LV L+ + K+V + Sbjct: 12 DMAMAVDAMDVLFNKPVDVFCLVSSDCDFTPLVMRLRAEGKQVVGFGERKAPEPFV---- 67 Query: 157 RRQADYFMDLAYL 169 F+ Sbjct: 68 -NACSRFLYFDQY 79 >gi|118463993|ref|YP_884088.1| hypothetical protein MAV_4967 [Mycobacterium avium 104] gi|254777406|ref|ZP_05218922.1| hypothetical protein MaviaA2_22446 [Mycobacterium avium subsp. avium ATCC 25291] gi|118165280|gb|ABK66177.1| conserved hypothetical protein [Mycobacterium avium 104] Length = 237 Score = 43.6 bits (102), Expect = 0.013, Method: Composition-based stats. Identities = 31/116 (26%), Positives = 48/116 (41%), Gaps = 16/116 (13%) Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 P +D L GF V AK + + R + +EL ++EGL LV+ S DG Sbjct: 106 RPWVDALRNVGFAVFAKPKIDEDSDVDRDML---AHIEL-----RRTEGLAALVVASADG 157 Query: 124 C-FTTLVAALQRKVKKVTIVSTVLSDP-SMASDQLRRQADYFMDLAYLKNEIARDP 177 F + + R V ++ ++ASD L F+DL + R+P Sbjct: 158 QAFRQPLEEIARSGVSVAVIGFREHASWALASDTL-----DFVDLEDISGVF-REP 207 >gi|300933129|ref|ZP_07148385.1| hypothetical protein CresD4_03618 [Corynebacterium resistens DSM 45100] Length = 240 Score = 43.6 bits (102), Expect = 0.013, Method: Composition-based stats. Identities = 29/118 (24%), Positives = 46/118 (38%), Gaps = 20/118 (16%) Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG---LEHLVIFS 120 P ++ L GF V AK + TE+ +D ++ +D L+ +V+ S Sbjct: 112 RPWVEALRNVGFAVFAKP--KLTEDS-------DVDPDM-LDHIRLRHQQGTLDGVVVAS 161 Query: 121 GDG-CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 DG F + L I TVL + L +A F+DL + R+P Sbjct: 162 ADGQNFQDFLEELAE-----EIPVTVLGFQEHTTWALVSEAIEFIDLEDIPGVF-REP 213 >gi|297199039|ref|ZP_06916436.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083] gi|297147270|gb|EFH28556.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083] Length = 406 Score = 43.6 bits (102), Expect = 0.013, Method: Composition-based stats. Identities = 30/147 (20%), Positives = 59/147 (40%), Gaps = 18/147 (12%) Query: 25 GFDIDYRKLLKAFRSRAI------VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVV 78 +D+ L++ R RA ++R Y++ G P++ P H L + +V Sbjct: 29 RITVDHAALVQGLRDRAESDTERPLLRIYWF---DGAPDRVPQPEHRRLRVMP----RVT 81 Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136 ++ T + GR K +D + + E + +V+ +GDG + A + Sbjct: 82 VRLG-ALTRSDGRWAQKG-VDAAMHAELTELARNRACSDIVLVTGDGDLLPGMMAAKEHG 139 Query: 137 KKVTIVSTVLSDPS-MASDQLRRQADY 162 V + + +D S+ L +AD Sbjct: 140 VAVHLWAVQAADGDYNQSEDLVAEADE 166 >gi|57640690|ref|YP_183168.1| hypothetical protein TK0755 [Thermococcus kodakarensis KOD1] gi|57159014|dbj|BAD84944.1| hypothetical protein, conserved, DUF88 family [Thermococcus kodakarensis KOD1] Length = 165 Score = 43.2 bits (101), Expect = 0.014, Method: Composition-based stats. Identities = 33/165 (20%), Positives = 61/165 (36%), Gaps = 36/165 (21%) Query: 6 EKIALFIDGANLYASSKALGFDI-DYRKLLKAFRS-RAIVIRAYYYTTVVGDPEQQFSPL 63 ++IAL IDG N+ K LG + D + L R + Y Sbjct: 30 KRIALLIDGPNILR--KELGVKLEDIAEALSEIGDIRVAKVILNQYAP------------ 75 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSG 121 L++ + GF+ + G VK LAV+A + + ++ + + + Sbjct: 76 QGLIEAVSNQGFEPII--------VSGETGVK------LAVEAMKEIYNPHIDVIALATR 121 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 + F ++ + K K+ ++ S L+ ADY + L Sbjct: 122 NAEFLPVILKAKEKGKETVVIGVEPGF----SVALKHAADYTIIL 162 >gi|41409740|ref|NP_962576.1| hypothetical protein MAP3642c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398572|gb|AAS06192.1| hypothetical protein MAP_3642c [Mycobacterium avium subsp. paratuberculosis K-10] Length = 237 Score = 43.2 bits (101), Expect = 0.014, Method: Composition-based stats. Identities = 31/116 (26%), Positives = 48/116 (41%), Gaps = 16/116 (13%) Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 P +D L GF V AK + + R + +EL ++EGL LV+ S DG Sbjct: 106 RPWVDALRNVGFAVFAKPKIDEDSDVDRDML---AHIEL-----RRTEGLAALVVASADG 157 Query: 124 C-FTTLVAALQRKVKKVTIVSTVLSDP-SMASDQLRRQADYFMDLAYLKNEIARDP 177 F + + R V ++ ++ASD L F+DL + R+P Sbjct: 158 QAFRQPLEEIARSGVSVAVIGFREHASWALASDTL-----DFVDLEDISGVF-REP 207 >gi|302550773|ref|ZP_07303115.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM 40736] gi|302468391|gb|EFL31484.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM 40736] Length = 406 Score = 43.2 bits (101), Expect = 0.014, Method: Composition-based stats. Identities = 30/147 (20%), Positives = 59/147 (40%), Gaps = 18/147 (12%) Query: 25 GFDIDYRKLLKAFRSRAI------VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVV 78 +D+ L++ R RA ++R Y++ G P++ P H L + +V Sbjct: 32 RITVDHAALIQGLRERAESDTQQPLLRIYWF---DGAPDRVPQPEHRRLRVMP----RVT 84 Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136 ++ T + GR K +D + + E + +V+ +GDG + A + Sbjct: 85 VRLG-ALTRSDGRWAQKG-VDAAMHAELTELARNRACSDVVLVTGDGDLLPGMMAAKEHG 142 Query: 137 KKVTIVSTVLSDPS-MASDQLRRQADY 162 V + + +D S+ L +AD Sbjct: 143 VAVHLWAVQAADGDYNQSEDLVAEADE 169 >gi|289664829|ref|ZP_06486410.1| hypothetical protein XcampvN_17615 [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289671395|ref|ZP_06492470.1| hypothetical protein XcampmN_23667 [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 276 Score = 43.2 bits (101), Expect = 0.014, Method: Composition-based stats. Identities = 28/172 (16%), Positives = 54/172 (31%), Gaps = 29/172 (16%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 +P ++IAL ID N + A D+ ++ + + + + + E Sbjct: 6 NPDKRIALLIDADN----APAGKIDVVLAEVARYGVANVRRAYGNWKSPHLKGWEAALHD 61 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 + ++F + G+ D+ + +DA + + L+ I S Sbjct: 62 Y--------------AIRPIQQFAYSSGKNAS----DMAMVIDAMDLLYARNLDGFAIVS 103 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 D FT LV L KV + F + L + Sbjct: 104 SDADFTPLVMRLLTDGMKVYGFGEKKTPAPFV-----NACSKFTYVEALGEQ 150 >gi|254427448|ref|ZP_05041155.1| hypothetical protein ADG881_678 [Alcanivorax sp. DG881] gi|196193617|gb|EDX88576.1| hypothetical protein ADG881_678 [Alcanivorax sp. DG881] Length = 235 Score = 43.2 bits (101), Expect = 0.014, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 45/110 (40%), Gaps = 10/110 (9%) Query: 68 DWLHYN--GFQ-VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGD 122 DW N G++ V+ K + + + + K++ D + +DA + ++ L + S D Sbjct: 33 DWTKPNLGGWKSVLLKHSVQPIQQFAYTQGKNATDCSMIIDAMDLLYTKQLSGFCLVSSD 92 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 FT L A L+ + V + + D F+ L+++ Sbjct: 93 SDFTRLAARLREEGLTVYGFGERKTPGPFVA-----ACDKFIYTEVLRSD 137 >gi|297161308|gb|ADI11020.1| hypothetical protein SBI_07900 [Streptomyces bingchenggensis BCW-1] Length = 457 Score = 43.2 bits (101), Expect = 0.014, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 59/147 (40%), Gaps = 18/147 (12%) Query: 25 GFDIDYRKLLKAFRSRAI------VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVV 78 +D+ L++ R RA ++R Y++ G P++ P H L + +V Sbjct: 29 RISVDHATLIQGLRERAEAETERPLLRIYWF---DGAPDRVPQPEHRRLRVMP----RVT 81 Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136 ++ T + GR K +D + + E + +V+ +GDG + + + Sbjct: 82 VRLG-ALTRSDGRWAQKG-VDAAMHAELTELARNRACSDIVLVTGDGDLLPGLMSAKEHG 139 Query: 137 KKVTIVSTVLSDPS-MASDQLRRQADY 162 V + + +D S+ L +AD Sbjct: 140 VAVHLWAVQAADGDYNQSEDLVAEADE 166 >gi|302518506|ref|ZP_07270848.1| conserved hypothetical protein [Streptomyces sp. SPB78] gi|302427401|gb|EFK99216.1| conserved hypothetical protein [Streptomyces sp. SPB78] Length = 457 Score = 43.2 bits (101), Expect = 0.015, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 58/147 (39%), Gaps = 18/147 (12%) Query: 25 GFDIDYRKLLKAFRSRAI------VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVV 78 +D+ L++ R RA ++R Y++ G P++ P H L +V Sbjct: 163 RITVDHAALIQRLRERAEEETGQPLLRIYWF---DGAPDRVPQPEHRRLRVRP----RVT 215 Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136 ++ T + GR K +D + + E + +V+ +GDG + + + Sbjct: 216 VRLG-ALTRSDGRWAQKG-VDAAMHAELTELARNRACSDIVLVTGDGDLLPGLVSAKEHG 273 Query: 137 KKVTIVSTVLSDPS-MASDQLRRQADY 162 V + + +D S+ L +AD Sbjct: 274 VAVHLWAVQAADGDYNQSEDLVAEADE 300 >gi|320011309|gb|ADW06159.1| hypothetical protein Sfla_4758 [Streptomyces flavogriseus ATCC 33331] Length = 417 Score = 43.2 bits (101), Expect = 0.015, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 59/147 (40%), Gaps = 18/147 (12%) Query: 25 GFDIDYRKLLKAFRSRAI------VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVV 78 +D+ L++ R RA ++R Y++ G P++ P H L + +V Sbjct: 29 RITVDHTALIQGLRERAEADTEQPLLRIYWF---DGAPDRVPQPEHRRLRVMP----RVT 81 Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136 ++ T + GR K +D + + E + +V+ +GDG + + + Sbjct: 82 VRLG-ALTRSDGRWAQKG-VDAAMHAELTELARNRACSDVVLVTGDGDLLPGLMSAKEHG 139 Query: 137 KKVTIVSTVLSDPS-MASDQLRRQADY 162 V + + +D S+ L +AD Sbjct: 140 VAVHLWAVQAADGDYNQSEDLVAEADE 166 >gi|291450828|ref|ZP_06590218.1| conserved hypothetical protein [Streptomyces albus J1074] gi|291353777|gb|EFE80679.1| conserved hypothetical protein [Streptomyces albus J1074] Length = 403 Score = 43.2 bits (101), Expect = 0.015, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 58/147 (39%), Gaps = 18/147 (12%) Query: 25 GFDIDYRKLLKAFRSRAI------VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVV 78 +D+ L++ R RA ++R Y++ G P++ P H L + +V Sbjct: 23 RISVDHATLVRQLRERAEAETAQPLLRIYWF---DGAPDRVPQPEHRRLRVMP----RVT 75 Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136 ++ T + GR K +D + + E + +V+ +GDG + A + Sbjct: 76 VRLG-ALTRSDGRWAQKG-VDAAMHAELTELARNKACSDIVLVTGDGDLLPGMTAAKEHG 133 Query: 137 KKVTIVSTVLSDPS-MASDQLRRQADY 162 V + + + S+ L +AD Sbjct: 134 VAVHLWAVQAAGGDYNQSEDLVAEADE 160 >gi|84625703|ref|YP_453075.1| hypothetical protein XOO_4046 [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|84369643|dbj|BAE70801.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 276 Score = 43.2 bits (101), Expect = 0.015, Method: Composition-based stats. Identities = 31/172 (18%), Positives = 50/172 (29%), Gaps = 29/172 (16%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 +P ++IAL ID N A ID ++ Y Sbjct: 6 NPDKRIALLIDADN------APAGKID-----------VVLAEVARYGVANVRRAYGNWK 48 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 L W + ++F + G+ D+ + +DA + + L+ I S Sbjct: 49 SPHLKRWEAAL-HDYAIRPIQQFAYSSGKNAS----DMAMVIDAMDLLYARNLDGFAIVS 103 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 D FT LV L KV + F + L + Sbjct: 104 SDADFTPLVMRLLTDGMKVYGFGEKKTPAPFV-----NACSKFTYVEALGQQ 150 >gi|239931834|ref|ZP_04688787.1| hypothetical protein SghaA1_26677 [Streptomyces ghanaensis ATCC 14672] gi|291440202|ref|ZP_06579592.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] gi|291343097|gb|EFE70053.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] Length = 403 Score = 43.2 bits (101), Expect = 0.015, Method: Composition-based stats. Identities = 30/147 (20%), Positives = 59/147 (40%), Gaps = 18/147 (12%) Query: 25 GFDIDYRKLLKAFRSRAI------VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVV 78 +D+ L++ R RA ++R Y++ G P++ P H L + +V Sbjct: 29 RITVDHAALIQGLRERAESDTRQPLLRIYWF---DGAPDRVPQPEHRRLRVMP----RVT 81 Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136 ++ T + GR K +D + + E + +V+ +GDG + A + Sbjct: 82 VRLG-ALTRSDGRWAQKG-VDAAMHAELTELARNRACSDIVLVTGDGDLLPGMMAAKEHG 139 Query: 137 KKVTIVSTVLSDPS-MASDQLRRQADY 162 V + + +D S+ L +AD Sbjct: 140 VAVHLWAVQAADGDYNQSEDLVAEADE 166 >gi|304437583|ref|ZP_07397538.1| conserved hypothetical protein [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304369396|gb|EFM23066.1| conserved hypothetical protein [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 227 Score = 43.2 bits (101), Expect = 0.016, Method: Composition-based stats. Identities = 17/88 (19%), Positives = 35/88 (39%), Gaps = 6/88 (6%) Query: 51 TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110 + D + QF + L + QV KE + K +D+++ +D + Sbjct: 103 GKLADEQAQFLLREDITRKLCRSALQVT--DLKE-QDFLLDVSQKG-VDMKIGLDIASLA 158 Query: 111 --EGLEHLVIFSGDGCFTTLVAALQRKV 136 + ++ +V+ SGD F +R+ Sbjct: 159 YKQQVDQIVLISGDSDFVPAAKLARREG 186 >gi|239978948|ref|ZP_04701472.1| hypothetical protein SalbJ_05917 [Streptomyces albus J1074] Length = 409 Score = 43.2 bits (101), Expect = 0.016, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 58/147 (39%), Gaps = 18/147 (12%) Query: 25 GFDIDYRKLLKAFRSRAI------VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVV 78 +D+ L++ R RA ++R Y++ G P++ P H L + +V Sbjct: 29 RISVDHATLVRQLRERAEAETAQPLLRIYWF---DGAPDRVPQPEHRRLRVMP----RVT 81 Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136 ++ T + GR K +D + + E + +V+ +GDG + A + Sbjct: 82 VRLG-ALTRSDGRWAQKG-VDAAMHAELTELARNKACSDIVLVTGDGDLLPGMTAAKEHG 139 Query: 137 KKVTIVSTVLSDPS-MASDQLRRQADY 162 V + + + S+ L +AD Sbjct: 140 VAVHLWAVQAAGGDYNQSEDLVAEADE 166 >gi|302546171|ref|ZP_07298513.1| conserved hypothetical protein [Streptomyces hygroscopicus ATCC 53653] gi|302463789|gb|EFL26882.1| conserved hypothetical protein [Streptomyces himastatinicus ATCC 53653] Length = 435 Score = 43.2 bits (101), Expect = 0.017, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 59/147 (40%), Gaps = 18/147 (12%) Query: 25 GFDIDYRKLLKAFRSRAI------VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVV 78 +D+ L++ R RA ++R Y++ G P++ P H L + +V Sbjct: 29 RISVDHATLIQGLRERAEAETERPLLRIYWF---DGAPDRVPQPEHRRLRVMP----RVT 81 Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136 ++ T + GR K +D + + E + +V+ +GDG + + + Sbjct: 82 VRLG-ALTRSDGRWAQKG-VDAAMHAELTELARNRACSDIVLVTGDGDLLPGLMSAKEHG 139 Query: 137 KKVTIVSTVLSDPS-MASDQLRRQADY 162 V + + +D S+ L +AD Sbjct: 140 VAVHLWAVQAADGDYNQSEDLVAEADE 166 >gi|260574190|ref|ZP_05842195.1| protein of unknown function DUF88 [Rhodobacter sp. SW2] gi|259023656|gb|EEW26947.1| protein of unknown function DUF88 [Rhodobacter sp. SW2] Length = 252 Score = 43.2 bits (101), Expect = 0.017, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 32/87 (36%), Gaps = 8/87 (9%) Query: 99 DVELAVDAF--EQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156 D+ L + A S + V+ S D FT L A ++ + V + + Sbjct: 78 DIGLVISAMDFLHSGLFDAFVLVSSDSDFTRLAARIREQGLDVYGIGEKK-----TPEAF 132 Query: 157 RRQADYFMDLAYL-KNEIARDPDEDKK 182 R F+ + L E AR+ ++ Sbjct: 133 RMACKRFIYVENLGAEEPAREAPRPER 159 >gi|120402029|ref|YP_951858.1| hypothetical protein Mvan_1014 [Mycobacterium vanbaalenii PYR-1] gi|119954847|gb|ABM11852.1| protein of unknown function DUF88 [Mycobacterium vanbaalenii PYR-1] Length = 299 Score = 43.2 bits (101), Expect = 0.017, Method: Composition-based stats. Identities = 22/75 (29%), Positives = 30/75 (40%), Gaps = 7/75 (9%) Query: 93 RVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDP 149 K+ D+ LAVDA E L H+VI GD + L +R + V + S Sbjct: 104 YGKNGADIRLAVDAVEDMFRLPDLTHVVIVGGDSDYIALAQRCKRLGRYVVGIGVAGSSS 163 Query: 150 SMASDQLRRQADYFM 164 M L D F+ Sbjct: 164 RM----LAAACDEFV 174 >gi|67924850|ref|ZP_00518246.1| hypothetical protein CwatDRAFT_1822 [Crocosphaera watsonii WH 8501] gi|67853309|gb|EAM48672.1| hypothetical protein CwatDRAFT_1822 [Crocosphaera watsonii WH 8501] Length = 235 Score = 43.2 bits (101), Expect = 0.017, Method: Composition-based stats. Identities = 26/182 (14%), Positives = 55/182 (30%), Gaps = 31/182 (17%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 ++A+ ID N+ A+ LL+ A Q + Sbjct: 8 SSNTRLAVLIDAENVSANI--------IEHLLQEVAKYG---TANVKRIYGDWTNSQLNS 56 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 L+ L + ++F G+ D L +DA + + + + S Sbjct: 57 WKSKLNKLA-------LQPIQQFRYTTGKNAT----DSALIIDAMDLLYTNNFDGFCLVS 105 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 D FT L + ++ ++ + + + F+ L + P + Sbjct: 106 SDSDFTRLASRIRESG----LIVYGFGEKVKTPEAFVVACNKFIYTDILAY---KQPSGN 158 Query: 181 KK 182 +K Sbjct: 159 QK 160 >gi|315446769|ref|YP_004079648.1| hypothetical protein Mspyr1_52890 [Mycobacterium sp. Spyr1] gi|315265072|gb|ADU01814.1| Protein of unknown function DUF88 [Mycobacterium sp. Spyr1] Length = 171 Score = 43.2 bits (101), Expect = 0.017, Method: Composition-based stats. Identities = 13/36 (36%), Positives = 21/36 (58%) Query: 108 EQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVS 143 ++ +V+ SGDG FT +AAL + K T+V+ Sbjct: 99 NIADRFTEVVLVSGDGIFTHAIAALASRGVKTTVVA 134 >gi|291550583|emb|CBL26845.1| Uncharacterized conserved protein [Ruminococcus torques L2-14] Length = 339 Score = 43.2 bits (101), Expect = 0.017, Method: Composition-based stats. Identities = 43/179 (24%), Positives = 68/179 (37%), Gaps = 29/179 (16%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRK-LLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 ++ AL ID N+ S+K Y K +L V Y + GD + S Sbjct: 3 DRFALLIDADNV--SAK-------YIKPILDELSKYGNVT----YKRIYGDWTKSNSA-- 47 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 + L N ++F+ G+ S+M ++ A+D SE LE + S D Sbjct: 48 SWKEELLQNSIT----PIQQFSYTQGKNSTDSAMIID-AMDMLYTSE-LEGFCLVSSDSD 101 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE--IARDPDEDK 181 FT L + L+ K V + + R+ D F L L + I ++ E K Sbjct: 102 FTKLASRLRESGKMVIGMGEDKTPLPF-----RKACDIFTVLEVLLEDNTIEKEESEGK 155 >gi|254785235|ref|YP_003072663.1| tryptophan halogenase PrnA [Teredinibacter turnerae T7901] gi|237686769|gb|ACR14033.1| tryptophan halogenase PrnA [Teredinibacter turnerae T7901] Length = 500 Score = 43.2 bits (101), Expect = 0.017, Method: Composition-based stats. Identities = 33/129 (25%), Positives = 53/129 (41%), Gaps = 15/129 (11%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 + P I + IDG N +A + D ++ + S + YY+ PE S Sbjct: 96 WHPFGNIGVDIDGHNFFAFLQKARKQGDPAQMWQYAPSAVLGEAGRYYSPGAATPE---S 152 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIF 119 L + LH++ +V AK K F+E G + V +E VDA + ++ L + Sbjct: 153 FLSGVNYALHFDAVKV-AKYLKRFSEALGIQHV-----METVVDA-SLHDNGFIDSLTLK 205 Query: 120 SG---DGCF 125 G G F Sbjct: 206 DGRRLAGDF 214 >gi|150389764|ref|YP_001319813.1| hypothetical protein Amet_1991 [Alkaliphilus metalliredigens QYMF] gi|149949626|gb|ABR48154.1| conserved hypothetical protein [Alkaliphilus metalliredigens QYMF] Length = 250 Score = 43.2 bits (101), Expect = 0.017, Method: Composition-based stats. Identities = 32/171 (18%), Positives = 55/171 (32%), Gaps = 29/171 (16%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 + +KIA+ ID N+ S K + F D + Y Q S Sbjct: 2 ENDKKIAVLIDADNV--SGKYIKFIFD------EISNHGTPTFKRIY---GDWTNPQLSS 50 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 +L + + ++++ G+ D L +DA + S ++ I S Sbjct: 51 WKSVL-----LNYSIT--PIQQYSYTTGKNAT----DAALIIDAMDILYSNNVDGFCIVS 99 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 D FT L A L+ V + + + + F L L Sbjct: 100 SDSDFTRLAARLREAGMYVIGMGEKKTPAPFIA-----ACEKFKYLEVLAA 145 >gi|188574761|ref|YP_001911690.1| hypothetical protein PXO_03707 [Xanthomonas oryzae pv. oryzae PXO99A] gi|188519213|gb|ACD57158.1| protein of unknown function [Xanthomonas oryzae pv. oryzae PXO99A] Length = 276 Score = 43.2 bits (101), Expect = 0.017, Method: Composition-based stats. Identities = 31/172 (18%), Positives = 50/172 (29%), Gaps = 29/172 (16%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 +P ++IAL ID N A ID ++ Y Sbjct: 6 NPDKRIALLIDADN------APAGKID-----------VVLAEVARYGVANVRRAYGNWK 48 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 L W + ++F + G+ D+ + +DA + + L+ I S Sbjct: 49 SPHLKRWEAAL-HDYAIRPIQQFAYSSGKNAS----DMAMVIDAMDLLYARNLDGFAIVS 103 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 D FT LV L KV + F + L + Sbjct: 104 SDADFTPLVMRLLTDGMKVYGFGEKKTPAPFV-----NACSKFTYVEALGQQ 150 >gi|120612954|ref|YP_972632.1| hypothetical protein Aave_4318 [Acidovorax citrulli AAC00-1] gi|120591418|gb|ABM34858.1| protein of unknown function DUF88 [Acidovorax citrulli AAC00-1] Length = 298 Score = 43.2 bits (101), Expect = 0.017, Method: Composition-based stats. Identities = 17/89 (19%), Positives = 30/89 (33%), Gaps = 13/89 (14%) Query: 79 AKVAKEFTENCGRKRVKSSM-DVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRK 135 + ++F + + D+ + VDA E ++ + I S D FT LV L+ K Sbjct: 68 VRPIQQF-----DYSRRKNATDMAMTVDAMELLYTDRPDAFGIVSSDADFTPLVMHLRAK 122 Query: 136 VKKVTIVSTVLSDPSMASDQLRRQADYFM 164 V + F+ Sbjct: 123 GAAVYGFGAQQTPRPFV-----NACSRFL 146 >gi|189347523|ref|YP_001944052.1| hypothetical protein Clim_2044 [Chlorobium limicola DSM 245] gi|189341670|gb|ACD91073.1| conserved hypothetical protein [Chlorobium limicola DSM 245] Length = 249 Score = 43.2 bits (101), Expect = 0.017, Method: Composition-based stats. Identities = 18/100 (18%), Positives = 39/100 (39%), Gaps = 7/100 (7%) Query: 76 QVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQ 133 +++ + + + + G + K++ D + +DA + + + I S D FT L + L+ Sbjct: 55 ELLLQHSIQPIQQFGYTKGKNATDSAMIIDAMDLLYTGKFDGFCIVSSDSDFTKLASRLR 114 Query: 134 RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 V + S D F+ L+ +I Sbjct: 115 ESGLTVYGFGEKKTPSPFVS-----ACDKFIYTELLRAKI 149 >gi|163783250|ref|ZP_02178244.1| hypothetical protein HG1285_14539 [Hydrogenivirga sp. 128-5-R1-1] gi|159881584|gb|EDP75094.1| hypothetical protein HG1285_14539 [Hydrogenivirga sp. 128-5-R1-1] Length = 205 Score = 43.2 bits (101), Expect = 0.018, Method: Composition-based stats. Identities = 33/207 (15%), Positives = 71/207 (34%), Gaps = 39/207 (18%) Query: 5 REKIALFIDGANLYASSKALGFDI----------DYRKLL----KAFRSRAIVIRAYYYT 50 +K+A+ +D NL + + D KLL V R ++Y Sbjct: 1 MKKVAILVDWENLRKTLERAFKKFRISPDKFSYNDVDKLLLFIMSLLEEDEEVYRIFFYV 60 Query: 51 TVVG------------DPEQQFSPLHP----LLDWLHYNGFQVVAK---VAKEFTENCGR 91 + D ++++ ++ L+ L + K + + Sbjct: 61 SEPPKEARWRSATYSIDMDEKYRKIYENAVTFLESLKTKDLVSIRKGKLEFRGYNSQNKP 120 Query: 92 KRVKSSMDVELAVDA--FEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDP 149 + +D+ + +D ++ +++FS D + + +V I+ T Sbjct: 121 LFTQKQVDMLIGLDMAHLSYLRLVDRVMVFSLDKDLIPALKIARVNGLQV-IIPTYKGLR 179 Query: 150 SMASDQLRRQAD--YFMDLAYLKNEIA 174 AS +L+ AD ++DLA I+ Sbjct: 180 Q-ASPELQEHADFIRYVDLAERLRNIS 205 >gi|315445391|ref|YP_004078270.1| hypothetical protein Mspyr1_38410 [Mycobacterium sp. Spyr1] gi|315263694|gb|ADU00436.1| uncharacterized conserved protein [Mycobacterium sp. Spyr1] Length = 302 Score = 42.8 bits (100), Expect = 0.018, Method: Composition-based stats. Identities = 26/95 (27%), Positives = 37/95 (38%), Gaps = 9/95 (9%) Query: 93 RVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDP 149 K+ D+ LAVDA E L H+VI +GD + L +R + V + S Sbjct: 104 YGKNGADIRLAVDAVEDMFRLPDLTHVVIVAGDSDYIALAQRCKRLGRYVVGIGVAGSSS 163 Query: 150 SMASDQLRRQADYFMDLAYLK--NEIARDPDEDKK 182 M L D F+ L +P D+K Sbjct: 164 RM----LAAACDEFVTYDTLPGVPVFEPEPVADEK 194 >gi|254382567|ref|ZP_04997925.1| conserved hypothetical protein [Streptomyces sp. Mg1] gi|194341470|gb|EDX22436.1| conserved hypothetical protein [Streptomyces sp. Mg1] Length = 431 Score = 42.8 bits (100), Expect = 0.018, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 59/147 (40%), Gaps = 18/147 (12%) Query: 25 GFDIDYRKLLKAFRSRAI------VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVV 78 +D+ L++ R RA ++R Y++ G P++ P H L + +V Sbjct: 29 RITVDHAALIQGLRERAEADTEQPLLRIYWF---DGAPDRVPQPEHRRLRVMP----RVT 81 Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136 ++ T + GR K +D + + E + +V+ +GDG + + + Sbjct: 82 VRLG-ALTRSDGRWAQKG-VDAAMHAELTELARNRACSDVVLVTGDGDLLPGLMSAKEHG 139 Query: 137 KKVTIVSTVLSDPS-MASDQLRRQADY 162 V + + +D S+ L +AD Sbjct: 140 VAVHLWAVQAADGDYNQSEDLVAEADE 166 >gi|322836790|ref|YP_004210704.1| hypothetical protein AciX9_4647 [Acidobacterium sp. MP5ACTX9] gi|321165877|gb|ADW71577.1| hypothetical protein AciX9_4647 [Acidobacterium sp. MP5ACTX9] Length = 213 Score = 42.8 bits (100), Expect = 0.019, Method: Composition-based stats. Identities = 23/155 (14%), Positives = 50/155 (32%), Gaps = 22/155 (14%) Query: 6 EKIALFIDGANLYA-SSKALGFD-IDYRKLLKAFRSRA-IVIRAYYYTTVVGDPEQQFSP 62 ++ +++DG NLY + + F ++ L+++ ++ Y+T V P Sbjct: 5 KRTYVYVDGFNLYYRTLRKTKFKWLNLEALVRSLLDDENEIVCIRYFTAPVSGKFDPGVP 64 Query: 63 --LHPLLDWLHYNG----------FQVVAKVAKEFTENCGRK-----RVKSSMDVELAVD 105 L L + + + + DV LA Sbjct: 65 VRQQRYLQALRTLPTVSIHEGNFLTRAKIRPLVHPAPDGPTHVEIWNTEEKGSDVNLATY 124 Query: 106 AFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKK 138 + + + V+ S D V ++ ++KK Sbjct: 125 LIHDAWRDLFDVAVVLSQDTDLNEPVRIVRDEIKK 159 >gi|294494973|ref|YP_003541466.1| hypothetical protein Mmah_0289 [Methanohalophilus mahii DSM 5219] gi|292665972|gb|ADE35821.1| protein of unknown function DUF88 [Methanohalophilus mahii DSM 5219] Length = 258 Score = 42.8 bits (100), Expect = 0.019, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 31/76 (40%), Gaps = 7/76 (9%) Query: 99 DVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156 D L +DA + SE L+ I S D FT L + ++ +KV + + + Sbjct: 79 DSSLIIDAMDLLYSEPLDGFCIVSSDSDFTRLSSRIRESGRKVYGFGELKTPKPFIA--- 135 Query: 157 RRQADYFMDLAYLKNE 172 D F+ L+ E Sbjct: 136 --ACDKFIYTENLRKE 149 >gi|118618529|ref|YP_906861.1| hypothetical protein MUL_3170 [Mycobacterium ulcerans Agy99] gi|118570639|gb|ABL05390.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99] Length = 288 Score = 42.8 bits (100), Expect = 0.019, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 57/182 (31%), Gaps = 41/182 (22%) Query: 7 KIALFID-------------GANLYASSKALGFD--------IDYRKLLKAFRSRAIVIR 45 ++A++ D G N + K+ G + +D ++ S ++ Sbjct: 8 RVAVYFDFDNIVISRYEQVHGRNTFHRDKSKGLEQERLQLATVDLGAIIDFASSFGTLVL 67 Query: 46 AYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVD 105 Y D + Q+V + K+ ++ LAVD Sbjct: 68 TRAYADWSADVNAGYHG-------------QLVGRAVDLVQLFPAASYGKNGANIRLAVD 114 Query: 106 AFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADY 162 A E L H+VI GD + L +R + V + +S L D Sbjct: 115 AVEDMFRLPDLTHVVIVGGDSDYIALAQRCKRLGRYV----VGIGVAGASSGSLAAACDE 170 Query: 163 FM 164 F+ Sbjct: 171 FV 172 >gi|294056251|ref|YP_003549909.1| protein of unknown function DUF88 [Coraliomargarita akajimensis DSM 45221] gi|293615584|gb|ADE55739.1| protein of unknown function DUF88 [Coraliomargarita akajimensis DSM 45221] Length = 253 Score = 42.8 bits (100), Expect = 0.019, Method: Composition-based stats. Identities = 30/170 (17%), Positives = 59/170 (34%), Gaps = 31/170 (18%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M E IAL ID N A+ ID+ ++ S V Y Sbjct: 1 MPQTNESIALLIDADNAPAA------KIDF--IISELASYGTVNIRRAYGNWKKA----- 47 Query: 61 SPLHPLLDWLHYNGF-QVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLV 117 +G+ +V+ + + + + + K++ D+ L +DA + ++ ++ Sbjct: 48 ----------GLSGWEKVLHEHSIQPVQLFDLTKGKNATDMALLIDAMDILYTKEVQTFC 97 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 + + D FT L L+ K+V + + +F L Sbjct: 98 LVTSDCDFTPLCQRLRADGKRVLGFGSKTAPAPFV-----NSCSHFHYLD 142 >gi|254822116|ref|ZP_05227117.1| hypothetical protein MintA_19432 [Mycobacterium intracellulare ATCC 13950] Length = 240 Score = 42.8 bits (100), Expect = 0.019, Method: Composition-based stats. Identities = 31/116 (26%), Positives = 48/116 (41%), Gaps = 16/116 (13%) Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 P +D L GF V AK + + R + +EL ++EGL LV+ S DG Sbjct: 109 RPWVDALRNVGFAVFAKPKIDEDSDVDRDML---AHIEL-----RRTEGLAALVVASADG 160 Query: 124 C-FTTLVAALQRKVKKVTIVSTVLSDP-SMASDQLRRQADYFMDLAYLKNEIARDP 177 F + + R V ++ ++ASD L F+DL + R+P Sbjct: 161 QAFRQPLEEIARSGTSVQVIGFREHASWALASDTL-----DFVDLEEIAGVF-REP 210 >gi|242398823|ref|YP_002994247.1| hypothetical protein TSIB_0837 [Thermococcus sibiricus MM 739] gi|242265216|gb|ACS89898.1| hypothetical protein TSIB_0837 [Thermococcus sibiricus MM 739] Length = 174 Score = 42.8 bits (100), Expect = 0.019, Method: Composition-based stats. Identities = 34/163 (20%), Positives = 59/163 (36%), Gaps = 32/163 (19%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 P + I L IDG N+ F I + +A + A Q++P Sbjct: 28 PPKTIGLIIDGPNI----LRKEFGIKLENIKEALEKIGNIRVAKVVL-------NQYAP- 75 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVI--FSG 121 L++ + GF+ + V DV +A++A E + VI + Sbjct: 76 QGLIEAVVNQGFEPII--------------VAGDTDVRIAIEAMELIYNSDIEVIGFATR 121 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 D F ++ +RK K+ ++ S L+ ADY + Sbjct: 122 DADFLPIINEGKRKGKETVVIGVEPGF----SVALQNAADYVI 160 >gi|300859364|ref|YP_003784347.1| hypothetical protein cpfrc_01947 [Corynebacterium pseudotuberculosis FRC41] gi|300686818|gb|ADK29740.1| hypothetical protein cpfrc_01947 [Corynebacterium pseudotuberculosis FRC41] gi|302207047|gb|ADL11389.1| Conserved hypothetical protein [Corynebacterium pseudotuberculosis C231] gi|302331607|gb|ADL21801.1| Conserved hypothetical protein [Corynebacterium pseudotuberculosis 1002] gi|308277300|gb|ADO27199.1| Conserved hypothetical protein [Corynebacterium pseudotuberculosis I19] Length = 219 Score = 42.8 bits (100), Expect = 0.019, Method: Composition-based stats. Identities = 27/117 (23%), Positives = 47/117 (40%), Gaps = 17/117 (14%) Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELA--VDAFEQSEGLEHLVIFSG 121 P ++ L GF V AK + ++ +D ++ + Q+ L+ LV+ S Sbjct: 88 RPWVEALRNIGFAVFAKP---------KLSEETDVDPDMLAHIRLRHQAGKLKGLVVASA 138 Query: 122 DG-CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 DG F + L + VT++ +D+ A F+DL + RDP Sbjct: 139 DGQNFKDTLDELAAEGVAVTVLGFHEHASWAVADE----ALTFVDLEEVPGVF-RDP 190 >gi|218245522|ref|YP_002370893.1| hypothetical protein PCC8801_0650 [Cyanothece sp. PCC 8801] gi|257058559|ref|YP_003136447.1| hypothetical protein Cyan8802_0670 [Cyanothece sp. PCC 8802] gi|218166000|gb|ACK64737.1| protein of unknown function DUF88 [Cyanothece sp. PCC 8801] gi|256588725|gb|ACU99611.1| protein of unknown function DUF88 [Cyanothece sp. PCC 8802] Length = 234 Score = 42.8 bits (100), Expect = 0.019, Method: Composition-based stats. Identities = 27/173 (15%), Positives = 53/173 (30%), Gaps = 28/173 (16%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 +++A+ ID N+ AS LL+ A Q + Sbjct: 6 LSSNKRLAVLIDADNVSASV--------IEALLQEIAKYG---TANVKRIYGDWTSNQLN 54 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIF 119 L+ K A + + K+S D L +DA + + + + Sbjct: 55 SWKNQLN-----------KFAIQPMQQFKYTMGKNSTDSALIIDAMDLLYTGNFDGFCLV 103 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 S D FT L + ++ ++ + + F+ L+N+ Sbjct: 104 SSDSDFTRLASRIRESG----LIVYGFGEKQKTPSAFVVACNKFIYTDILENQ 152 >gi|145241746|ref|XP_001393519.1| hypothetical protein ANI_1_1160084 [Aspergillus niger CBS 513.88] gi|134078059|emb|CAK40142.1| unnamed protein product [Aspergillus niger] Length = 253 Score = 42.8 bits (100), Expect = 0.019, Method: Composition-based stats. Identities = 28/169 (16%), Positives = 44/169 (26%), Gaps = 29/169 (17%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 D K A+ ID N S LL Y Sbjct: 4 DSVPKFAVLIDADNAAYSVIHP--------LLAEIARYGTAHAKRAY---------GDWS 46 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 L W + + E + K+S D + +DA + + + + S Sbjct: 47 SPNLTRWKDQL-----LQHSIEPIQQFAYTYGKNSTDSAMIIDAMDLLYTRRYDGFCLVS 101 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 D FT L A ++ V + + D F+ L Sbjct: 102 SDSDFTRLAARIRESGLVVYGFGEQKTPKPFVA-----ACDKFIYTENL 145 >gi|302533928|ref|ZP_07286270.1| conserved hypothetical protein [Streptomyces sp. C] gi|302442823|gb|EFL14639.1| conserved hypothetical protein [Streptomyces sp. C] Length = 425 Score = 42.8 bits (100), Expect = 0.020, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 59/147 (40%), Gaps = 18/147 (12%) Query: 25 GFDIDYRKLLKAFRSRAI------VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVV 78 +D+ L++ R RA ++R Y++ G P++ P H L + +V Sbjct: 29 RITVDHSALIQGLRERAEADTQQPLLRIYWF---DGAPDRVPQPEHRRLRVMP----RVT 81 Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136 ++ T + GR K +D + + E + +V+ +GDG + + + Sbjct: 82 VRLG-ALTRSDGRWAQKG-VDAAMHAELTELARNRACSDVVLVTGDGDLLPGLMSAKEHG 139 Query: 137 KKVTIVSTVLSDPS-MASDQLRRQADY 162 V + + +D S+ L +AD Sbjct: 140 VAVHLWAVQAADGDYNQSEDLVAEADE 166 >gi|237808074|ref|YP_002892514.1| hypothetical protein Tola_1311 [Tolumonas auensis DSM 9187] gi|237500335|gb|ACQ92928.1| protein of unknown function DUF88 [Tolumonas auensis DSM 9187] Length = 239 Score = 42.8 bits (100), Expect = 0.020, Method: Composition-based stats. Identities = 34/181 (18%), Positives = 58/181 (32%), Gaps = 32/181 (17%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 EKIALFID N + A D+ +L +V Y + Sbjct: 2 QSNEKIALFIDADN----APAARIDM----VLSELARYGVVNIRKAY------GNWKNPT 47 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAF--EQSEGLEHLVIFS 120 L D L + + ++F G+ D+ L +D ++ ++ + + S Sbjct: 48 LKSWEDVL----HEYAIQPIQQFDLTKGKNAT----DMALVIDVMDVLYTKKVDIICLVS 99 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE---IARDP 177 D FT LV K V + + F+ L + +A+ P Sbjct: 100 SDCDFTPLVTRTLSDGKFVIGFGERKAPVAFV-----NSCSRFLFLDQQVEQNITVAKPP 154 Query: 178 D 178 Sbjct: 155 R 155 >gi|212224115|ref|YP_002307351.1| hypothetical protein TON_0966 [Thermococcus onnurineus NA1] gi|212009072|gb|ACJ16454.1| hypothetical protein, conserved [Thermococcus onnurineus NA1] Length = 170 Score = 42.8 bits (100), Expect = 0.021, Method: Composition-based stats. Identities = 35/166 (21%), Positives = 61/166 (36%), Gaps = 36/166 (21%) Query: 6 EKIALFIDGANLYASSKALGFDI-DYRKLLKAFRS-RAIVIRAYYYTTVVGDPEQQFSPL 63 +KIAL IDG N+ K G + D +L+ R + Y Sbjct: 31 KKIALLIDGPNILR--KEFGVKLEDIVDVLEDIGDLRVAKVILNQYAP------------ 76 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSG 121 L++ + GF+VV G VK LAV+A + ++ + + + Sbjct: 77 QGLIEAVSNQGFEVVV--------VSGETGVK------LAVEAMREIYNPNIDVIALATR 122 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 + F ++ + K K+ ++ S L+ ADY + L Sbjct: 123 NAEFLPVILKAKEKGKETIVIGIEPGF----SAALKHAADYTIILT 164 >gi|87303496|ref|ZP_01086279.1| hypothetical protein WH5701_09555 [Synechococcus sp. WH 5701] gi|87281909|gb|EAQ73872.1| hypothetical protein WH5701_09555 [Synechococcus sp. WH 5701] Length = 132 Score = 42.8 bits (100), Expect = 0.021, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 29/78 (37%), Gaps = 7/78 (8%) Query: 99 DVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156 +V L +DA + S ++ + S D T L A ++ V + + Sbjct: 18 EVALIIDAMDLLHSGRVDGFWLVSSDNDVTRLAARIRAAGLAVYAFGEKKTPKPFVA--- 74 Query: 157 RRQADYFMDLAYLKNEIA 174 D F+D L+ ++ Sbjct: 75 --ACDKFIDTEILRKALS 90 >gi|239623453|ref|ZP_04666484.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239521484|gb|EEQ61350.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 308 Score = 42.8 bits (100), Expect = 0.022, Method: Composition-based stats. Identities = 31/171 (18%), Positives = 56/171 (32%), Gaps = 29/171 (16%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M + A+ ID N+ S K + + +L + I Y ++ Sbjct: 1 MEQSERRFAVLIDADNV--SPKYIKY------ILDEVSDQGIATYKRIY--GDWTDNEKR 50 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118 S + LLDW ++++ G+ D + +DA + S ++ + Sbjct: 51 SWKNVLLDW--------SVNPIQQYSYTTGKNAT----DSAMIIDAMDILYSGNVDGFCL 98 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 S D FT L L+ V + + R D F L + Sbjct: 99 VSSDSDFTKLAQRLREAGMFVMGIGEQKTPKPF-----RAACDTFKLLEII 144 >gi|307292778|ref|ZP_07572624.1| hypothetical protein SphchDRAFT_0251 [Sphingobium chlorophenolicum L-1] gi|306880844|gb|EFN12060.1| hypothetical protein SphchDRAFT_0251 [Sphingobium chlorophenolicum L-1] Length = 246 Score = 42.8 bits (100), Expect = 0.022, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 29/73 (39%), Gaps = 7/73 (9%) Query: 99 DVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156 D+++ +DA + S + + S D FT LV ++++ V T Sbjct: 79 DMKMTIDAMDLMASGRVTGFGLMSSDSDFTPLVTRIRQEGLPVYGFGTDK-----TPQAF 133 Query: 157 RRQADYFMDLAYL 169 R F+D+ L Sbjct: 134 RSACTRFIDVGAL 146 >gi|290961181|ref|YP_003492363.1| hypothetical protein SCAB_68271 [Streptomyces scabiei 87.22] gi|260650707|emb|CBG73823.1| conserved hypothetical protein [Streptomyces scabiei 87.22] Length = 407 Score = 42.8 bits (100), Expect = 0.023, Method: Composition-based stats. Identities = 30/147 (20%), Positives = 59/147 (40%), Gaps = 18/147 (12%) Query: 25 GFDIDYRKLLKAFRSRAI------VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVV 78 +D+ L++ R RA ++R Y++ G P++ P H L + +V Sbjct: 29 RITVDHAALIQGLRERAEADTERPLLRIYWF---DGAPDRVPQPEHRRLRVMP----RVT 81 Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136 ++ T + GR K +D + + E + +V+ +GDG + A + Sbjct: 82 VRLG-ALTRSDGRWAQKG-VDAAMHAELTELARNRACSDVVLVTGDGDLLPGMMAAKEHG 139 Query: 137 KKVTIVSTVLSDPS-MASDQLRRQADY 162 V + + +D S+ L +AD Sbjct: 140 VAVHLWAVQAADGDYNQSEDLVAEADE 166 >gi|325982853|ref|YP_004295255.1| hypothetical protein NAL212_2271 [Nitrosomonas sp. AL212] gi|325532372|gb|ADZ27093.1| Domain of unknown function DUF88 [Nitrosomonas sp. AL212] Length = 292 Score = 42.8 bits (100), Expect = 0.023, Method: Composition-based stats. Identities = 31/181 (17%), Positives = 57/181 (31%), Gaps = 29/181 (16%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 +P ++A+ ID N A+ LL Y GD S Sbjct: 37 EPTLRLAVLIDADNAQAAV--------IESLLAEIARFGEATVKRIY----GDFTAHASA 84 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 +V+ K A + + K++ D L +DA + + + + + Sbjct: 85 SWK----------KVLQKYAIKPVQQFAYTTGKNATDSALIIDAMDLLYTRKFDGFCLIT 134 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 D FT L L+ + +T++ D R F+ L++ + E Sbjct: 135 SDSDFTGLAMRLREEG--LTVLGFGEKK---TPDAFRNACHKFVFTEILRSSPVSESAEP 189 Query: 181 K 181 Sbjct: 190 P 190 >gi|160935678|ref|ZP_02083053.1| hypothetical protein CLOBOL_00568 [Clostridium bolteae ATCC BAA-613] gi|158441422|gb|EDP19132.1| hypothetical protein CLOBOL_00568 [Clostridium bolteae ATCC BAA-613] Length = 308 Score = 42.8 bits (100), Expect = 0.023, Method: Composition-based stats. Identities = 31/173 (17%), Positives = 55/173 (31%), Gaps = 33/173 (19%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGD--PEQ 58 M + A+ ID N+ K +K + Y + GD + Sbjct: 1 MEQNERRFAVLIDADNV------------SPKYIKYILDEVSDVGIATYKRIYGDWTDNE 48 Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHL 116 + S + LLDW ++++ G+ D + +DA + S ++ Sbjct: 49 KRSWKNVLLDW--------SVNPIQQYSYTTGKNAT----DSAMIIDAMDILYSGNVDGF 96 Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 + S D FT L L+ V + + R D F L + Sbjct: 97 CLVSSDSDFTKLAQRLREAGMFVMGIGEQKTPKPF-----RAACDTFKLLEII 144 >gi|29832687|ref|NP_827321.1| hypothetical protein SAV_6145 [Streptomyces avermitilis MA-4680] gi|29609807|dbj|BAC73856.1| hypothetical protein [Streptomyces avermitilis MA-4680] Length = 408 Score = 42.4 bits (99), Expect = 0.023, Method: Composition-based stats. Identities = 30/147 (20%), Positives = 59/147 (40%), Gaps = 18/147 (12%) Query: 25 GFDIDYRKLLKAFRSRAI------VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVV 78 +D+ L++ R RA ++R Y++ G P++ P H L + +V Sbjct: 32 RITVDHAALIQGLRERAEFDTERPLLRIYWF---DGAPDRVPQPEHRRLRVMP----RVT 84 Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136 ++ T + GR K +D + + E + +V+ +GDG + A + Sbjct: 85 VRLG-ALTRSDGRWAQKG-VDAAMHAELTELARNRACSDVVLVTGDGDLLPGMMAAKEHG 142 Query: 137 KKVTIVSTVLSDPS-MASDQLRRQADY 162 V + + +D S+ L +AD Sbjct: 143 VAVHLWAVQAADGDYNQSEDLVAEADE 169 >gi|77461998|ref|YP_351502.1| hypothetical protein RSP_1459 [Rhodobacter sphaeroides 2.4.1] gi|126460888|ref|YP_001042002.1| hypothetical protein Rsph17029_0110 [Rhodobacter sphaeroides ATCC 17029] gi|332559925|ref|ZP_08414247.1| hypothetical protein RSWS8N_12720 [Rhodobacter sphaeroides WS8N] gi|77386416|gb|ABA77601.1| conserved hypothetical protein [Rhodobacter sphaeroides 2.4.1] gi|126102552|gb|ABN75230.1| conserved hypothetical protein [Rhodobacter sphaeroides ATCC 17029] gi|332277637|gb|EGJ22952.1| hypothetical protein RSWS8N_12720 [Rhodobacter sphaeroides WS8N] Length = 248 Score = 42.4 bits (99), Expect = 0.023, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 30/85 (35%), Gaps = 8/85 (9%) Query: 99 DVELAVDAF--EQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156 D+ L + A S + V+ S D FT L A ++ + V + + Sbjct: 78 DIGLVISAMDFLHSGLFDGFVLVSSDSDFTRLAARIREQGLDVYGIGEKK-----TPEAF 132 Query: 157 RRQADYFMDLAYLKNEIARDPDEDK 181 R F+ + L ++ E + Sbjct: 133 RMACKRFIYVENLGSD-EPPAREPR 156 >gi|172039849|ref|YP_001799563.1| hypothetical protein cur_0169 [Corynebacterium urealyticum DSM 7109] gi|171851153|emb|CAQ04129.1| hypothetical protein cu0169 [Corynebacterium urealyticum DSM 7109] Length = 277 Score = 42.4 bits (99), Expect = 0.024, Method: Composition-based stats. Identities = 26/118 (22%), Positives = 44/118 (37%), Gaps = 20/118 (16%) Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG---LEHLVIFS 120 P ++ L GF V AK +S +D ++ +D + L+ L++ S Sbjct: 133 RPWVEALRNVGFAVFAKPKI---------TEESDVDADM-LDLIRRRHSEGILDGLIVAS 182 Query: 121 GDG-CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 DG F + L I TV+ + L + F+DL + R+P Sbjct: 183 ADGQNFRETLEELSE-----DIPVTVIGFREHVAWVLGNEKLRFVDLEDIPGVF-REP 234 >gi|332884085|gb|EGK04365.1| hypothetical protein HMPREF9456_01393 [Dysgonomonas mossii DSM 22836] Length = 252 Score = 42.4 bits (99), Expect = 0.024, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 27/75 (36%), Gaps = 7/75 (9%) Query: 99 DVELAVDAFEQSE--GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156 D + +DA + ++ + S D FT L L+ +V + + Sbjct: 78 DSAMIIDAMDILHGGRVDGFCLVSSDSDFTRLAVRLRESGMQVIGIGEKKTPSPFIV--- 134 Query: 157 RRQADYFMDLAYLKN 171 D F+ + +++ Sbjct: 135 --ACDKFIYIEIIRD 147 >gi|239987029|ref|ZP_04707693.1| hypothetical protein SrosN1_06957 [Streptomyces roseosporus NRRL 11379] Length = 417 Score = 42.4 bits (99), Expect = 0.025, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 59/147 (40%), Gaps = 18/147 (12%) Query: 25 GFDIDYRKLLKAFRSRAI------VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVV 78 +D+ L++ R RA ++R Y++ G P++ P H L + +V Sbjct: 29 RITVDHAALIQGLRERAEADTQQPLLRIYWF---DGAPDRVPQPEHRRLRVMP----RVT 81 Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136 ++ T + GR K +D + + E + +V+ +GDG + + + Sbjct: 82 VRLG-ALTRSDGRWAQKG-VDAAMHAELTELARNRACSDVVLVTGDGDLLPGLMSAKEHG 139 Query: 137 KKVTIVSTVLSDPS-MASDQLRRQADY 162 V + + +D S+ L +AD Sbjct: 140 VAVHLWAVQAADGDYNQSEDLVAEADE 166 >gi|325928676|ref|ZP_08189851.1| hypothetical protein XPE_3939 [Xanthomonas perforans 91-118] gi|325540954|gb|EGD12521.1| hypothetical protein XPE_3939 [Xanthomonas perforans 91-118] Length = 280 Score = 42.4 bits (99), Expect = 0.026, Method: Composition-based stats. Identities = 28/172 (16%), Positives = 54/172 (31%), Gaps = 29/172 (16%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 +P ++IAL ID N + A D+ ++ + + + + + E Sbjct: 6 NPDKRIALLIDADN----APAGKIDVVLAEVARYGVANVRRAYGNWKSPHLKGWEAALHD 61 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 + ++F + G+ D+ + +DA + + L+ I S Sbjct: 62 Y--------------AIRPIQQFAYSSGKNAS----DMAMVIDAMDLLYARNLDGFAIVS 103 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 D FT LV L KV + F + L + Sbjct: 104 SDADFTPLVMRLLTDGMKVYGFGEKKTPAPFV-----NACSKFTYVEALGQQ 150 >gi|78049501|ref|YP_365676.1| hypothetical protein XCV3945 [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78037931|emb|CAJ25676.1| conserved hypothetical protein [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 273 Score = 42.4 bits (99), Expect = 0.026, Method: Composition-based stats. Identities = 28/172 (16%), Positives = 54/172 (31%), Gaps = 29/172 (16%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 +P ++IAL ID N + A D+ ++ + + + + + E Sbjct: 4 NPDKRIALLIDADN----APAGKIDVVLAEVARYGVANVRRAYGNWKSPHLKGWEAALHD 59 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 + ++F + G+ D+ + +DA + + L+ I S Sbjct: 60 Y--------------AIRPIQQFAYSSGKNAS----DMAMVIDAMDLLYARNLDGFAIVS 101 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 D FT LV L KV + F + L + Sbjct: 102 SDADFTPLVMRLLTDGMKVYGFGEKKTPAPFV-----NACSKFTYVEALGQQ 148 >gi|326436666|gb|EGD82236.1| hypothetical protein PTSG_02907 [Salpingoeca sp. ATCC 50818] Length = 341 Score = 42.4 bits (99), Expect = 0.026, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 8/74 (10%) Query: 77 VVAKVAKEFTENCGRKRVKSSMDVELAVDAFE-QSEGLEHLVIFSGDGCFTTLVAALQR- 134 V ++ KE + V++ +DV++A + H+ F GDG F ++ AL+R Sbjct: 114 VHSQPGKEVV-----RPVQAGVDVDIAAFLLTSLPPDVTHVYCFIGDGDFVPVIEALRRP 168 Query: 135 -KVKKVTIVSTVLS 147 K V +V + Sbjct: 169 QFGKTVKLVLFSET 182 >gi|221640949|ref|YP_002527211.1| hypothetical protein RSKD131_2850 [Rhodobacter sphaeroides KD131] gi|221161730|gb|ACM02710.1| Hypothetical Protein RSKD131_2850 [Rhodobacter sphaeroides KD131] Length = 238 Score = 42.4 bits (99), Expect = 0.026, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 30/85 (35%), Gaps = 8/85 (9%) Query: 99 DVELAVDAF--EQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156 D+ L + A S + V+ S D FT L A ++ + V + + Sbjct: 68 DIGLVISAMDFLHSGLFDGFVLVSSDSDFTRLAARIREQGLDVYGIGEKK-----TPEAF 122 Query: 157 RRQADYFMDLAYLKNEIARDPDEDK 181 R F+ + L ++ E + Sbjct: 123 RMACKRFIYVENLGSD-EAPAREPR 146 >gi|172035458|ref|YP_001801959.1| hypothetical protein cce_0542 [Cyanothece sp. ATCC 51142] gi|171696912|gb|ACB49893.1| hypothetical protein cce_0542 [Cyanothece sp. ATCC 51142] Length = 235 Score = 42.4 bits (99), Expect = 0.026, Method: Composition-based stats. Identities = 26/178 (14%), Positives = 56/178 (31%), Gaps = 31/178 (17%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 ++A+ ID N+ A+ LL+ A Q + Sbjct: 12 RLAVLIDAENVSANI--------IEALLQEVAKYG---TANVKRIYGDWTSNQLNSWKGK 60 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGC 124 L+ L + ++F G+ D L +DA + + + + S D Sbjct: 61 LNKLA-------LQPIQQFRYTTGKNAT----DSALIIDAMDLLYTGNFDGFCLVSSDSD 109 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182 FT L + ++ ++ + + + F+ L ++ P ++K Sbjct: 110 FTRLASRIRESG----LIVYGFGEKIKTPEAFVVACNKFIYTDILAHQ---QPSGNEK 160 >gi|256378342|ref|YP_003102002.1| hypothetical protein Amir_4302 [Actinosynnema mirum DSM 43827] gi|255922645|gb|ACU38156.1| protein of unknown function DUF88 [Actinosynnema mirum DSM 43827] Length = 281 Score = 42.4 bits (99), Expect = 0.027, Method: Composition-based stats. Identities = 31/189 (16%), Positives = 59/189 (31%), Gaps = 54/189 (28%) Query: 7 KIALFIDG------ANLYASS--KALGFDID--YRKLLKAFR-------SRAIVIRAYYY 49 +I +F DG ++ YA++ + +D + L ++ A+Y Sbjct: 6 RIGVFYDGTWFAYLSDFYATTHPRRARVSLDGFHDALRWHVHLAEGVPLDDCVIREAHYV 65 Query: 50 TTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ 109 + P + L G + + +DV A+ Sbjct: 66 RGRIETPAT------GFDEALALAGIT--------RHDLPLHGGKEKGVDVHFAL----- 106 Query: 110 SEGLEH--------LVIFSGDGCFTTLVAALQRKVKKVTI-VSTVLSDP-------SMAS 153 E + +V+ +GD FT L A L ++ +V + V+ P + Sbjct: 107 -ETWDRAVTAGLRWVVLVTGDADFTPLAARLVKRGVRVLVPVADPRRAPQKWPENGPRTA 165 Query: 154 DQLR-RQAD 161 LR D Sbjct: 166 APLRANATD 174 >gi|302542712|ref|ZP_07295054.1| conserved hypothetical protein [Streptomyces hygroscopicus ATCC 53653] gi|302460330|gb|EFL23423.1| conserved hypothetical protein [Streptomyces himastatinicus ATCC 53653] Length = 309 Score = 42.4 bits (99), Expect = 0.027, Method: Composition-based stats. Identities = 36/189 (19%), Positives = 65/189 (34%), Gaps = 37/189 (19%) Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53 A+F+D +YA++ L F++D +++AF +A ++R Y++ Sbjct: 41 AIFVDAGYVYAAAGRLVAGTEDRRAFELDAEGIIEAFIDKARMIFPDSRLLRVYWFDGAR 100 Query: 54 GD---PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110 PEQQ P K N + +D + D + Sbjct: 101 RRIHTPEQQSIAELP---------------DVKVRLGNLNANNQQKGVDSLIRSDLESLA 145 Query: 111 EG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDL 166 + V+ GD + V A Q +V + D ++ L + D DL Sbjct: 146 RHRAIGDAVLIGGDEDLVSAVEAAQGYGARVHLWGIEALDGRNQAEPLLWEVDSQRTFDL 205 Query: 167 AYLKNEIAR 175 + K + R Sbjct: 206 DFCKPYVTR 214 >gi|85374093|ref|YP_458155.1| hypothetical protein ELI_06330 [Erythrobacter litoralis HTCC2594] gi|84787176|gb|ABC63358.1| hypothetical protein ELI_06330 [Erythrobacter litoralis HTCC2594] Length = 245 Score = 42.4 bits (99), Expect = 0.027, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 28/73 (38%), Gaps = 6/73 (8%) Query: 99 DVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156 D+ + +DA + ++ I S D FT LV L++ +V D Sbjct: 78 DMAMTIDAIDLLYQGKVDGFGIMSSDSDFTPLVTRLRQDG----LVVYGFGSTKKTPDAF 133 Query: 157 RRQADYFMDLAYL 169 + F+D+ L Sbjct: 134 KSACTRFIDIDAL 146 >gi|294666413|ref|ZP_06731658.1| GCN5-related N-acetyltransferase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292603817|gb|EFF47223.1| GCN5-related N-acetyltransferase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 276 Score = 42.4 bits (99), Expect = 0.028, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 64/207 (30%), Gaps = 46/207 (22%) Query: 8 IALFIDGANLYAS---SKALGFDID----YRKLLKAFRSRAIVIRAYYYTT-----VVGD 55 A++IDG NLY A + +D + +LL ++ Y+T Sbjct: 49 TAVYIDGYNLYYGRIRGTAFKW-LDVVTLFDRLLHDQDPTTDLLHVRYFTASALGRFATH 107 Query: 56 PEQQFSPLHPLLDWLHY-NGFQVVAKVAKEFTENCG--------------------RKRV 94 + L L + + + + K + G K Sbjct: 108 KQASEIAQTTYLRALAHTHPQRFTTTLGKHSWDKGGTLLAEFVSGQPYDRTRRVRVWKLE 167 Query: 95 KSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS-- 150 + DV LA+ + + E LV+ S D +AA++ + + P Sbjct: 168 EKQTDVNLALAMYRDAASGRYEQLVVCSNDSDIAPALAAIREDFPTIVLGMVTPRRPPVD 227 Query: 151 -----MASDQLRRQAD---YFMDLAYL 169 S L R AD +++ L Sbjct: 228 GEADRRVSVSLSRCADWIRHYILDDEL 254 >gi|18978411|ref|NP_579768.1| hypothetical protein PF2039 [Pyrococcus furiosus DSM 3638] gi|18894253|gb|AAL82163.1| hypothetical protein PF2039 [Pyrococcus furiosus DSM 3638] Length = 162 Score = 42.4 bits (99), Expect = 0.029, Method: Composition-based stats. Identities = 30/173 (17%), Positives = 61/173 (35%), Gaps = 44/173 (25%) Query: 8 IALFIDGANLYASSKALGFDI-----DYRKLLKAFRS-RAIVIRAYYYTTVVGDPEQQFS 61 I L IDG N+ L + D +K L+ R + Y Sbjct: 26 IGLIIDGPNI------LRKEFKIRLEDIKKALEKIGKIRVAKVVLNQYAP---------- 69 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIF 119 L++ + GF+ + V DV +A++A E ++ L + Sbjct: 70 --QGLIEAVVNQGFEPII--------------VAGDTDVRVAIEAMELIYNSDIDVLALA 113 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 + D F +++ +R+ K+ ++ + L+ ADY + + + + Sbjct: 114 TRDADFLPIISEAKRRGKETVVIGVEPGF----AVALQNAADYVIIMEKREED 162 >gi|163815163|ref|ZP_02206544.1| hypothetical protein COPEUT_01321 [Coprococcus eutactus ATCC 27759] gi|158449572|gb|EDP26567.1| hypothetical protein COPEUT_01321 [Coprococcus eutactus ATCC 27759] Length = 322 Score = 42.4 bits (99), Expect = 0.029, Method: Composition-based stats. Identities = 25/154 (16%), Positives = 47/154 (30%), Gaps = 26/154 (16%) Query: 49 YTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVA-------------------KEFTENC 89 Y ++ + + D L G V K+ + + Sbjct: 12 YAILIDSENVSAKYIESIFDELSRLGSITVRKIYGDWSKNNNGWDKDCLLSYSIQPVQQF 71 Query: 90 GRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLS 147 K+S D + +DA + + ++ + + D FT L + L+ K+V + + Sbjct: 72 SYTAGKNSTDSAMIIDAMDLLYTSNIDGFCLVTSDSDFTRLASRLREAGKQVIGMGERKT 131 Query: 148 DPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 + S F L L NE P Sbjct: 132 PKAFVS-----ACTSFKILDSLVNEDLNKPASKP 160 >gi|313681619|ref|YP_004059357.1| hypothetical protein Sulku_0490 [Sulfuricurvum kujiense DSM 16994] gi|313154479|gb|ADR33157.1| protein of unknown function DUF88 [Sulfuricurvum kujiense DSM 16994] Length = 246 Score = 42.4 bits (99), Expect = 0.029, Method: Composition-based stats. Identities = 29/172 (16%), Positives = 55/172 (31%), Gaps = 29/172 (16%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M D + ++A+ ID N S ++ L+ + I Y + Sbjct: 1 MIDDQARLAVLIDADN---SQPSI-----IAGLMDEIAAHGIASVKRIY------GDWTD 46 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118 + L + L +G ++F G+ D + +DA + ++ + I Sbjct: 47 TKLKGWKNALLEHG----LHPMQQFAYTTGKNAT----DSAMIIDAMDLLYTKNFDGFCI 98 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170 S D FT L + ++ KV D F+ L+ Sbjct: 99 VSSDSDFTRLASRIRESGIKVYGFGEQK-----TPKAFIGVCDKFIYTENLR 145 >gi|255280264|ref|ZP_05344819.1| conserved hypothetical protein [Bryantella formatexigens DSM 14469] gi|255269355|gb|EET62560.1| conserved hypothetical protein [Bryantella formatexigens DSM 14469] Length = 349 Score = 42.4 bits (99), Expect = 0.030, Method: Composition-based stats. Identities = 31/175 (17%), Positives = 59/175 (33%), Gaps = 31/175 (17%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRK-LLKAFRSRAIVIRAYYYTTVVGDPEQQ 59 M + E+ AL ID N+ S+K Y K +L V Y + Sbjct: 1 MKENEERYALLIDADNV--SAK-------YIKPILDELSKYGNVTYKRIY------GDWT 45 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLV 117 + + L N ++++ G+ D + +DA + + ++ Sbjct: 46 STQHASWKEVLLQNSIS----PIQQYSYTQGKNAT----DSAMIIDAMDILYTGNVDGFC 97 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 + S D FT L + L+ + V + + R+ + F L L + Sbjct: 98 LVSSDSDFTRLASRLRESGQNVIGMGEAKTPIPF-----RQACNIFTTLELLLED 147 >gi|297194912|ref|ZP_06912310.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC 25486] gi|197723066|gb|EDY66974.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC 25486] Length = 427 Score = 42.0 bits (98), Expect = 0.031, Method: Composition-based stats. Identities = 27/147 (18%), Positives = 58/147 (39%), Gaps = 18/147 (12%) Query: 25 GFDIDYRKLLKAFRS------RAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVV 78 +D+ L++ R + ++R Y++ G P++ P H L + +V Sbjct: 29 RITVDHASLIQGLRELAEADTQRPLLRIYWF---DGAPDRVPQPEHRRLRVMP----RVT 81 Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136 ++ T + GR K +D + + E + +V+ +GDG + + + Sbjct: 82 VRLG-ALTRSDGRWAQKG-VDAAMHAELTELARNRACSDVVLVTGDGDLLPGLMSAKEHG 139 Query: 137 KKVTIVSTVLSDPS-MASDQLRRQADY 162 V + + +D S+ L +AD Sbjct: 140 VAVHLWAVQAADGDYNQSEDLVAEADE 166 >gi|71905737|ref|YP_283324.1| hypothetical protein Daro_0095 [Dechloromonas aromatica RCB] gi|71845358|gb|AAZ44854.1| Protein of unknown function DUF88 [Dechloromonas aromatica RCB] Length = 273 Score = 42.0 bits (98), Expect = 0.032, Method: Composition-based stats. Identities = 26/160 (16%), Positives = 46/160 (28%), Gaps = 29/160 (18%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 ++A+ ID N A+ LL A S + Sbjct: 13 RLAVLIDADNAQATV--------IEGLLAEVARFGE---ATVKRIYGDFTSPSSSQWKKV 61 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGC 124 L+ Q K ++F G+ D + +DA + + + + S D Sbjct: 62 LN-------QHAIKPVQQFAYTTGKNAT----DSTMIIDAMDLLYTRRFDGFCLVSSDSD 110 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 FT L ++ + V + D R F+ Sbjct: 111 FTGLALRIREEGLTV-----LGFGEEKTPDAFRNACHKFI 145 >gi|257387927|ref|YP_003177700.1| hypothetical protein Hmuk_1879 [Halomicrobium mukohataei DSM 12286] gi|257170234|gb|ACV47993.1| protein of unknown function DUF88 [Halomicrobium mukohataei DSM 12286] Length = 152 Score = 42.0 bits (98), Expect = 0.032, Method: Composition-based stats. Identities = 28/159 (17%), Positives = 53/159 (33%), Gaps = 31/159 (19%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 ++ +F+DG N+ FD+D + + + + Y Sbjct: 15 SEPRVGVFVDGPNV----LRSEFDVDLDDVREEAENWGRLAITRLYV--------DEHAT 62 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVI--FSG 121 L+ GF+VV +DV+LAVDA ++ S Sbjct: 63 PGLIQAAEARGFEVVV--------------TSGDVDVKLAVDATAAGADDAIDLLAIVSR 108 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160 D F ++ ++ + + ++ + SD LR A Sbjct: 109 DTDFKPVLESVGERG--IETLAIAPGEHGR-SDALRNAA 144 >gi|326779887|ref|ZP_08239152.1| Domain of unknown function DUF88 protein [Streptomyces cf. griseus XylebKG-1] gi|326660220|gb|EGE45066.1| Domain of unknown function DUF88 protein [Streptomyces cf. griseus XylebKG-1] Length = 418 Score = 42.0 bits (98), Expect = 0.033, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 59/147 (40%), Gaps = 18/147 (12%) Query: 25 GFDIDYRKLLKAFRSRAI------VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVV 78 +D+ L++ R RA ++R Y++ G P++ P H L + +V Sbjct: 29 RITVDHAALIQGLRERAEADTQQPLLRIYWF---DGAPDRVPQPEHRRLRVMP----RVT 81 Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136 ++ T + GR K +D + + E + +V+ +GDG + + + Sbjct: 82 VRLG-ALTRSDGRWAQKG-VDAAMHAELTELARNRACSDVVLVTGDGDLLPGLMSAKEHG 139 Query: 137 KKVTIVSTVLSDPS-MASDQLRRQADY 162 V + + +D S+ L +AD Sbjct: 140 VAVHLWAVQAADGDYNQSEDLVAEADE 166 >gi|120552973|ref|YP_957324.1| hypothetical protein Maqu_0029 [Marinobacter aquaeolei VT8] gi|120322822|gb|ABM17137.1| conserved hypothetical protein [Marinobacter aquaeolei VT8] Length = 271 Score = 42.0 bits (98), Expect = 0.033, Method: Composition-based stats. Identities = 5/42 (11%), Positives = 19/42 (45%) Query: 97 SMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKK 138 M + + + + + ++ +++ +GD F +R+ + Sbjct: 194 DMRIGIDIASLTLKQQVDTIILVAGDSDFVPAAKMARREGIE 235 >gi|323698514|ref|ZP_08110426.1| hypothetical protein DND132_1098 [Desulfovibrio sp. ND132] gi|323458446|gb|EGB14311.1| hypothetical protein DND132_1098 [Desulfovibrio desulfuricans ND132] Length = 241 Score = 42.0 bits (98), Expect = 0.035, Method: Composition-based stats. Identities = 29/168 (17%), Positives = 50/168 (29%), Gaps = 29/168 (17%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 + IALFID N A +K + F +L + Y + Sbjct: 5 SDEQHIALFIDADN--APAKFIEF------ILTDLAKYGSLAIRRAYGNWKNE------- 49 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLV--IFS 120 L F + ++F G+ D+ + +DA + + V + S Sbjct: 50 ---YLKGWEECLFDKAIQPVQQFDMTKGKNAT----DMAMTIDAMDILYQKDIGVFGLVS 102 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 D F L L+ + K V + + + F L Sbjct: 103 SDCDFAPLATRLRAEGKTVVGYGSRQTPEAFT-----NACSTFSYLDD 145 >gi|242209571|ref|XP_002470632.1| predicted protein [Postia placenta Mad-698-R] gi|220730311|gb|EED84170.1| predicted protein [Postia placenta Mad-698-R] Length = 456 Score = 42.0 bits (98), Expect = 0.035, Method: Composition-based stats. Identities = 15/114 (13%), Positives = 38/114 (33%), Gaps = 16/114 (14%) Query: 34 LKAFRSRAIVIRAY-YYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRK 92 + R ++++ Y+ + P + L L G V+ + Sbjct: 31 IAQLARRYGSVKSFRAYSELPEQPSPKNIALRS---DLQLCGVSVIDCPHNGGKDVA--- 84 Query: 93 RVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVS 143 D + VD + +++ +GD F V+ L + ++ +++ Sbjct: 85 ------DKMMIVDMMAFAIDTPAPATIILITGDRDFVYAVSILSLRQYRLVVLA 132 >gi|194291074|ref|YP_002006981.1| hypothetical protein RALTA_A2999 [Cupriavidus taiwanensis LMG 19424] gi|193224909|emb|CAQ70920.1| conserved hypothetical protein [Cupriavidus taiwanensis LMG 19424] Length = 426 Score = 42.0 bits (98), Expect = 0.035, Method: Composition-based stats. Identities = 14/77 (18%), Positives = 28/77 (36%), Gaps = 7/77 (9%) Query: 99 DVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156 D + +DA + + + I S D FT L + ++ + V + + Sbjct: 81 DSAMIIDAMDLLYTGRFDGFCIVSSDSDFTRLASRIREQGLTVYGFGERKTPKPFVT--- 137 Query: 157 RRQADYFMDLAYLKNEI 173 D F+ L+ E+ Sbjct: 138 --ACDKFIYSDVLRAEV 152 >gi|14590027|ref|NP_142091.1| hypothetical protein PH0073 [Pyrococcus horikoshii OT3] gi|3256459|dbj|BAA29142.1| 195aa long hypothetical protein [Pyrococcus horikoshii OT3] Length = 195 Score = 42.0 bits (98), Expect = 0.037, Method: Composition-based stats. Identities = 34/168 (20%), Positives = 66/168 (39%), Gaps = 32/168 (19%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 ++IAL +DG N+ K LG + +++A S + A Q++P Sbjct: 29 KRIALLVDGPNILR--KELGVHL--EDIVEALSSLGNIRVAKVIL-------NQYAP-QS 76 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDG 123 L++ + GF+ V V + V+LAV+A + ++ + + + + Sbjct: 77 LIEAVSNQGFEPVI--------------VAGEIGVKLAVEAMREVYNPNIDIIALATRNT 122 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 F ++ + K K+ I+ S L+ ADY + L Sbjct: 123 EFVPIILKAKEKGKETAIIGVEPGF----SSALKHAADYVIVLESRGE 166 >gi|325960103|ref|YP_004291569.1| hypothetical protein Metbo_2384 [Methanobacterium sp. AL-21] gi|325331535|gb|ADZ10597.1| protein of unknown function DUF88 [Methanobacterium sp. AL-21] Length = 165 Score = 42.0 bits (98), Expect = 0.038, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 61/166 (36%), Gaps = 32/166 (19%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 + I L +DG N+ L + D ++ + V Q++ Sbjct: 21 SQGKNIGLLVDGPNM------LRKEFD-----CDLEIVRDLMLEHGNVKVGKVFLNQYAS 69 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFS 120 L++ + GF + V DV++A++AFE ++ + + + Sbjct: 70 D-KLIEAVVNQGFSPMI--------------VSGETDVQMAIEAFELIHNPNIDIIALMT 114 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 D F L+ + K+ ++ ++P ++ L+ AD + L Sbjct: 115 RDVDFFPLINVAKENGKQTIVIG---AEPGFSA-ALKNSADDTITL 156 >gi|308177196|ref|YP_003916602.1| hypothetical protein AARI_14200 [Arthrobacter arilaitensis Re117] gi|307744659|emb|CBT75631.1| hypothetical protein AARI_14200 [Arthrobacter arilaitensis Re117] Length = 335 Score = 42.0 bits (98), Expect = 0.038, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 29/76 (38%), Gaps = 7/76 (9%) Query: 96 SSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSM-- 151 +D+ LA+D + + SGD V Q KV ++ SD + Sbjct: 95 KGVDLRLALDLVGVARNRSASIAYLVSGDDDLAEAVEEAQDLGMKVVLLGVAKSDSRLGV 154 Query: 152 --ASDQLRRQADYFMD 165 ++ L AD +++ Sbjct: 155 ASVAEHLALTAD-YIE 169 >gi|262375022|ref|ZP_06068256.1| conserved hypothetical protein [Acinetobacter lwoffii SH145] gi|262310035|gb|EEY91164.1| conserved hypothetical protein [Acinetobacter lwoffii SH145] Length = 269 Score = 42.0 bits (98), Expect = 0.039, Method: Composition-based stats. Identities = 15/73 (20%), Positives = 30/73 (41%), Gaps = 7/73 (9%) Query: 99 DVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156 D+ L +DA + + L+ I S D FT L + ++ +T+ + Sbjct: 79 DMILIIDAMDLLYAGALDGFCIVSSDSDFTPLASRIRENG--LTVYGFGKKA---TPEAF 133 Query: 157 RRQADYFMDLAYL 169 ++ D F+ + L Sbjct: 134 KKACDKFIYIENL 146 >gi|126734452|ref|ZP_01750199.1| hypothetical protein RCCS2_09834 [Roseobacter sp. CCS2] gi|126717318|gb|EBA14182.1| hypothetical protein RCCS2_09834 [Roseobacter sp. CCS2] Length = 213 Score = 42.0 bits (98), Expect = 0.039, Method: Composition-based stats. Identities = 27/176 (15%), Positives = 51/176 (28%), Gaps = 26/176 (14%) Query: 7 KIALFIDGANLYASSK---ALGFDIDYRKLLKAFRSRAIVIRAYYY----TTVVGDPEQQ 59 ++ +++DG NLY + D + L VI Y + Sbjct: 2 RVRVYVDGFNLYYRLLKHSRYKWT-DLKLLSSELLQTGDVIERIRYFTADVSPRAGDPDA 60 Query: 60 FSPLHPLLDWLHYNG----------FQVVAKVAKEFTEN--CGRKRVKSSMDVELAVDAF 107 + L + + + + E+ R + DV LA Sbjct: 61 PTRQQAYFRALRTIPELEIHKGTFLAKTIHRPVRGQEESYVYVRDTEEKGSDVNLASHLL 120 Query: 108 E--QSEGLEHLVIFSGDGCFTTLVAAL-QRKVKKVTIVSTVLSDPSMASDQLRRQA 160 + + ++ S D + + Q K V + + P S LR+ A Sbjct: 121 MDGFCDTYDIALVMSQDTDLLEPIRMVSQELGKVVIVAWFEDTSP---SKLLRQYA 173 >gi|329940919|ref|ZP_08290199.1| hypothetical protein SGM_5691 [Streptomyces griseoaurantiacus M045] gi|329300213|gb|EGG44111.1| hypothetical protein SGM_5691 [Streptomyces griseoaurantiacus M045] Length = 406 Score = 42.0 bits (98), Expect = 0.039, Method: Composition-based stats. Identities = 30/147 (20%), Positives = 59/147 (40%), Gaps = 18/147 (12%) Query: 25 GFDIDYRKLLKAFRSRAI------VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVV 78 +D+ L++ R RA ++R Y++ G P++ P H L + +V Sbjct: 32 RITVDHAALIQGLRERAESDTRQPLLRIYWF---DGAPDRVPQPEHRRLRVMP----RVT 84 Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136 ++ T + GR K +D + + E + +V+ +GDG + A + Sbjct: 85 VRLG-ALTRSDGRWAQKG-VDAAMHAELTELARNRACSDVVLITGDGDLLPGMMAAKEHG 142 Query: 137 KKVTIVSTVLSDPS-MASDQLRRQADY 162 V + + +D S+ L +AD Sbjct: 143 VAVHLWAVQAADGDYNQSEDLVAEADE 169 >gi|119356715|ref|YP_911359.1| hypothetical protein Cpha266_0887 [Chlorobium phaeobacteroides DSM 266] gi|119354064|gb|ABL64935.1| conserved hypothetical protein [Chlorobium phaeobacteroides DSM 266] Length = 136 Score = 42.0 bits (98), Expect = 0.039, Method: Composition-based stats. Identities = 25/136 (18%), Positives = 44/136 (32%), Gaps = 23/136 (16%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLL-------KAFRSRAIVIRAYYYTTVVGDPE 57 +E++ +++DG NLY G DY K L + ++ Y+T+ V D Sbjct: 11 KERVHVYVDGFNLYFGMLEAG--FDYCKWLNLKLLATNLLKPNQELVCVKYFTSRVSDNP 68 Query: 58 QQFSPLHPLLDWLHYN------GFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE 111 + ++ L G + + N + DV +A S Sbjct: 69 DKQKRQTTYIEALESERVHILYGHYQRNPIECKRCGNIWASYNEKMTDVNIA---MSLSG 125 Query: 112 GLEHLVIFSGDGCFTT 127 + H G F Sbjct: 126 RVRH-----GHADFRR 136 >gi|302692518|ref|XP_003035938.1| hypothetical protein SCHCODRAFT_105540 [Schizophyllum commune H4-8] gi|300109634|gb|EFJ01036.1| hypothetical protein SCHCODRAFT_105540 [Schizophyllum commune H4-8] Length = 710 Score = 42.0 bits (98), Expect = 0.040, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 10/73 (13%) Query: 98 MDVELAVDAFEQSEGLEH-----LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMA 152 +D L D + L+H +V+ SGD F + + L+R++ V ++ P Sbjct: 79 VDQMLQTDMLVFA--LDHPAPATIVLISGDRDFAYVASILRRRMYNVVLICHSTPGPH-- 134 Query: 153 SDQLRRQADYFMD 165 L +Q +D Sbjct: 135 -KSLLQQVSTHID 146 >gi|149184574|ref|ZP_01862892.1| hypothetical protein ED21_27688 [Erythrobacter sp. SD-21] gi|148831894|gb|EDL50327.1| hypothetical protein ED21_27688 [Erythrobacter sp. SD-21] Length = 241 Score = 42.0 bits (98), Expect = 0.040, Method: Composition-based stats. Identities = 34/176 (19%), Positives = 53/176 (30%), Gaps = 28/176 (15%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 IAL ID N ID +L V Y Q + Sbjct: 9 IALLIDADN------TTPRGIDP--VLTVMAELGQVNIKRAYGNFTKKNLQGWDKYSHKF 60 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCF 125 L Y F + K++ D+ + +DA + ++ I S D F Sbjct: 61 GILPYQQFDMTT--------------GKNATDMAMTIDAIDLLYQGKVDGFGIMSSDSDF 106 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 T L L++ ++ S D + F+D+ L A +P K Sbjct: 107 TPLATRLRQDG----LIVYGFGSKSKTPDAFKSACTRFIDIDALIAGAADEPAPSK 158 >gi|119472307|ref|ZP_01614467.1| hypothetical protein ATW7_14156 [Alteromonadales bacterium TW-7] gi|119445029|gb|EAW26325.1| hypothetical protein ATW7_14156 [Alteromonadales bacterium TW-7] Length = 227 Score = 42.0 bits (98), Expect = 0.040, Method: Composition-based stats. Identities = 31/140 (22%), Positives = 48/140 (34%), Gaps = 34/140 (24%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAI-VIRAYYYTTVVGDPEQQFSPLH 64 +K ALFID N+ K ++ ++ + Y L Sbjct: 5 KKTALFIDAENISH------------KYIEQIMAKFEHIEVKKAYGNFGA------VQLK 46 Query: 65 PLLDWLHYNGFQVV--AKVAKEFTENCGRKRVKSSM-DVELAVDAFE--QSEGLEHLVIF 119 P ++ ++V K+ K KS+ D+ L V E ++ I Sbjct: 47 PWVNICSRFAIEMVYQEKLVK----------SKSNAADIALTVGVMESLYVSPIDTFAIA 96 Query: 120 SGDGCFTTLVAALQRKVKKV 139 S D F LV L+R KKV Sbjct: 97 SSDSDFAALVHFLRRNGKKV 116 >gi|182439235|ref|YP_001826954.1| hypothetical protein SGR_5442 [Streptomyces griseus subsp. griseus NBRC 13350] gi|178467751|dbj|BAG22271.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus NBRC 13350] Length = 421 Score = 41.7 bits (97), Expect = 0.040, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 59/147 (40%), Gaps = 18/147 (12%) Query: 25 GFDIDYRKLLKAFRSRAI------VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVV 78 +D+ L++ R RA ++R Y++ G P++ P H L + +V Sbjct: 32 RITVDHAALIQGLRERAEADTQQPLLRIYWF---DGAPDRVPQPEHRRLRVMP----RVT 84 Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136 ++ T + GR K +D + + E + +V+ +GDG + + + Sbjct: 85 VRLG-ALTRSDGRWAQKG-VDAAMHAELTELARNRACSDVVLVTGDGDLLPGLMSAKEHG 142 Query: 137 KKVTIVSTVLSDPS-MASDQLRRQADY 162 V + + +D S+ L +AD Sbjct: 143 VAVHLWAVQAADGDYNQSEDLVAEADE 169 >gi|126656067|ref|ZP_01727451.1| hypothetical protein CY0110_03254 [Cyanothece sp. CCY0110] gi|126622347|gb|EAZ93053.1| hypothetical protein CY0110_03254 [Cyanothece sp. CCY0110] Length = 235 Score = 41.7 bits (97), Expect = 0.041, Method: Composition-based stats. Identities = 23/160 (14%), Positives = 48/160 (30%), Gaps = 28/160 (17%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 ++A+ ID N+ A+ LL+ A Q + Sbjct: 12 RLAVLIDAENVSANI--------IEPLLQEVAKYG---TANVKRIYGDWTSNQLNSWKSK 60 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGC 124 L+ L + ++F G+ D L +DA + + + + S D Sbjct: 61 LNKLA-------LQPIQQFRYTTGKNAT----DSALIIDAMDLLYTNNFDGFCLVSSDSD 109 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 FT L + ++ ++ + + F+ Sbjct: 110 FTRLASRIRESG----LIVYGFGEKIKTPEAFVVACSKFI 145 >gi|77458643|ref|YP_348149.1| hypothetical protein Pfl01_2418 [Pseudomonas fluorescens Pf0-1] gi|77382646|gb|ABA74159.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1] Length = 247 Score = 41.7 bits (97), Expect = 0.045, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 24/54 (44%), Gaps = 3/54 (5%) Query: 86 TENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVK 137 T+ R K +D+ + VD S + ++ +V+ +GD F +R+ Sbjct: 149 TDVSIETRQKG-VDMRIGVDVASLSFKQQVDQIVLIAGDADFVPAAKMARREGV 201 >gi|307824274|ref|ZP_07654500.1| protein of unknown function DUF88 [Methylobacter tundripaludum SV96] gi|307734654|gb|EFO05505.1| protein of unknown function DUF88 [Methylobacter tundripaludum SV96] Length = 276 Score = 41.7 bits (97), Expect = 0.045, Method: Composition-based stats. Identities = 34/172 (19%), Positives = 58/172 (33%), Gaps = 29/172 (16%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 + ++ AL ID N A +KA ID AI+ A Y V Sbjct: 4 NENKRFALLIDADN--AQAKA----ID-----------AILTEAARYGDVTSRRCYGDWT 46 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 L W V+ K A + + K++ D L +DA + + + S Sbjct: 47 HTRLGSWKS-----VLNKHAIQPMQQFAYTSGKNATDSALIIDAMDLLYTGKFNGFFLVS 101 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 D FT L L+ +V + + + R + F+ + ++ Sbjct: 102 SDSDFTKLATRLREAGLEV-----IGIGKRLTPEAFRAACNKFIFTETIMDD 148 >gi|269957712|ref|YP_003327501.1| hypothetical protein Xcel_2936 [Xylanimonas cellulosilytica DSM 15894] gi|269306393|gb|ACZ31943.1| conserved hypothetical protein [Xylanimonas cellulosilytica DSM 15894] Length = 186 Score = 41.7 bits (97), Expect = 0.046, Method: Composition-based stats. Identities = 27/157 (17%), Positives = 55/157 (35%), Gaps = 35/157 (22%) Query: 3 DPREKIALFIDGANLYASSKALGFDI-------DYRKLLKAFRS------RAIVIRAYYY 49 + K L +DG N+ A+ LG ++ D R + V+ ++ Sbjct: 1 MSQRKTYLLVDGENIDAT---LGMNVLGRRPNPDERPRWDRITAFAAQVWGQDVVPLFFL 57 Query: 50 TTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVEL--AVDAF 107 G P + L G++ + + +D+ + +DA Sbjct: 58 NATSG------QMPMPFVQALLAMGYRPI---------PLAGSATEKVVDIGIQRTLDAL 102 Query: 108 EQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVST 144 +E +++ S DG F + AL +KV +++ Sbjct: 103 --AERDGDVLLASHDGDFLPQIEALLGSDRKVGLLAF 137 >gi|227542867|ref|ZP_03972916.1| conserved hypothetical protein [Corynebacterium glucuronolyticum ATCC 51866] gi|227181372|gb|EEI62344.1| conserved hypothetical protein [Corynebacterium glucuronolyticum ATCC 51866] Length = 182 Score = 41.7 bits (97), Expect = 0.048, Method: Composition-based stats. Identities = 10/63 (15%), Positives = 24/63 (38%), Gaps = 4/63 (6%) Query: 76 QVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQ 133 ++ K E + K +D+ + +D ++ + +V+ +GD F + Sbjct: 58 KIQVKDLTE-DDFSLDINQKG-VDMRIGLDIASLAQQGIVNQIVMITGDSDFVPAAKHAR 115 Query: 134 RKV 136 R Sbjct: 116 RMG 118 >gi|325918809|ref|ZP_08180894.1| hypothetical protein XVE_4927 [Xanthomonas vesicatoria ATCC 35937] gi|325534983|gb|EGD06894.1| hypothetical protein XVE_4927 [Xanthomonas vesicatoria ATCC 35937] Length = 247 Score = 41.7 bits (97), Expect = 0.048, Method: Composition-based stats. Identities = 32/187 (17%), Positives = 61/187 (32%), Gaps = 35/187 (18%) Query: 8 IALFIDGANLYAS---SKALGFDID----YRKLLKAFRSRAIVIRAYYYTTVV----GDP 56 A++IDG NLY A + +D + +LL ++ Y+T Sbjct: 21 TAVYIDGYNLYYGRIRGTAFKW-LDVVALFDRLLHDQDPTTDLLHVRYFTAPALGRFATH 79 Query: 57 EQQFSPLHPLLDWLHY-NGFQVVAKVAKEFTENCG--------------------RKRVK 95 +Q L L + + + + K + G K + Sbjct: 80 KQASETQAAYLRALAHTHPQRFTTTLGKHSWDKGGTLLPEFVSGQPYDRARRVRVWKLEE 139 Query: 96 SSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMAS 153 DV LA+ + + + LV+ S D + A++ V + +P + Sbjct: 140 KQTDVNLALTMYRDAASARYQQLVVCSNDSDIEPALVAIREDFPSVVLGVVTPRNPPVDG 199 Query: 154 DQLRRQA 160 + RR + Sbjct: 200 ESDRRVS 206 >gi|282897247|ref|ZP_06305249.1| hypothetical protein CRD_02171 [Raphidiopsis brookii D9] gi|281197899|gb|EFA72793.1| hypothetical protein CRD_02171 [Raphidiopsis brookii D9] Length = 128 Score = 41.7 bits (97), Expect = 0.051, Method: Composition-based stats. Identities = 31/138 (22%), Positives = 51/138 (36%), Gaps = 29/138 (21%) Query: 8 IALFIDGANLYASSKALGFDID----------YRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 A+ D NL +K F D YR++L+ + Y + Sbjct: 6 TAILYDIENL---TKGYSFSKDFIKELSLKQIYRQILEVDIVN-KICLQRAYA---NWSD 58 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLE 114 + S L ++ L + Q+ R K++ D++L VD + + +E Sbjct: 59 HRLSLLRGEINELGIDPIQIF---------GFARYHKKNAADIQLVVDTMDITIRFPHIE 109 Query: 115 HLVIFSGDGCFTTLVAAL 132 VI SGDG F +L L Sbjct: 110 VYVIVSGDGGFASLAKKL 127 >gi|152992773|ref|YP_001358494.1| hypothetical protein SUN_1182 [Sulfurovum sp. NBC37-1] gi|151424634|dbj|BAF72137.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1] Length = 249 Score = 41.7 bits (97), Expect = 0.051, Method: Composition-based stats. Identities = 27/167 (16%), Positives = 52/167 (31%), Gaps = 31/167 (18%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M + IALFID N+ +++ ++ +V Y D Sbjct: 1 MTKKEDHIALFIDCDNISH--RSI------EGIINELSKYGVVNIRQAYGNWTKDN---- 48 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSM-DVELAVDAFEQSEG--LEHLV 117 L D L + K ++F + D+ + +DA + ++ Sbjct: 49 --LKNWEDKLL----EFAIKPIQQF-----DYSKNKNATDILMTIDAIDLLHTKDIDAFA 97 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 + D FT +V +Q + KV + + F+ Sbjct: 98 FATSDSDFTPVVMRVQAEGIKVFGFGEKKTPKPFMA-----ACSQFI 139 >gi|91793924|ref|YP_563575.1| NAD(+) kinase [Shewanella denitrificans OS217] gi|123356621|sp|Q12L24|PPNK_SHEDO RecName: Full=Probable inorganic polyphosphate/ATP-NAD kinase; Short=Poly(P)/ATP NAD kinase gi|91715926|gb|ABE55852.1| NAD(+) kinase [Shewanella denitrificans OS217] Length = 309 Score = 41.7 bits (97), Expect = 0.052, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 32/96 (33%), Gaps = 17/96 (17%) Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVEL-AVDAFEQSEGLEHLVIF 119 + L WL G+ V+ +RV + +++E AVD E E + ++ Sbjct: 38 QTIEKLHLWLTAQGYTVLV-----------EERVSAELEIEFQAVDLVEIGERCDLAIVV 86 Query: 120 SGDGCFTTLVAALQR-----KVKKVTIVSTVLSDPS 150 GDG L R + + P Sbjct: 87 GGDGNMLGAARVLARYDVAVIGVNRGNLGFLTDLPP 122 >gi|218768924|ref|YP_002343436.1| hypothetical protein NMA2192 [Neisseria meningitidis Z2491] gi|6900422|emb|CAB72032.1| hypothetical protein [Neisseria meningitidis] gi|121052932|emb|CAM09286.1| conserved hypothetical protein [Neisseria meningitidis Z2491] gi|254671541|emb|CBA09160.1| conserved hypothetical protein [Neisseria meningitidis alpha153] gi|254672832|emb|CBA07007.1| conserved hypothetical protein [Neisseria meningitidis alpha275] gi|308388512|gb|ADO30832.1| hypothetical protein NMBB_0327 [Neisseria meningitidis alpha710] gi|319411222|emb|CBY91629.1| conserved hypothetical protein [Neisseria meningitidis WUE 2594] gi|325131019|gb|EGC53746.1| hypothetical protein NMBOX9930304_0283 [Neisseria meningitidis OX99.30304] gi|325131640|gb|EGC54346.1| gp9, Cpp15 [Neisseria meningitidis M6190] gi|325137119|gb|EGC59715.1| gp9, Cpp15 [Neisseria meningitidis M0579] gi|325139012|gb|EGC61559.1| hypothetical protein NMBES14902_0278 [Neisseria meningitidis ES14902] gi|325199009|gb|ADY94465.1| hypothetical protein NMBG2136_1806 [Neisseria meningitidis G2136] gi|325202880|gb|ADY98334.1| hypothetical protein NMBM01240149_1792 [Neisseria meningitidis M01-240149] gi|325207321|gb|ADZ02773.1| conserved hypothetical protein [Neisseria meningitidis NZ-05/33] Length = 219 Score = 41.7 bits (97), Expect = 0.052, Method: Composition-based stats. Identities = 9/51 (17%), Positives = 21/51 (41%), Gaps = 1/51 (1%) Query: 87 ENCGRKRVKS-SMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKV 136 + + K M + L + + + + +++FSGD F +R+ Sbjct: 139 DVVLDVKQKGVDMRIGLDISSITLKKQADKIILFSGDSDFVPAAKLARREG 189 >gi|313904540|ref|ZP_07837916.1| protein of unknown function DUF88 [Eubacterium cellulosolvens 6] gi|313470682|gb|EFR66008.1| protein of unknown function DUF88 [Eubacterium cellulosolvens 6] Length = 283 Score = 41.3 bits (96), Expect = 0.053, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 31/79 (39%), Gaps = 7/79 (8%) Query: 99 DVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156 D + +DA + S ++ I S D FT LVA L+ KV + + S Sbjct: 76 DSAMIIDAMDILYSNTVDGFCIVSSDSDFTRLVARLREAGHKVIGMGESKTPQPFIS--- 132 Query: 157 RRQADYFMDLAYLKNEIAR 175 + F L L ++ + Sbjct: 133 --ACNQFKYLDMLYDQRQQ 149 >gi|146276115|ref|YP_001166274.1| hypothetical protein Rsph17025_0057 [Rhodobacter sphaeroides ATCC 17025] gi|145554356|gb|ABP68969.1| hypothetical protein Rsph17025_0057 [Rhodobacter sphaeroides ATCC 17025] Length = 246 Score = 41.3 bits (96), Expect = 0.053, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 28/76 (36%), Gaps = 7/76 (9%) Query: 99 DVELAVDAF--EQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156 D+ L + A S + V+ S D FT L A ++ + V + + Sbjct: 78 DIGLVIAAMDFLHSGLFDGFVLVSSDSDFTRLAARIREQGLDVYGIGEKK-----TPEAF 132 Query: 157 RRQADYFMDLAYLKNE 172 R F+ + L ++ Sbjct: 133 RMACKRFIYVENLGSD 148 >gi|313159517|gb|EFR58880.1| conserved hypothetical protein [Alistipes sp. HGB5] Length = 186 Score = 41.3 bits (96), Expect = 0.054, Method: Composition-based stats. Identities = 19/154 (12%), Positives = 47/154 (30%), Gaps = 19/154 (12%) Query: 24 LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAK 83 + + + LL V+ + + ++ GFQV Sbjct: 43 YSWRLSFGNLLNKVSEGKKVVSTLLVGSRPPKNDSLWTSAKK-------QGFQVSV---- 91 Query: 84 EFTENCGRKRVKSSMDVELA---VDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVT 140 + + + K+ +D ++ L++ SGD F L+ + Sbjct: 92 --FDRNTQGKEKA-VDAQIVAQGTKMICTHPNKGVLILLSGDSDFIPLLEICNELGWESE 148 Query: 141 IVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 I + + P + ++ + L + ++I Sbjct: 149 IWAFKSALP--CAKKMIQYVTRVNYLDSIFSDIG 180 >gi|294626535|ref|ZP_06705134.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294665102|ref|ZP_06730406.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292599225|gb|EFF43363.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292605144|gb|EFF48491.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 270 Score = 41.3 bits (96), Expect = 0.055, Method: Composition-based stats. Identities = 28/172 (16%), Positives = 54/172 (31%), Gaps = 29/172 (16%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 +P ++IAL ID N + A D+ ++ + + + + + E Sbjct: 6 NPDKRIALLIDADN----APAGKIDVVLAEVARYGVANVRRAYGNWKSPHLKGWEAALHD 61 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 + ++F + G+ D+ + +DA + + L+ I S Sbjct: 62 Y--------------AIRPIQQFAYSSGKNAS----DMAMVIDAMDLLYARNLDGFAIVS 103 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 D FT LV L KV + F + L + Sbjct: 104 SDADFTPLVMRLLTDGMKVYGFGEKKTPAPFV-----NACSKFTYVEALGQQ 150 >gi|325264389|ref|ZP_08131120.1| hypothetical protein HMPREF0240_03396 [Clostridium sp. D5] gi|324030460|gb|EGB91744.1| hypothetical protein HMPREF0240_03396 [Clostridium sp. D5] Length = 321 Score = 41.3 bits (96), Expect = 0.055, Method: Composition-based stats. Identities = 41/174 (23%), Positives = 66/174 (37%), Gaps = 29/174 (16%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRK-LLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 +K AL ID N+ S+K Y K +L V Y + GD ++ Sbjct: 3 DKYALLIDADNV--SAK-------YIKPILDELSKYGNVT----YKRIYGDWTSTYNS-- 47 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 + L N ++F+ G+ S+M ++ A+D SE LE + S D Sbjct: 48 SWKEELLQNSIT----PIQQFSYTHGKNATDSAMIID-AMDMLYTSE-LEGFCLVSSDSD 101 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE--IARD 176 FT L + L+ K V + + R+ D F L L + I ++ Sbjct: 102 FTKLASRLRESGKTVIGMGEDKTPAPF-----RKACDIFTVLELLLEDNTIEKE 150 >gi|73542916|ref|YP_297436.1| hypothetical protein Reut_A3232 [Ralstonia eutropha JMP134] gi|72120329|gb|AAZ62592.1| conserved hypothetical protein [Ralstonia eutropha JMP134] Length = 419 Score = 41.3 bits (96), Expect = 0.055, Method: Composition-based stats. Identities = 13/78 (16%), Positives = 28/78 (35%), Gaps = 7/78 (8%) Query: 99 DVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156 D + +DA + +E + + S D FT L + ++ + V + + Sbjct: 81 DSAMIIDAMDLLYTERFDGFCLVSSDSDFTRLASRIREQGLIVYGFGERKTPKPFVT--- 137 Query: 157 RRQADYFMDLAYLKNEIA 174 D F+ L+ + Sbjct: 138 --ACDKFIYSDVLRADAE 153 >gi|239916658|ref|YP_002956216.1| Protein of unknown function DUF88 [Micrococcus luteus NCTC 2665] gi|281414886|ref|ZP_06246628.1| hypothetical protein MlutN2_06748 [Micrococcus luteus NCTC 2665] gi|289706971|ref|ZP_06503306.1| conserved hypothetical protein [Micrococcus luteus SK58] gi|239837865|gb|ACS29662.1| Protein of unknown function DUF88 [Micrococcus luteus NCTC 2665] gi|289556296|gb|EFD49652.1| conserved hypothetical protein [Micrococcus luteus SK58] Length = 182 Score = 41.3 bits (96), Expect = 0.056, Method: Composition-based stats. Identities = 34/170 (20%), Positives = 59/170 (34%), Gaps = 32/170 (18%) Query: 10 LFIDGANLYAS------SKALGFDIDYR--KLLKAFRSRAIV-IRAYYYTTVVGDPEQQF 60 L IDG N+ A+ + D R +LL R ++ ++ + G+ Sbjct: 8 LLIDGENIDATLGTSILQRRPQPDERPRWKRLLGYLEDRWDQPVKGLFFLAIDGEIP--- 64 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 P + L GFQ + G +V +D+ + A + +V+ S Sbjct: 65 ---IPFVQALTALGFQPIML--------RGEGKV---VDIGIQRTAEALLGREDDVVLVS 110 Query: 121 GDGCFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQAD-YFMDLAY 168 D F + L ++ I+ S +LRR F DL + Sbjct: 111 HDADFAPQLTDLAATPGRRTGIMGF----EEFLSHELRRIPGVEFFDLEH 156 >gi|326802048|ref|YP_004319867.1| hypothetical protein Sph21_4688 [Sphingobacterium sp. 21] gi|326552812|gb|ADZ81197.1| Domain of unknown function DUF88 [Sphingobacterium sp. 21] Length = 272 Score = 41.3 bits (96), Expect = 0.058, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 28/73 (38%), Gaps = 7/73 (9%) Query: 99 DVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156 D L +DA + ++ ++ I S D FT L L+ K V + + + Sbjct: 81 DSALIIDAMDILHTQKVDGFCIVSSDSDFTRLAIRLRESGKLVLGIGQKKTPKPFIA--- 137 Query: 157 RRQADYFMDLAYL 169 D F+ + L Sbjct: 138 --ACDKFIYIEIL 148 >gi|312198295|ref|YP_004018356.1| hypothetical protein FraEuI1c_4493 [Frankia sp. EuI1c] gi|311229631|gb|ADP82486.1| hypothetical protein FraEuI1c_4493 [Frankia sp. EuI1c] Length = 314 Score = 41.3 bits (96), Expect = 0.058, Method: Composition-based stats. Identities = 14/76 (18%), Positives = 29/76 (38%), Gaps = 8/76 (10%) Query: 99 DVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKV-TIVSTVLSDPSMASDQ 155 D+ L ++A + S + + S D FT L ++ V ++P + + Sbjct: 79 DMALVIEAMDLLHSGAFDGFCLVSSDSDFTRLAERIREAGLTVYGFGEERKTNPGLVA-- 136 Query: 156 LRRQADYFMDLAYLKN 171 D F+ + L + Sbjct: 137 ---ACDTFIFVETLID 149 >gi|295094936|emb|CBK84027.1| Uncharacterized conserved protein [Coprococcus sp. ART55/1] Length = 320 Score = 41.3 bits (96), Expect = 0.059, Method: Composition-based stats. Identities = 22/154 (14%), Positives = 49/154 (31%), Gaps = 27/154 (17%) Query: 49 YTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVA-------------------KEFTENC 89 Y ++ + + D L G V K+ + + Sbjct: 12 YAILIDSENVSAKYIESIFDELSRLGSITVRKIYGDWSKNNNGWDKDCLLSYSIQPVQQF 71 Query: 90 GRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLS 147 K+S D + +DA + + ++ + + D FT L + L+ K+V + + Sbjct: 72 SYTAGKNSTDSAMIIDAMDLLYTSNIDGFCLVTSDSDFTRLASRLREAGKQVIGMGERKT 131 Query: 148 DPSMASDQLRRQADYFMDLAYL-KNEIARDPDED 180 + S F L L ++ + ++ Sbjct: 132 PKAFVS-----ACTSFKILDSLVTEDLNKPASKN 160 >gi|229825159|ref|ZP_04451228.1| hypothetical protein GCWU000182_00510 [Abiotrophia defectiva ATCC 49176] gi|229790531|gb|EEP26645.1| hypothetical protein GCWU000182_00510 [Abiotrophia defectiva ATCC 49176] Length = 249 Score = 41.3 bits (96), Expect = 0.060, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 23/73 (31%), Gaps = 7/73 (9%) Query: 99 DVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156 D+ L +D + VI + D +T L L V V + Sbjct: 76 DMALVIDTMNLLHKGIYDCFVIVASDSDYTPLAINLHESGVYVIGVGEKK-----TPEAF 130 Query: 157 RRQADYFMDLAYL 169 R D F+ L L Sbjct: 131 RNSCDEFIFLENL 143 >gi|326436665|gb|EGD82235.1| hypothetical protein PTSG_02906 [Salpingoeca sp. ATCC 50818] Length = 210 Score = 41.3 bits (96), Expect = 0.062, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 40/118 (33%), Gaps = 15/118 (12%) Query: 57 EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVK-----------SSMDVELAVD 105 + LL + V + K F NC + + +DV + Sbjct: 72 RKADKSRKSLLRNMQQAHIAVHFRYLKPFRTNCEDVNCRYKSAAIEVPVGAGVDVAITTF 131 Query: 106 AFEQSEG-LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADY 162 A ++ +V+F D + L+ AL+ K +V +V+ + LR D Sbjct: 132 ALADMPTDVKTVVLFVTDPDYAPLIRALKGKGTRVLVVT---DSDAALDPALRDALDE 186 >gi|325267846|ref|ZP_08134496.1| protein of hypothetical function DUF88 [Kingella denitrificans ATCC 33394] gi|324980727|gb|EGC16389.1| protein of hypothetical function DUF88 [Kingella denitrificans ATCC 33394] Length = 244 Score = 41.3 bits (96), Expect = 0.063, Method: Composition-based stats. Identities = 31/176 (17%), Positives = 59/176 (33%), Gaps = 31/176 (17%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 +AL ID N A ID+ ++ + V+ Y D + + + LL Sbjct: 8 VALLIDADN------APAKKIDF--IMSELANYGSVMVRKIYGNWKDDRLKSWENV--LL 57 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCF 125 D+ ++F G+ D+ + +D + ++ + S D F Sbjct: 58 DY--------ALAPVQQFDYTKGKNAT----DMAMTIDVMDLLFLNKVDVFCLVSSDCDF 105 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 T L ++ K+V + L F+ L ++ A P E + Sbjct: 106 TPLAMRIKASGKQV-----IGFGEHKTPKSLVAACSKFLFLDNAQSRTA--PTEQQ 154 >gi|295839453|ref|ZP_06826386.1| conserved hypothetical protein [Streptomyces sp. SPB74] gi|197698733|gb|EDY45666.1| conserved hypothetical protein [Streptomyces sp. SPB74] Length = 420 Score = 41.3 bits (96), Expect = 0.063, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 58/147 (39%), Gaps = 18/147 (12%) Query: 25 GFDIDYRKLLKAFRSRAI------VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVV 78 +D+ L++ R RA ++R Y++ G P++ P H L +V Sbjct: 29 RITVDHAALIQRLRERAEEETGQPLLRIYWF---DGAPDRVPQPEHRRLRVRP----RVT 81 Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136 ++ T + GR K +D + + E + +V+ +GDG + + + Sbjct: 82 VRLG-ALTRSDGRWAQKG-VDAAMHAELTELARNRACSDVVLVTGDGDLLPGLVSAKEHG 139 Query: 137 KKVTIVSTVLSDPS-MASDQLRRQADY 162 V + + +D S+ L +AD Sbjct: 140 VAVHLWAVQAADGDYNQSEDLVAEADE 166 >gi|121635573|ref|YP_975818.1| hypothetical protein NMC1886 [Neisseria meningitidis FAM18] gi|161870771|ref|YP_001599944.1| hypothetical protein NMCC_1852 [Neisseria meningitidis 053442] gi|120867279|emb|CAM11050.1| conserved hypothetical protein [Neisseria meningitidis FAM18] gi|161596324|gb|ABX73984.1| conserved hypothetical protein [Neisseria meningitidis 053442] Length = 219 Score = 41.3 bits (96), Expect = 0.063, Method: Composition-based stats. Identities = 9/51 (17%), Positives = 21/51 (41%), Gaps = 1/51 (1%) Query: 87 ENCGRKRVKS-SMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKV 136 + + K M + L + + + + +++FSGD F +R+ Sbjct: 139 DVVLDVKQKGVDMRIGLDISSITLKKQADKIILFSGDSDFVPAAKLARREG 189 >gi|28897852|ref|NP_797457.1| hypothetical protein VP1078 [Vibrio parahaemolyticus RIMD 2210633] gi|153838031|ref|ZP_01990698.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ3810] gi|28806065|dbj|BAC59341.1| hypothetical protein [Vibrio parahaemolyticus RIMD 2210633] gi|149748565|gb|EDM59424.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ3810] Length = 249 Score = 41.3 bits (96), Expect = 0.063, Method: Composition-based stats. Identities = 27/139 (19%), Positives = 56/139 (40%), Gaps = 20/139 (14%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 IA++ID N+ AS D +++ +F S + T+ Q + L Sbjct: 17 IAVYIDMENIAAS------DFQLEEVMNSFLSADDEYNCIF--TIKSAYGNQATAKKSLK 68 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS----EGLEHLVIFSGDG 123 + + F ++ + + K+ D+ L++DAFE ++ + D Sbjct: 69 TQILEHNFNII--------DTPKIGKEKNRADLLLSLDAFESLHLDNPRVDRYCFMTTDS 120 Query: 124 CFTTLVAALQRKVKKVTIV 142 FT + L++ ++V +V Sbjct: 121 DFTVIADKLRKFGREVWLV 139 >gi|302404503|ref|XP_003000089.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102] gi|261361271|gb|EEY23699.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102] Length = 264 Score = 41.3 bits (96), Expect = 0.066, Method: Composition-based stats. Identities = 15/97 (15%), Positives = 30/97 (30%), Gaps = 11/97 (11%) Query: 75 FQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAAL 132 F + ++F G+ D + +DA + + + + S D FT L A + Sbjct: 42 FTQSIQPVQQFAYTSGKNAT----DSAMIIDAMDLLYTNRFDGFCLASSDSDFTRLAARI 97 Query: 133 QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 + V + + D F + Sbjct: 98 RESGLVVYGFGERKTPKPFVA-----ACDKFTHFENI 129 >gi|318057577|ref|ZP_07976300.1| hypothetical protein SSA3_06549 [Streptomyces sp. SA3_actG] Length = 436 Score = 41.3 bits (96), Expect = 0.067, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 58/147 (39%), Gaps = 18/147 (12%) Query: 25 GFDIDYRKLLKAFRSRAI------VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVV 78 +D+ L++ R RA ++R Y++ G P++ P H L +V Sbjct: 32 RITVDHAALIQRLRERAEEETGQPLLRIYWF---DGAPDRVPQPEHRRLRVRP----RVT 84 Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136 ++ T + GR K +D + + E + +V+ +GDG + + + Sbjct: 85 VRLG-ALTRSDGRWAQKG-VDAAMHAELTELARNRACSDIVLVTGDGDLLPGLVSAKEHG 142 Query: 137 KKVTIVSTVLSDPS-MASDQLRRQADY 162 V + + +D S+ L +AD Sbjct: 143 VAVHLWAVQAADGDYNQSEDLVAEADE 169 >gi|322434519|ref|YP_004216731.1| multi-sensor signal transduction histidine kinase [Acidobacterium sp. MP5ACTX9] gi|321162246|gb|ADW67951.1| multi-sensor signal transduction histidine kinase [Acidobacterium sp. MP5ACTX9] Length = 793 Score = 40.9 bits (95), Expect = 0.070, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 3/74 (4%) Query: 103 AVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKK-VTIVSTVLSDPSMASD--QLRRQ 159 D ++ + + SG+ F+ AA+ +K VT+V + M+++ LR Sbjct: 248 VTDILALAQRSDEPMYTSGESDFSLGTAAVIKKGSSAVTVVVGLPLPAGMSANMTSLRTA 307 Query: 160 ADYFMDLAYLKNEI 173 AD + LA + E+ Sbjct: 308 ADAYWRLARSRREV 321 >gi|255935257|ref|XP_002558655.1| Pc13g02120 [Penicillium chrysogenum Wisconsin 54-1255] gi|211583275|emb|CAP91281.1| Pc13g02120 [Penicillium chrysogenum Wisconsin 54-1255] Length = 259 Score = 40.9 bits (95), Expect = 0.070, Method: Composition-based stats. Identities = 14/73 (19%), Positives = 24/73 (32%), Gaps = 7/73 (9%) Query: 99 DVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156 D + +DA + S + + S D FT L A ++ V + + Sbjct: 78 DSAMIIDAMDLLYSNRYDGFCLVSSDSDFTRLAARIRESGLIVYGFGEQKTPKPFVA--- 134 Query: 157 RRQADYFMDLAYL 169 D F+ L Sbjct: 135 --ACDKFIYTENL 145 >gi|305665003|ref|YP_003861290.1| hypothetical protein FB2170_01831 [Maribacter sp. HTCC2170] gi|88707415|gb|EAQ99660.1| hypothetical protein FB2170_01831 [Maribacter sp. HTCC2170] Length = 255 Score = 40.9 bits (95), Expect = 0.070, Method: Composition-based stats. Identities = 21/98 (21%), Positives = 37/98 (37%), Gaps = 7/98 (7%) Query: 77 VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQR 134 V+ + A + G K++ D + +DA + S + + S D FT L L+ Sbjct: 53 VLLENAITPIQQYGYTSGKNATDSAMIIDAMDILYSGKVNGFCLVSSDSDFTRLATRLRE 112 Query: 135 KVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 +V + D D F+ + LKN+ Sbjct: 113 AGMQVFGIGEKK-----TPDPFIVACDKFIYIEILKNQ 145 >gi|296138104|ref|YP_003645347.1| hypothetical protein Tpau_0365 [Tsukamurella paurometabola DSM 20162] gi|296026238|gb|ADG77008.1| conserved hypothetical protein [Tsukamurella paurometabola DSM 20162] Length = 221 Score = 40.9 bits (95), Expect = 0.072, Method: Composition-based stats. Identities = 26/154 (16%), Positives = 53/154 (34%), Gaps = 16/154 (10%) Query: 25 GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKE 84 + ++Y L++ + A +T + + P ++ L G+ V AK Sbjct: 53 RWLLEYTAALESDTDSRLEPEATVFTNIAPGTADV---VRPWVEALRNVGYAVFAKPK-- 107 Query: 85 FTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC-FTTLVAALQRKVKKVTIVS 143 + D+ ++ GL L++ S DG F + + V ++ Sbjct: 108 -VDEDSDV----DADMLDHIEVRRYRPGLGGLLVASADGQAFREPLEEIAATGVPVKVLG 162 Query: 144 TVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 A+ L+ F+DL + R+P Sbjct: 163 F----REHAAWALQSPTLEFVDLEDIAGVF-REP 191 >gi|14520298|ref|NP_125773.1| hypothetical protein PAB0042 [Pyrococcus abyssi GE5] gi|5457513|emb|CAB49004.1| Conserved archaebacterial protein, DUF88 family [Pyrococcus abyssi GE5] Length = 191 Score = 40.9 bits (95), Expect = 0.072, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 65/163 (39%), Gaps = 32/163 (19%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 ++IAL +DG N+ K LG + +++A + A Q++P Sbjct: 26 KRIALLVDGPNILR--KELGVHL--EDIVEALSDLGNIRVAKVIL-------NQYAP-QS 73 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDG 123 L++ + GF+ V V + V+LAV+A + ++ + + + + Sbjct: 74 LIEAVSNQGFEPVI--------------VAGEIGVKLAVEAMREVYNPNIDIIALATRNT 119 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 F ++ + K K+ I+ S L+ ADY + L Sbjct: 120 EFVPIILKAKEKGKETAIIGVEPGF----SSALKHAADYVIVL 158 >gi|326440583|ref|ZP_08215317.1| hypothetical protein SclaA2_05933 [Streptomyces clavuligerus ATCC 27064] Length = 410 Score = 40.9 bits (95), Expect = 0.072, Method: Composition-based stats. Identities = 27/147 (18%), Positives = 57/147 (38%), Gaps = 18/147 (12%) Query: 25 GFDIDYRKLLKAFRS------RAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVV 78 +D+ L++ R ++R Y++ G P++ P H L + +V Sbjct: 29 RITVDHTALIQGLRELAERDTERPLLRIYWF---DGAPDRVPQPEHRRLRVMP----RVT 81 Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136 ++ T + GR K +D + + E + +V+ +GDG + + + Sbjct: 82 VRLG-ALTRSDGRWAQKG-VDAAMHAELTELARNRACSDVVLVTGDGDLLPGLMSAKEHG 139 Query: 137 KKVTIVSTVLSDPS-MASDQLRRQADY 162 V + + +D S+ L +AD Sbjct: 140 VAVHLWAVQAADGDYNQSEDLVAEADE 166 >gi|226326984|ref|ZP_03802502.1| hypothetical protein PROPEN_00844 [Proteus penneri ATCC 35198] gi|225204821|gb|EEG87175.1| hypothetical protein PROPEN_00844 [Proteus penneri ATCC 35198] Length = 264 Score = 40.9 bits (95), Expect = 0.073, Method: Composition-based stats. Identities = 20/94 (21%), Positives = 39/94 (41%), Gaps = 10/94 (10%) Query: 93 RVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS 150 R K +D++L VD ++ ++ +V+F+GD F + I + + + Sbjct: 157 RQKG-VDIKLGVDITSIAQKKLVDKIVLFAGDSDFVPAAKLARTNG----IDFVLDALRN 211 Query: 151 MASDQLRRQADYFM--DL-AYLKNEIARDPDEDK 181 + L D + DL A LK+ + + P Sbjct: 212 NIAPSLHEHIDGLVSYDLVAILKDILGKPPTTTP 245 >gi|307331652|ref|ZP_07610759.1| protein of unknown function DUF88 [Streptomyces violaceusniger Tu 4113] gi|306882678|gb|EFN13757.1| protein of unknown function DUF88 [Streptomyces violaceusniger Tu 4113] Length = 227 Score = 40.9 bits (95), Expect = 0.073, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 59/147 (40%), Gaps = 18/147 (12%) Query: 25 GFDIDYRKLLKAFRSRAI------VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVV 78 +D+ L++ R RA ++R Y++ G P++ P H L + +V Sbjct: 29 RISVDHATLIQGLRERAEAETECPLLRIYWF---DGAPDRVPQPEHRRLRVMP----RVT 81 Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136 ++ T + GR K +D + + E + +V+ +GDG + + + Sbjct: 82 VRLG-ALTRSDGRWAQKG-VDAAMHAELTELARNRACADIVLVTGDGDLLPGLMSAKEHG 139 Query: 137 KKVTIVSTVLSDPS-MASDQLRRQADY 162 V + + +D S+ L +AD Sbjct: 140 VAVHLWAVQAADGDYNQSEDLVAEADE 166 >gi|260361784|ref|ZP_05774809.1| conserved hypothetical protein [Vibrio parahaemolyticus K5030] gi|260877013|ref|ZP_05889368.1| conserved hypothetical protein [Vibrio parahaemolyticus AN-5034] gi|260899084|ref|ZP_05907525.1| conserved hypothetical protein [Vibrio parahaemolyticus Peru-466] gi|308089166|gb|EFO38861.1| conserved hypothetical protein [Vibrio parahaemolyticus Peru-466] gi|308093770|gb|EFO43465.1| conserved hypothetical protein [Vibrio parahaemolyticus AN-5034] gi|308113222|gb|EFO50762.1| conserved hypothetical protein [Vibrio parahaemolyticus K5030] Length = 240 Score = 40.9 bits (95), Expect = 0.073, Method: Composition-based stats. Identities = 27/139 (19%), Positives = 56/139 (40%), Gaps = 20/139 (14%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 IA++ID N+ AS D +++ +F S + T+ Q + L Sbjct: 8 IAVYIDMENIAAS------DFQLEEVMNSFLSADDEYNCIF--TIKSAYGNQATAKKSLK 59 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS----EGLEHLVIFSGDG 123 + + F ++ + + K+ D+ L++DAFE ++ + D Sbjct: 60 TQILEHNFNII--------DTPKIGKEKNRADLLLSLDAFESLHLDNPRVDRYCFMTTDS 111 Query: 124 CFTTLVAALQRKVKKVTIV 142 FT + L++ ++V +V Sbjct: 112 DFTVIADKLRKFGREVWLV 130 >gi|227488269|ref|ZP_03918585.1| conserved hypothetical protein [Corynebacterium glucuronolyticum ATCC 51867] gi|227091839|gb|EEI27151.1| conserved hypothetical protein [Corynebacterium glucuronolyticum ATCC 51867] Length = 237 Score = 40.9 bits (95), Expect = 0.074, Method: Composition-based stats. Identities = 10/63 (15%), Positives = 24/63 (38%), Gaps = 4/63 (6%) Query: 76 QVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQ 133 ++ K E + K +D+ + +D ++ + +V+ +GD F + Sbjct: 144 KIQVKDLTE-DDFSLDINQKG-VDMRIGLDIASLAQQGIVNQIVMITGDSDFVPAAKHAR 201 Query: 134 RKV 136 R Sbjct: 202 RMG 204 >gi|153832437|ref|ZP_01985104.1| conserved hypothetical protein [Vibrio harveyi HY01] gi|148871232|gb|EDL70104.1| conserved hypothetical protein [Vibrio harveyi HY01] Length = 241 Score = 40.9 bits (95), Expect = 0.074, Method: Composition-based stats. Identities = 27/139 (19%), Positives = 56/139 (40%), Gaps = 20/139 (14%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 IA++ID N+ AS D +++ +F S + T+ Q + L Sbjct: 9 IAVYIDMENIAAS------DFQLEEVMNSFLSADDEYNCIF--TIKSAYGNQATAKKSLK 60 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS----EGLEHLVIFSGDG 123 + + F ++ + + K+ D+ L++DAFE ++ + D Sbjct: 61 TQILEHNFNII--------DTQKIGKEKNRADLLLSLDAFESLHLDNPRVDRYCFMTTDS 112 Query: 124 CFTTLVAALQRKVKKVTIV 142 FT + L++ ++V +V Sbjct: 113 DFTVIADKLRKFGREVWLV 131 >gi|294812108|ref|ZP_06770751.1| DUF88 domain-containing protein [Streptomyces clavuligerus ATCC 27064] gi|294324707|gb|EFG06350.1| DUF88 domain-containing protein [Streptomyces clavuligerus ATCC 27064] Length = 413 Score = 40.9 bits (95), Expect = 0.077, Method: Composition-based stats. Identities = 27/147 (18%), Positives = 57/147 (38%), Gaps = 18/147 (12%) Query: 25 GFDIDYRKLLKAFRS------RAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVV 78 +D+ L++ R ++R Y++ G P++ P H L + +V Sbjct: 32 RITVDHTALIQGLRELAERDTERPLLRIYWF---DGAPDRVPQPEHRRLRVMP----RVT 84 Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136 ++ T + GR K +D + + E + +V+ +GDG + + + Sbjct: 85 VRLG-ALTRSDGRWAQKG-VDAAMHAELTELARNRACSDVVLVTGDGDLLPGLMSAKEHG 142 Query: 137 KKVTIVSTVLSDPS-MASDQLRRQADY 162 V + + +D S+ L +AD Sbjct: 143 VAVHLWAVQAADGDYNQSEDLVAEADE 169 >gi|83815599|ref|YP_445763.1| hypothetical protein SRU_1643 [Salinibacter ruber DSM 13855] gi|83756993|gb|ABC45106.1| hypothetical protein SRU_1643 [Salinibacter ruber DSM 13855] Length = 369 Score = 40.9 bits (95), Expect = 0.077, Method: Composition-based stats. Identities = 31/186 (16%), Positives = 69/186 (37%), Gaps = 26/186 (13%) Query: 4 PREKIALFIDGANLYA----------SSKALGFDIDYRKLLKAFRSRAIV--IRAYYYTT 51 P + A+F+D NLY+ S+ A +I + ++ + I Y T Sbjct: 11 PPRQAAMFVDYDNLYSILKSQSGRDRSTSAYAEEI-FEEVRRYLEEGDDTPTIYGRAYGT 69 Query: 52 VVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE 111 ++ +P+ LH G + + + ++ A + Sbjct: 70 FDTLLDENDAPVPS---ALHREGINPI-----HVPAGMQDNTSEVRLTLD-VTQALTRRS 120 Query: 112 GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD-YFMDLAYLK 170 L+ +VI +G+ + LV ++ + + + + +P +D D ++D L Sbjct: 121 DLQTVVIITGNRPYLPLVRWIREQGCRPLVAAV---NPPQTADTPSFAEDSRYLDARNLL 177 Query: 171 NEIARD 176 +E +R+ Sbjct: 178 SEESRE 183 >gi|52220908|ref|YP_086777.1| hypothetical protein pAgK84_22 [Agrobacterium tumefaciens] gi|222112727|ref|YP_002559314.1| hypothetical protein Arad_15022 [Agrobacterium radiobacter K84] gi|41393790|gb|AAS02138.1| hypothetical protein [Agrobacterium tumefaciens] gi|221728504|gb|ACM31476.1| conserved hypothetical protein [Agrobacterium radiobacter K84] Length = 275 Score = 40.9 bits (95), Expect = 0.078, Method: Composition-based stats. Identities = 16/96 (16%), Positives = 31/96 (32%), Gaps = 7/96 (7%) Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKK 138 + ++F G+ +M ++ A+D + I S D F L A ++ + Sbjct: 62 IQPVQQFAYTTGKNATDGAMIID-AMDLL-YTGRFSGFCIVSSDSDFARLAARIREQG-- 117 Query: 139 VTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 VT+ D F+ L + Sbjct: 118 VTVYGFGERK---TPRPFITACDKFVYFDVLNASVE 150 >gi|294507660|ref|YP_003571718.1| hypothetical protein SRM_01845 [Salinibacter ruber M8] gi|294343988|emb|CBH24766.1| conserved hypothetical protein [Salinibacter ruber M8] Length = 369 Score = 40.9 bits (95), Expect = 0.080, Method: Composition-based stats. Identities = 31/186 (16%), Positives = 69/186 (37%), Gaps = 26/186 (13%) Query: 4 PREKIALFIDGANLYA----------SSKALGFDIDYRKLLKAFRSRAIV--IRAYYYTT 51 P + A+F+D NLY+ S+ A +I + ++ + I Y T Sbjct: 11 PPRQAAMFVDYDNLYSILKSQSGRDRSTSAYAEEI-FEEVRRYLEEGDDTPTIYGRAYGT 69 Query: 52 VVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE 111 ++ +P+ LH G + + + ++ A + Sbjct: 70 FDTLLDENDAPVPS---ALHREGINPI-----HVPAGMQDNTSEVRLTLD-VTQALTRRS 120 Query: 112 GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD-YFMDLAYLK 170 L+ +VI +G+ + LV ++ + + + + +P +D D ++D L Sbjct: 121 DLQTVVIITGNRPYLPLVRWIREQGCRPLVAAV---NPPQTADTPSFAEDSRYLDARNLL 177 Query: 171 NEIARD 176 +E +R+ Sbjct: 178 SEESRE 183 >gi|333027817|ref|ZP_08455881.1| hypothetical protein STTU_5321 [Streptomyces sp. Tu6071] gi|332747669|gb|EGJ78110.1| hypothetical protein STTU_5321 [Streptomyces sp. Tu6071] Length = 434 Score = 40.9 bits (95), Expect = 0.084, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 58/147 (39%), Gaps = 18/147 (12%) Query: 25 GFDIDYRKLLKAFRSRAI------VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVV 78 +D+ L++ R RA ++R Y++ G P++ P H L +V Sbjct: 32 RITVDHAALIQRLRERAEEETGQPLLRIYWF---DGAPDRVPQPEHRRLRVRP----RVT 84 Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136 ++ T + GR K +D + + E + +V+ +GDG + + + Sbjct: 85 VRLG-ALTRSDGRWAQKG-VDAAMHAELTELARNRACSDVVLVTGDGDLLPGLVSAKEHG 142 Query: 137 KKVTIVSTVLSDPS-MASDQLRRQADY 162 V + + +D S+ L +AD Sbjct: 143 VAVHLWAVQAADGDYNQSEDLVAEADE 169 >gi|192361640|ref|YP_001984103.1| hypothetical protein CJA_3650 [Cellvibrio japonicus Ueda107] gi|190687805|gb|ACE85483.1| conserved hypothetical protein [Cellvibrio japonicus Ueda107] Length = 281 Score = 40.9 bits (95), Expect = 0.084, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 20/43 (46%), Gaps = 2/43 (4%) Query: 96 SSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKV 136 +D+ + VD + + ++ LV+ +GD F +R+ Sbjct: 189 KGVDMRIGVDIASLALKKQVDTLVLVAGDSDFVPAAKLARREG 231 >gi|114563957|ref|YP_751471.1| NAD(+) kinase [Shewanella frigidimarina NCIMB 400] gi|122299140|sp|Q07ZD2|PPNK_SHEFN RecName: Full=Probable inorganic polyphosphate/ATP-NAD kinase; Short=Poly(P)/ATP NAD kinase gi|114335250|gb|ABI72632.1| NAD(+) kinase [Shewanella frigidimarina NCIMB 400] Length = 309 Score = 40.9 bits (95), Expect = 0.085, Method: Composition-based stats. Identities = 19/75 (25%), Positives = 27/75 (36%), Gaps = 10/75 (13%) Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 L WL GF+V+ GR + DV ++D E E + ++ GDG Sbjct: 42 RLHHWLSMQGFKVIV---------EGRVSAELGADV-CSMDLLEMGEHCDLAIVVGGDGN 91 Query: 125 FTTLVAALQRKVKKV 139 L R V Sbjct: 92 MLGAARVLARFNVAV 106 >gi|291443977|ref|ZP_06583367.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Streptomyces roseosporus NRRL 15998] gi|291346924|gb|EFE73828.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Streptomyces roseosporus NRRL 15998] Length = 232 Score = 40.9 bits (95), Expect = 0.086, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 59/147 (40%), Gaps = 18/147 (12%) Query: 25 GFDIDYRKLLKAFRSRAI------VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVV 78 +D+ L++ R RA ++R Y++ G P++ P H L + +V Sbjct: 32 RITVDHAALIQGLRERAEADTQQPLLRIYWF---DGAPDRVPQPEHRRLRVMP----RVT 84 Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136 ++ T + GR K +D + + E + +V+ +GDG + + + Sbjct: 85 VRLG-ALTRSDGRWAQKG-VDAAMHAELTELARNRACSDVVLVTGDGDLLPGLMSAKEHG 142 Query: 137 KKVTIVSTVLSDPS-MASDQLRRQADY 162 V + + +D S+ L +AD Sbjct: 143 VAVHLWAVQAADGDYNQSEDLVAEADE 169 >gi|170691868|ref|ZP_02883032.1| conserved hypothetical protein [Burkholderia graminis C4D1M] gi|170143152|gb|EDT11316.1| conserved hypothetical protein [Burkholderia graminis C4D1M] Length = 242 Score = 40.5 bits (94), Expect = 0.089, Method: Composition-based stats. Identities = 11/63 (17%), Positives = 27/63 (42%), Gaps = 4/63 (6%) Query: 76 QVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQ 133 ++ +E + R K +D+ + VD + + ++ +V+ +GD F + Sbjct: 145 KIQMADLRE-DDVTIDIRQKG-VDMRIGVDVSSLAFKKQVDQIVLMAGDADFVPAAKQAR 202 Query: 134 RKV 136 R+ Sbjct: 203 REG 205 >gi|119715267|ref|YP_922232.1| hypothetical protein Noca_1026 [Nocardioides sp. JS614] gi|119535928|gb|ABL80545.1| hypothetical protein Noca_1026 [Nocardioides sp. JS614] Length = 207 Score = 40.5 bits (94), Expect = 0.10, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 8/64 (12%) Query: 101 ELAV-DAFEQ---SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156 ELA+ D ++ + +VI SGDG F L +R+ V V+ + S L Sbjct: 94 ELALLDGLNLTHAADRFDRVVIASGDGMFEDLAIEARRRGLHVHQVTGL----GRCSAAL 149 Query: 157 RRQA 160 R A Sbjct: 150 SRAA 153 >gi|229815424|ref|ZP_04445756.1| hypothetical protein COLINT_02472 [Collinsella intestinalis DSM 13280] gi|229808957|gb|EEP44727.1| hypothetical protein COLINT_02472 [Collinsella intestinalis DSM 13280] Length = 301 Score = 40.5 bits (94), Expect = 0.10, Method: Composition-based stats. Identities = 20/86 (23%), Positives = 32/86 (37%), Gaps = 7/86 (8%) Query: 99 DVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156 D + +DA + S ++ I S D FT LVA L+ V + + S Sbjct: 79 DSAMIIDAMDILYSGTVDGFAIVSSDSDFTRLVARLRESGMIVIGMGEQKTPKPFIS--- 135 Query: 157 RRQADYFMDLAYLKNEIARDPDEDKK 182 + F L L + + ED + Sbjct: 136 --ACNQFKYLDLLYAQRQDEESEDAQ 159 >gi|120401224|ref|YP_951053.1| hypothetical protein Mvan_0197 [Mycobacterium vanbaalenii PYR-1] gi|119954042|gb|ABM11047.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length = 239 Score = 40.5 bits (94), Expect = 0.10, Method: Composition-based stats. Identities = 29/116 (25%), Positives = 46/116 (39%), Gaps = 16/116 (13%) Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 P ++ L GF V AK + + LA A + EGL L++ S DG Sbjct: 108 RPWVEALRNVGFAVFAKPKVDEDSDVDSD--------MLAHIALRRGEGLAGLIVASADG 159 Query: 124 C-FTTLVAALQRKVKKVTIVSTVLSDP-SMASDQLRRQADYFMDLAYLKNEIARDP 177 F + + R +V ++ ++ASD L F+DL + R+P Sbjct: 160 QAFKLPLEDIARDGVEVQVLGFREHASWALASDTL-----EFVDLEDIPGVF-REP 209 >gi|194337430|ref|YP_002019224.1| hypothetical protein Ppha_2419 [Pelodictyon phaeoclathratiforme BU-1] gi|194309907|gb|ACF44607.1| conserved hypothetical protein [Pelodictyon phaeoclathratiforme BU-1] Length = 247 Score = 40.5 bits (94), Expect = 0.10, Method: Composition-based stats. Identities = 29/173 (16%), Positives = 56/173 (32%), Gaps = 29/173 (16%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 + E++A+ ID N A+ LL Y Sbjct: 4 EKTERLAVLIDADNTQATI--------IEGLLAEVAKYGTSSVKRIY---------GDWT 46 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 L W +V+ + + + + G + K++ D + +DA + + I S Sbjct: 47 STALRSW-----KEVLLEYSIQPIQQFGYTKGKNATDSAMIIDAMDLLYTGRFHGFCIVS 101 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 D FT L + ++ V + + S D F+ + L+ +I Sbjct: 102 SDSDFTKLASRIRESGLFVYGFGEKKTPSAFVS-----ACDKFIYIEVLRAKI 149 >gi|68535260|ref|YP_249965.1| hypothetical protein jk0195 [Corynebacterium jeikeium K411] gi|68262859|emb|CAI36347.1| hypothetical protein jk0195 [Corynebacterium jeikeium K411] Length = 245 Score = 40.5 bits (94), Expect = 0.10, Method: Composition-based stats. Identities = 19/121 (15%), Positives = 39/121 (32%), Gaps = 25/121 (20%) Query: 71 HYNGFQVVAKVAKEF------------TENCGRKRVKSSMDVELAVDAFEQSEG--LEHL 116 NG+ + K+ + K +D+ + +D +E + + Sbjct: 111 TQNGYMLKFAPLKKLCRGAISVDDLRLEDFYLDITQKG-VDMRIGLDIATMAERGIVTQI 169 Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 ++ SGD F +R I + + SD L+ D ++ + R Sbjct: 170 IMISGDSDFVPAAKHARRAG----IDFIIDPLWARISDSLKEHVD------GVRECVRRP 219 Query: 177 P 177 P Sbjct: 220 P 220 >gi|312620998|ref|YP_003993726.1| protein of unknown function duf88 [Photobacterium damselae subsp. damselae] gi|311872719|emb|CBX86813.1| protein of unknown function DUF88 [Photobacterium damselae subsp. damselae] Length = 222 Score = 40.5 bits (94), Expect = 0.11, Method: Composition-based stats. Identities = 31/161 (19%), Positives = 59/161 (36%), Gaps = 29/161 (18%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 IALF+D N + + F +++ R + + Y L Sbjct: 9 IALFVDADN----TSSSNFTF----VIEQLLKRGQIHYRHLY---------GNWTKPCLS 51 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE-QSEGLEHLV-IFSGDGCF 125 W +V A +F + K++ D+ + VD E H++ I + D F Sbjct: 52 SW-----HEVGQLHAAQFIQVFDLCSHKNASDIAMVVDILEWNQSHPNHVIAIMTSDSDF 106 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 T L+ L+R ++T+ + S L++ F+ + Sbjct: 107 TPLLNQLRR-----HQITTIGIGNANCSIHLQKSFSSFIPI 142 >gi|15679075|ref|NP_276192.1| hypothetical protein MTH1064 [Methanothermobacter thermautotrophicus str. Delta H] gi|2622162|gb|AAB85553.1| conserved protein [Methanothermobacter thermautotrophicus str. Delta H] Length = 155 Score = 40.5 bits (94), Expect = 0.11, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 6/75 (8%) Query: 94 VKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSM 151 V +DV+LAV+AFE ++ + I + + F L+ + K+ ++ Sbjct: 80 VAGDVDVQLAVEAFELIHNPNIDVVAIMTRNADFLPLINIAKENGKETLVIGAEPGF--- 136 Query: 152 ASDQLRRQADYFMDL 166 S L+ AD + L Sbjct: 137 -SIALQNSADDSIIL 150 >gi|282862137|ref|ZP_06271200.1| protein of unknown function DUF88 [Streptomyces sp. ACTE] gi|282563162|gb|EFB68701.1| protein of unknown function DUF88 [Streptomyces sp. ACTE] Length = 415 Score = 40.5 bits (94), Expect = 0.11, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 59/147 (40%), Gaps = 18/147 (12%) Query: 25 GFDIDYRKLLKAFRSRAI------VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVV 78 +D+ L++ R RA ++R Y++ G P++ P H L + +V Sbjct: 29 RITVDHAALIQGLRLRAEADTEQPLLRIYWF---DGAPDRVPQPEHRRLRVMP----RVT 81 Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136 ++ T + GR K +D + + E + +V+ +GDG + + + Sbjct: 82 VRLG-ALTRSDGRWAQKG-VDAAMHAELTELARNRACSDVVLVTGDGDLLPGLMSAKEHG 139 Query: 137 KKVTIVSTVLSDPS-MASDQLRRQADY 162 V + + +D S+ L +AD Sbjct: 140 VAVHLWAVQAADGDYNQSEDLVAEADE 166 >gi|156602934|ref|XP_001618742.1| hypothetical protein NEMVEDRAFT_v1g224852 [Nematostella vectensis] gi|156200154|gb|EDO26642.1| predicted protein [Nematostella vectensis] Length = 343 Score = 40.5 bits (94), Expect = 0.11, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 34/102 (33%), Gaps = 12/102 (11%) Query: 71 HYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVA 130 GF ++ + + E + K +MD+ S + + S D FT L Sbjct: 158 RNLGFAIIDEQHRFGVEQRSKLWKKDAMDI-------LYSGKVTGFCLVSSDSDFTRLAT 210 Query: 131 ALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 L+ +V + + D F+ + LK E Sbjct: 211 RLREAGMEVIGIGEKKTPHPF-----IVACDKFIYIEILKKE 247 >gi|121608659|ref|YP_996466.1| hypothetical protein Veis_1693 [Verminephrobacter eiseniae EF01-2] gi|121553299|gb|ABM57448.1| conserved hypothetical protein [Verminephrobacter eiseniae EF01-2] Length = 236 Score = 40.5 bits (94), Expect = 0.11, Method: Composition-based stats. Identities = 11/62 (17%), Positives = 26/62 (41%), Gaps = 3/62 (4%) Query: 78 VAKVAKEFTENCGRKRVK-SSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQR 134 + +E TE V+ +D+ + +D + ++ +V+ +GD F +R Sbjct: 130 KKRKFEELTEGDLLPNVRQKGVDMRIGIDIASLAFKRQVDQIVLVAGDADFVPAAKLARR 189 Query: 135 KV 136 + Sbjct: 190 EG 191 >gi|302561149|ref|ZP_07313491.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000] gi|302478767|gb|EFL41860.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000] Length = 184 Score = 40.1 bits (93), Expect = 0.12, Method: Composition-based stats. Identities = 30/147 (20%), Positives = 59/147 (40%), Gaps = 18/147 (12%) Query: 25 GFDIDYRKLLKAFRSRAI------VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVV 78 +D+ L++ R RA ++R Y++ G P++ P H L + +V Sbjct: 29 RITVDHAALIQGLRERAESDTRQPLLRIYWF---DGAPDRVPQPEHRRLRVMP----RVT 81 Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136 ++ T + GR K +D + + E + +V+ +GDG + A + Sbjct: 82 VRLG-ALTRSDGRWAQKG-VDAAMHAELTELARNRACSDIVLVTGDGDLLPGMMAAKEHG 139 Query: 137 KKVTIVSTVLSDPS-MASDQLRRQADY 162 V + + +D S+ L +AD Sbjct: 140 VAVHLWAVQAADGDYNQSEDLVAEADE 166 >gi|271965410|ref|YP_003339606.1| hypothetical protein Sros_3953 [Streptosporangium roseum DSM 43021] gi|270508585|gb|ACZ86863.1| hypothetical protein Sros_3953 [Streptosporangium roseum DSM 43021] Length = 148 Score = 40.1 bits (93), Expect = 0.12, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 4/59 (6%) Query: 109 QSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 ++ E +VI SGDG F L + V +VS P + +LRR A + L Sbjct: 91 LADRFERVVIGSGDGIFADFAGWLSGRGVLVVVVS----RPESLNRRLRRTAAQVISLD 145 >gi|296130250|ref|YP_003637500.1| hypothetical protein Cfla_2411 [Cellulomonas flavigena DSM 20109] gi|296022065|gb|ADG75301.1| conserved hypothetical protein [Cellulomonas flavigena DSM 20109] Length = 187 Score = 40.1 bits (93), Expect = 0.12, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 57/164 (34%), Gaps = 33/164 (20%) Query: 10 LFIDGANLYASSKALGFDI-----------DYRKLLKAFRSR-AIVIRAYYYTTVVGDPE 57 L +DG N+ A+ LG I + ++L + ++A ++ Sbjct: 9 LLVDGENIDAT---LGSSILGGRPTPEQRPRWERVLTFAQQAWGQPVKALFFL-----NA 60 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLV 117 + + L GF + G K +D+ + ++ ++ Sbjct: 61 SNGTLPMSFVQALTAIGFVPI--------PLSGESYEKV-VDIGIKRTLEAIADRDGDVL 111 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVS----TVLSDPSMASDQLR 157 + S DG F VA L ++V +++ T S + + LR Sbjct: 112 LASHDGDFAPEVAQLVDAGRQVGLLAFREFTSQSLAGLTARGLR 155 >gi|160896436|ref|YP_001562018.1| hypothetical protein Daci_0987 [Delftia acidovorans SPH-1] gi|160362020|gb|ABX33633.1| conserved hypothetical protein [Delftia acidovorans SPH-1] Length = 234 Score = 40.1 bits (93), Expect = 0.12, Method: Composition-based stats. Identities = 37/166 (22%), Positives = 54/166 (32%), Gaps = 43/166 (25%) Query: 7 KIALFIDGANLYASSKA---LGFDIDYRKLLKAFRSR--------AIVIRAYYYTTVVGD 55 + ++IDG NLY S + +D L FR R A V+ Y+T V Sbjct: 8 RTTIYIDGYNLYYSRLKGTPYKW-LDIAAL---FRDRILLPQDPGAEVVAIKYFTAPVKA 63 Query: 56 P-----EQQFSPLHPLLDWLHY---------NGFQVVAKVAKEFTENCGRKRVKSSM--- 98 E L L NGF V + G K+++ Sbjct: 64 SYARHGEASVQAQTQYLRALQARDPGLIQIVNGFHVFE-PTSLPSYQAGANPSKNNVSRV 122 Query: 99 --------DVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQR 134 DV LA+ A+ + + LVI S D + L+ Sbjct: 123 WMIEEKQTDVNLALHAYRDAVRGECDQLVICSNDSDVEPALRMLRE 168 >gi|194334672|ref|YP_002016532.1| hypothetical protein Paes_1873 [Prosthecochloris aestuarii DSM 271] gi|194312490|gb|ACF46885.1| conserved hypothetical protein [Prosthecochloris aestuarii DSM 271] Length = 252 Score = 40.1 bits (93), Expect = 0.12, Method: Composition-based stats. Identities = 31/174 (17%), Positives = 62/174 (35%), Gaps = 31/174 (17%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 + +++A+ ID N AS ID LL + +V SP Sbjct: 4 EKSQRLAVLIDADNTQASI------ID--GLLSEIAKYGV-------ASVRRIYGDWTSP 48 Query: 63 LHPLLDWLHYNGFQ-VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIF 119 L G++ ++ + + + + G + K++ D + +DA + + + I Sbjct: 49 LLK--------GWKEILLEHSIQPIQQFGYTKGKNATDSAMIIDAMDLLYTGKFDGFCIV 100 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 S D FT L + ++ V + S D F+ + L+ + Sbjct: 101 SSDSDFTKLASRIRESGLFVFGFGEKKTPSPFVS-----ACDKFIYIEVLRARV 149 >gi|302131135|ref|ZP_07257125.1| hypothetical protein PsyrptN_07055 [Pseudomonas syringae pv. tomato NCPPB 1108] Length = 170 Score = 40.1 bits (93), Expect = 0.12, Method: Composition-based stats. Identities = 11/55 (20%), Positives = 20/55 (36%), Gaps = 5/55 (9%) Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 + S D FT L + L+ + V S + D F+ + L+ + Sbjct: 80 LVSSDSDFTRLASRLREEGLTVYGFGEEKSPKPFVA-----ACDKFIYIELLRGD 129 >gi|241664407|ref|YP_002982767.1| hypothetical protein Rpic12D_2825 [Ralstonia pickettii 12D] gi|240866434|gb|ACS64095.1| conserved hypothetical protein [Ralstonia pickettii 12D] Length = 244 Score = 40.1 bits (93), Expect = 0.12, Method: Composition-based stats. Identities = 10/52 (19%), Positives = 23/52 (44%), Gaps = 3/52 (5%) Query: 87 ENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKV 136 + R K +D+ + VD + + ++ +V+ +GD F +R+ Sbjct: 153 DVTVDVRQKG-VDMRIGVDVSSLAFKQQVDQIVLIAGDADFVPAAKQARREG 203 >gi|318078652|ref|ZP_07985984.1| hypothetical protein SSA3_18541 [Streptomyces sp. SA3_actF] Length = 229 Score = 40.1 bits (93), Expect = 0.12, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 58/147 (39%), Gaps = 18/147 (12%) Query: 25 GFDIDYRKLLKAFRSRAI------VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVV 78 +D+ L++ R RA ++R Y++ G P++ P H L +V Sbjct: 32 RITVDHAALIQRLRERAEEETGQPLLRIYWF---DGAPDRVPQPEHRRLRVRP----RVT 84 Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136 ++ T + GR K +D + + E + +V+ +GDG + + + Sbjct: 85 VRLG-ALTRSDGRWAQKG-VDAAMHAELTELARNRACSDIVLVTGDGDLLPGLVSAKEHG 142 Query: 137 KKVTIVSTVLSDPS-MASDQLRRQADY 162 V + + +D S+ L +AD Sbjct: 143 VAVHLWAVQAADGDYNQSEDLVAEADE 169 >gi|328955609|ref|YP_004372942.1| hypothetical protein Corgl_1019 [Coriobacterium glomerans PW2] gi|328455933|gb|AEB07127.1| hypothetical protein Corgl_1019 [Coriobacterium glomerans PW2] Length = 310 Score = 40.1 bits (93), Expect = 0.12, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 28/73 (38%), Gaps = 7/73 (9%) Query: 99 DVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156 D + +DA + S ++ I S D FT LVA L+ +V + + S Sbjct: 80 DSAMIIDAMDILYSGTVDGFTIVSSDSDFTRLVARLRESGMQVIGMGEQKTPEPFIS--- 136 Query: 157 RRQADYFMDLAYL 169 + F L L Sbjct: 137 --ACNQFKYLDLL 147 >gi|237751560|ref|ZP_04582040.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879] gi|229372926|gb|EEO23317.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879] Length = 248 Score = 40.1 bits (93), Expect = 0.12, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 56/163 (34%), Gaps = 30/163 (18%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 IA+ D N+ ++ I + +L+ + V+ Y + D +Q ++ Sbjct: 2 IAILFDCENVSST------HIPF--ILQRLKRFGKVVLKYAF----KDWSRQSDWTQQVV 49 Query: 68 DWLHYNGFQV-VAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126 + QV K K ++ + ++ + +EH+ I S D F Sbjct: 50 EEYGMIPIQVFRHKNFKNTSD----------LKIQASAYKILYESNIEHICIVSSDSDFR 99 Query: 127 TLVAALQRKVKKVTIVSTVLSDPSM-ASDQLRRQADYFMDLAY 168 + +Q K K + M + L+ +F+ L Sbjct: 100 DIALEIQAKGK------ISIGFGEMKTPESLQNAYTHFIHLQS 136 >gi|296284143|ref|ZP_06862141.1| hypothetical protein CbatJ_10981 [Citromicrobium bathyomarinum JL354] Length = 245 Score = 40.1 bits (93), Expect = 0.12, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 29/73 (39%), Gaps = 6/73 (8%) Query: 99 DVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156 D+ + +DA + ++ I S D FT LV L++ V + P+ Sbjct: 81 DMAMTIDAIDLLYQGKVDGFGIMSSDSDFTPLVTRLRQDGLVVYGFGSTNKTPA----AF 136 Query: 157 RRQADYFMDLAYL 169 + F+D+ L Sbjct: 137 KSACTRFIDIDAL 149 >gi|312898144|ref|ZP_07757535.1| conserved hypothetical protein [Megasphaera micronuciformis F0359] gi|310620641|gb|EFQ04210.1| conserved hypothetical protein [Megasphaera micronuciformis F0359] Length = 281 Score = 40.1 bits (93), Expect = 0.13, Method: Composition-based stats. Identities = 31/175 (17%), Positives = 56/175 (32%), Gaps = 29/175 (16%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 K+A+ ID N+ ID +L + ++ Y + Sbjct: 6 KLAVLIDAENI------SNKYID--VILSEANNLGNIVYKRIY------GNWTTPQMASW 51 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGC 124 + + N Q ++++ K+S D L +D + L+ I S D Sbjct: 52 KNIILDNAIQ----PIQQYS----NTIRKNSSDSALIIDTMDLLYQSDLDAYCIVSSDSD 103 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 FT L + L+ + + S + F+ L L E +P E Sbjct: 104 FTRLASRLRE-----SQKYVLGMGESKTPRSFISACNKFLYLDVLFEEACEEPVE 153 >gi|225018409|ref|ZP_03707601.1| hypothetical protein CLOSTMETH_02356 [Clostridium methylpentosum DSM 5476] gi|224948827|gb|EEG30036.1| hypothetical protein CLOSTMETH_02356 [Clostridium methylpentosum DSM 5476] Length = 246 Score = 40.1 bits (93), Expect = 0.13, Method: Composition-based stats. Identities = 34/171 (19%), Positives = 56/171 (32%), Gaps = 29/171 (16%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 + KIA+ ID N+ S K + + +L + Y Q Sbjct: 2 EQERKIAVLIDADNV--SQKYIKY------ILDEIAKHGLPTYKRIY--GDWTSPQLARW 51 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 LLD + + ++++ G K+S D L +DA + S + I S Sbjct: 52 KDVLLD------YSIT--PIQQYSYTAG----KNSTDSALIIDAMDILYSHNINGFCIVS 99 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 D FT LV L+ V + + + + F L L Sbjct: 100 SDSDFTRLVVRLRESGMYVVGMGEKKTPKPFIA-----ACEQFKYLEALAQ 145 >gi|150003300|ref|YP_001298044.1| hypothetical protein BVU_0716 [Bacteroides vulgatus ATCC 8482] gi|160890159|ref|ZP_02071162.1| hypothetical protein BACUNI_02599 [Bacteroides uniformis ATCC 8492] gi|149931724|gb|ABR38422.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482] gi|156860547|gb|EDO53978.1| hypothetical protein BACUNI_02599 [Bacteroides uniformis ATCC 8492] Length = 240 Score = 40.1 bits (93), Expect = 0.13, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 24/68 (35%), Gaps = 7/68 (10%) Query: 99 DVELAVDAFEQSE--GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156 D+ L +DA + ++ + + DG + L ++ KV + L Sbjct: 80 DIALVIDAMDILRDGRVDCFCLVASDGDYNPLAQRIREAGLKV-----LGYGEGKTPVSL 134 Query: 157 RRQADYFM 164 R F+ Sbjct: 135 IRSCSVFL 142 >gi|257898759|ref|ZP_05678412.1| phosphoribosylaminoimidazole carboxylase [Enterococcus faecium Com15] gi|257836671|gb|EEV61745.1| phosphoribosylaminoimidazole carboxylase [Enterococcus faecium Com15] Length = 374 Score = 40.1 bits (93), Expect = 0.13, Method: Composition-based stats. Identities = 26/146 (17%), Positives = 51/146 (34%), Gaps = 28/146 (19%) Query: 31 RKLLKA-FRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENC 89 +LL+ F ++ A Y T V + D + G+ V K + + Sbjct: 106 DRLLEKSFLETNNIVIAPYATIVSPTD---------IQDAIDGIGYPCVLKTTRGGYDGK 156 Query: 90 GRKRVKSSMDVELAVDAFEQSEGLEHLVI-----------FSGDGCFT--TLVAALQRKV 136 G+ +KS D+ A+D + + I +G G FT +V + R Sbjct: 157 GQYVLKSRADLAPAMDLLREGTCVLEAWIPFEKEISIMVAGNGQGDFTTFPVVENIHRNN 216 Query: 137 KKVTIVSTVLSDPSMASDQLRRQADY 162 ++ P+ + + +A+ Sbjct: 217 ILHETIA-----PAAIAQDVIEEAER 237 >gi|58583681|ref|YP_202697.1| hypothetical protein XOO4058 [Xanthomonas oryzae pv. oryzae KACC10331] gi|58428275|gb|AAW77312.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae KACC10331] Length = 84 Score = 40.1 bits (93), Expect = 0.13, Method: Composition-based stats. Identities = 9/45 (20%), Positives = 20/45 (44%), Gaps = 1/45 (2%) Query: 93 RVKS-SMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKV 136 R K M + + + + ++ +V+F+GD F +R+ Sbjct: 2 RQKGVDMRIGIDISSLALKHQVDQIVLFAGDADFVPAAKLARREG 46 >gi|255012325|ref|ZP_05284451.1| hypothetical protein B2_00320 [Bacteroides sp. 2_1_7] Length = 240 Score = 40.1 bits (93), Expect = 0.13, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 24/68 (35%), Gaps = 7/68 (10%) Query: 99 DVELAVDAFEQSE--GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156 D+ L +DA + ++ + + DG + L ++ KV + L Sbjct: 80 DIALVIDAMDILRDGRVDCFCLVASDGDYNPLAQRIREAGLKV-----LGYGEGKTPVSL 134 Query: 157 RRQADYFM 164 R F+ Sbjct: 135 IRSCSVFL 142 >gi|332829851|gb|EGK02493.1| hypothetical protein HMPREF9455_01450 [Dysgonomonas gadei ATCC BAA-286] Length = 251 Score = 40.1 bits (93), Expect = 0.13, Method: Composition-based stats. Identities = 28/167 (16%), Positives = 54/167 (32%), Gaps = 29/167 (17%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 K+A+ ID N+ S + + +L I Y PL Sbjct: 8 KLAVLIDADNIPYS--------NIKGMLDEITKFGIPTIKRIY--GDWTKPSVSGWKQPL 57 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGC 124 L+ + ++++ G+ D + +DA + S+ ++ + S D Sbjct: 58 LE-------HAIT-PIQQYSYTTGKNAT----DSAMIIDAMDILHSDKVDGFCLVSSDSD 105 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 FT L L+ V + + D F+ + L+N Sbjct: 106 FTRLAVRLRESGMFVLGLGEKKTPNPF-----IVACDKFIYIEILEN 147 >gi|239817540|ref|YP_002946450.1| hypothetical protein Vapar_4578 [Variovorax paradoxus S110] gi|239804117|gb|ACS21184.1| protein of unknown function DUF88 [Variovorax paradoxus S110] Length = 527 Score = 40.1 bits (93), Expect = 0.13, Method: Composition-based stats. Identities = 34/195 (17%), Positives = 67/195 (34%), Gaps = 37/195 (18%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP---- 62 KIALF+D N+Y+ + + + + F + + ++ T G+ S Sbjct: 2 KIALFVDFDNVYSGLRRISAE-----AAERFSRQPLRWLSWLTTGADGENIDDTSRDRRR 56 Query: 63 ------------LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110 H GF++V K+S D+ L +D + Sbjct: 57 VLVRRCYLNPVMYQKYRRPFHEAGFEIVDCPPM-------TATGKTSTDIHLVLDTMDAL 109 Query: 111 ---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 + ++FS D F+ ++ + TV+ S+ + AD +D+ Sbjct: 110 LDDTHFDEFIVFSADADFSPVLRR-----LRRHDRRTVVFAAGAMSESYKASADRVIDIQ 164 Query: 168 Y-LKNEIARDPDEDK 181 L + + ED+ Sbjct: 165 TFLHDALELPSAEDE 179 >gi|332158254|ref|YP_004423533.1| hypothetical protein PNA2_0613 [Pyrococcus sp. NA2] gi|331033717|gb|AEC51529.1| hypothetical protein PNA2_0613 [Pyrococcus sp. NA2] Length = 194 Score = 40.1 bits (93), Expect = 0.13, Method: Composition-based stats. Identities = 37/188 (19%), Positives = 71/188 (37%), Gaps = 41/188 (21%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 ++IAL +DG N+ K LG + +++A + A Q++P Sbjct: 26 KRIALLVDGPNILR--KELGIHL--EDIVEALSKLGNIRVAKVIL-------NQYAP-QS 73 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDG 123 L++ + GF+ V V + V+LAV+A + ++ L + + + Sbjct: 74 LIEAVSNQGFEPVI--------------VAGEIGVKLAVEAMREVYNPNIDILALATRNT 119 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA---------YLKNEIA 174 F ++ + K K+ I+ S L+ ADY + L K+ Sbjct: 120 EFVPIILKAKEKGKETAIIGVEPGF----SSALKHAADYVIILEPRGEVSEERDFKDIEE 175 Query: 175 RDPDEDKK 182 RD ++ Sbjct: 176 RDGRRKER 183 >gi|162148603|ref|YP_001603064.1| hypothetical protein GDI_2830 [Gluconacetobacter diazotrophicus PAl 5] gi|161787180|emb|CAP56773.1| hypothetical protein GDI2830 [Gluconacetobacter diazotrophicus PAl 5] Length = 199 Score = 40.1 bits (93), Expect = 0.13, Method: Composition-based stats. Identities = 29/192 (15%), Positives = 61/192 (31%), Gaps = 40/192 (20%) Query: 5 REKIALFIDGANLYASSKAL---------GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGD 55 +++ + D +N++ S ++ GF I + L+ + + + +V Sbjct: 2 NDRVHIIWDNSNIFHSGRSTGDILERRTDGFRIYFENLIDLAADGRPIEQVFCVGSVPPP 61 Query: 56 PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGL-- 113 + + L K + F R ++ +D L V Sbjct: 62 TNSVWGHIERL-----------TGKKPELFERGAASGREQA-VDQALQVRMLRLGFDYRP 109 Query: 114 -EHLVIFSGDGC--------FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADY-- 162 E +V+ +GDG F L KV +++ ++R A+ Sbjct: 110 PETIVLLTGDGSGYEDGTGFFADA-ERLHNFGWKVEVLAWQNHCK----REMRNWAETNG 164 Query: 163 -FMDLAYLKNEI 173 F+ L + I Sbjct: 165 VFVPLDDFYSSI 176 >gi|21244544|ref|NP_644126.1| hypothetical protein XAC3820 [Xanthomonas axonopodis pv. citri str. 306] gi|21110218|gb|AAM38662.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri str. 306] Length = 268 Score = 40.1 bits (93), Expect = 0.14, Method: Composition-based stats. Identities = 27/172 (15%), Positives = 53/172 (30%), Gaps = 29/172 (16%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 + ++IAL ID N + A D+ ++ + + + + + E Sbjct: 6 NADKRIALLIDADN----APAGKIDVVLAEVARYGVANVRRAYGNWKSPHLKGWEAALHD 61 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 + ++F + G+ D+ + +DA + + L+ I S Sbjct: 62 Y--------------AIRPIQQFAYSSGKNAS----DMAMVIDAMDLLYARNLDGFAIVS 103 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 D FT LV L KV + F + L + Sbjct: 104 SDADFTPLVMRLLTDGMKVYGFGEKKTPAPFV-----NACSKFTYVEALGEQ 150 >gi|167766019|ref|ZP_02438072.1| hypothetical protein CLOSS21_00511 [Clostridium sp. SS2/1] gi|317499424|ref|ZP_07957691.1| hypothetical protein HMPREF0996_02675 [Lachnospiraceae bacterium 5_1_63FAA] gi|167712099|gb|EDS22678.1| hypothetical protein CLOSS21_00511 [Clostridium sp. SS2/1] gi|316893296|gb|EFV15511.1| hypothetical protein HMPREF0996_02675 [Lachnospiraceae bacterium 5_1_63FAA] Length = 319 Score = 40.1 bits (93), Expect = 0.14, Method: Composition-based stats. Identities = 18/108 (16%), Positives = 42/108 (38%), Gaps = 9/108 (8%) Query: 68 DWLHYNGF--QVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDG 123 +W NG+ +++ + + + K++ D+ + +DA + + ++ I + D Sbjct: 48 NWSKANGWNEELLLEYSIIPVQQFSYTSGKNATDMAMVIDAMDLLYGKKVDGFCIVTSDS 107 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 FT L L+ + + S L R + F+ L + Sbjct: 108 DFTRLAMRLRE-----EHMYVIGMGESKTPVALTRACNKFIHLNLIYE 150 >gi|300871590|ref|YP_003786463.1| hypothetical protein BP951000_1984 [Brachyspira pilosicoli 95/1000] gi|300689291|gb|ADK31962.1| conserved hypothetical protein [Brachyspira pilosicoli 95/1000] Length = 260 Score = 40.1 bits (93), Expect = 0.14, Method: Composition-based stats. Identities = 26/145 (17%), Positives = 64/145 (44%), Gaps = 16/145 (11%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 ++I ++ID N+ L F+++++ +L+ +Y + + D + +S Sbjct: 1 MKRIGIYIDLENIAH----LKFNVNFKLILEDIIK--------FYRSNLKDKDIYYSIKK 48 Query: 65 PLLDWLHYNGFQVVAKVA-KEFTENCGRKRVKSSMDVELAVDAFE---QSEGLEHLVIFS 120 D ++ + + + + K+ D+ ++DAFE ++ ++ +V S Sbjct: 49 AYGDNKSIKLYEKELRDLHIDIIHSVHINKAKNMSDMISSIDAFEDFVFNKNIDIIVFVS 108 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTV 145 D +T ++ L+R IV+T+ Sbjct: 109 RDVDYTIVMERLKRHGAIAAIVTTI 133 >gi|291559982|emb|CBL38782.1| Uncharacterized conserved protein [butyrate-producing bacterium SSC/2] Length = 315 Score = 40.1 bits (93), Expect = 0.14, Method: Composition-based stats. Identities = 18/108 (16%), Positives = 42/108 (38%), Gaps = 9/108 (8%) Query: 68 DWLHYNGF--QVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDG 123 +W NG+ +++ + + + K++ D+ + +DA + + ++ I + D Sbjct: 44 NWSKANGWNEELLLEYSIIPVQQFSYTSGKNATDMAMVIDAMDLLYGKKVDGFCIVTSDS 103 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 FT L L+ + + S L R + F+ L + Sbjct: 104 DFTRLAMRLRE-----EHMYVIGMGESKTPVALTRACNKFIHLNLIYE 146 >gi|227824978|ref|ZP_03989810.1| conserved hypothetical protein [Acidaminococcus sp. D21] gi|226905477|gb|EEH91395.1| conserved hypothetical protein [Acidaminococcus sp. D21] Length = 262 Score = 40.1 bits (93), Expect = 0.14, Method: Composition-based stats. Identities = 39/176 (22%), Positives = 60/176 (34%), Gaps = 29/176 (16%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 + +K AL ID N+ S ID +L + VI Y Q S Sbjct: 2 EQDKKFALLIDAENI---SPQY---IDI--ILSEANNLGNVIYKRIY--GNWTSPQMGSW 51 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFS 120 +LD + ++++ G K+S D L +D + L+ I S Sbjct: 52 KSTILDN--------AIQPVQQYSNTSG----KNSSDSALIIDTMDLLYRTQLDGFCIVS 99 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 D FT L + L+ K V + S + F+ L L E R+ Sbjct: 100 SDSDFTRLASRLRESDKYV-----LGMGESKTPRSFISACNRFLYLDVLYAESKRE 150 >gi|116672106|ref|YP_833039.1| hypothetical protein Arth_3564 [Arthrobacter sp. FB24] gi|116612215|gb|ABK04939.1| hypothetical protein Arth_3564 [Arthrobacter sp. FB24] Length = 415 Score = 40.1 bits (93), Expect = 0.14, Method: Composition-based stats. Identities = 36/184 (19%), Positives = 68/184 (36%), Gaps = 15/184 (8%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 P + A+F+D N+Y AL D + A + ++F Sbjct: 11 PGIRAAMFVDFDNVYTGLLAL----DPLAAKRFAEDPKHWADALS-AGGSAESSRRFLIR 65 Query: 64 HPLLDWLHYNGFQVV-AKVAKEFTE-NCGRKRVKSSMDVEL---AVDAFEQSEGLEHLVI 118 + L+ + Y+ ++ + + +R KSS D+ L A+DA S G++ I Sbjct: 66 NCYLNPVVYSKYRTYWTRAGFRVIDCPSLTQRGKSSTDINLVLDAMDALSGSAGIDEFFI 125 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178 S D FT+L+ + K T+++ + R AD ++ + Sbjct: 126 ASADADFTSLIQRFRAADKMTTVIAA-----GAVAFAYREMADSVVESHDFVAILNGTTA 180 Query: 179 EDKK 182 E + Sbjct: 181 EPIR 184 >gi|145221059|ref|YP_001131737.1| hypothetical protein Mflv_0455 [Mycobacterium gilvum PYR-GCK] gi|145213545|gb|ABP42949.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK] Length = 237 Score = 40.1 bits (93), Expect = 0.15, Method: Composition-based stats. Identities = 27/112 (24%), Positives = 43/112 (38%), Gaps = 15/112 (13%) Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 P ++ L GF V AK + D+ LA A +GL L++ S DG Sbjct: 106 RPWVEALRNVGFAVFAKPKI---DEDSDV----DSDM-LAHIALRNEQGLAGLIVASADG 157 Query: 124 C-FTTLVAALQRKVKKVTIVSTVLSDP-SMASDQLRRQADYFMDLAYLKNEI 173 F + + R +V ++ ++ASD L F+DL + Sbjct: 158 QAFKQPLEDIARSGVEVQVLGFREHASWALASDTL-----EFVDLEDIPGVF 204 >gi|256824702|ref|YP_003148662.1| hypothetical protein Ksed_08430 [Kytococcus sedentarius DSM 20547] gi|256688095|gb|ACV05897.1| hypothetical protein Ksed_08430 [Kytococcus sedentarius DSM 20547] Length = 190 Score = 39.7 bits (92), Expect = 0.16, Method: Composition-based stats. Identities = 23/132 (17%), Positives = 45/132 (34%), Gaps = 24/132 (18%) Query: 10 LFIDGANLYAS-SKALGFDIDY------RKLLKAFRS--RAIVIRAYYYTTVVGDPEQQF 60 L +DG N+ A+ LG +LL +S V ++ + Sbjct: 12 LLVDGENIDATLGNCLGRRPQPDERPRWERLLTHVQSSWEQPVTGLFFLAA------SED 65 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 + L G++ + ++V +D+ + +E + +V+ S Sbjct: 66 HLPMNFVQALMAIGYKPI------PLSGAADEKV---VDIAIQKTLEALAERSDDVVLVS 116 Query: 121 GDGCFTTLVAAL 132 DG F + AL Sbjct: 117 HDGDFLPQMTAL 128 >gi|315441970|ref|YP_004074849.1| hypothetical protein Mspyr1_03000 [Mycobacterium sp. Spyr1] gi|315260273|gb|ADT97014.1| hypothetical protein Mspyr1_03000 [Mycobacterium sp. Spyr1] Length = 235 Score = 39.7 bits (92), Expect = 0.16, Method: Composition-based stats. Identities = 27/112 (24%), Positives = 43/112 (38%), Gaps = 15/112 (13%) Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 P ++ L GF V AK + D+ LA A +GL L++ S DG Sbjct: 104 RPWVEALRNVGFAVFAKPKI---DEDSDV----DSDM-LAHIALRNEQGLAGLIVASADG 155 Query: 124 C-FTTLVAALQRKVKKVTIVSTVLSDP-SMASDQLRRQADYFMDLAYLKNEI 173 F + + R +V ++ ++ASD L F+DL + Sbjct: 156 QAFKQPLEDIARSGVEVQVLGFREHASWALASDTL-----EFVDLEDIPGVF 202 >gi|168032729|ref|XP_001768870.1| predicted protein [Physcomitrella patens subsp. patens] gi|162679782|gb|EDQ66224.1| predicted protein [Physcomitrella patens subsp. patens] Length = 431 Score = 39.7 bits (92), Expect = 0.16, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 26/71 (36%), Gaps = 8/71 (11%) Query: 80 KVAKEFTENCGR-----KRVKSSM-DVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAA 131 K +E + G K D + VD F + +V+ +GD F + Sbjct: 60 KKVREGCQRTGVNLIDVPNGKKDAADKAILVDMFLFALDNPCSTIVLVTGDVDFAPALHK 119 Query: 132 LQRKVKKVTIV 142 L ++ V +V Sbjct: 120 LGQRGYVVVLV 130 >gi|34222877|sp|Q8EGS1|PPNK_SHEON RecName: Full=Probable inorganic polyphosphate/ATP-NAD kinase; Short=Poly(P)/ATP NAD kinase gi|24347283|gb|AAN54584.1|AE015598_3 conserved hypothetical protein [Shewanella oneidensis MR-1] Length = 309 Score = 39.7 bits (92), Expect = 0.18, Method: Composition-based stats. Identities = 25/126 (19%), Positives = 43/126 (34%), Gaps = 16/126 (12%) Query: 24 LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ--FSPLHPLLDWLHYNGFQVVAKV 81 +G + D + RS + ++ ++G P L L WL G++V+ + Sbjct: 1 MGINFDVSR--PKARSNINMTTKFHTIGLIGKPHHPGTNQTLKRLHHWLTMQGYEVLVEE 58 Query: 82 AKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTI 141 G V AVD E E + ++ GDG L R +V + Sbjct: 59 --RVATELGPHIV--------AVDLLEIGERCDLAIVVGGDGNMLGAARVLARF--EVGV 106 Query: 142 VSTVLS 147 + Sbjct: 107 IGVNRG 112 >gi|213493840|gb|ACJ48051.1| 6-hydroxy-3-succinoylpyridine hydroxylase [Pseudomonas putida] Length = 204 Score = 39.7 bits (92), Expect = 0.18, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 33/84 (39%), Gaps = 3/84 (3%) Query: 80 KVAKEFTENCGRKRVKSSMDVELAVDAF--EQSEGLEHLVIFSGDGCFTTLVAALQRK-V 136 K +E E K + DV LA+ A+ + ++H VI + D + ++ Sbjct: 107 KAPRECREIQAWKVEEKQSDVNLALQAYHDSITGQVDHAVIVTNDTDIAPALQMIRAHTD 166 Query: 137 KKVTIVSTVLSDPSMASDQLRRQA 160 ++ +V A+ L + A Sbjct: 167 VRIGVVVPTSGQNRSANTDLIKFA 190 >gi|311895493|dbj|BAJ27901.1| hypothetical protein KSE_20780 [Kitasatospora setae KM-6054] Length = 395 Score = 39.7 bits (92), Expect = 0.19, Method: Composition-based stats. Identities = 37/163 (22%), Positives = 67/163 (41%), Gaps = 22/163 (13%) Query: 28 IDYRKLLKAFRSRAI------VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKV 81 +D+ L+ A R RA ++R Y++ V +++ +P H L L +V ++ Sbjct: 32 VDHPVLIAALRERAQAETGLPLLRIYWFDAAV---DRRPAPEHRRLRVLP----RVTVRL 84 Query: 82 AKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKV 139 T GR K +D + + E + +V+ +GDG VA+ + V Sbjct: 85 G-ALTRAEGRWVQKG-VDAAMHAELSELARNHACADVVLVTGDGDLLPGVASAKEHGVAV 142 Query: 140 TIVSTVLSDPS-MASDQLRRQADYFMDLAYLKNEIAR--DPDE 179 + + +D S++L +AD L + I R P E Sbjct: 143 HLWALEAADGDFNQSEELVGEADERRVLD--RAWIQRWARPRE 183 >gi|269796423|ref|YP_003315878.1| hypothetical protein Sked_31470 [Sanguibacter keddieii DSM 10542] gi|269098608|gb|ACZ23044.1| hypothetical protein Sked_31470 [Sanguibacter keddieii DSM 10542] Length = 192 Score = 39.7 bits (92), Expect = 0.19, Method: Composition-based stats. Identities = 30/187 (16%), Positives = 61/187 (32%), Gaps = 40/187 (21%) Query: 1 MFDPREKIA----LFIDGANLYASSKALGFDI---------DYRKLLKAFRSRAIVIRAY 47 M ++ A L +DG N+ A+ LG ++ R A + Sbjct: 1 MSGSEQRTARPTYLLVDGENIDAT---LGMNVLGHRPAPEERPR--WDRISEFAQTLWGQ 55 Query: 48 YYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVEL--AVD 105 T + P + L G++ + + +D+ + ++ Sbjct: 56 PVTPLFFLNASSGQMPMPFVQALLAMGYRPI---------PLAGASHEKVVDIGIQRTLE 106 Query: 106 AFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS----MASDQLRRQAD 161 A + +G +++ S DG F V AL ++V ++ +++ L Sbjct: 107 AIKDVDG--DVLLASHDGDFLPQVEALLDGERRVGLMCFREFVNGRLNELSARGL----- 159 Query: 162 YFMDLAY 168 F DL Sbjct: 160 EFFDLEE 166 >gi|242398802|ref|YP_002994226.1| hypothetical protein TSIB_0816 [Thermococcus sibiricus MM 739] gi|242265195|gb|ACS89877.1| hypothetical protein TSIB_0816 [Thermococcus sibiricus MM 739] Length = 153 Score = 39.7 bits (92), Expect = 0.20, Method: Composition-based stats. Identities = 26/120 (21%), Positives = 44/120 (36%), Gaps = 17/120 (14%) Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEF-----------TENCGRKRVKSSMDVELAVDAFE 108 L +L L+ G VV KV + V +DV +AV+ + Sbjct: 23 DISLEDILYALNDIGRIVVGKVVINYEFSSNLLKSIIDSGLESVMVNGRVDVAVAVEGMK 82 Query: 109 QS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 + L + + D F LV +R K V +++ S+ L+ AD ++L Sbjct: 83 IIYNPRINVLALATRDAHFMPLVFEAKRMGKDVIVIAPEKK----VSEALQNIADKTIEL 138 >gi|315231507|ref|YP_004071943.1| hypothetical protein TERMP_01745 [Thermococcus barophilus MP] gi|315184535|gb|ADT84720.1| hypothetical protein TERMP_01745 [Thermococcus barophilus MP] Length = 185 Score = 39.3 bits (91), Expect = 0.20, Method: Composition-based stats. Identities = 35/169 (20%), Positives = 64/169 (37%), Gaps = 32/169 (18%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 +KIAL IDG N+ F+I +++A + A Q++P Sbjct: 30 KKIALLIDGPNI----LRKEFNIHLEDIVEALEQLGNIRVAKVIL-------NQYAP-QG 77 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDG 123 L++ + GF+ + G VK LAV+A + ++ + + + + Sbjct: 78 LIEAVANQGFEPIIVP--------GETGVK------LAVEAMREIYNPNIDIIALATRNA 123 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 F ++ + K K+ I+ S L+ ADY + L E Sbjct: 124 EFLPIILKAKEKGKETVIIGVEPGF----SAALKHGADYVIVLTPRGEE 168 >gi|256396571|ref|YP_003118135.1| hypothetical protein Caci_7469 [Catenulispora acidiphila DSM 44928] gi|256362797|gb|ACU76294.1| protein of unknown function DUF88 [Catenulispora acidiphila DSM 44928] Length = 260 Score = 39.3 bits (91), Expect = 0.20, Method: Composition-based stats. Identities = 28/165 (16%), Positives = 45/165 (27%), Gaps = 29/165 (17%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 K+A+ ID N + + + LL Y Sbjct: 8 KLAVLIDADN---AQPS-----NAATLLAEIAKYGTAHVKRAY---GDWTGTSLKGWKEH 56 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGC 124 L L + ++F G+ D + +DA + S E I S D Sbjct: 57 LLALS-------IQPIQQFAYTSGKNAT----DAAMVIDAMDLLYSGRFEGFCIVSSDSD 105 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 FT L A ++ V + + D F+ L Sbjct: 106 FTRLAARIRESGLIVYGFGERKTPKPFVA-----ACDKFVYTENL 145 >gi|242398824|ref|YP_002994248.1| hypothetical protein TSIB_0838 [Thermococcus sibiricus MM 739] gi|242265217|gb|ACS89899.1| hypothetical protein TSIB_0838 [Thermococcus sibiricus MM 739] Length = 187 Score = 39.3 bits (91), Expect = 0.21, Method: Composition-based stats. Identities = 36/182 (19%), Positives = 70/182 (38%), Gaps = 35/182 (19%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 +KIAL IDG N+ F++ ++ A + A Q++P Sbjct: 34 KKIALLIDGPNI----LRKEFNVHLEDIVAALEELGNIRVAKVVL-------NQYAP-QG 81 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDG 123 L++ + GF+ + G VK LAV+A ++ ++ + + + + Sbjct: 82 LIEAIANQGFEPII--------VAGETGVK------LAVEAMREIYNQNIDIIALATRNA 127 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL---AYLKNEIARDPDED 180 F ++ + K K+ I+ S L+ ADY + L + I +D + Sbjct: 128 EFLPIILKAKEKGKETAIIGIEPGF----SAALKHAADYVIALERGEDNEEIIIQDTKKR 183 Query: 181 KK 182 +K Sbjct: 184 RK 185 >gi|28275219|ref|NP_717140.2| hypothetical protein SO_1523 [Shewanella oneidensis MR-1] Length = 292 Score = 39.3 bits (91), Expect = 0.21, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 29/87 (33%), Gaps = 12/87 (13%) Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 L L WL G++V+ + G V AVD E E + ++ Sbjct: 21 QTLKRLHHWLTMQGYEVLVEE--RVATELGPHIV--------AVDLLEIGERCDLAIVVG 70 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLS 147 GDG L R +V ++ Sbjct: 71 GDGNMLGAARVLARF--EVGVIGVNRG 95 >gi|121604991|ref|YP_982320.1| hypothetical protein Pnap_2090 [Polaromonas naphthalenivorans CJ2] gi|120593960|gb|ABM37399.1| conserved hypothetical protein [Polaromonas naphthalenivorans CJ2] Length = 268 Score = 39.3 bits (91), Expect = 0.21, Method: Composition-based stats. Identities = 26/146 (17%), Positives = 56/146 (38%), Gaps = 18/146 (12%) Query: 3 DPREKIALFIDGANLYAS---SKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59 + + +AL+ D NL+AS ++ G Y K FR + +I + Sbjct: 7 ESQPSVALYWDFENLHASLCEARQEGA---YSKQDNRFRVQEPLIDIQAVVELAASFGP- 62 Query: 60 FSPLHPLLDWLHYNGFQ-----VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLE 114 + +W +++ ++ ++ + F K+ D++L +DA E Sbjct: 63 IAINRAYCNWQYFSRYRDALLQCAVELIQLFPPG---GSAKNGADIKLCLDAMEDMGRFG 119 Query: 115 HL---VIFSGDGCFTTLVAALQRKVK 137 H+ +I GD F + ++ + Sbjct: 120 HIGTIIIVGGDSDFMPVSQKVKAAGR 145 >gi|295394693|ref|ZP_06804911.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] gi|294972463|gb|EFG48320.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] Length = 257 Score = 39.3 bits (91), Expect = 0.21, Method: Composition-based stats. Identities = 10/52 (19%), Positives = 20/52 (38%), Gaps = 3/52 (5%) Query: 87 ENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136 + K +D+ + +D +E + +V+ SGD F +R Sbjct: 152 DFDLDITQKG-VDMRIGLDIASLAERRLVNQIVMISGDSDFVPAAKHARRSG 202 >gi|25026904|ref|NP_736958.1| hypothetical protein CE0348 [Corynebacterium efficiens YS-314] gi|23492184|dbj|BAC17158.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] Length = 281 Score = 39.3 bits (91), Expect = 0.21, Method: Composition-based stats. Identities = 9/52 (17%), Positives = 21/52 (40%), Gaps = 3/52 (5%) Query: 87 ENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136 + K +D+ + +D +E + +V+ +GD F +R+ Sbjct: 172 DFQLEITQKG-VDMRIGLDIASLAERQTVNQIVMITGDSDFVPAAKHARREG 222 >gi|94312326|ref|YP_585536.1| hypothetical protein Rmet_3395 [Cupriavidus metallidurans CH34] gi|93356178|gb|ABF10267.1| conserved hypothetical protein [Cupriavidus metallidurans CH34] Length = 432 Score = 39.3 bits (91), Expect = 0.21, Method: Composition-based stats. Identities = 13/76 (17%), Positives = 27/76 (35%), Gaps = 7/76 (9%) Query: 99 DVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156 D + +DA + + + I S D FT L + ++ + V + + Sbjct: 80 DSAMIIDAMDLLYTGRFDGFCIVSSDSDFTRLASRIREQGLTVYGFGERKTPKPFVT--- 136 Query: 157 RRQADYFMDLAYLKNE 172 D F+ L+ + Sbjct: 137 --ACDKFIYSDVLRAD 150 >gi|113869484|ref|YP_727973.1| hypothetical protein H16_A3546 [Ralstonia eutropha H16] gi|113528260|emb|CAJ94605.1| uncharacterized conserved protein [Ralstonia eutropha H16] Length = 417 Score = 39.3 bits (91), Expect = 0.21, Method: Composition-based stats. Identities = 13/76 (17%), Positives = 27/76 (35%), Gaps = 7/76 (9%) Query: 99 DVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156 D + +DA + + + I S D FT L + ++ + V + + Sbjct: 81 DSAMIIDAMDLLYTGRFDGFCIVSSDSDFTRLASRIREQGLTVYGFGERKTPKPFVT--- 137 Query: 157 RRQADYFMDLAYLKNE 172 D F+ L+ + Sbjct: 138 --ACDKFIYSDVLRAD 151 >gi|313200777|ref|YP_004039435.1| hypothetical protein MPQ_1031 [Methylovorus sp. MP688] gi|312440093|gb|ADQ84199.1| conserved hypothetical protein [Methylovorus sp. MP688] Length = 280 Score = 39.3 bits (91), Expect = 0.22, Method: Composition-based stats. Identities = 20/97 (20%), Positives = 36/97 (37%), Gaps = 9/97 (9%) Query: 76 QVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGCFTTLVAAL 132 +++ K A + + + K+S D L +DA + + L+ I S D FT L Sbjct: 63 EILPKHAIQPIQQYANTKGKNSTDSALIIDAMDLLYTAP-LDGFCIVSSDSDFTRLAIRF 121 Query: 133 QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 + K V + L + F+ + L Sbjct: 122 RESGKMVYGFGEQK-----TPESLMAACNQFIYIEIL 153 >gi|302347101|ref|YP_003815399.1| hypothetical protein HMPREF0659_A7383 [Prevotella melaninogenica ATCC 25845] gi|302151044|gb|ADK97305.1| conserved hypothetical protein [Prevotella melaninogenica ATCC 25845] Length = 256 Score = 39.3 bits (91), Expect = 0.22, Method: Composition-based stats. Identities = 29/175 (16%), Positives = 58/175 (33%), Gaps = 26/175 (14%) Query: 6 EKIALFIDGANLYASSKALG---------FDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP 56 +++ + DG N Y + K + +D ++F V+ Y T Sbjct: 44 KRVTFYFDGFNFYFALKRKKKISPEWKDFYWLDLVAFCESFLGPDQVLEKVIYFTASPLS 103 Query: 57 EQQFSPLHPLLDW---LHYNGFQVVAKVAK------EFTENCGRKRVKSSMDVELAVDAF 107 Q+ S L+ LH + F+V+ + + K + DV ++V Sbjct: 104 PQKNSRQSAFLNANRILHSDKFEVIRGKYMSKQIECPYCKYSISKPEEKRTDVNISVRMM 163 Query: 108 E--QSEGLEHLVIFSGDGCFTTLVAALQRK--VKKVTIVSTVLSDPSMASDQLRR 158 + + +V+ S D + + KKV + P + +L Sbjct: 164 ADCVQDKTDVIVLISADTDLIPPLNFIHTNYPNKKVKV----FFPPGSHALELHN 214 >gi|169334288|ref|ZP_02861481.1| hypothetical protein ANASTE_00686 [Anaerofustis stercorihominis DSM 17244] gi|169259005|gb|EDS72971.1| hypothetical protein ANASTE_00686 [Anaerofustis stercorihominis DSM 17244] Length = 233 Score = 39.3 bits (91), Expect = 0.22, Method: Composition-based stats. Identities = 9/48 (18%), Positives = 22/48 (45%), Gaps = 3/48 (6%) Query: 91 RKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKV 136 + K +D+++ VD + + + +++ SGD F +R+ Sbjct: 144 DIKQKG-VDMKIGVDIASLAYKKQVSQIILISGDSDFVPAAKLARREG 190 >gi|323343191|ref|ZP_08083422.1| protein of hypothetical function DUF88 [Erysipelothrix rhusiopathiae ATCC 19414] gi|322463255|gb|EFY08450.1| protein of hypothetical function DUF88 [Erysipelothrix rhusiopathiae ATCC 19414] Length = 241 Score = 39.3 bits (91), Expect = 0.22, Method: Composition-based stats. Identities = 29/165 (17%), Positives = 57/165 (34%), Gaps = 29/165 (17%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 +IA+ ID N+ + + +L+ Y GD +Q + Sbjct: 8 RIAVLIDAENVPYA--------NIGGVLREVARYGTPTVKRIY----GDWTKQTASG--- 52 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGC 124 W + + ++++ G K+S D + +DA + +E I S D Sbjct: 53 --WKSHLLEHAIT-PIQQYSYTTG----KNSSDSAMIIDAMDILYEGNVESFCIVSSDSD 105 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 FT L L+ K V + + + + D F+ + + Sbjct: 106 FTRLAVRLREAGKYVIGIGEQKTPSAFIA-----SCDKFIYIEII 145 >gi|269105290|ref|ZP_06157980.1| protein of unknown function DUF88 [Photobacterium damselae subsp. damselae CIP 102761] gi|268160490|gb|EEZ38993.1| protein of unknown function DUF88 [Photobacterium damselae subsp. damselae CIP 102761] Length = 222 Score = 39.3 bits (91), Expect = 0.22, Method: Composition-based stats. Identities = 37/176 (21%), Positives = 65/176 (36%), Gaps = 32/176 (18%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 IALF+D N + F +LLK + I + + S H Sbjct: 9 IALFVDADN----TSPSNFTFVIEQLLKRGQIHYRHIYGNW-------TKPCLSSWH--- 54 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE-QSEGLEHLV-IFSGDGCF 125 +V A +F + K++ D+ + VD E H++ I + D F Sbjct: 55 --------EVGQLHAAQFIQVFDLCSHKNASDIAMVVDILEWNQSHPNHVIAIMTSDSDF 106 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 T L+ L+R ++T+ + S L++ F+ + +K I P + K Sbjct: 107 TPLLNQLRR-----HQITTIGIGNANCSIHLQKSFSTFIPIP-VKETI--SPTKPK 154 >gi|253998702|ref|YP_003050765.1| hypothetical protein Msip34_0991 [Methylovorus sp. SIP3-4] gi|253985381|gb|ACT50238.1| protein of unknown function DUF88 [Methylovorus sp. SIP3-4] Length = 275 Score = 39.3 bits (91), Expect = 0.23, Method: Composition-based stats. Identities = 20/97 (20%), Positives = 36/97 (37%), Gaps = 9/97 (9%) Query: 76 QVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGCFTTLVAAL 132 +++ K A + + + K+S D L +DA + + L+ I S D FT L Sbjct: 58 EILPKHAIQPIQQYANTKGKNSTDSALIIDAMDLLYTAP-LDGFCIVSSDSDFTRLAIRF 116 Query: 133 QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 + K V + L + F+ + L Sbjct: 117 RESGKMVYGFGEQK-----TPESLMAACNQFIYIEIL 148 >gi|56476616|ref|YP_158205.1| hypothetical protein ebB63 [Aromatoleum aromaticum EbN1] gi|56312659|emb|CAI07304.1| hypothetical protein ebB63 [Aromatoleum aromaticum EbN1] Length = 90 Score = 39.3 bits (91), Expect = 0.23, Method: Composition-based stats. Identities = 7/41 (17%), Positives = 18/41 (43%) Query: 98 MDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKK 138 M + L + + + + +V+ +GD F +R+ + Sbjct: 1 MRIGLDIASLTLKKQADTIVLVAGDSDFVPAAQLARREGME 41 >gi|85703543|ref|ZP_01034647.1| hypothetical protein ROS217_22417 [Roseovarius sp. 217] gi|85672471|gb|EAQ27328.1| hypothetical protein ROS217_22417 [Roseovarius sp. 217] Length = 242 Score = 39.3 bits (91), Expect = 0.23, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 54/161 (33%), Gaps = 41/161 (25%) Query: 7 KIALFIDGANL--YASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 ++++F+D N+ + L L +RAY ++ D Sbjct: 14 RLSVFVDADNISVTHAQTILD--------LARRHGAPDQLRAYGNVGLLPD--------- 56 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGD 122 W GFQ + K++ D+ + +DA E S+ +++ S D Sbjct: 57 ----WDKVPGFQFI-----------HSGSGKNATDMLMCIDAMERALSDQCAAVLLVSSD 101 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163 FT L L+ V + + + ++ R F Sbjct: 102 QDFTHLATRLRGYGLTV-----IGAGEAKTLERFRAACSEF 137 >gi|167997905|ref|XP_001751659.1| predicted protein [Physcomitrella patens subsp. patens] gi|162697640|gb|EDQ83976.1| predicted protein [Physcomitrella patens subsp. patens] Length = 449 Score = 39.3 bits (91), Expect = 0.23, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 26/71 (36%), Gaps = 8/71 (11%) Query: 80 KVAKEFTENCGR-----KRVKSSM-DVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAA 131 K +E + G K D + VD F + +V+ +GD F + Sbjct: 60 KKVREGCQRTGVNLIDVPNGKKDAADKAILVDMFLFALDNPCSTIVLVTGDVDFAPALHK 119 Query: 132 LQRKVKKVTIV 142 L ++ V +V Sbjct: 120 LGQRGYVVILV 130 >gi|259506035|ref|ZP_05748937.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] gi|259166392|gb|EEW50946.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] Length = 247 Score = 39.3 bits (91), Expect = 0.23, Method: Composition-based stats. Identities = 9/52 (17%), Positives = 21/52 (40%), Gaps = 3/52 (5%) Query: 87 ENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136 + K +D+ + +D +E + +V+ +GD F +R+ Sbjct: 138 DFQLEITQKG-VDMRIGLDIASLAERQTVNQIVMITGDSDFVPAAKHARREG 188 >gi|325855713|ref|ZP_08171904.1| hypothetical protein HMPREF9303_0369 [Prevotella denticola CRIS 18C-A] gi|325483766|gb|EGC86728.1| hypothetical protein HMPREF9303_0369 [Prevotella denticola CRIS 18C-A] Length = 260 Score = 39.3 bits (91), Expect = 0.23, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 33/90 (36%), Gaps = 11/90 (12%) Query: 99 DVELAVDAFEQSE--GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156 D + +DA + + I S D FT L L+ K V + + Sbjct: 78 DSAMIIDAMDILHGGDCDGFCIVSSDSDFTRLATRLRESGKYVIGIGEQKTPQPF----- 132 Query: 157 RRQADYFMDLAYLK----NEIARDPDEDKK 182 D F+ + L+ NEI ++ + K+ Sbjct: 133 IVSCDKFIYIEILETINANEIKKEDNTAKR 162 >gi|301117798|ref|XP_002906627.1| conserved hypothetical protein [Phytophthora infestans T30-4] gi|262107976|gb|EEY66028.1| conserved hypothetical protein [Phytophthora infestans T30-4] Length = 173 Score = 39.3 bits (91), Expect = 0.24, Method: Composition-based stats. Identities = 27/116 (23%), Positives = 46/116 (39%), Gaps = 12/116 (10%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL--- 63 + AL IDG+ ++ALG IDY KL A +A + Q+ +P Sbjct: 18 RAALIIDGSYAMIGARALGGKIDYIKLRSALEDQASTQFGDCWFFDQNPSAQRVNPALTA 77 Query: 64 -HPLLDWLHYNG--FQVVAKVAKEFT------ENCGRKRVKSSMDVELAVDAFEQS 110 + +L + +G FQV K++ N + V+ +D +A + Sbjct: 78 EYHMLKFAPPDGPQFQVSLFPMKKYNCHCRRCGNHFTQNVQKGVDNGIATKILSLA 133 >gi|330880020|gb|EGH14169.1| hypothetical protein PSYMP_26883 [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 229 Score = 39.3 bits (91), Expect = 0.24, Method: Composition-based stats. Identities = 26/166 (15%), Positives = 54/166 (32%), Gaps = 39/166 (23%) Query: 7 KIALFIDGANLYA---SSKALGFDIDYRKLLKA---FRSRAIVIRA--YYYTTVVGDPEQ 58 + A F+DG NL+ + + +D LL + A ++ T V+ Sbjct: 2 RTACFVDGYNLFYGLLAGTPYKW-LDLPSLLAHIIRVEYPDNTLDAVSFFTTGVMPTLAT 60 Query: 59 Q----FSPLHPLLDWLHYNGFQVV-------AKVAKEFTENCG----------RKRVKSS 97 + + L G +V+ + A F + K + Sbjct: 61 RGTLSKEAQDTYVRALKVRGVEVLYGRHQLEPRNAPRFVDKDTPASRADQVGIWKLEEKE 120 Query: 98 MDVELAVDAFEQSE---------GLEHLVIFSGDGCFTTLVAALQR 134 DV +A+ + + ++ +V+ S D T + A++ Sbjct: 121 TDVHIAISMYRLASRQMALPPEARIQQIVLVSADTDMTPSLRAIRE 166 >gi|237714047|ref|ZP_04544528.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262407099|ref|ZP_06083648.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|294644732|ref|ZP_06722480.1| conserved hypothetical protein [Bacteroides ovatus SD CC 2a] gi|229445871|gb|EEO51662.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262355802|gb|EEZ04893.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|292639941|gb|EFF58211.1| conserved hypothetical protein [Bacteroides ovatus SD CC 2a] Length = 122 Score = 39.3 bits (91), Expect = 0.25, Method: Composition-based stats. Identities = 16/119 (13%), Positives = 38/119 (31%), Gaps = 11/119 (9%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDY-----RKLLKAFRSRAIVIRAYYYTTVVGDPE 57 + ++K+ +++DG N Y K+ + + Y +S ++ Y++ D Sbjct: 2 EDKKKVIVYVDGFNFYYGLKSKKWKMCYWLDLVSFFNSFLKSYQELVEVNYFSARPTDAG 61 Query: 58 QQFSPLHPLLDWLHYNGFQVVA-----KVAK-EFTENCGRKRVKSSMDVELAVDAFEQS 110 + F ++ K K + + DV +A + Sbjct: 62 KHDRQDKLFQANKCNPKFNLILGKYLKKEIKCRYCGGIIHSFEEKETDVRIATKILSDA 120 >gi|189210104|ref|XP_001941384.1| conserved hypothetical protein [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187977477|gb|EDU44103.1| conserved hypothetical protein [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 260 Score = 39.3 bits (91), Expect = 0.25, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 33/89 (37%), Gaps = 7/89 (7%) Query: 81 VAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVT 140 ++F G+ +M ++ A+D + L + S D FT L A ++ + VT Sbjct: 63 PIQQFAYTTGKNVTDGAMIID-AMDLL-YTGRLSSFCLVSSDSDFTRLAARIREQG--VT 118 Query: 141 IVSTVLSDPSMASDQLRRQADYFMDLAYL 169 + ++ D FM L Sbjct: 119 VYGFGERK---TNNAFIAACDKFMYFDVL 144 >gi|227549577|ref|ZP_03979626.1| conserved hypothetical protein [Corynebacterium lipophiloflavum DSM 44291] gi|227078341|gb|EEI16304.1| conserved hypothetical protein [Corynebacterium lipophiloflavum DSM 44291] Length = 177 Score = 39.3 bits (91), Expect = 0.25, Method: Composition-based stats. Identities = 12/77 (15%), Positives = 25/77 (32%), Gaps = 15/77 (19%) Query: 74 GFQVVAKVAK------------EFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIF 119 G+ + K + + K +D+ + +D +E + +V+ Sbjct: 48 GYTLRDGPLKKLCRGAISVEDLQEHDFVLEISQKG-VDMRIGLDIASLAERGLVNQIVMI 106 Query: 120 SGDGCFTTLVAALQRKV 136 SGD F +R Sbjct: 107 SGDSDFVPAAKHARRSG 123 >gi|156744147|ref|YP_001434276.1| hypothetical protein Rcas_4231 [Roseiflexus castenholzii DSM 13941] gi|156235475|gb|ABU60258.1| hypothetical protein Rcas_4231 [Roseiflexus castenholzii DSM 13941] Length = 206 Score = 39.3 bits (91), Expect = 0.25, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 25/64 (39%), Gaps = 4/64 (6%) Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170 GL+ VI SGDG F L L K V + S + + D F+ + + Sbjct: 13 PGLDVFVIVSGDGGFAALAKKLHEYGKTV----IGCAYRSAVNKTFQAVCDEFVWITDPE 68 Query: 171 NEIA 174 ++ Sbjct: 69 EKVQ 72 >gi|289668076|ref|ZP_06489151.1| hypothetical protein XcampmN_06148 [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 250 Score = 39.0 bits (90), Expect = 0.26, Method: Composition-based stats. Identities = 38/222 (17%), Positives = 73/222 (32%), Gaps = 50/222 (22%) Query: 8 IALFIDGANLYAS---SKALGFDID----YRKLLKAFRSRAIVIRAYYYTT-----VVGD 55 A++IDG NLY A + +D + +LL ++ Y+T + Sbjct: 7 TAVYIDGYNLYYGRIRGTAFKW-LDVVALFDRLLHDQDPSTELLHVRYFTAPALGRFATN 65 Query: 56 PEQQFSPLHPLLDWLHY-NGFQVVAKVAKEFTENCG--------------------RKRV 94 + L L + + + + K + G K Sbjct: 66 KQASEIAQTTYLRALAHTHPQRFTTTLGKHSWDKGGAFLAEFVSGQPYDRTRRVRVWKLE 125 Query: 95 KSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTI-VSTVLSDP-- 149 + DV LA+ + + + LV+ S D ++ A++ + + V T+ P Sbjct: 126 EKQTDVNLALAMYRDAASAQYQQLVVCSNDSDIEPVLTAIREDFPTIVLGVVTLRRQPVE 185 Query: 150 ----SMASDQLRRQAD---YFMDLAYLK----NEIARDPDED 180 S L +AD +++ + L E R P + Sbjct: 186 GESDRRVSASLSSRADWTRHYILDSELAAAQLPERVRKPGKP 227 >gi|51209447|ref|YP_063410.1| cpp15 [Campylobacter coli] gi|39979655|gb|AAR29499.1| cpp15 [Campylobacter coli] gi|315059224|gb|ADT73552.1| cpp15 [Campylobacter jejuni subsp. jejuni S3] Length = 242 Score = 39.0 bits (90), Expect = 0.27, Method: Composition-based stats. Identities = 17/114 (14%), Positives = 37/114 (32%), Gaps = 10/114 (8%) Query: 31 RKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCG 90 +LL R + Y V + S D+ + E T Sbjct: 103 SELLNHLRKQP-------YFAVRLGEIDENSFQWKFRDYDKFRKILRKEIDICELTSEDF 155 Query: 91 RKRVK-SSMDVELAVDAFEQSE--GLEHLVIFSGDGCFTTLVAALQRKVKKVTI 141 +K +D+++ +D + E +++ + D F V +++ V + Sbjct: 156 VLDIKQKGVDMKIGLDIATLANKHHAEKIILITADSDFIPAVKHARKEGIIVQL 209 >gi|288573726|ref|ZP_06392083.1| protein of unknown function DUF88 [Dethiosulfovibrio peptidovorans DSM 11002] gi|288569467|gb|EFC91024.1| protein of unknown function DUF88 [Dethiosulfovibrio peptidovorans DSM 11002] Length = 274 Score = 39.0 bits (90), Expect = 0.27, Method: Composition-based stats. Identities = 15/86 (17%), Positives = 27/86 (31%), Gaps = 7/86 (8%) Query: 99 DVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156 D + +DA + + + + S D FT L A ++ V + S Sbjct: 80 DSAMIIDAMDLLFTNRFDGFCLVSSDSDFTRLAARIREAGLMVYGFGEKKTPKPFVS--- 136 Query: 157 RRQADYFMDLAYLKNEIARDPDEDKK 182 D F+ + P K+ Sbjct: 137 --ACDKFIYTEVISVNKEDSPSAIKR 160 >gi|320537841|ref|ZP_08037758.1| hypothetical protein HMPREF9554_02512 [Treponema phagedenis F0421] gi|320145310|gb|EFW37009.1| hypothetical protein HMPREF9554_02512 [Treponema phagedenis F0421] Length = 250 Score = 39.0 bits (90), Expect = 0.27, Method: Composition-based stats. Identities = 10/53 (18%), Positives = 23/53 (43%), Gaps = 3/53 (5%) Query: 86 TENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136 T+ R K +D+++ +D + + +V+ +GD F +R+ Sbjct: 151 TDFDLVLRQKG-VDMKIGIDIATLAYKKLADQIVLITGDSDFVPAAKLARREG 202 >gi|225175633|ref|ZP_03729627.1| conserved hypothetical protein [Dethiobacter alkaliphilus AHT 1] gi|225168962|gb|EEG77762.1| conserved hypothetical protein [Dethiobacter alkaliphilus AHT 1] Length = 246 Score = 39.0 bits (90), Expect = 0.28, Method: Composition-based stats. Identities = 36/181 (19%), Positives = 61/181 (33%), Gaps = 30/181 (16%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 + KIA+ ID N+ S K + + D + Y + Q +P Sbjct: 2 ENDRKIAVLIDADNV--SEKYIKYIFD------EISNHGTPTYKRIY---GDWTKPQLTP 50 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 +L + + ++++ G+ D L +DA + SE ++ I S Sbjct: 51 WKNVL-----LNYSIT--PIQQYSYTTGKNAT----DAALIIDAMDILYSENVDGFCIVS 99 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 D FT L A L+ V + + + + F L L I DE Sbjct: 100 SDSDFTKLAARLREAGMYVIGMGEKKTPTPFIA-----ACEKFKYLEVLAA-IPAASDEP 153 Query: 181 K 181 K Sbjct: 154 K 154 >gi|281415100|ref|ZP_06246842.1| hypothetical protein MlutN2_07862 [Micrococcus luteus NCTC 2665] Length = 162 Score = 39.0 bits (90), Expect = 0.28, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 27/76 (35%), Gaps = 13/76 (17%) Query: 74 GFQVVAKVAKEF------------TENCGRKRVKS-SMDVELAVDAFEQSEGLEHLVIFS 120 G+Q+ A+ K+ + K M V L + A +E + +++ S Sbjct: 27 GYQIKAQPLKKLLRGEISVADLEADDFLLDITQKGVDMRVGLDIAALAATEPVNQIIMIS 86 Query: 121 GDGCFTTLVAALQRKV 136 GD F +R Sbjct: 87 GDSDFVPAGKHARRSG 102 >gi|227876363|ref|ZP_03994475.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35243] gi|269975928|ref|ZP_06182932.1| conserved hypothetical protein [Mobiluncus mulieris 28-1] gi|306817255|ref|ZP_07451001.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35239] gi|307700454|ref|ZP_07637493.1| conserved hypothetical protein [Mobiluncus mulieris FB024-16] gi|227842904|gb|EEJ53101.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35243] gi|269935756|gb|EEZ92286.1| conserved hypothetical protein [Mobiluncus mulieris 28-1] gi|304649935|gb|EFM47214.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35239] gi|307614439|gb|EFN93669.1| conserved hypothetical protein [Mobiluncus mulieris FB024-16] Length = 191 Score = 39.0 bits (90), Expect = 0.28, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 7/78 (8%) Query: 98 MDVEL--AVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQ 155 +DV + +DA + G ++V+ S DG F + L R +V +V S + Sbjct: 95 VDVGIQRTLDAIA-ARGEGNIVLVSHDGDFEPQLQTLLRNGHRVAVVGF----DEFLSGE 149 Query: 156 LRRQADYFMDLAYLKNEI 173 LR + + + L+ EI Sbjct: 150 LRSLEEQGLKIIDLEREI 167 >gi|239918681|ref|YP_002958239.1| hypothetical protein Mlut_22170 [Micrococcus luteus NCTC 2665] gi|239839888|gb|ACS31685.1| hypothetical protein Mlut_22170 [Micrococcus luteus NCTC 2665] Length = 247 Score = 39.0 bits (90), Expect = 0.29, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 27/76 (35%), Gaps = 13/76 (17%) Query: 74 GFQVVAKVAKEF------------TENCGRKRVKS-SMDVELAVDAFEQSEGLEHLVIFS 120 G+Q+ A+ K+ + K M V L + A +E + +++ S Sbjct: 112 GYQIKAQPLKKLLRGEISVADLEADDFLLDITQKGVDMRVGLDIAALAATEPVNQIIMIS 171 Query: 121 GDGCFTTLVAALQRKV 136 GD F +R Sbjct: 172 GDSDFVPAGKHARRSG 187 >gi|300780304|ref|ZP_07090160.1| conserved hypothetical protein [Corynebacterium genitalium ATCC 33030] gi|300534414|gb|EFK55473.1| conserved hypothetical protein [Corynebacterium genitalium ATCC 33030] Length = 223 Score = 39.0 bits (90), Expect = 0.29, Method: Composition-based stats. Identities = 37/151 (24%), Positives = 55/151 (36%), Gaps = 28/151 (18%) Query: 34 LKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKR 93 L A R I A +T V + P ++ L GF V AK Sbjct: 65 LSARTGRRIEPEATVFTNVSPGSADV---VRPWVEALRNVGFAVFAKP------------ 109 Query: 94 VKSSMDVELAVDAFEQSEG------LEHLVIFSGDG-CFTTLVAALQRKVKKVTIVSTVL 146 K+ D ++ + E E L+ +V+ S DG F L+ L + +TVL Sbjct: 110 -KADDDSDVDGEMIEHIERRRAEGVLQGVVVASADGQNFHELLDELSADG----LPATVL 164 Query: 147 SDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 AS + A F+DL + R+P Sbjct: 165 GFHEHASWAVTSPAITFVDLEDIPGVF-REP 194 >gi|325972567|ref|YP_004248758.1| hypothetical protein SpiBuddy_2755 [Spirochaeta sp. Buddy] gi|324027805|gb|ADY14564.1| Domain of unknown function DUF88 [Spirochaeta sp. Buddy] Length = 266 Score = 39.0 bits (90), Expect = 0.30, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 30/57 (52%), Gaps = 4/57 (7%) Query: 91 RKRVKSSMDVELAVDAFEQ----SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVS 143 K+ D+ ++++A E + ++ V + D FT ++ AL++ K+V +V+ Sbjct: 75 TTNYKNRADLIISLEALETIIINTPVIDRYVFITSDSDFTVIMEALRKYGKEVYLVT 131 >gi|319955340|ref|YP_004166607.1| 2,4-dienoyl-CoA reductase [Cellulophaga algicola DSM 14237] gi|319424000|gb|ADV51109.1| 2,4-dienoyl-CoA reductase [Cellulophaga algicola DSM 14237] Length = 675 Score = 39.0 bits (90), Expect = 0.30, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 22/51 (43%) Query: 112 GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADY 162 ++ +VI +G F L+ LQ K KV ++ + + + QA Sbjct: 620 KVDTVVICAGQVPFKELLEPLQAKGIKVHVIGGADVAAELDAKRAIHQACR 670 >gi|162447870|ref|YP_001621002.1| hypothetical protein ACL_1016 [Acholeplasma laidlawii PG-8A] gi|161985977|gb|ABX81626.1| conserved hypothetical protein [Acholeplasma laidlawii PG-8A] Length = 242 Score = 39.0 bits (90), Expect = 0.30, Method: Composition-based stats. Identities = 29/178 (16%), Positives = 54/178 (30%), Gaps = 32/178 (17%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 IAL ID N+ I ++ + A Y + + + Sbjct: 9 IALLIDADNI--------SPIYLDIIINEANKHGKITNARVYGDWSQERLKTWRSK---- 56 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSM-DVELAVDAFEQ--SEGLEHLVIFSGDGC 124 K + F + K + D L +DA + S + I S D Sbjct: 57 ----------AEKFSLTFVQQYANLSNKGNATDFTLVIDAMDLLYSNKVNAFCIVSSDSD 106 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182 FT L+ L+ + + S + L + F + + + P +++K Sbjct: 107 FTKLIIRLKE-----DNMYLIGMGESKTPEVLVNSYERFYYIDQILEALE--PKKERK 157 >gi|167838348|ref|ZP_02465207.1| hypothetical protein Bpse38_17705 [Burkholderia thailandensis MSMB43] Length = 172 Score = 39.0 bits (90), Expect = 0.31, Method: Composition-based stats. Identities = 8/53 (15%), Positives = 23/53 (43%), Gaps = 2/53 (3%) Query: 86 TENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKV 136 ++ + +D+ + VD + + ++ +V+ +GD F +R+ Sbjct: 69 PDDVVVDVRQKGVDMRIGVDVSSLAFKKQVDQIVLVAGDADFVPAAKQARREG 121 >gi|227551254|ref|ZP_03981303.1| phosphoribosylaminoimidazole carboxylase [Enterococcus faecium TX1330] gi|227179594|gb|EEI60566.1| phosphoribosylaminoimidazole carboxylase [Enterococcus faecium TX1330] Length = 377 Score = 39.0 bits (90), Expect = 0.31, Method: Composition-based stats. Identities = 26/146 (17%), Positives = 50/146 (34%), Gaps = 28/146 (19%) Query: 31 RKLLKA-FRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENC 89 +LL+ F ++ A Y T V + D + G+ V K + + Sbjct: 109 DRLLEKSFLETNNIVIAPYATIVSPTD---------IQDAIDGIGYPCVLKTTRGGYDGK 159 Query: 90 GRKRVKSSMDVELAVDAFEQSEGLEHLVI-----------FSGDGCFT--TLVAALQRKV 136 G+ +KS D+ A+D + + I +G G FT +V + R Sbjct: 160 GQYVLKSRADLAPAMDLLREGTCVLEAWIPFEKEISIMVAGNGQGDFTTFPVVENIHRNN 219 Query: 137 KKVTIVSTVLSDPSMASDQLRRQADY 162 ++ P+ + +A+ Sbjct: 220 ILHETIA-----PAAIDQDVIEEAER 240 >gi|331682212|ref|ZP_08382834.1| conserved hypothetical protein [Escherichia coli H299] gi|331080636|gb|EGI51812.1| conserved hypothetical protein [Escherichia coli H299] Length = 285 Score = 39.0 bits (90), Expect = 0.32, Method: Composition-based stats. Identities = 8/41 (19%), Positives = 19/41 (46%), Gaps = 2/41 (4%) Query: 98 MDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136 +D++L +D + ++ +V+ +GD F + K Sbjct: 163 VDIKLGMDITTLAYEKLVDVIVLVAGDSDFVPAAKHARIKG 203 >gi|257887629|ref|ZP_05667282.1| phosphoribosylaminoimidazole carboxylase [Enterococcus faecium 1,141,733] gi|257896124|ref|ZP_05675777.1| phosphoribosylaminoimidazole carboxylase [Enterococcus faecium Com12] gi|257823683|gb|EEV50615.1| phosphoribosylaminoimidazole carboxylase [Enterococcus faecium 1,141,733] gi|257832689|gb|EEV59110.1| phosphoribosylaminoimidazole carboxylase [Enterococcus faecium Com12] Length = 374 Score = 39.0 bits (90), Expect = 0.32, Method: Composition-based stats. Identities = 26/146 (17%), Positives = 50/146 (34%), Gaps = 28/146 (19%) Query: 31 RKLLKA-FRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENC 89 +LL+ F ++ A Y T V + D + G+ V K + + Sbjct: 106 DRLLEKSFLETNNIVIAPYATIVSPTD---------IQDAIDGIGYPCVLKTTRGGYDGK 156 Query: 90 GRKRVKSSMDVELAVDAFEQSEGLEHLVI-----------FSGDGCFT--TLVAALQRKV 136 G+ +KS D+ A+D + + I +G G FT +V + R Sbjct: 157 GQYVLKSRADLAPAMDLLREGTCVLEAWIPFEKEISIMVAGNGQGDFTTFPVVENIHRNN 216 Query: 137 KKVTIVSTVLSDPSMASDQLRRQADY 162 ++ P+ + +A+ Sbjct: 217 ILHETIA-----PAAIDQDVIEEAER 237 >gi|261367119|ref|ZP_05980002.1| conserved hypothetical protein [Subdoligranulum variabile DSM 15176] gi|282571242|gb|EFB76777.1| conserved hypothetical protein [Subdoligranulum variabile DSM 15176] Length = 275 Score = 39.0 bits (90), Expect = 0.32, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 55/168 (32%), Gaps = 29/168 (17%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 K+A+ ID N+ S K + + +L S + Y + L Sbjct: 5 KLAILIDADNI--SPKYV------KVILDEAASFGVAACKRIY------GDWSDVRLKSW 50 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGC 124 D L N ++++ G+ D + +DA + L+ I S D Sbjct: 51 KDALLNNSII----PIQQYSYTTGKNAT----DSAMIIDAMDLLYGGNLDGFCIVSSDSD 102 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 FT L A L+ K V + + + D F L + + Sbjct: 103 FTRLAARLREAGKLVIGMGESKALGPFV-----KACDQFKYLDLILDH 145 >gi|21282108|ref|NP_645196.1| hypothetical protein MW0379 [Staphylococcus aureus subsp. aureus MW2] gi|300911084|ref|ZP_07128533.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus TCH70] gi|21203544|dbj|BAB94244.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus MW2] gi|300887263|gb|EFK82459.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus TCH70] Length = 229 Score = 39.0 bits (90), Expect = 0.32, Method: Composition-based stats. Identities = 11/79 (13%), Positives = 27/79 (34%), Gaps = 3/79 (3%) Query: 87 ENCGRKRVKS-SMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTV 145 + + K M + L + + ++ +++ +GD F + + + S Sbjct: 140 DFSLSLQQKGVDMKIGLDIASLSFKHQVDKIILIAGDSDFVPAAKLARTEGIDFVLDSLG 199 Query: 146 LSDPSMASDQL--RRQADY 162 + S + RR D Sbjct: 200 ADIRNNLSLHIDGRRTCDE 218 >gi|145301490|ref|YP_001144329.1| hypothetical protein ASA_P5G111 [Aeromonas salmonicida subsp. salmonicida A449] gi|142856372|gb|ABO92581.1| conserved hypothetical protein [Aeromonas salmonicida subsp. salmonicida A449] Length = 240 Score = 39.0 bits (90), Expect = 0.33, Method: Composition-based stats. Identities = 8/48 (16%), Positives = 19/48 (39%), Gaps = 2/48 (4%) Query: 96 SSMDVELAVDA--FEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTI 141 +D++L +D + + +V+ SGD F + + + Sbjct: 148 KGVDMKLGLDIATLTLKKQVNKIVLISGDSDFVPAAKLARAEGVHFVL 195 >gi|293552837|ref|ZP_06673495.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit [Enterococcus faecium E1039] gi|291602971|gb|EFF33165.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit [Enterococcus faecium E1039] Length = 377 Score = 39.0 bits (90), Expect = 0.34, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 50/146 (34%), Gaps = 28/146 (19%) Query: 31 RKLLKA-FRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENC 89 +LL+ F ++ A Y T V + D + G+ V K + + Sbjct: 109 DRLLEKSFLETNNIVIAPYATIVSPTD---------IQDAIDGIGYPCVLKTTRGGYDGK 159 Query: 90 GRKRVKSSMDVELAVDAFEQSEGLEHLVI-----------FSGDGCFT--TLVAALQRKV 136 G+ +KS +D+ A+D + + I +G G FT +V + Sbjct: 160 GQYVLKSRVDLAPAMDLLREGTCVLEAWIPFEKEISIMVAGNGQGDFTTFPVVENIHHNN 219 Query: 137 KKVTIVSTVLSDPSMASDQLRRQADY 162 ++ P+ + +A+ Sbjct: 220 ILHETIA-----PAAIDQDVIEEAER 240 >gi|302692512|ref|XP_003035935.1| hypothetical protein SCHCODRAFT_105536 [Schizophyllum commune H4-8] gi|300109631|gb|EFJ01033.1| hypothetical protein SCHCODRAFT_105536 [Schizophyllum commune H4-8] Length = 701 Score = 38.6 bits (89), Expect = 0.34, Method: Composition-based stats. Identities = 27/133 (20%), Positives = 48/133 (36%), Gaps = 20/133 (15%) Query: 14 GANLYASSKALGFDIDYRKLLKAFRSRAIVIRAY-YYTTVVGDPEQQFSPLHPLLDWLHY 72 N + + GFDI K ++ + A+ Y Q + + L L Sbjct: 6 VENCHFTGGCSGFDI--AKNIERVALPHGSVTAFNAYL-----DPQLCTISNNLRSELQS 58 Query: 73 NGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGCFTTLV 129 +G ++ +C K+++D L D + LV+ SGD F Sbjct: 59 SGVALI---------DCPHNGQKNAVDQMLQTDILLFALDNPAPATLVLISGDRDFAYTA 109 Query: 130 AALQRKVKKVTIV 142 A L+R+ V ++ Sbjct: 110 AVLRRRHYNVILI 122 >gi|293571980|ref|ZP_06682994.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit [Enterococcus faecium E980] gi|291607998|gb|EFF37306.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit [Enterococcus faecium E980] Length = 370 Score = 38.6 bits (89), Expect = 0.34, Method: Composition-based stats. Identities = 26/146 (17%), Positives = 50/146 (34%), Gaps = 28/146 (19%) Query: 31 RKLLKA-FRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENC 89 +LL+ F ++ A Y T V + D + G+ V K + + Sbjct: 102 DRLLEKSFLETNNIVIAPYATIVSPTD---------IQDAIDGIGYPCVLKTTRGGYDGK 152 Query: 90 GRKRVKSSMDVELAVDAFEQSEGLEHLVI-----------FSGDGCFT--TLVAALQRKV 136 G+ +KS D+ A+D + + I +G G FT +V + R Sbjct: 153 GQYVLKSRADLAPAMDLLREGTCVLEAWIPFEKEISIMVAGNGQGDFTTFPVVENIHRNN 212 Query: 137 KKVTIVSTVLSDPSMASDQLRRQADY 162 ++ P+ + +A+ Sbjct: 213 ILHETIA-----PAAIDQDVIEEAER 233 >gi|241554076|ref|YP_002979289.1| protein of unknown function DUF88 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240863382|gb|ACS61044.1| protein of unknown function DUF88 [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 262 Score = 38.6 bits (89), Expect = 0.34, Method: Composition-based stats. Identities = 17/103 (16%), Positives = 34/103 (33%), Gaps = 8/103 (7%) Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKK 138 + ++F G+ +M ++ A+D + I S D F L + ++ + Sbjct: 61 IQPVQQFAYTTGKNATDGAMIID-AMDLL-YTGRFSAFCIVSSDSDFARLASRIREQGVT 118 Query: 139 VTIVSTVLSDPSMASDQLRRQADYFMDLAYL-KNEIARDPDED 180 V + D F+ L N + D +D Sbjct: 119 VYGFGERKTPRPF-----ITACDKFVYFDVLNANSVESDLRQD 156 >gi|293377001|ref|ZP_06623212.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit [Enterococcus faecium PC4.1] gi|292644370|gb|EFF62469.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit [Enterococcus faecium PC4.1] Length = 370 Score = 38.6 bits (89), Expect = 0.34, Method: Composition-based stats. Identities = 26/146 (17%), Positives = 50/146 (34%), Gaps = 28/146 (19%) Query: 31 RKLLKA-FRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENC 89 +LL+ F ++ A Y T V + D + G+ V K + + Sbjct: 102 DRLLEKSFLETNNIVIAPYATIVSPTD---------IQDAIDGIGYPCVLKTTRGGYDGK 152 Query: 90 GRKRVKSSMDVELAVDAFEQSEGLEHLVI-----------FSGDGCFT--TLVAALQRKV 136 G+ +KS D+ A+D + + I +G G FT +V + R Sbjct: 153 GQYVLKSRADLAPAMDLLREGTCVLEAWIPFEKEISIMVAGNGQGDFTTFPVVENIHRNN 212 Query: 137 KKVTIVSTVLSDPSMASDQLRRQADY 162 ++ P+ + +A+ Sbjct: 213 ILHETIA-----PAAIDQDVIEEAER 233 >gi|290983351|ref|XP_002674392.1| predicted protein [Naegleria gruberi] gi|284087982|gb|EFC41648.1| predicted protein [Naegleria gruberi] Length = 650 Score = 38.6 bits (89), Expect = 0.36, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 21/43 (48%), Gaps = 3/43 (6%) Query: 99 DVELAVDAFEQSEG---LEHLVIFSGDGCFTTLVAALQRKVKK 138 D+ L ++ + E + +I S D F +V A++ + K+ Sbjct: 314 DIALTIEVIKDLERKKPFDVFIIASSDSDFVPVVKAIRDEGKE 356 >gi|268324239|emb|CBH37827.1| chemotaxis response regulator protein-glutamate methylesterase [uncultured archaeon] Length = 339 Score = 38.6 bits (89), Expect = 0.36, Method: Composition-based stats. Identities = 24/131 (18%), Positives = 49/131 (37%), Gaps = 18/131 (13%) Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAK-EFTENCGRKRVKSSMDVELAVDAFEQSEG 112 + P H + +G+ V K + + V+ S+DV ++ +E Sbjct: 216 AEDNDLIKPGHAF---IAPSGYHTVVKKGRIKLNTRPKENSVRPSIDVAMS----SAAEA 268 Query: 113 L-EHL--VIFSGDG-CFTTLVAALQRKVKKV----TIVSTVLSDPSMASDQLRRQADYFM 164 + + V+ SG G + A++ + K + S + P A+ + D + Sbjct: 269 YRDKVIGVLLSGMGKDGAEGMKAIKERGGKTIAQDELTSVIFGMPK-AAIE-MDAVDKVV 326 Query: 165 DLAYLKNEIAR 175 L + +EI R Sbjct: 327 PLPDIVDEIMR 337 >gi|117921344|ref|YP_870536.1| inorganic polyphosphate/ATP-NAD kinase [Shewanella sp. ANA-3] gi|189037393|sp|A0KZB1|PPNK_SHESA RecName: Full=Probable inorganic polyphosphate/ATP-NAD kinase; Short=Poly(P)/ATP NAD kinase gi|117613676|gb|ABK49130.1| ATP-NAD/AcoX kinase [Shewanella sp. ANA-3] Length = 309 Score = 38.6 bits (89), Expect = 0.36, Method: Composition-based stats. Identities = 17/79 (21%), Positives = 25/79 (31%), Gaps = 10/79 (12%) Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 L L WL G++V+ + G +AVD E + ++ Sbjct: 38 QTLKRLHHWLTVQGYEVLVEE--RVASELGTNI--------IAVDLLEIGARCDLAIVVG 87 Query: 121 GDGCFTTLVAALQRKVKKV 139 GDG L R V Sbjct: 88 GDGNMLGAARVLARFDVGV 106 >gi|134288743|ref|YP_001111040.1| gp9, Cpp15 [Burkholderia phage phiE202] gi|134131956|gb|ABO60704.1| gp9, Cpp15 [Burkholderia phage phiE202] Length = 251 Score = 38.6 bits (89), Expect = 0.37, Method: Composition-based stats. Identities = 9/52 (17%), Positives = 23/52 (44%), Gaps = 3/52 (5%) Query: 87 ENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKV 136 + R K +D+ + +D + + ++ +V+ +GD F +R+ Sbjct: 155 DVMVDVRQKG-VDMRIGLDVSSLAFKKQVDQIVLIAGDADFVPAAKQARREG 205 >gi|317145182|ref|XP_001820499.2| hypothetical protein AOR_1_2934154 [Aspergillus oryzae RIB40] Length = 258 Score = 38.6 bits (89), Expect = 0.38, Method: Composition-based stats. Identities = 26/165 (15%), Positives = 49/165 (29%), Gaps = 29/165 (17%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 K+ + ID N +++ +D LL Y + + L Sbjct: 8 KLVVLIDADN----ARS--SVVDP--LLSEIAKYGTAHAKRAY------GDWTRTNLQGW 53 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGC 124 D L K + + + K++ D + +DA + S + + S D Sbjct: 54 KDQL--------LKQSIQPIQQFAYTHGKNATDSAMIIDAMDLLYSSRYDGFCLVSSDSD 105 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 FT L A ++ V + + F+ L Sbjct: 106 FTRLAARIRESGLIVYGFGENHTPKPFVA-----ACSKFIYTENL 145 >gi|49485284|ref|YP_042505.1| hypothetical protein SAS0381 [Staphylococcus aureus subsp. aureus MSSA476] gi|297209084|ref|ZP_06925483.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus ATCC 51811] gi|49243727|emb|CAG42152.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus MSSA476] gi|296886017|gb|EFH24951.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus ATCC 51811] Length = 229 Score = 38.6 bits (89), Expect = 0.39, Method: Composition-based stats. Identities = 11/79 (13%), Positives = 27/79 (34%), Gaps = 3/79 (3%) Query: 87 ENCGRKRVKS-SMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTV 145 + + K M + L + + ++ +++ +GD F + + + S Sbjct: 140 DFSLSLQQKGVDMKIGLDIASLSFKHQVDKIILIAGDSDFVPAAKLARTEGIDFVLDSLG 199 Query: 146 LSDPSMASDQL--RRQADY 162 + S + RR D Sbjct: 200 ADIRNNLSLHIDGRRTCDE 218 >gi|210633171|ref|ZP_03297707.1| hypothetical protein COLSTE_01620 [Collinsella stercoris DSM 13279] gi|210159211|gb|EEA90182.1| hypothetical protein COLSTE_01620 [Collinsella stercoris DSM 13279] Length = 175 Score = 38.6 bits (89), Expect = 0.40, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 27/73 (36%), Gaps = 7/73 (9%) Query: 99 DVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156 D + +DA + S ++ I S D FT LVA L+ V + + S Sbjct: 79 DSAMIIDAMDILYSGTVDGFAIVSSDSDFTRLVARLRESGMVVIGMGEQKTPKPFIS--- 135 Query: 157 RRQADYFMDLAYL 169 + F L L Sbjct: 136 --ACNQFKYLDLL 146 >gi|298693751|gb|ADI96973.1| hypothetical protein SAOV_0437 [Staphylococcus aureus subsp. aureus ED133] Length = 229 Score = 38.6 bits (89), Expect = 0.40, Method: Composition-based stats. Identities = 11/79 (13%), Positives = 27/79 (34%), Gaps = 3/79 (3%) Query: 87 ENCGRKRVKS-SMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTV 145 + + K M + L + + ++ +++ +GD F + + + S Sbjct: 140 DFSLSLQQKGVDMKIGLDIASLSFKHQVDKIILIAGDSDFVPAAKLARTEGIDFVLDSLG 199 Query: 146 LSDPSMASDQL--RRQADY 162 + S + RR D Sbjct: 200 ADIRNNLSLHIDGRRTCDE 218 >gi|218132405|ref|ZP_03461209.1| hypothetical protein BACPEC_00264 [Bacteroides pectinophilus ATCC 43243] gi|217992743|gb|EEC58745.1| hypothetical protein BACPEC_00264 [Bacteroides pectinophilus ATCC 43243] Length = 251 Score = 38.6 bits (89), Expect = 0.41, Method: Composition-based stats. Identities = 28/169 (16%), Positives = 63/169 (37%), Gaps = 21/169 (12%) Query: 3 DPREKIALFIDGANLYASSKALGFDI--DYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 + + A+F+D + + F + ++ + ++ ++ + + V GD ++ Sbjct: 7 SSKPRAAVFVDYEHWFY-GYHNNFHMRPNFEEWIQELKNEYDIDELH----VFGDFSERQ 61 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLV 117 L L + T + K DV + + + + + V Sbjct: 62 IGAE--LPELQR-----ITNNNVTHTASDKLGVDKDFTDVIILDHIYRSAAKKKSADVYV 114 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 +F+GD FT +V L+ KKV I S+ L+ A ++++ Sbjct: 115 LFTGDAHFTCVVDYLKELNKKVVIYGVKFGF----SNALKSAATSYVEM 159 >gi|218128838|ref|ZP_03457642.1| hypothetical protein BACEGG_00410 [Bacteroides eggerthii DSM 20697] gi|217989066|gb|EEC55382.1| hypothetical protein BACEGG_00410 [Bacteroides eggerthii DSM 20697] Length = 234 Score = 38.6 bits (89), Expect = 0.41, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 25/68 (36%), Gaps = 7/68 (10%) Query: 99 DVELAVDAFEQSE--GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156 D+ L +DA + ++ + + DG ++ L ++ KV + L Sbjct: 80 DIALVIDAMDILRDGQVDCFCLVASDGDYSLLAQRIREAGVKV-----LGYGEGKTPVSL 134 Query: 157 RRQADYFM 164 R F+ Sbjct: 135 VRSCSVFL 142 >gi|154315023|ref|XP_001556835.1| hypothetical protein BC1G_04853 [Botryotinia fuckeliana B05.10] gi|150848391|gb|EDN23584.1| hypothetical protein BC1G_04853 [Botryotinia fuckeliana B05.10] Length = 270 Score = 38.6 bits (89), Expect = 0.42, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 19/48 (39%), Gaps = 6/48 (12%) Query: 113 LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160 + LV+ S D F LV L RK + +V + S L R Sbjct: 150 YDWLVLISDDTDFGDLVKRLSRKGVRTIVVGSKP------SRNLVRAT 191 >gi|313676381|ref|YP_004054377.1| hypothetical protein Ftrac_2290 [Marivirga tractuosa DSM 4126] gi|312943079|gb|ADR22269.1| hypothetical protein Ftrac_2290 [Marivirga tractuosa DSM 4126] Length = 242 Score = 38.6 bits (89), Expect = 0.43, Method: Composition-based stats. Identities = 21/103 (20%), Positives = 36/103 (34%), Gaps = 7/103 (6%) Query: 82 AKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKV 139 A + G K++ D + +DA + S+ + + S D FT L L+ KV Sbjct: 57 AITPIQQYGYTTGKNATDSAMIIDAMDILYSQKVHGFCLVSSDSDFTRLATRLREAGMKV 116 Query: 140 TIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182 + + D F+ + L N+ D K Sbjct: 117 YGIGEKKTPNPF-----IVACDKFIYIEILNNQAEETEDTKSK 154 >gi|302883636|ref|XP_003040717.1| hypothetical protein NECHADRAFT_67900 [Nectria haematococca mpVI 77-13-4] gi|256721607|gb|EEU35004.1| hypothetical protein NECHADRAFT_67900 [Nectria haematococca mpVI 77-13-4] Length = 434 Score = 38.6 bits (89), Expect = 0.43, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 54/167 (32%), Gaps = 42/167 (25%) Query: 10 LFIDGANLYAS-SKALGF--------------DID---YRKLLKAFRSRAIVIRAYYYTT 51 +FID +N+ KAL ++ + KLL R + Sbjct: 240 VFIDMSNIIIGFQKALRARYSLPESVRFIPLPQMNLEFFHKLLVRDRHAEWL-------- 291 Query: 52 VVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFT---ENCGRKRVKSSMD----VELAV 104 VG ++ L G++V + + E G + V+ +D + + Sbjct: 292 NVGCSMHPDKQKPHFIEELEDLGYRVDLRSRRPQNMAMEGHGSRYVEDMVDETLQIRIGE 351 Query: 105 DAFEQSEGLEHLVIFSG--------DGCFTTLVAALQRKVKKVTIVS 143 + + LV+ +G DG AL + V +VS Sbjct: 352 SVMQYFDKPGTLVLATGDARPAKYSDGFLAYAQRAL-KMGWNVEVVS 397 >gi|189500992|ref|YP_001960462.1| hypothetical protein Cphamn1_2071 [Chlorobium phaeobacteroides BS1] gi|189496433|gb|ACE04981.1| conserved hypothetical protein [Chlorobium phaeobacteroides BS1] Length = 247 Score = 38.6 bits (89), Expect = 0.43, Method: Composition-based stats. Identities = 18/99 (18%), Positives = 38/99 (38%), Gaps = 7/99 (7%) Query: 76 QVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQ 133 +V+ + + + + G R K++ D + +DA + + + I S D FT L + ++ Sbjct: 55 EVLLEHSIQPIQQFGYTRGKNATDSAMIIDAMDLLYTGNFDGFCIVSSDSDFTKLASRIR 114 Query: 134 RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 V + + S D F+ L+ Sbjct: 115 ESGLFVYGFGEKKTPSAFVS-----ACDKFIYTEVLRAR 148 >gi|121609559|ref|YP_997366.1| hypothetical protein Veis_2603 [Verminephrobacter eiseniae EF01-2] gi|121554199|gb|ABM58348.1| hypothetical protein Veis_2603 [Verminephrobacter eiseniae EF01-2] Length = 277 Score = 38.6 bits (89), Expect = 0.44, Method: Composition-based stats. Identities = 17/109 (15%), Positives = 42/109 (38%), Gaps = 16/109 (14%) Query: 39 SRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSM 98 +R ++R Y+Y V+ + F+P L + F+ ++R +S+ Sbjct: 55 TRKELLRVYWYDGVMAN---GFTPQQRSLANIDDVQFRAGT------INGRDQQRDIASL 105 Query: 99 DVELAVDAFEQSEG---LEHLVIFSGDGCFTTLVAALQRKVKKVTIVST 144 +A D E + + V+ +GD + ++ ++ ++ Sbjct: 106 ---IATDLLELAGHHAICD-AVLVTGDSDLAVGIDMAKKHGVRIAVLGV 150 >gi|258616422|ref|ZP_05714192.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit [Enterococcus faecium DO] Length = 284 Score = 38.2 bits (88), Expect = 0.44, Method: Composition-based stats. Identities = 26/146 (17%), Positives = 49/146 (33%), Gaps = 28/146 (19%) Query: 31 RKLLKA-FRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENC 89 +LL+ F ++ A Y T V + D + G+ V K + + Sbjct: 16 DRLLEKSFLETNNIVIAPYATIVSPTD---------IQDAIDGIGYPCVLKTTRGGYDGK 66 Query: 90 GRKRVKSSMDVELAVDAFEQSEGLEHLVI-----FS------GDGCFT--TLVAALQRKV 136 G+ +KS D+ A+D + + I S G G FT +V + Sbjct: 67 GQYVLKSRADLAPAMDLLREGTCVLEAWIPFEKEISIMVAGNGQGDFTTFPVVENIHHNN 126 Query: 137 KKVTIVSTVLSDPSMASDQLRRQADY 162 ++ P+ + +A+ Sbjct: 127 ILHETIA-----PAAIDQDVIEEAER 147 >gi|254432426|ref|ZP_05046129.1| protein containing DUF88 [Cyanobium sp. PCC 7001] gi|197626879|gb|EDY39438.1| protein containing DUF88 [Cyanobium sp. PCC 7001] Length = 244 Score = 38.2 bits (88), Expect = 0.45, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 33/94 (35%), Gaps = 11/94 (11%) Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVIFSGDGCFTTLVAALQRKV 136 + ++F+ G+ D L +DA + +E + S D FT L ++ + Sbjct: 61 IQPVQQFSYTSGKNAT----DSALIIDAMDLLHGGRVEGFCLVSSDSDFTRLATRIREEG 116 Query: 137 KKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170 V + + + D F+ LK Sbjct: 117 LLVIGFGERKTPKAFVA-----ACDRFLYTDILK 145 >gi|227500425|ref|ZP_03930487.1| conserved hypothetical protein [Anaerococcus tetradius ATCC 35098] gi|227217488|gb|EEI82807.1| conserved hypothetical protein [Anaerococcus tetradius ATCC 35098] Length = 224 Score = 38.2 bits (88), Expect = 0.46, Method: Composition-based stats. Identities = 7/47 (14%), Positives = 22/47 (46%), Gaps = 2/47 (4%) Query: 92 KRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKV 136 + +D+++ +D + + ++ +V+ +GD F +R+ Sbjct: 143 TSKQKGVDMKIGIDIASLAYKKQVDKIVLIAGDSDFVPAAKLARREG 189 >gi|145219215|ref|YP_001129924.1| hypothetical protein Cvib_0400 [Prosthecochloris vibrioformis DSM 265] gi|145205379|gb|ABP36422.1| conserved hypothetical protein [Chlorobium phaeovibrioides DSM 265] Length = 247 Score = 38.2 bits (88), Expect = 0.48, Method: Composition-based stats. Identities = 19/100 (19%), Positives = 37/100 (37%), Gaps = 7/100 (7%) Query: 76 QVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQ 133 +V+ + + + + G R K++ D + +DA + + I S D FT L ++ Sbjct: 55 EVLLEFSIQPIQQFGYTRGKNATDSAMIIDAMDLLYTGRFNGFCIVSSDSDFTKLAVRIR 114 Query: 134 RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 V + S D F+ L+ +I Sbjct: 115 ESGLIVYGFGEKKTPAPFVS-----ACDKFIYTEVLREKI 149 >gi|298529874|ref|ZP_07017276.1| conserved hypothetical protein [Desulfonatronospira thiodismutans ASO3-1] gi|298509248|gb|EFI33152.1| conserved hypothetical protein [Desulfonatronospira thiodismutans ASO3-1] Length = 213 Score = 38.2 bits (88), Expect = 0.48, Method: Composition-based stats. Identities = 11/67 (16%), Positives = 29/67 (43%), Gaps = 7/67 (10%) Query: 100 VELAVDAFEQSEGL--EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLR 157 V++A+D + + V+ + + ++++ +V + + + S +L Sbjct: 143 VKMALDMITLAARKAGDMFVLITDRTDLVPAMEMVRQEGVQVCL----DNMHAPVSIELS 198 Query: 158 RQADYFM 164 QAD F+ Sbjct: 199 EQAD-FI 204 >gi|257884793|ref|ZP_05664446.1| phosphoribosylaminoimidazole carboxylase [Enterococcus faecium 1,231,501] gi|257820631|gb|EEV47779.1| phosphoribosylaminoimidazole carboxylase [Enterococcus faecium 1,231,501] Length = 374 Score = 38.2 bits (88), Expect = 0.50, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 49/146 (33%), Gaps = 28/146 (19%) Query: 31 RKLLKA-FRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENC 89 +LL+ F ++ A Y T V + D + G+ V K + + Sbjct: 106 DRLLEKSFLETNNIVIAPYATIVSPTD---------IQDAIDGIGYPCVLKTTRGGYDGK 156 Query: 90 GRKRVKSSMDVELAVDAFEQSEGLEHLVI-----------FSGDGCFT--TLVAALQRKV 136 G+ +KS D+ A+D + + I +G G FT +V + Sbjct: 157 GQYVLKSRADLAPAMDLLREGTCVLEAWIPFEKEISIMVAGNGQGDFTTFPVVENIHHNN 216 Query: 137 KKVTIVSTVLSDPSMASDQLRRQADY 162 ++ P+ + +A+ Sbjct: 217 ILHETIA-----PAAIDQDVIEEAER 237 >gi|298528840|ref|ZP_07016243.1| conserved hypothetical protein [Desulfonatronospira thiodismutans ASO3-1] gi|298510276|gb|EFI34179.1| conserved hypothetical protein [Desulfonatronospira thiodismutans ASO3-1] Length = 213 Score = 38.2 bits (88), Expect = 0.51, Method: Composition-based stats. Identities = 11/67 (16%), Positives = 29/67 (43%), Gaps = 7/67 (10%) Query: 100 VELAVDAFEQSEGL--EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLR 157 V++A+D + + V+ + + ++++ +V + + + S +L Sbjct: 143 VKMALDMITLAARKAGDMFVLITDRTDLVPAMEMVRQEGVQVCL----DNMHAPVSIELS 198 Query: 158 RQADYFM 164 QAD F+ Sbjct: 199 EQAD-FI 204 >gi|85708688|ref|ZP_01039754.1| hypothetical protein NAP1_05595 [Erythrobacter sp. NAP1] gi|85690222|gb|EAQ30225.1| hypothetical protein NAP1_05595 [Erythrobacter sp. NAP1] Length = 240 Score = 38.2 bits (88), Expect = 0.51, Method: Composition-based stats. Identities = 14/96 (14%), Positives = 36/96 (37%), Gaps = 7/96 (7%) Query: 76 QVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQ 133 ++ + + + K++ D+ + +DA + ++ I + D FT LV L+ Sbjct: 55 KITNRFGIRPQQQFDVSKGKNATDMAMTIDAIDLLYQGKVDGFGIMTSDSDFTPLVTRLR 114 Query: 134 RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 + + + + + F+D+ L Sbjct: 115 QDG--IIVYGFGEAK---TPQAFKSVCTRFIDIKQL 145 >gi|242310286|ref|ZP_04809441.1| helicase [Helicobacter pullorum MIT 98-5489] gi|239522684|gb|EEQ62550.1| helicase [Helicobacter pullorum MIT 98-5489] Length = 242 Score = 38.2 bits (88), Expect = 0.52, Method: Composition-based stats. Identities = 16/114 (14%), Positives = 39/114 (34%), Gaps = 10/114 (8%) Query: 31 RKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCG 90 +LLK R + Y V + S ++ + E + Sbjct: 103 SELLKHLRRQP-------YFAVRLGEIDENSFQWKFKNYDKFKKILRKEIDVSELSNEDF 155 Query: 91 RKRVK-SSMDVELAVDAFEQSE--GLEHLVIFSGDGCFTTLVAALQRKVKKVTI 141 +K +D+++ +D + +E +++ + D F V +++ V + Sbjct: 156 VLDIKQKGVDMKIGLDIATLANKHQVEKIILITADSDFVPAVKHARKEGLIVQL 209 >gi|83768358|dbj|BAE58497.1| unnamed protein product [Aspergillus oryzae] Length = 209 Score = 38.2 bits (88), Expect = 0.53, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 30/93 (32%), Gaps = 7/93 (7%) Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKV 136 K + + + K++ D + +DA + S + + S D FT L A ++ Sbjct: 9 LKQSIQPIQQFAYTHGKNATDSAMIIDAMDLLYSSRYDGFCLVSSDSDFTRLAARIRESG 68 Query: 137 KKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 V + + F+ L Sbjct: 69 LIVYGFGENHTPKPFVA-----ACSKFIYTENL 96 >gi|315930785|gb|EFV09786.1| Putative uncharacterized protein [Campylobacter jejuni subsp. jejuni 305] Length = 226 Score = 38.2 bits (88), Expect = 0.54, Method: Composition-based stats. Identities = 10/58 (17%), Positives = 26/58 (44%), Gaps = 3/58 (5%) Query: 82 AKEFTENCGRKRVK-SSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKV 136 K+ ++N K +D+++ +D + + ++ +V+ SGD F + + Sbjct: 137 IKDLSDNDYMYYAKQKGVDMKIGIDIATLALKKLVQKIVLISGDSDFVPASKLARTEG 194 >gi|294621300|ref|ZP_06700481.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit [Enterococcus faecium U0317] gi|314938735|ref|ZP_07846010.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit [Enterococcus faecium TX0133a04] gi|314941163|ref|ZP_07848060.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit [Enterococcus faecium TX0133C] gi|314947886|ref|ZP_07851291.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit [Enterococcus faecium TX0082] gi|314953060|ref|ZP_07856019.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit [Enterococcus faecium TX0133A] gi|314993311|ref|ZP_07858682.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit [Enterococcus faecium TX0133B] gi|314997626|ref|ZP_07862557.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit [Enterococcus faecium TX0133a01] gi|291599138|gb|EFF30174.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit [Enterococcus faecium U0317] gi|313588343|gb|EFR67188.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit [Enterococcus faecium TX0133a01] gi|313592213|gb|EFR71058.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit [Enterococcus faecium TX0133B] gi|313594862|gb|EFR73707.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit [Enterococcus faecium TX0133A] gi|313600023|gb|EFR78866.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit [Enterococcus faecium TX0133C] gi|313641948|gb|EFS06528.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit [Enterococcus faecium TX0133a04] gi|313645655|gb|EFS10235.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit [Enterococcus faecium TX0082] Length = 377 Score = 38.2 bits (88), Expect = 0.54, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 49/146 (33%), Gaps = 28/146 (19%) Query: 31 RKLLKA-FRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENC 89 +LL+ F ++ A Y T V + D + G+ V K + + Sbjct: 109 DRLLEKSFLETNNIVIAPYATIVSPTD---------IQDAIDGIGYPCVLKTTRGGYDGK 159 Query: 90 GRKRVKSSMDVELAVDAFEQSEGLEHLVI-----------FSGDGCFT--TLVAALQRKV 136 G+ +KS D+ A+D + + I +G G FT +V + Sbjct: 160 GQYVLKSRADLAPAMDLLREGTCVLEAWIPFEKEISIMVAGNGQGDFTTFPVVENIHHNN 219 Query: 137 KKVTIVSTVLSDPSMASDQLRRQADY 162 ++ P+ + +A+ Sbjct: 220 ILHETIA-----PAAIDQDVIEEAER 240 >gi|261207668|ref|ZP_05922353.1| phosphoribosylaminoimidazole carboxylase [Enterococcus faecium TC 6] gi|289565786|ref|ZP_06446229.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit [Enterococcus faecium D344SRF] gi|294615905|ref|ZP_06695747.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit [Enterococcus faecium E1636] gi|260078051|gb|EEW65757.1| phosphoribosylaminoimidazole carboxylase [Enterococcus faecium TC 6] gi|289162424|gb|EFD10281.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit [Enterococcus faecium D344SRF] gi|291591291|gb|EFF22958.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit [Enterococcus faecium E1636] Length = 374 Score = 38.2 bits (88), Expect = 0.54, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 49/146 (33%), Gaps = 28/146 (19%) Query: 31 RKLLKA-FRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENC 89 +LL+ F ++ A Y T V + D + G+ V K + + Sbjct: 106 DRLLEKSFLETNNIVIAPYATIVSPTD---------IQDAIDGIGYPCVLKTTRGGYDGK 156 Query: 90 GRKRVKSSMDVELAVDAFEQSEGLEHLVI-----------FSGDGCFT--TLVAALQRKV 136 G+ +KS D+ A+D + + I +G G FT +V + Sbjct: 157 GQYVLKSRADLAPAMDLLREGTCVLEAWIPFEKEISIMVAGNGQGDFTTFPVVENIHHNN 216 Query: 137 KKVTIVSTVLSDPSMASDQLRRQADY 162 ++ P+ + +A+ Sbjct: 217 ILHETIA-----PAAIDQDVIEEAER 237 >gi|69246325|ref|ZP_00603898.1| Phosphoribosylaminoimidazole carboxylase, ATPase subunit [Enterococcus faecium DO] gi|257878084|ref|ZP_05657737.1| phosphoribosylaminoimidazole carboxylase [Enterococcus faecium 1,230,933] gi|257889717|ref|ZP_05669370.1| phosphoribosylaminoimidazole carboxylase [Enterococcus faecium 1,231,410] gi|257892344|ref|ZP_05671997.1| phosphoribosylaminoimidazole carboxylase [Enterococcus faecium 1,231,408] gi|260559134|ref|ZP_05831320.1| phosphoribosylaminoimidazole carboxylase [Enterococcus faecium C68] gi|293563736|ref|ZP_06678176.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit [Enterococcus faecium E1162] gi|293569365|ref|ZP_06680662.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit [Enterococcus faecium E1071] gi|68195339|gb|EAN09789.1| Phosphoribosylaminoimidazole carboxylase, ATPase subunit [Enterococcus faecium DO] gi|257812312|gb|EEV41070.1| phosphoribosylaminoimidazole carboxylase [Enterococcus faecium 1,230,933] gi|257826077|gb|EEV52703.1| phosphoribosylaminoimidazole carboxylase [Enterococcus faecium 1,231,410] gi|257828723|gb|EEV55330.1| phosphoribosylaminoimidazole carboxylase [Enterococcus faecium 1,231,408] gi|260074891|gb|EEW63207.1| phosphoribosylaminoimidazole carboxylase [Enterococcus faecium C68] gi|291587891|gb|EFF19742.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit [Enterococcus faecium E1071] gi|291604314|gb|EFF33808.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit [Enterococcus faecium E1162] Length = 374 Score = 38.2 bits (88), Expect = 0.55, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 49/146 (33%), Gaps = 28/146 (19%) Query: 31 RKLLKA-FRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENC 89 +LL+ F ++ A Y T V + D + G+ V K + + Sbjct: 106 DRLLEKSFLETNNIVIAPYATIVSPTD---------IQDAIDGIGYPCVLKTTRGGYDGK 156 Query: 90 GRKRVKSSMDVELAVDAFEQSEGLEHLVI-----------FSGDGCFT--TLVAALQRKV 136 G+ +KS D+ A+D + + I +G G FT +V + Sbjct: 157 GQYVLKSRADLAPAMDLLREGTCVLEAWIPFEKEISIMVAGNGQGDFTTFPVVENIHHNN 216 Query: 137 KKVTIVSTVLSDPSMASDQLRRQADY 162 ++ P+ + +A+ Sbjct: 217 ILHETIA-----PAAIDQDVIEEAER 237 >gi|310798844|gb|EFQ33737.1| ATPase [Glomerella graminicola M1.001] Length = 1320 Score = 38.2 bits (88), Expect = 0.55, Method: Composition-based stats. Identities = 24/99 (24%), Positives = 37/99 (37%), Gaps = 21/99 (21%) Query: 29 DYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLD-----WLHYNGFQVVAKVAK 83 DY + K F R + A Y + D E S ++ L L + GF V++ K Sbjct: 659 DYEETYKYFTRRGSRVLALAYKQLTVDNELGGSKINELKRENVESGLTFAGFLVLSCPLK 718 Query: 84 EFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122 E D + AV +S +V+ +GD Sbjct: 719 E--------------DAKQAVQMLNESSH--RVVMITGD 741 >gi|268611850|ref|ZP_06145577.1| hypothetical protein RflaF_20381 [Ruminococcus flavefaciens FD-1] Length = 303 Score = 38.2 bits (88), Expect = 0.57, Method: Composition-based stats. Identities = 29/169 (17%), Positives = 53/169 (31%), Gaps = 31/169 (18%) Query: 7 KIALFIDGANLYASSKALGFDIDYRK-LLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 + A+ ID N+ ++K Y K +L + +V Y P Sbjct: 6 RYAVLIDADNV--AAK-------YTKYILDEVSNYGVVTYKRVY----------GDWTRP 46 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDG 123 L ++++ G+ D + +DA + S ++ I S D Sbjct: 47 NLAGWKNMALDNAITPIQQYSYTTGKNAT----DSAMIIDAMDILYSHNVDGFCIVSSDS 102 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 FT L L+ V + + ++ + F L L E Sbjct: 103 DFTRLAIRLRESGIHVIGMGERKTPKPFST-----ACNAFKYLEILAEE 146 >gi|257881130|ref|ZP_05660783.1| phosphoribosylaminoimidazole carboxylase [Enterococcus faecium 1,231,502] gi|257816788|gb|EEV44116.1| phosphoribosylaminoimidazole carboxylase [Enterococcus faecium 1,231,502] Length = 370 Score = 37.8 bits (87), Expect = 0.58, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 49/146 (33%), Gaps = 28/146 (19%) Query: 31 RKLLKA-FRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENC 89 +LL+ F ++ A Y T V + D + G+ V K + + Sbjct: 102 DRLLEKSFLETNNIVIAPYATIVSPTD---------IQDAIDGIGYPCVLKTTRGGYDGK 152 Query: 90 GRKRVKSSMDVELAVDAFEQSEGLEHLVI-----------FSGDGCFT--TLVAALQRKV 136 G+ +KS D+ A+D + + I +G G FT +V + Sbjct: 153 GQYVLKSRADLAPAMDLLREGTCVLEAWIPFEKEISIMVAGNGQGDFTTFPVVENIHHNN 212 Query: 137 KKVTIVSTVLSDPSMASDQLRRQADY 162 ++ P+ + +A+ Sbjct: 213 ILHETIA-----PAAIDQDVIEEAER 233 >gi|190015967|ref|YP_001965175.1| hypothetical protein PNSL1.072 [Rhodococcus sp. NS1] gi|114796807|gb|ABI79400.1| hypothetical protein PNSL1.072 [Rhodococcus sp. NS1] Length = 224 Score = 37.8 bits (87), Expect = 0.59, Method: Composition-based stats. Identities = 29/149 (19%), Positives = 65/149 (43%), Gaps = 14/149 (9%) Query: 5 REKIALFIDGANLYASSK-ALGFDI-----DY----RKLLKAFRSRAIVIRAYYYTTVVG 54 R+++ +F+D + S++ A G+ + D R++L A R R+ + + + Sbjct: 37 RDRVDVFLDMGYVIRSARTAFGWRVGSRTPDPLATAREIL-ALRYRSSELGTVHVFDGLH 95 Query: 55 DPEQQFSPLHPLLDW---LHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE 111 DP+++ H +LDW + +G +V ++ + G ++ + + A+D +S Sbjct: 96 DPDRRPLDHHRMLDWKHQVEASGEVIVHLRPLQYLPDGGFRQKEVDTSLAFAMDDAARSG 155 Query: 112 GLEHLVIFSGDGCFTTLVAALQRKVKKVT 140 E +V F+GD + + Sbjct: 156 RTEAIVAFTGDRDLLPAARRVIAADVRFE 184 >gi|78186223|ref|YP_374266.1| hypothetical protein Plut_0335 [Chlorobium luteolum DSM 273] gi|78166125|gb|ABB23223.1| conserved hypothetical protein [Chlorobium luteolum DSM 273] Length = 247 Score = 37.8 bits (87), Expect = 0.59, Method: Composition-based stats. Identities = 19/109 (17%), Positives = 40/109 (36%), Gaps = 8/109 (7%) Query: 76 QVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQ 133 +V+ + + + + G + K+S D + +DA + + I S D FT L ++ Sbjct: 55 EVLLEYSIQPIQQFGYTKGKNSTDSAMIIDAMDLLYTGRFNGFCIVSSDSDFTKLAVRIR 114 Query: 134 RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI-ARDPDEDK 181 V + S D F+ L+ + +P + + Sbjct: 115 EAGLTVYGFGEQKTPGPFVS-----ACDKFIYTEVLRAKTNENEPIKRR 158 >gi|258649161|ref|ZP_05736630.1| conserved hypothetical protein [Prevotella tannerae ATCC 51259] gi|260850826|gb|EEX70695.1| conserved hypothetical protein [Prevotella tannerae ATCC 51259] Length = 239 Score = 37.8 bits (87), Expect = 0.60, Method: Composition-based stats. Identities = 29/163 (17%), Positives = 53/163 (32%), Gaps = 39/163 (23%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYT-----TVVGDPEQQFSP 62 IA+ IDG N+ ++ LG DI + S I Y + E + Sbjct: 14 IAILIDGDNV--AADKLG-DI-----ISFVSSYGNPIIRRIYADWTKPAMKRWKEDAKTF 65 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVIFS 120 L++ L Y G + D+ L +DA + ++ I S Sbjct: 66 SFRLVEALSYVGVKNTT-------------------DMALVIDAMDLLHGKNVQGFCIVS 106 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163 D +T L ++ + ++ + + L+ F Sbjct: 107 SDSDYTLLAQRIREEG----LLVLGYGEQKTPA-SLQNSCHEF 144 >gi|194476703|ref|YP_002048882.1| hypothetical protein PCC_0222 [Paulinella chromatophora] gi|171191710|gb|ACB42672.1| hypothetical protein PCC_0222 [Paulinella chromatophora] Length = 246 Score = 37.8 bits (87), Expect = 0.60, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 29/69 (42%), Gaps = 6/69 (8%) Query: 18 YASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNG--- 74 Y +++ I YR LL+ + +VIRA+ Y + Q + H +G Sbjct: 29 YLAARP---QISYRFLLEELAAAGLVIRAWSYVPSLDHQGQAIAAWHSFQHEAKRSGPLN 85 Query: 75 FQVVAKVAK 83 +Q+ + + Sbjct: 86 YQISRRPIR 94 >gi|260578532|ref|ZP_05846443.1| conserved hypothetical protein [Corynebacterium jeikeium ATCC 43734] gi|258603316|gb|EEW16582.1| conserved hypothetical protein [Corynebacterium jeikeium ATCC 43734] Length = 130 Score = 37.8 bits (87), Expect = 0.61, Method: Composition-based stats. Identities = 15/86 (17%), Positives = 32/86 (37%), Gaps = 12/86 (13%) Query: 94 VKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSM 151 ++ +D+ + +D +E + +++ SGD F +R I + + Sbjct: 30 IQKGVDMRIGLDIATMAERGIVTQIIMISGDSDFVPAAKHARRAG----IDFIIDPLWAR 85 Query: 152 ASDQLRRQADYFMDLAYLKNEIARDP 177 SD L D ++ + R P Sbjct: 86 ISDSLNEHVD------GVRECVRRPP 105 >gi|312115431|ref|YP_004013027.1| hypothetical protein Rvan_2717 [Rhodomicrobium vannielii ATCC 17100] gi|311220560|gb|ADP71928.1| hypothetical protein Rvan_2717 [Rhodomicrobium vannielii ATCC 17100] Length = 626 Score = 37.8 bits (87), Expect = 0.61, Method: Composition-based stats. Identities = 11/53 (20%), Positives = 24/53 (45%), Gaps = 3/53 (5%) Query: 94 VKSSMDVELAVDA---FEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVS 143 K+ D+++A D E ++ SGD FT ++ L+ ++ + + Sbjct: 114 FKNGTDIKIACDIRDFLEHPTRFGEFIVLSGDADFTPVLHHLRSHDRRTVVYA 166 >gi|119775572|ref|YP_928312.1| inorganic polyphosphate/ATP-NAD kinase [Shewanella amazonensis SB2B] gi|119768072|gb|ABM00643.1| NAD(+) kinase [Shewanella amazonensis SB2B] Length = 292 Score = 37.8 bits (87), Expect = 0.61, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 26/77 (33%), Gaps = 10/77 (12%) Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122 L L WL G++V+ + G K VE AVD + ++ GD Sbjct: 23 LKRLHHWLGSQGYEVLVEERV-----AGELGAK----VE-AVDLLAIGNRCDLAIVVGGD 72 Query: 123 GCFTTLVAALQRKVKKV 139 G L R V Sbjct: 73 GNMLGAARVLARFDVGV 89 >gi|4335722|gb|AAD17400.1| unknown protein [Arabidopsis thaliana] Length = 524 Score = 37.8 bits (87), Expect = 0.62, Method: Composition-based stats. Identities = 16/94 (17%), Positives = 31/94 (32%), Gaps = 20/94 (21%) Query: 62 PLHPLLDWLHYNGFQVVAKV--------AKEFTENCGRKRVKSSMDVELAVDAFEQSEGL 113 P+ + +NGF + + K+ + +D F L Sbjct: 51 PVVNFSAYGDFNGFPRRVREGCQRTGVKLIDVPNGRKDASDKA-----ILIDMFLFV--L 103 Query: 114 E-----HLVIFSGDGCFTTLVAALQRKVKKVTIV 142 + +V+ SGD F + L ++ V +V Sbjct: 104 DNKPPATIVLVSGDVDFAPALHILGQRGYTVILV 137 >gi|186683222|ref|YP_001866418.1| hypothetical protein Npun_F2944 [Nostoc punctiforme PCC 73102] gi|186465674|gb|ACC81475.1| conserved hypothetical protein [Nostoc punctiforme PCC 73102] Length = 186 Score = 37.8 bits (87), Expect = 0.63, Method: Composition-based stats. Identities = 28/192 (14%), Positives = 65/192 (33%), Gaps = 52/192 (27%) Query: 7 KIALFIDGANLYASSKALG------------------------FDIDYRKLLKAF--RSR 40 KI ++D +NL+ + L + +DY +L + + Sbjct: 2 KIFTYVDNSNLFIEGRRLSAVNKRIDGVGNIYEAINLKIFDNDWYMDYGRLHEFLCGTEK 61 Query: 41 AIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDV 100 + + + + D++ GF V + + G+++ +D Sbjct: 62 SEIGGTRLWGSPPPKDT--------FWDYVKSKGFNVQT-----YERSKGKEKK---VDT 105 Query: 101 ELAVDAFEQSEGL-----EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQ 155 +A + S + + +VI +GD + + L KV + A+ + Sbjct: 106 AIAYQIGKDSGKIIDKENDIIVIAAGDKDYMPCIDDLTSDGFKVHVA-----FWGHAARE 160 Query: 156 LRRQADYFMDLA 167 ++ A F++L Sbjct: 161 VQEAATKFINLD 172 >gi|120599630|ref|YP_964204.1| inorganic polyphosphate/ATP-NAD kinase [Shewanella sp. W3-18-1] gi|146292376|ref|YP_001182800.1| inorganic polyphosphate/ATP-NAD kinase [Shewanella putrefaciens CN-32] gi|189037392|sp|A4Y4W8|PPNK_SHEPC RecName: Full=Probable inorganic polyphosphate/ATP-NAD kinase; Short=Poly(P)/ATP NAD kinase gi|189037394|sp|A1RLV5|PPNK_SHESW RecName: Full=Probable inorganic polyphosphate/ATP-NAD kinase; Short=Poly(P)/ATP NAD kinase gi|120559723|gb|ABM25650.1| NAD(+) kinase [Shewanella sp. W3-18-1] gi|145564066|gb|ABP75001.1| NAD(+) kinase [Shewanella putrefaciens CN-32] gi|319425676|gb|ADV53750.1| ATP-NAD/AcoX kinase [Shewanella putrefaciens 200] Length = 309 Score = 37.8 bits (87), Expect = 0.63, Method: Composition-based stats. Identities = 23/107 (21%), Positives = 37/107 (34%), Gaps = 16/107 (14%) Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 L L WL G++V+A+ R + ++E AVD E + ++ Sbjct: 38 QTLKRLHHWLTMQGYEVLAEE---------RVSTELGTNIE-AVDLLEIGARCDLAIVVG 87 Query: 121 GDGCFTTLVAALQRK-----VKKVTIVSTVLSDPSMASDQ-LRRQAD 161 GDG L R + + P A ++ L R D Sbjct: 88 GDGNMLGAARVLARFDLGVIGVNRGNLGFLTDLPPDAFEEALARVLD 134 >gi|308050612|ref|YP_003914178.1| NAD(+) kinase [Ferrimonas balearica DSM 9799] gi|307632802|gb|ADN77104.1| NAD(+) kinase [Ferrimonas balearica DSM 9799] Length = 309 Score = 37.8 bits (87), Expect = 0.64, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 29/91 (31%), Gaps = 13/91 (14%) Query: 51 TVVGDPEQQFSPLHPLLDWLHYNGFQVVA--KVAKEFTENCGRKRVKSSMDVELAVDAFE 108 D + L L WL G++V+ +VAK + + VD Sbjct: 26 IGKPDHDGANQTLTRLFYWLRKQGYEVLLEQRVAKHLGCDKAER-----------VDLTT 74 Query: 109 QSEGLEHLVIFSGDGCFTTLVAALQRKVKKV 139 + + ++ GDG L R V Sbjct: 75 LGQRCDLAIVVGGDGNMLGAARVLSRFDVAV 105 >gi|113971068|ref|YP_734861.1| inorganic polyphosphate/ATP-NAD kinase [Shewanella sp. MR-4] gi|123324829|sp|Q0HGL3|PPNK_SHESM RecName: Full=Probable inorganic polyphosphate/ATP-NAD kinase; Short=Poly(P)/ATP NAD kinase gi|113885752|gb|ABI39804.1| NAD(+) kinase [Shewanella sp. MR-4] Length = 309 Score = 37.8 bits (87), Expect = 0.64, Method: Composition-based stats. Identities = 18/79 (22%), Positives = 25/79 (31%), Gaps = 10/79 (12%) Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 L L WL G++V+ + G V AVD E + ++ Sbjct: 38 QTLKRLHHWLTVQGYEVLVEE--RVASELGTHIV--------AVDLLEIGARCDLAIVVG 87 Query: 121 GDGCFTTLVAALQRKVKKV 139 GDG L R V Sbjct: 88 GDGNMLGAARVLARFDVGV 106 >gi|255318128|ref|ZP_05359372.1| FAD/FMN-binding/pyridine nucleotide-disulphide oxidoreductase family protein [Acinetobacter radioresistens SK82] gi|255304839|gb|EET84012.1| FAD/FMN-binding/pyridine nucleotide-disulphide oxidoreductase family protein [Acinetobacter radioresistens SK82] Length = 687 Score = 37.8 bits (87), Expect = 0.65, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 36/93 (38%), Gaps = 8/93 (8%) Query: 69 WLHYNGFQVVAKVAKEFTENCGRKRVKSSMD--VELAVDAFEQSEGLEHLVIFSGDGCFT 126 W+H G + K G K D + + VD ++++VI +G +T Sbjct: 593 WIHRTGLK-----HKHVQMMSGVNYEKID-DQGLHITVDGKPMLLEVDNVVICAGQESYT 646 Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQ 159 + LQ K+V ++ + + + RQ Sbjct: 647 AMFEQLQADGKRVHLIGGAREAGELDAKRAIRQ 679 >gi|332673942|gb|AEE70759.1| conserved hypothetical protein [Helicobacter pylori 83] Length = 266 Score = 37.8 bits (87), Expect = 0.65, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 23/47 (48%), Gaps = 1/47 (2%) Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161 +++FS D F ++ A K +V ++ + P++ LR+ D Sbjct: 178 CILLFSKDTDFVPVLEATWEKGFQV-FIANIQEGPNLVPPDLRKSCD 223 >gi|262379821|ref|ZP_06072977.1| FAD/FMN-binding/pyridine nucleotide-disulphide oxidoreductase [Acinetobacter radioresistens SH164] gi|262299278|gb|EEY87191.1| FAD/FMN-binding/pyridine nucleotide-disulphide oxidoreductase [Acinetobacter radioresistens SH164] Length = 674 Score = 37.8 bits (87), Expect = 0.66, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 36/93 (38%), Gaps = 8/93 (8%) Query: 69 WLHYNGFQVVAKVAKEFTENCGRKRVKSSMD--VELAVDAFEQSEGLEHLVIFSGDGCFT 126 W+H G + K G K D + + VD ++++VI +G +T Sbjct: 580 WIHRTGLK-----HKHVQMMSGVNYEKID-DQGLHITVDGKPMLLEVDNVVICAGQESYT 633 Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQ 159 + LQ K+V ++ + + + RQ Sbjct: 634 AMFEQLQADGKRVHLIGGAREAGELDAKRAIRQ 666 >gi|305666922|ref|YP_003863209.1| NADH:flavin oxidoreductase [Maribacter sp. HTCC2170] gi|88709150|gb|EAR01384.1| NADH:flavin oxidoreductase, Old Yellow Enzyme family protein [Maribacter sp. HTCC2170] Length = 675 Score = 37.8 bits (87), Expect = 0.66, Method: Composition-based stats. Identities = 10/50 (20%), Positives = 23/50 (46%) Query: 113 LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADY 162 +++++I +G F L+ L+ K KV ++ + + + QA Sbjct: 621 VDNVIICAGQLPFKELLEPLKAKGIKVHVIGGADVAAELDAKRAINQASR 670 >gi|261838472|gb|ACX98238.1| hypothetical protein KHP_1042 [Helicobacter pylori 51] Length = 215 Score = 37.8 bits (87), Expect = 0.68, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 22/47 (46%), Gaps = 1/47 (2%) Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161 +++FS D F ++ A K V ++ + P++ LR+ D Sbjct: 126 CILLFSKDTDFVPVLEAAWEKGFGV-FIANIQEGPNLVPPDLRKSCD 171 >gi|52842281|ref|YP_096080.1| hypothetical protein lpg2067 [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52629392|gb|AAU28133.1| hypothetical protein lpg2067 [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 260 Score = 37.8 bits (87), Expect = 0.69, Method: Composition-based stats. Identities = 29/168 (17%), Positives = 53/168 (31%), Gaps = 29/168 (17%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 K+A+ ID N ++A+ D LL I Y Q+ + Sbjct: 12 KLAVLIDADN----ARAVIID----GLLTEIAGYGDAIVRRIYGDFTLPSSAQWKKVLH- 62 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGC 124 + K ++F G+ D L +DA + + I S D Sbjct: 63 ---------KYAIKPVQQFAFTSGKNAT----DSALIIDAMDLLYTHRFGGFCIVSSDSD 109 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 FT+L ++ + +V + + R + F+ L+ Sbjct: 110 FTSLANRIREEGLQV----FGFGEKK-TPEAFRNACNKFIFTEVLRPV 152 >gi|21360746|gb|AAM49687.1| phoshoribosylaminoimiazolcarboxylase ATPase subunit [Enterococcus faecium] Length = 164 Score = 37.4 bits (86), Expect = 0.75, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 50/146 (34%), Gaps = 28/146 (19%) Query: 31 RKLLKA-FRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENC 89 +LL+ F ++ A Y T V + D + G+ V K + + Sbjct: 27 DRLLEKSFLETNNIVIAPYATIVSPTD---------IQDAIDGIGYPCVLKTTRGGYDGK 77 Query: 90 GRKRVKSSMDVELAVDAFEQSEGLEHLVI-----------FSGDGCFT--TLVAALQRKV 136 G+ +KS +D+ A+D + + I +G G FT +V + Sbjct: 78 GQYVLKSRVDLAPAMDLLREGTCVLEAWIPFEKEISIMVAGNGQGDFTTFPVVENIHHNN 137 Query: 137 KKVTIVSTVLSDPSMASDQLRRQADY 162 ++ P+ + +A+ Sbjct: 138 ILHETIA-----PAAIDQDVIEEAER 158 >gi|30679459|ref|NP_179158.2| unknown protein [Arabidopsis thaliana] gi|34365745|gb|AAQ65184.1| At2g15560 [Arabidopsis thaliana] gi|51968780|dbj|BAD43082.1| unknown protein [Arabidopsis thaliana] gi|51970842|dbj|BAD44113.1| unknown protein [Arabidopsis thaliana] gi|110738852|dbj|BAF01349.1| hypothetical protein [Arabidopsis thaliana] gi|330251322|gb|AEC06416.1| Putative endonuclease or glycosyl hydrolase [Arabidopsis thaliana] Length = 489 Score = 37.4 bits (86), Expect = 0.75, Method: Composition-based stats. Identities = 16/94 (17%), Positives = 31/94 (32%), Gaps = 20/94 (21%) Query: 62 PLHPLLDWLHYNGFQVVAKV--------AKEFTENCGRKRVKSSMDVELAVDAFEQSEGL 113 P+ + +NGF + + K+ + +D F L Sbjct: 87 PVVNFSAYGDFNGFPRRVREGCQRTGVKLIDVPNGRKDASDKA-----ILIDMFLFV--L 139 Query: 114 E-----HLVIFSGDGCFTTLVAALQRKVKKVTIV 142 + +V+ SGD F + L ++ V +V Sbjct: 140 DNKPPATIVLVSGDVDFAPALHILGQRGYTVILV 173 >gi|150249496|gb|ABR67774.1| unknown [Saccharothrix mutabilis subsp. capreolus] Length = 278 Score = 37.4 bits (86), Expect = 0.76, Method: Composition-based stats. Identities = 31/151 (20%), Positives = 55/151 (36%), Gaps = 33/151 (21%) Query: 4 PREKIALFIDG---ANL--YASS---KALGFDID--YRKLLKAFR-------SRAIVIRA 46 E+I +F DG A L Y +S +A +D + L +V A Sbjct: 3 NGERIGVFYDGTWFAYLSDYFASVHPRAARVSLDGFHDALRWYVHTVTHQPLDECVVSEA 62 Query: 47 YYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDA 106 +Y + P F V+A + + +DV LA++A Sbjct: 63 HYVRGRIDTPAVAFDA--------------VLAAAGVVRHDLPLHAGKEKGVDVHLALEA 108 Query: 107 FEQSEGLEH--LVIFSGDGCFTTLVAALQRK 135 +E++ + +V+ +GD F L L+ + Sbjct: 109 WERATSVPLRWVVLVTGDADFAPLATRLKTR 139 >gi|21360740|gb|AAM49684.1| phoshoribosylaminoimiazolcarboxylase ATPase subunit [Enterococcus faecium] Length = 164 Score = 37.4 bits (86), Expect = 0.76, Method: Composition-based stats. Identities = 26/146 (17%), Positives = 50/146 (34%), Gaps = 28/146 (19%) Query: 31 RKLLKA-FRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENC 89 +LL+ F ++ A Y T V + D + G+ V K + + Sbjct: 27 DRLLEKSFLETNNIVIAPYATIVSPTD---------IQDAIDGIGYPCVLKTTRGGYDGR 77 Query: 90 GRKRVKSSMDVELAVDAFEQSEGLEHLVI-----------FSGDGCFT--TLVAALQRKV 136 G+ +KS D+ A+D + + I +G G FT +V + R Sbjct: 78 GQYVLKSRADLAPAMDLLREGTCVLEAWIPFEKEISIMVAGNGQGDFTTFPVVENIHRNN 137 Query: 137 KKVTIVSTVLSDPSMASDQLRRQADY 162 ++ P+ + +A+ Sbjct: 138 ILHETIA-----PAAIDQDVIEEAER 158 >gi|15612138|ref|NP_223790.1| hypothetical protein jhp1073 [Helicobacter pylori J99] gi|4155667|gb|AAD06653.1| putative [Helicobacter pylori J99] Length = 285 Score = 37.4 bits (86), Expect = 0.76, Method: Composition-based stats. Identities = 23/129 (17%), Positives = 51/129 (39%), Gaps = 23/129 (17%) Query: 76 QVVAKVAKE---FTENCGRKRVKSSMDVELAV----------DAFEQSE--------GLE 114 QV +V + F + +RV ++ E+ + DA + L Sbjct: 137 QVKLRVGRVRFMFKDMPKDQRVHGGLEAEILIPHLELRQKQIDALLAHDITKLYCTKPLG 196 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD-YFMDLAYLKNEI 173 +V+FS D F ++ A K +V ++ + P+ L++ + ++A + + + Sbjct: 197 CVVLFSKDTDFVPVLEAAWEKGFEV-FIANIQESPNSVPSDLKKSCNVRERNVAEIVDNL 255 Query: 174 ARDPDEDKK 182 ++ KK Sbjct: 256 PKNQYTPKK 264 >gi|71756201|ref|XP_829015.1| hypothetical protein [Trypanosoma brucei TREU927] gi|70834401|gb|EAN79903.1| nucleic acid binding protein, putative [Trypanosoma brucei] gi|261334955|emb|CBH17949.1| nucleic acid binding protein, putative [Trypanosoma brucei gambiense DAL972] Length = 516 Score = 37.4 bits (86), Expect = 0.77, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 25/61 (40%), Gaps = 3/61 (4%) Query: 78 VAKVAKEFT-ENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDGCFTTLVAALQR 134 K K +T + G V++ +DV +A E + +V+ GD V+ Q Sbjct: 394 RMKRQKGYTGDGPGYVWVQTGVDVAIATCVIETFLRRQFDQVVLLCGDSDVYPAVSFCQE 453 Query: 135 K 135 + Sbjct: 454 Q 454 >gi|237751873|ref|ZP_04582353.1| conserved hypothetical protein [Helicobacter winghamensis ATCC BAA-430] gi|229376706|gb|EEO26797.1| conserved hypothetical protein [Helicobacter winghamensis ATCC BAA-430] Length = 242 Score = 37.4 bits (86), Expect = 0.79, Method: Composition-based stats. Identities = 17/114 (14%), Positives = 37/114 (32%), Gaps = 10/114 (8%) Query: 31 RKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCG 90 +LL R + Y V + S D+ + E T Sbjct: 103 SELLNHLRKQP-------YFAVRLGEIDENSFQWKFRDYDKFRKILRKEIDIGELTNEDF 155 Query: 91 RKRVK-SSMDVELAVDAFEQSE--GLEHLVIFSGDGCFTTLVAALQRKVKKVTI 141 +K +D+++ +D + E +++ + D F V +++ V + Sbjct: 156 VLDIKQKGVDMKIGLDIATLANKHQAEKIILITADSDFIPAVKHARKEGIIVQL 209 >gi|227547784|ref|ZP_03977833.1| conserved hypothetical protein [Corynebacterium lipophiloflavum DSM 44291] gi|227080150|gb|EEI18113.1| conserved hypothetical protein [Corynebacterium lipophiloflavum DSM 44291] Length = 238 Score = 37.4 bits (86), Expect = 0.79, Method: Composition-based stats. Identities = 24/135 (17%), Positives = 41/135 (30%), Gaps = 25/135 (18%) Query: 50 TTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ 109 T Q + P ++ L GF V AK + + + Sbjct: 78 TVFTNIAAQGADVVRPWVEALRNVGFAVFAKPKSDDDSDVDQD-------------MLAH 124 Query: 110 SEGL-EHLVI-----FSGDG-CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADY 162 E + V+ S DG F + L + VT++ S++ Sbjct: 125 IERRRDEGVLRGLVVASADGQNFMPAIEDLLNEGIPVTVLGFHEHASWAVSNEEID---- 180 Query: 163 FMDLAYLKNEIARDP 177 F+DL + R+P Sbjct: 181 FVDLEDIPGVF-REP 194 >gi|21360736|gb|AAM49682.1| phoshoribosylaminoimiazolcarboxylase ATPase subunit [Enterococcus faecium] Length = 164 Score = 37.4 bits (86), Expect = 0.79, Method: Composition-based stats. Identities = 26/146 (17%), Positives = 50/146 (34%), Gaps = 28/146 (19%) Query: 31 RKLLKA-FRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENC 89 +LL+ F ++ A Y T V + D + G+ V K + + Sbjct: 27 DRLLEKSFLETNNIVIAPYATIVSPTD---------IQDAIDGIGYPCVLKTTRGGYDGK 77 Query: 90 GRKRVKSSMDVELAVDAFEQSEGLEHLVI-----------FSGDGCFT--TLVAALQRKV 136 G+ +KS D+ A+D + + I +G G FT +V + R Sbjct: 78 GQYVLKSRADLAPAMDLLREGTCVLEAWIPFEKEISIMVAGNGQGDFTTFPVVENIHRNN 137 Query: 137 KKVTIVSTVLSDPSMASDQLRRQADY 162 ++ P+ + +A+ Sbjct: 138 ILHETIA-----PAAIDQDVIEEAER 158 >gi|229844492|ref|ZP_04464632.1| hypothetical protein CGSHi6P18H1_09260 [Haemophilus influenzae 6P18H1] gi|229812741|gb|EEP48430.1| hypothetical protein CGSHi6P18H1_09260 [Haemophilus influenzae 6P18H1] Length = 273 Score = 37.4 bits (86), Expect = 0.79, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 20/44 (45%), Gaps = 2/44 (4%) Query: 96 SSMDVELAVDA--FEQSEGLEHLVIFSGDGCFTTLVAALQRKVK 137 S+DV+L +D + ++ +V+ +GD F + K Sbjct: 160 KSVDVKLGMDITILSYEKLVDVIVLIAGDSDFVPAAKQARIKGV 203 >gi|298528860|ref|ZP_07016263.1| conserved hypothetical protein [Desulfonatronospira thiodismutans ASO3-1] gi|298510296|gb|EFI34199.1| conserved hypothetical protein [Desulfonatronospira thiodismutans ASO3-1] Length = 213 Score = 37.4 bits (86), Expect = 0.80, Method: Composition-based stats. Identities = 11/67 (16%), Positives = 29/67 (43%), Gaps = 7/67 (10%) Query: 100 VELAVDAFEQSEGL--EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLR 157 V++A+D + + V+ + + ++++ +V + + + S +L Sbjct: 143 VKMALDMVTLAARKAGDMFVLITDRTDLVPAMEMVRQEGVQVCL----DNMHAPVSIELS 198 Query: 158 RQADYFM 164 QAD F+ Sbjct: 199 EQAD-FI 204 >gi|320162088|ref|YP_004175313.1| hypothetical protein ANT_26870 [Anaerolinea thermophila UNI-1] gi|319995942|dbj|BAJ64713.1| hypothetical protein ANT_26870 [Anaerolinea thermophila UNI-1] Length = 271 Score = 37.4 bits (86), Expect = 0.81, Method: Composition-based stats. Identities = 31/163 (19%), Positives = 55/163 (33%), Gaps = 35/163 (21%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 +IA+ IDG N + +L D+ L VI Y Sbjct: 12 RIAMLIDGDN---AQPSLIGDM-----LAETSKYGTVIIRRIYG---------------- 47 Query: 67 LDWLHYN--GFQ-VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSG 121 DW N G++ V+ A + + K++ D + +DA + + +E + S Sbjct: 48 -DWTTANMNGWKEVLQTYAIQPIQQFRYTIGKNATDSAMIIDAMDILYEDRVEGFCLVSS 106 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 D +T L ++ K + + S D F+ Sbjct: 107 DSDYTRLATRIREKG-----IFVMGIGKSTTPRAFVNACDVFV 144 >gi|302692520|ref|XP_003035939.1| hypothetical protein SCHCODRAFT_105541 [Schizophyllum commune H4-8] gi|300109635|gb|EFJ01037.1| hypothetical protein SCHCODRAFT_105541 [Schizophyllum commune H4-8] Length = 642 Score = 37.4 bits (86), Expect = 0.81, Method: Composition-based stats. Identities = 8/36 (22%), Positives = 18/36 (50%), Gaps = 2/36 (5%) Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS 150 +++ +GD F V+ L+R+ + +V + P Sbjct: 12 TIILITGDRDFAYAVSLLRRR--RYNVVLICHAYPG 45 >gi|57237868|ref|YP_179116.1| hypothetical protein CJE1124 [Campylobacter jejuni RM1221] gi|57166672|gb|AAW35451.1| conserved domain protein [Campylobacter jejuni RM1221] Length = 180 Score = 37.4 bits (86), Expect = 0.81, Method: Composition-based stats. Identities = 8/53 (15%), Positives = 24/53 (45%), Gaps = 3/53 (5%) Query: 91 RKRVKSSMDVELAVDAFEQSE--GLEHLVIFSGDGCFTTLVAALQRKVKKVTI 141 + K +D+++ +D + +E +++ + D F V +++ V + Sbjct: 96 DIKQKG-VDMKIGLDIATLANKHQVEKIILITSDSDFVPAVKHARKEGLIVQL 147 >gi|294617720|ref|ZP_06697343.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit [Enterococcus faecium E1679] gi|291596031|gb|EFF27301.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit [Enterococcus faecium E1679] Length = 374 Score = 37.4 bits (86), Expect = 0.81, Method: Composition-based stats. Identities = 24/146 (16%), Positives = 48/146 (32%), Gaps = 28/146 (19%) Query: 31 RKLLKA-FRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENC 89 +LL+ F ++ A Y T V + D + G+ V K + + Sbjct: 106 DRLLEKSFLETNNIVIAPYATIVSPTD---------IQDAIDGIGYPCVLKTTRGGYDGK 156 Query: 90 GRKRVKSSMDVELAVDAFEQSEGLEHLVI-----------FSGDGCFT--TLVAALQRKV 136 G+ +KS D+ A+D + + I +G G F +V + Sbjct: 157 GQYVLKSRADLAPAMDLLREGTCVLEAWIPFEKEISIMVAGNGQGDFMTFPVVENIHHNN 216 Query: 137 KKVTIVSTVLSDPSMASDQLRRQADY 162 ++ P+ + +A+ Sbjct: 217 ILHETIA-----PAAIDQDVIEEAER 237 >gi|302383830|ref|YP_003819653.1| hypothetical protein Bresu_2723 [Brevundimonas subvibrioides ATCC 15264] gi|302194458|gb|ADL02030.1| conserved hypothetical protein [Brevundimonas subvibrioides ATCC 15264] Length = 256 Score = 37.4 bits (86), Expect = 0.83, Method: Composition-based stats. Identities = 25/160 (15%), Positives = 45/160 (28%), Gaps = 13/160 (8%) Query: 5 REKIALFIDGANLYASSKALGFD----IDYRKL-LKAFRSRAIVIRAYYYTTVVGDPEQQ 59 R++ L++DG NL+ + L +D L + A + + + + Sbjct: 25 RKRARLYVDGFNLHHAILDLNRHELLWLDLMALGRALLPPGERLTGAVWVSAHRPQRKDR 84 Query: 60 FSPLHPLLDWLHY------NGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDA--FEQSE 111 + L G VV + + DV LA+ ++ Sbjct: 85 MQAMMAYEAALVARDVRCLMGHFVVHGDHCHACGHQWMDATEKQSDVNLALSIAADAAAD 144 Query: 112 GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSM 151 + I + DG L IVS Sbjct: 145 RFDTAYIVTTDGDHAATTRFLHESYPHKRIVSVAPPGRGH 184 >gi|158314589|ref|YP_001507097.1| hypothetical protein Franean1_2768 [Frankia sp. EAN1pec] gi|158109994|gb|ABW12191.1| protein of unknown function DUF88 [Frankia sp. EAN1pec] Length = 272 Score = 37.4 bits (86), Expect = 0.88, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 60/167 (35%), Gaps = 29/167 (17%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP--EQQFSP 62 R ++A+ ID N AS L++ + A + T V + + Sbjct: 8 RARLAVLIDADNAQAS------------LVEHVLAE----VAMFGTAHVKRAYGDWTSTH 51 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122 L D L + Q ++F G+ ++M ++ A+D +E L+ + S D Sbjct: 52 LRSWKDQLLAHSIQ----PIQQFAHTSGKNATDAAMVID-AMDLLYGAE-LDGFCLISSD 105 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 FT L + L+ + V + S + D F + L Sbjct: 106 SDFTRLASRLRESGRIVYGFGERKTPRSFVA-----ACDTFTYVENL 147 >gi|149928204|ref|ZP_01916449.1| hypothetical protein LMED105_00350 [Limnobacter sp. MED105] gi|149823095|gb|EDM82335.1| hypothetical protein LMED105_00350 [Limnobacter sp. MED105] Length = 211 Score = 37.4 bits (86), Expect = 0.89, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 2/57 (3%) Query: 85 FTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTI 141 FT + K ++ M V+LA ++ +V+ +GDG F++ L+ + V + Sbjct: 109 FTPDSHPKGIELRMGVDLAT--LAYKRQVQQVVLLTGDGAFSSAAELLRHEGVDVVL 163 >gi|330836836|ref|YP_004411477.1| hypothetical protein Spico_0871 [Spirochaeta coccoides DSM 17374] gi|329748739|gb|AEC02095.1| Domain of unknown function DUF88 [Spirochaeta coccoides DSM 17374] Length = 265 Score = 37.4 bits (86), Expect = 0.90, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 29/54 (53%), Gaps = 4/54 (7%) Query: 94 VKSSMDVELAVDAFEQ----SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVS 143 K+ D+ ++++A E + ++ V + D FT ++ L++ K+V +V+ Sbjct: 78 YKNRADLIISLEALETIITNTPSIDRYVFITSDSDFTVIMEMLRKYGKEVYLVT 131 >gi|226363405|ref|YP_002781187.1| hypothetical protein ROP_39950 [Rhodococcus opacus B4] gi|226241894|dbj|BAH52242.1| hypothetical protein [Rhodococcus opacus B4] Length = 208 Score = 37.4 bits (86), Expect = 0.91, Method: Composition-based stats. Identities = 19/170 (11%), Positives = 56/170 (32%), Gaps = 35/170 (20%) Query: 6 EKIALFIDGANLYASSKALGFDID------YRKLLKAFRSRAIVIRAYY----------- 48 +++A+ +D N++ +++ + LL +++A Sbjct: 5 QRVAVVVDYQNMHLTARG---KFTPEGTPTHESLLHPLLLAQQILKARANAKGADTPPAD 61 Query: 49 ------YTTVVGDPEQQFSPLHP---LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMD 99 Y + + S +W + +V + + + + +D Sbjct: 62 IAKVEVYRGLPSNEHDSTSYRRSQAQRAEWTRDSRVEVTYRPLRYRYVHNILTPQEKGVD 121 Query: 100 VELAVDAFE--QSEGLEHLVIFSGDGCFTTLVAAL----QRKVKKVTIVS 143 V +A++ + S + +++ + D + Q + +KV I + Sbjct: 122 VLVALNFVQAVVSGEYDVVILAAHDTDLEPALEMALDTPQAQARKVAIET 171 >gi|114048298|ref|YP_738848.1| inorganic polyphosphate/ATP-NAD kinase [Shewanella sp. MR-7] gi|123030438|sp|Q0HSW4|PPNK_SHESR RecName: Full=Probable inorganic polyphosphate/ATP-NAD kinase; Short=Poly(P)/ATP NAD kinase gi|113889740|gb|ABI43791.1| NAD(+) kinase [Shewanella sp. MR-7] Length = 309 Score = 37.4 bits (86), Expect = 0.93, Method: Composition-based stats. Identities = 18/79 (22%), Positives = 25/79 (31%), Gaps = 10/79 (12%) Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 L L WL G++V+ + G V AVD E + ++ Sbjct: 38 QTLKRLHHWLTVQGYEVLVEE--RVASELGTNIV--------AVDLLEIGARCDLAIVVG 87 Query: 121 GDGCFTTLVAALQRKVKKV 139 GDG L R V Sbjct: 88 GDGNMLGAARVLARFDVGV 106 >gi|302549678|ref|ZP_07302020.1| dihydrolipoyl dehydrogenase [Streptomyces viridochromogenes DSM 40736] gi|302467296|gb|EFL30389.1| dihydrolipoyl dehydrogenase [Streptomyces viridochromogenes DSM 40736] Length = 470 Score = 37.0 bits (85), Expect = 1.0, Method: Composition-based stats. Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 1/41 (2%) Query: 106 AFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVL 146 EQ E + +V+ SG G + V A Q K+V IV Sbjct: 1 MVEQDERFDVVVLGSGPGGYVAAVRAAQ-LGKRVAIVEEKY 40 >gi|309811372|ref|ZP_07705159.1| conserved hypothetical protein [Dermacoccus sp. Ellin185] gi|308434679|gb|EFP58524.1| conserved hypothetical protein [Dermacoccus sp. Ellin185] Length = 186 Score = 37.0 bits (85), Expect = 1.0, Method: Composition-based stats. Identities = 31/173 (17%), Positives = 58/173 (33%), Gaps = 34/173 (19%) Query: 10 LFIDGANLYAS------SKALGFDIDYR--KLLKAFRSR--AIVIRAYYYTTVVGDPEQQ 59 L IDG N+ A+ + D R +LLK + + ++ + Sbjct: 8 LLIDGENIDATLGTSILGRRPHPDERPRWDRLLKFAQRQWHQDAKGLFFLAANGPELPMA 67 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIF 119 + L G+Q + + G K V M ++ +DA + +++ Sbjct: 68 ------FIQALTALGYQPI-----PLSGAEGEKVV--DMAIQKTLDALVTLQA--DVMLV 112 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVL----SDPSMASDQLRRQADYFMDLAY 168 S DG F + L +KV ++ + + L F DL + Sbjct: 113 SHDGDFLPQLEPLLGGSRKVGLIGFKEFRNAGFSPLEAQGL-----EFFDLEH 160 >gi|298528011|ref|ZP_07015415.1| conserved hypothetical protein [Desulfonatronospira thiodismutans ASO3-1] gi|298511663|gb|EFI35565.1| conserved hypothetical protein [Desulfonatronospira thiodismutans ASO3-1] Length = 212 Score = 37.0 bits (85), Expect = 1.1, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 77/210 (36%), Gaps = 57/210 (27%) Query: 5 REKIALFIDGANLYASSKALGFD-IDY--RKLLK----AFRSRAIVIRAYYY-------- 49 K+ +F DG ++ + L + Y R++ + R + ++R YYY Sbjct: 1 MRKVIIFTDG--MFMRRRVLERNHFLYKPREIREYCQKHLRQKDYLVRIYYYDCRPLQAR 58 Query: 50 -TTVVGDPEQQFSPL------HPLLDWLHY--------------------NGFQVVAKVA 82 T+ + E FS L H L + L + G +V + Sbjct: 59 GTSPLNGKEIDFSRLESARLRHQLFEGLRHAPNFCLRLGNMEWNGRDWNIVGSKVSPLLK 118 Query: 83 KEFT-ENCGRKRVKSS-----MDVELAVDAFEQSEGL--EHLVIFSGDGCFTTLVAALQR 134 KE T ++ ++ + V++A+D + + V+ + + +++ Sbjct: 119 KEITVDDLSDSDIRPGSETTQISVKMALDMTTLAARKAGDMFVLITDRSDLVPAMEMVRQ 178 Query: 135 KVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 + ++ + + + S +L QAD F+ Sbjct: 179 EGVQICL----DNMHAPVSSELSEQAD-FI 203 >gi|207092671|ref|ZP_03240458.1| hypothetical protein HpylHP_07376 [Helicobacter pylori HPKX_438_AG0C1] Length = 120 Score = 37.0 bits (85), Expect = 1.1, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 29/69 (42%), Gaps = 2/69 (2%) Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD-YFMDLAYLKNEI 173 +++FS D F ++ A K +V ++ + P L++ D +A + ++ Sbjct: 31 CILLFSKDTDFVPVLEAAWEKGFEV-FIAKIKESPISVPSDLKKSCDVRERSVAEIVAKL 89 Query: 174 ARDPDEDKK 182 + KK Sbjct: 90 PKSQHSPKK 98 >gi|21360722|gb|AAM49675.1| phoshoribosylaminoimiazolcarboxylase ATPase subunit [Enterococcus faecium] gi|21360724|gb|AAM49676.1| phoshoribosylaminoimiazolcarboxylase ATPase subunit [Enterococcus faecium] gi|21360726|gb|AAM49677.1| phoshoribosylaminoimiazolcarboxylase ATPase subunit [Enterococcus faecium] gi|21360730|gb|AAM49679.1| phoshoribosylaminoimiazolcarboxylase ATPase subunit [Enterococcus faecium] gi|21360732|gb|AAM49680.1| phoshoribosylaminoimiazolcarboxylase ATPase subunit [Enterococcus faecium] gi|21360734|gb|AAM49681.1| phoshoribosylaminoimiazolcarboxylase ATPase subunit [Enterococcus faecium] gi|21360738|gb|AAM49683.1| phoshoribosylaminoimiazolcarboxylase ATPase subunit [Enterococcus faecium] gi|21360742|gb|AAM49685.1| phoshoribosylaminoimiazolcarboxylase ATPase subunit [Enterococcus faecium] Length = 164 Score = 37.0 bits (85), Expect = 1.1, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 49/146 (33%), Gaps = 28/146 (19%) Query: 31 RKLLKA-FRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENC 89 +LL+ F ++ A Y T V + D + G+ V K + + Sbjct: 27 DRLLEKSFLETNNIVIAPYATIVSPTD---------IQDAIDGIGYPCVLKTTRGGYDGK 77 Query: 90 GRKRVKSSMDVELAVDAFEQSEGLEHLVI-----------FSGDGCFT--TLVAALQRKV 136 G+ +KS D+ A+D + + I +G G FT +V + Sbjct: 78 GQYVLKSRADLAPAMDLLREGTCVLEAWIPFEKEISIMVAGNGQGDFTTFPVVENIHHNN 137 Query: 137 KKVTIVSTVLSDPSMASDQLRRQADY 162 ++ P+ + +A+ Sbjct: 138 ILHETIA-----PAAIDQDVIEEAER 158 >gi|317508053|ref|ZP_07965739.1| 3-phosphoshikimate 1-carboxyvinyltransferase [Segniliparus rugosus ATCC BAA-974] gi|316253649|gb|EFV13033.1| 3-phosphoshikimate 1-carboxyvinyltransferase [Segniliparus rugosus ATCC BAA-974] Length = 377 Score = 37.0 bits (85), Expect = 1.1, Method: Composition-based stats. Identities = 22/116 (18%), Positives = 39/116 (33%), Gaps = 13/116 (11%) Query: 35 KAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRV 94 K+ +RA+V+ A + + +LD L G V + + Sbjct: 66 KSITNRALVLAALASSPSRIVGTLRSRDTDLMLDALRRMGAGVRIHDDQTTVDIEPGPLR 125 Query: 95 KSSMDVELAVDAFEQSEGLEHLVIFSG----DGC-------FTTLVAALQRKVKKV 139 ++S+DV LA + +G DG T++ AL+ V Sbjct: 126 EASVDVGLAGTVMRFLPP--AAALATGAVSFDGDEQARARPLDTILNALRDLGVAV 179 >gi|256833264|ref|YP_003161991.1| hypothetical protein Jden_2050 [Jonesia denitrificans DSM 20603] gi|256686795|gb|ACV09688.1| conserved hypothetical protein [Jonesia denitrificans DSM 20603] Length = 192 Score = 37.0 bits (85), Expect = 1.2, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 56/166 (33%), Gaps = 20/166 (12%) Query: 10 LFIDGANLYASSKALGFDI-------DYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 L +DG N+ A+ LG ++ D R A + T + Sbjct: 14 LLVDGENIDAT---LGMNVLGHRPNPDERPRWDRISEFARELWGQSVTKLFFLNASSGQM 70 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122 P + L ++ + + K V M ++ +DA + +++ S D Sbjct: 71 PMPFVQALLAMDYRPI-----PLSGENHEKVV--DMGIQRTLDAIR--DRDADVLLASHD 121 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 G F + AL +KV ++ + + L + F DL Sbjct: 122 GDFIPQIEALLDGTRKVGLLCFREFVNAQMAQ-LEDKGLTFYDLED 166 >gi|325265006|ref|ZP_08131733.1| NADH oxidase [Clostridium sp. D5] gi|324029696|gb|EGB90984.1| NADH oxidase [Clostridium sp. D5] Length = 658 Score = 37.0 bits (85), Expect = 1.2, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 32/74 (43%), Gaps = 8/74 (10%) Query: 101 ELAV---DAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLR 157 E+AV D +E + VI G L K KKVT++ + + ++++ Sbjct: 505 EIAVQSKDILTGAECGDQAVIIGGGSVGCETAEYLAEKGKKVTVIELLDTP----AEKMV 560 Query: 158 RQADYFMDLAYLKN 171 A + L++LK Sbjct: 561 NVA-RTILLSHLKG 573 >gi|91772560|ref|YP_565252.1| hypothetical protein Mbur_0520 [Methanococcoides burtonii DSM 6242] gi|91711575|gb|ABE51502.1| Hypothetical protein Mbur_0520 [Methanococcoides burtonii DSM 6242] Length = 262 Score = 37.0 bits (85), Expect = 1.2, Method: Composition-based stats. Identities = 27/172 (15%), Positives = 54/172 (31%), Gaps = 33/172 (19%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 + +K+A+ ID N+++S + L Y Sbjct: 5 ESHDKLAVLIDADNVHSSI--------IKGLFDEIAK---------YGIASVKRLYGDWT 47 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSM-DVELAVDAFEQ--SEGLEHLVIF 119 L +W N + ++F+ K + D L +DA + + L+ I Sbjct: 48 GPQLSNW-KDNLHIYSIQPIQQFS-----YTAKKNATDSALIIDAMDLLYTRNLDGFCIV 101 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPS-MASDQLRRQADYFMDLAYLK 170 S D +T L ++ + V + R + F+ + L+ Sbjct: 102 SSDSDYTKLCQRIRESG------AFVYGFGEKKTPEAFRAACNKFIYVENLR 147 >gi|254443296|ref|ZP_05056772.1| hypothetical protein VDG1235_1532 [Verrucomicrobiae bacterium DG1235] gi|198257604|gb|EDY81912.1| hypothetical protein VDG1235_1532 [Verrucomicrobiae bacterium DG1235] Length = 242 Score = 37.0 bits (85), Expect = 1.2, Method: Composition-based stats. Identities = 31/165 (18%), Positives = 56/165 (33%), Gaps = 29/165 (17%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 E IAL ID N A+ ID+ ++ S V Y + Sbjct: 7 SSESIALLIDADNAPAA------KIDF--IIAELASYGSVDIRRAYGNWKKAALSGWE-- 56 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSG 121 +V+ A + ++ + K++ D+ L ++A + ++ L + S Sbjct: 57 ------------KVLHDYAIQPIQHFDIVKGKNASDMGLLIEAMDILYTKNLGTFCLVSS 104 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 D FT LV L+ K+V + + F+ L Sbjct: 105 DCDFTPLVLRLRADGKQVIGFGDAKTPAPFVA-----SCTRFLYL 144 >gi|147920970|ref|YP_685221.1| hypothetical protein RCIX466 [uncultured methanogenic archaeon RC-I] gi|110620617|emb|CAJ35895.1| conserved hypothetical protein [uncultured methanogenic archaeon RC-I] Length = 254 Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats. Identities = 27/136 (19%), Positives = 49/136 (36%), Gaps = 24/136 (17%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 + IA+ IDG N + +L ++L V Y + S Sbjct: 9 SSNKNIAMLIDGDN---AQPSL-----IEEMLSEAGKYGNVTVRRIY------GDWTMSS 54 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 ++ D+LH + FQ ++F G+ D + +DA + + ++ I S Sbjct: 55 MNSWKDYLHKHAFQ----PIQQFRYTKGKNAT----DSAMIIDAMDILYAGHVDGFCIVS 106 Query: 121 GDGCFTTLVAALQRKV 136 D +T L L+ Sbjct: 107 SDSDYTKLATRLRESG 122 >gi|257791681|ref|YP_003182287.1| hypothetical protein Elen_1934 [Eggerthella lenta DSM 2243] gi|317487854|ref|ZP_07946446.1| hypothetical protein HMPREF1023_00144 [Eggerthella sp. 1_3_56FAA] gi|325830636|ref|ZP_08164057.1| hypothetical protein HMPREF9404_5483 [Eggerthella sp. HGA1] gi|257475578|gb|ACV55898.1| protein of unknown function DUF88 [Eggerthella lenta DSM 2243] gi|316912980|gb|EFV34497.1| hypothetical protein HMPREF1023_00144 [Eggerthella sp. 1_3_56FAA] gi|325487382|gb|EGC89824.1| hypothetical protein HMPREF9404_5483 [Eggerthella sp. HGA1] Length = 552 Score = 36.6 bits (84), Expect = 1.4, Method: Composition-based stats. Identities = 33/170 (19%), Positives = 56/170 (32%), Gaps = 31/170 (18%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRK-LLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 ++ AL ID N+ S+K Y K + V Y + + Sbjct: 6 SSEKRFALLIDADNV--SAK-------YIKPITDELSKYGTVTYKRIY------GDWTLT 50 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIF 119 D L N ++F G + K++ D + +DA + + +E I Sbjct: 51 LHAKWKDALLENSIT----PIQQF----GYTQGKNATDSAMIIDAMDILYTRSVEGFCIV 102 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 S D FT L + ++ V + + R+ D F L L Sbjct: 103 SSDSDFTRLASRIRESGLTVIGMGEKKTPTPF-----RKACDIFTTLELL 147 >gi|25029253|ref|NP_739307.1| hypothetical protein CE2697 [Corynebacterium efficiens YS-314] gi|23494541|dbj|BAC19507.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] Length = 234 Score = 36.6 bits (84), Expect = 1.4, Method: Composition-based stats. Identities = 27/121 (22%), Positives = 42/121 (34%), Gaps = 25/121 (20%) Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG------LEHLV 117 P ++ L GF V AK + TE+ DV+ D L +V Sbjct: 98 RPWVEALRNVGFAVFAKP--KLTEDS---------DVD--EDMLAHIRRRFEEGVLRGVV 144 Query: 118 IFSGDG-CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 + S DG F L+ L T++ + + A F+DL + R+ Sbjct: 145 VASADGQNFRELLEELTGDGIPATVIGFHEHASWAVAHE----AIEFVDLEEIAGVF-RE 199 Query: 177 P 177 P Sbjct: 200 P 200 >gi|323484352|ref|ZP_08089719.1| hypothetical protein HMPREF9474_01470 [Clostridium symbiosum WAL-14163] gi|323692362|ref|ZP_08106599.1| maebl [Clostridium symbiosum WAL-14673] gi|323402346|gb|EGA94677.1| hypothetical protein HMPREF9474_01470 [Clostridium symbiosum WAL-14163] gi|323503582|gb|EGB19407.1| maebl [Clostridium symbiosum WAL-14673] Length = 298 Score = 36.6 bits (84), Expect = 1.4, Method: Composition-based stats. Identities = 38/182 (20%), Positives = 58/182 (31%), Gaps = 29/182 (15%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 D ++KIA+ ID N+ SK Y KL+ Y + GD Sbjct: 2 DKQDKIAVLIDAENV---SKK------YIKLI---MDEVSDYGIATYKRIYGDFTN--PS 47 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 + D L +F G+ D L +DA + S + + + Sbjct: 48 VMAWQDALRDFALT----PVFQFNYTKGKNAS----DSALIIDAMDILYSGKVNGFCLVT 99 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 D FT L L+ V + + L + F L L E + ED Sbjct: 100 SDSDFTKLAIRLREAGMIVIGMGEQK-----TPNSLVSACETFKFLDLLYQESLEEQAED 154 Query: 181 KK 182 +K Sbjct: 155 EK 156 >gi|259505747|ref|ZP_05748649.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] gi|259166655|gb|EEW51209.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] Length = 228 Score = 36.6 bits (84), Expect = 1.4, Method: Composition-based stats. Identities = 27/121 (22%), Positives = 42/121 (34%), Gaps = 25/121 (20%) Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG------LEHLV 117 P ++ L GF V AK + TE+ DV+ D L +V Sbjct: 92 RPWVEALRNVGFAVFAKP--KLTEDS---------DVD--EDMLAHIRRRFEEGVLRGVV 138 Query: 118 IFSGDG-CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 + S DG F L+ L T++ + + A F+DL + R+ Sbjct: 139 VASADGQNFRELLEELTGDGIPATVIGFHEHASWAVAHE----AIEFVDLEEIAGVF-RE 193 Query: 177 P 177 P Sbjct: 194 P 194 >gi|167770975|ref|ZP_02443028.1| hypothetical protein ANACOL_02329 [Anaerotruncus colihominis DSM 17241] gi|167667015|gb|EDS11145.1| hypothetical protein ANACOL_02329 [Anaerotruncus colihominis DSM 17241] Length = 286 Score = 36.6 bits (84), Expect = 1.4, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 30/82 (36%), Gaps = 7/82 (8%) Query: 92 KRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDP 149 K+S D + +DA + S ++ I S D FT L A L+ V + + Sbjct: 76 TTGKNSTDSAMIIDAMDILYSGQVDGFCIVSSDSDFTRLAARLRESGMIVVGMGERKTPK 135 Query: 150 SMASDQLRRQADYFMDLAYLKN 171 S S + F L L Sbjct: 136 SFIS-----ACNRFKYLDILAQ 152 >gi|317177894|dbj|BAJ55683.1| hypothetical protein HPF16_1086 [Helicobacter pylori F16] Length = 221 Score = 36.6 bits (84), Expect = 1.4, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161 +++FS D F ++ A K +V ++ + DP++ LR+ D Sbjct: 132 CILLFSKDTNFVPVLEAAWEKGFEV-FIANIQKDPNLVPPDLRKSCD 177 >gi|317012923|gb|ADU83531.1| hypothetical protein HPLT_05705 [Helicobacter pylori Lithuania75] Length = 255 Score = 36.6 bits (84), Expect = 1.4, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 22/47 (46%), Gaps = 1/47 (2%) Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161 +++FS D F ++ A K +V ++ + P++ L+ D Sbjct: 165 CILLFSKDTDFVPVLEAAWEKGFEV-FIAKIEESPNLVPPDLKDPCD 210 >gi|300716144|ref|YP_003740947.1| isochorismatase family protein RutB [Erwinia billingiae Eb661] gi|299061980|emb|CAX59096.1| Putative isochorismatase family protein RutB [Erwinia billingiae Eb661] Length = 248 Score = 36.6 bits (84), Expect = 1.5, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 53/166 (31%), Gaps = 35/166 (21%) Query: 2 FDPREKIALFIDGANLYASSKAL----GFDI--------DYRKLLKAFRSRAIVIRAYYY 49 F P + + +D N YA++ GFD+ + +KA R I+I + Sbjct: 29 FPPEQTALIVVDMQNAYATTGGYLDLAGFDVSATRPVIDNINVAVKAAREAGILII---W 85 Query: 50 TTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAV----- 104 D + +W N K ++ E G+ K D +L Sbjct: 86 FQNGWDDRYVEAGGPGSPNWHKSN----ALKTMRQNPELEGKLLAKGGWDYDLVDQLVPQ 141 Query: 105 --DAFEQSEGLEHLVIFSGDGCFTTLVAA-LQRKVKKVTIVSTVLS 147 D G F T + + L+ + + + + + + Sbjct: 142 PGDIVLPKPRY--------SGFFNTALDSMLRSRGIRHLVFTGIAT 179 >gi|85090418|ref|XP_958407.1| cation-transporting ATPase 4 [Neurospora crassa OR74A] gi|28919767|gb|EAA29171.1| cation-transporting ATPase 4 [Neurospora crassa OR74A] Length = 1318 Score = 36.6 bits (84), Expect = 1.5, Method: Composition-based stats. Identities = 23/99 (23%), Positives = 36/99 (36%), Gaps = 21/99 (21%) Query: 29 DYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDW-----LHYNGFQVVAKVAK 83 DY + K F R + A Y + + E S ++ L L + GF V+ K Sbjct: 657 DYEETYKYFTRRGSRVLALAYKQLSTENELGASKINDLKRENVEADLTFAGFLVLQCPLK 716 Query: 84 EFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122 E D + AV +S +V+ +GD Sbjct: 717 E--------------DAKQAVQMLNESSH--RVVMITGD 739 >gi|167590489|ref|ZP_02382877.1| NADH-flavin oxidoreductase/NADH oxidase [Burkholderia ubonensis Bu] Length = 673 Score = 36.6 bits (84), Expect = 1.5, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 38/91 (41%), Gaps = 9/91 (9%) Query: 69 WLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTL 128 L G ++++ V ++ G +A+D EQ+ ++++VI +G L Sbjct: 584 ALKARGVRMLSSVTYRRIDDDGFH---------VAIDGVEQTLPVDNVVICAGQEPLREL 634 Query: 129 VAALQRKVKKVTIVSTVLSDPSMASDQLRRQ 159 LQ + + ++ V + + + RQ Sbjct: 635 AEQLQAAGRTIHLIGGVCEAAELDAKRAIRQ 665 >gi|300702658|ref|YP_003744258.1| hypothetical protein RCFBP_10301 [Ralstonia solanacearum CFBP2957] gi|299070319|emb|CBJ41611.1| conserved protein of unknown function [Ralstonia solanacearum CFBP2957] Length = 309 Score = 36.6 bits (84), Expect = 1.5, Method: Composition-based stats. Identities = 30/201 (14%), Positives = 59/201 (29%), Gaps = 49/201 (24%) Query: 7 KIALFIDGANLYASS------------KALGFDIDYRKLL----KAFRSRAIVIRAYYYT 50 + +++DG N Y K + L+ + RS + ++T Sbjct: 12 RTRVYVDGYNFYYGCLKGTHHKWLDLYKLFQEHVLPSALIERDGQYVRSELLTEAVQFFT 71 Query: 51 TVVGDPEQQF-----------SPLHPLLDWLHYN--GFQVVAKVAKEFTENCG------- 90 + + + + L D G+ VAK + Sbjct: 72 ATIIERAAKAHDSVSSQARYHTALRKRHDGRIRIVEGYYSVAKARAPRIDAAKPDAWPRD 131 Query: 91 ------RKRVKSSMDVELAV----DAFEQSEGLEHLVIFSGDGCFTTLVAALQ-RKVKKV 139 + + DV LA+ DA ++H+VI S D + ++ V Sbjct: 132 CERVPIWRLEEKQTDVNLALHAYHDAMTA--QVDHVVIASNDTDLVPALRMIREHTSVTV 189 Query: 140 TIVSTVLSDPSMASDQLRRQA 160 +V ++ L + A Sbjct: 190 GLVIPTRDSERRPNEDLAKYA 210 >gi|323455527|gb|EGB11395.1| hypothetical protein AURANDRAFT_8184 [Aureococcus anophagefferens] Length = 135 Score = 36.6 bits (84), Expect = 1.5, Method: Composition-based stats. Identities = 14/71 (19%), Positives = 24/71 (33%), Gaps = 7/71 (9%) Query: 99 DVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156 D L +DA + S + V+ S D FT L ++ V V + Sbjct: 70 DSALIIDAMDLLHSNRYQAFVLVSSDADFTRLATRIREHPSTVVGVGRAQTPKGFV---- 125 Query: 157 RRQADYFMDLA 167 + F+ + Sbjct: 126 -NACNAFITIE 135 >gi|222823150|ref|YP_002574723.1| hypothetical protein Cla_0106 [Campylobacter lari RM2100] gi|222538371|gb|ACM63472.1| conserved hypothetical protein [Campylobacter lari RM2100] Length = 240 Score = 36.6 bits (84), Expect = 1.6, Method: Composition-based stats. Identities = 15/91 (16%), Positives = 31/91 (34%), Gaps = 16/91 (17%) Query: 67 LDWLHYNGFQVVAKVAKEFT---------------ENCGRKRVKS-SMDVELAVDAFEQS 110 L + N FQ K K+F + R K M + L + Sbjct: 119 LGEIDENSFQWKIKDYKKFQQLLQKEIKIDSLTEDDFVLDIRQKGVDMKIGLDIATLSIK 178 Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTI 141 + +E +++ + D F + +++ V + Sbjct: 179 KQIEKIILITADSDFIPAIKHARKEGVIVQL 209 >gi|298345622|ref|YP_003718309.1| hypothetical protein HMPREF0573_10496 [Mobiluncus curtisii ATCC 43063] gi|304390689|ref|ZP_07372642.1| conserved hypothetical protein [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315654221|ref|ZP_07907129.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 51333] gi|315657881|ref|ZP_07910761.1| conserved hypothetical protein [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|298235683|gb|ADI66815.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 43063] gi|304326445|gb|EFL93690.1| conserved hypothetical protein [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315491256|gb|EFU80873.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 51333] gi|315491678|gb|EFU81289.1| conserved hypothetical protein [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 191 Score = 36.6 bits (84), Expect = 1.6, Method: Composition-based stats. Identities = 32/179 (17%), Positives = 59/179 (32%), Gaps = 39/179 (21%) Query: 10 LFIDGANLYASSK--ALGFDIDYR------KLLKAFRS--RAIVIRAYYYTTVVGDPEQQ 59 L +DG N+ A+ LG D ++ ++ P Sbjct: 13 LLVDGENIDATLGLSVLGRRPDPDERPRWDRVRDYVSETFPGQTKGLFFLNASAHMPMT- 71 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVEL-----AVDAFEQSEGLE 114 + L +Q + +R + +DV + A+D + Sbjct: 72 ------FVQALLAMNYQPI---------PLASERDEKVVDVGIQRTLEAID----KQEYG 112 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 ++V+ S DG F + +L R VT+V S +LR + + + L+ EI Sbjct: 113 NVVLVSHDGDFEPQLRSLLRNDHDVTVVGF----EEFLSGELRTLEESGLKIVDLEREI 167 >gi|149908210|ref|ZP_01896874.1| hypothetical protein PE36_01852 [Moritella sp. PE36] gi|149808752|gb|EDM68685.1| hypothetical protein PE36_01852 [Moritella sp. PE36] Length = 304 Score = 36.6 bits (84), Expect = 1.6, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 55/164 (33%), Gaps = 32/164 (19%) Query: 9 ALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLD 68 A+ +D N + DY +L+ V + Y DP Q+ D Sbjct: 8 AVLVDAENASHN--------DYLAMLEEVEKYGTVAIKWVY-ADWTDPHQKAWK-----D 53 Query: 69 WLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GLEHLVIFSGDGCF 125 L + + ++F K + D L +DA E + + + I S DG F Sbjct: 54 IL----HETASSPKQQF------HYGKDAADHALMMDAIEVTNNNSRVNAVCIVSSDGGF 103 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 ++ ++ V + ++ R+ F+ + L Sbjct: 104 YSVAQRIREYGIHVMAIG-----KKNTPERFRKACHNFVFIDNL 142 >gi|289614411|emb|CBI58805.1| putative cation-transporting ATPase 4 [Sordaria macrospora] Length = 1345 Score = 36.3 bits (83), Expect = 1.7, Method: Composition-based stats. Identities = 37/164 (22%), Positives = 57/164 (34%), Gaps = 40/164 (24%) Query: 29 DYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDW-----LHYNGFQVVAKVAK 83 DY + K F R + A Y + + E S ++ L L + GF V+ K Sbjct: 685 DYEETYKYFTRRGSRVLALAYKQLTTENELGSSKINDLKRENVEADLTFAGFLVLQCPLK 744 Query: 84 EFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIV- 142 E D + AV +S +V+ +GD T V + +V IV Sbjct: 745 E--------------DAKQAVQMLNESSH--RVVMITGDNPLT-AVHVAR----EVEIVD 783 Query: 143 --STVLSDPSMASD---QLR-RQADYFMDLAYLKNEIARDPDED 180 +L P ++ +L R D K I DP + Sbjct: 784 RDVLILDSPEHSAHGEEKLIWRSVDD-------KVNIEVDPTKP 820 >gi|317182397|dbj|BAJ60181.1| hypothetical protein HPF57_1107 [Helicobacter pylori F57] Length = 87 Score = 36.3 bits (83), Expect = 1.7, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 22/45 (48%), Gaps = 1/45 (2%) Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161 ++FS D F ++ A K +V ++ + P++ LR+ D Sbjct: 1 MLFSKDTDFVPVLEAAWEKGFEV-FIANIQEGPNLVLPDLRKSCD 44 >gi|188527929|ref|YP_001910616.1| hypothetical protein HPSH_05910 [Helicobacter pylori Shi470] gi|188144169|gb|ACD48586.1| hypothetical protein HPSH_05910 [Helicobacter pylori Shi470] Length = 266 Score = 36.3 bits (83), Expect = 1.7, Method: Composition-based stats. Identities = 10/46 (21%), Positives = 22/46 (47%), Gaps = 1/46 (2%) Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160 +++FS D F ++ A K +V ++ + P++ LR+ Sbjct: 178 CILLFSKDTDFVPVLEAAWEKGFEV-FIANIQEGPNLVPPDLRKSC 222 >gi|46578508|ref|YP_009316.1| hypothetical protein DVU0091 [Desulfovibrio vulgaris str. Hildenborough] gi|120603909|ref|YP_968309.1| hypothetical protein Dvul_2871 [Desulfovibrio vulgaris DP4] gi|46447919|gb|AAS94575.1| conserved hypothetical protein [Desulfovibrio vulgaris str. Hildenborough] gi|120564138|gb|ABM29882.1| conserved hypothetical protein [Desulfovibrio vulgaris DP4] gi|311232435|gb|ADP85289.1| protein of unknown function DUF88 [Desulfovibrio vulgaris RCH1] Length = 240 Score = 36.3 bits (83), Expect = 1.8, Method: Composition-based stats. Identities = 25/160 (15%), Positives = 43/160 (26%), Gaps = 29/160 (18%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 ++A+ ID N A + LL + Y Q + Sbjct: 2 RLAVLIDADNAKADA--------ISDLLAEVSKFGVATVKRAYGDWTTTNLQGWKKQLH- 52 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGC 124 K A + + R K+S D + +D + + + I S D Sbjct: 53 -------------KYAIQPMQQFSYTRGKNSTDASMIIDGMDLLYTGNFDGFCIVSSDCD 99 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 FT L + V + + D F+ Sbjct: 100 FTRLATRFREAGLSVYGFGEKKTPEPFVA-----ACDRFI 134 >gi|239616633|ref|YP_002939955.1| DNA polymerase I [Kosmotoga olearia TBF 19.5.1] gi|239505464|gb|ACR78951.1| DNA polymerase I [Kosmotoga olearia TBF 19.5.1] Length = 896 Score = 36.3 bits (83), Expect = 1.9, Method: Composition-based stats. Identities = 25/157 (15%), Positives = 48/157 (30%), Gaps = 30/157 (19%) Query: 17 LYASSKALGFDI-------DYRKL---LKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 +Y +++ L I DY K R + Y + Sbjct: 36 VYGTARMLSRFIKNYIAEGDYALFAFDRKEATHRHDLFEG--YKATRAEMPDALVAQLKY 93 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126 + L GF + +++ D+ +A + + + +VI SGD Sbjct: 94 IPDLVE-GFGIKFHSV---------ATLEAD-DI-IATAVTKYRDKFDEIVIVSGDKDIL 141 Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163 LV +KV ++ V + R+ + F Sbjct: 142 QLVD------EKVKVLRFVSGLTDLEEYDRRKVEEKF 172 >gi|110596945|ref|ZP_01385235.1| conserved hypothetical protein [Chlorobium ferrooxidans DSM 13031] gi|110341632|gb|EAT60092.1| conserved hypothetical protein [Chlorobium ferrooxidans DSM 13031] Length = 247 Score = 36.3 bits (83), Expect = 1.9, Method: Composition-based stats. Identities = 26/170 (15%), Positives = 52/170 (30%), Gaps = 29/170 (17%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 + E++A+ ID N + A+ LL A Sbjct: 4 EKTERLAVLIDADN---TQPAI-----IEGLLAEVAKYG---TANVKRIYGDWTTTALRG 52 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 +V+ + + + + G + K++ D + +DA + + + I S Sbjct: 53 WK-----------EVLLEFSIQPIQQFGYTKGKNATDSAMIIDAMDLLYTGKFQGFCIVS 101 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170 D FT L + ++ V + S D F+ L+ Sbjct: 102 SDSDFTKLASRIRESGLTVYGFGEKKTPGPFVS-----ACDKFIYTEVLR 146 >gi|237708343|ref|ZP_04538824.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|229457564|gb|EEO63285.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] Length = 234 Score = 36.3 bits (83), Expect = 2.0, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 29/78 (37%), Gaps = 7/78 (8%) Query: 99 DVELAVDAFEQSE--GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156 D+ L +DA + + + + DG ++ L ++ KV + L Sbjct: 80 DIALVIDAMDILRDGRADCFCLVASDGDYSLLAQRIREAGLKV-----LGYGEGKTPVSL 134 Query: 157 RRQADYFMDLAYLKNEIA 174 R F+ +N+I+ Sbjct: 135 VRSCSVFLYADRKENKIS 152 >gi|222624986|gb|EEE59118.1| hypothetical protein OsJ_10996 [Oryza sativa Japonica Group] Length = 1004 Score = 36.3 bits (83), Expect = 2.0, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 39/109 (35%), Gaps = 15/109 (13%) Query: 57 EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEH- 115 H ++ L GF F R R K D ++ VD + ++ Sbjct: 29 RDPHRVAHGVIAALAAAGFP---GPVSIFAYGRRRPRAKDGTDKKMLVDMLFWA--FDNP 83 Query: 116 ----LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160 ++ SGD F+ L+ L+ K +L+ PS S ++ A Sbjct: 84 PPGNYLLISGDQDFSDLLHRLRMKR-----YGILLAQPSNVSSRVLAAA 127 >gi|304407033|ref|ZP_07388687.1| dihydrolipoamide dehydrogenase [Paenibacillus curdlanolyticus YK9] gi|304344020|gb|EFM09860.1| dihydrolipoamide dehydrogenase [Paenibacillus curdlanolyticus YK9] Length = 493 Score = 36.3 bits (83), Expect = 2.0, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 26/61 (42%), Gaps = 7/61 (11%) Query: 109 QSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIV------STVLSDPSMASDQLRRQADY 162 + ++ V+ G G +T + A Q + K+ I+ T L + S L R AD Sbjct: 18 MAIEVDVAVLGGGPGGYTAAIRAAQ-QGKRTAIIEMSKLGGTCLHQGCIPSKSLLRSADV 76 Query: 163 F 163 + Sbjct: 77 Y 77 >gi|320094623|ref|ZP_08026386.1| hypothetical protein HMPREF9005_0998 [Actinomyces sp. oral taxon 178 str. F0338] gi|319978441|gb|EFW10021.1| hypothetical protein HMPREF9005_0998 [Actinomyces sp. oral taxon 178 str. F0338] Length = 190 Score = 36.3 bits (83), Expect = 2.1, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 41/108 (37%), Gaps = 16/108 (14%) Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVEL--AVDAFEQSEGLEHLVIFSGD 122 + L + V+ G + +K +DV L +DA + E +++ S D Sbjct: 70 GFVQALTAMDYAVI--------PLSGPEDMKV-VDVGLQRTMDAIVKLER-GSVILASHD 119 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170 F + AL ++V ++ S QL D +++ L+ Sbjct: 120 ADFVPQIEALLDAGRRVGVMCF----REFLSSQLHDLVDRGLEIIDLE 163 >gi|320166337|gb|EFW43236.1| predicted protein [Capsaspora owczarzaki ATCC 30864] Length = 428 Score = 36.3 bits (83), Expect = 2.1, Method: Composition-based stats. Identities = 20/114 (17%), Positives = 41/114 (35%), Gaps = 7/114 (6%) Query: 22 KALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKV 81 +AL ++ LL+ F + + Y++T+ L + + +K Sbjct: 17 QALNHFVN---LLEHF-CGSRFVEVYFFTSAPDTVGPAPLHARLRLAQIKPCISPLKSKN 72 Query: 82 AK-EFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAAL 132 V++ +DV LA + L L + +GDG F ++ + Sbjct: 73 VTCTHCNAHFSTVVQAGVDVALATKVLTLVGEKALTGLFLLTGDGDFKEMLHYV 126 >gi|296125472|ref|YP_003632724.1| hypothetical protein Bmur_0422 [Brachyspira murdochii DSM 12563] gi|296017288|gb|ADG70525.1| protein of unknown function DUF88 [Brachyspira murdochii DSM 12563] Length = 455 Score = 35.9 bits (82), Expect = 2.2, Method: Composition-based stats. Identities = 31/158 (19%), Positives = 65/158 (41%), Gaps = 28/158 (17%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 +KI ++ID N+ + L F ++ + +LK YY + D + FS Sbjct: 1 MKKIGIYIDLENI----RYLDFHVNLKSMLKNILD--------YYKEQLKDEDIVFSIKK 48 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGR-------KRVKSSMDVELAVDAFE---QSEGLE 114 D + + K AK + K+ K+ D++ ++DAFE + ++ Sbjct: 49 AYGDS------KSIKKYAKHLRDLHIDIIHSVPFKKAKNMADMKSSLDAFEDFIIYKKID 102 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMA 152 ++ + D ++ ++ L R V++V+T + Sbjct: 103 IIIFVTKDVDYSIVMDKLMRHGCIVSMVTTSDNFEKNI 140 >gi|78188294|ref|YP_378632.1| hypothetical protein Cag_0316 [Chlorobium chlorochromatii CaD3] gi|78170493|gb|ABB27589.1| conserved hypothetical protein [Chlorobium chlorochromatii CaD3] Length = 264 Score = 35.9 bits (82), Expect = 2.2, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 35/93 (37%), Gaps = 7/93 (7%) Query: 83 KEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVT 140 + + G + K++ D + +DA + + I S D FT L + ++ V Sbjct: 64 IQPIQQFGYTKGKNATDSAMIIDAMDLLYTGKFHGFCIVSSDSDFTKLASRIREAGLVVY 123 Query: 141 IVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 + + S D F+ + L+ +I Sbjct: 124 GFGEKKTPSAFVS-----ACDKFIYIEVLRAKI 151 >gi|291545850|emb|CBL18958.1| Protein of unknown function DUF88 [Ruminococcus sp. SR1/5] Length = 185 Score = 35.9 bits (82), Expect = 2.3, Method: Composition-based stats. Identities = 19/82 (23%), Positives = 31/82 (37%), Gaps = 8/82 (9%) Query: 102 LAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQ 159 + +DA + S ++ I S D FT L A L+ V + + S Sbjct: 1 MIIDAMDILYSGNVDGYCIVSSDSDFTRLAARLRESGMLVLGMGEEKTPKPFIS-----A 55 Query: 160 ADYFMDLAYL-KNEIARDPDED 180 + F L L +N+ + ED Sbjct: 56 CNQFKYLDLLYRNQQEEEKKED 77 >gi|148905892|gb|ABR16108.1| unknown [Picea sitchensis] Length = 593 Score = 35.9 bits (82), Expect = 2.3, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 19/47 (40%), Gaps = 3/47 (6%) Query: 99 DVELAVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIV 142 D + VD F + +++ SGD F + L ++ V + Sbjct: 122 DKAILVDMFLFALDNPPPSTILLISGDVDFAPALHKLGQRGYTVVLA 168 >gi|323439278|gb|EGA97003.1| hypothetical protein SAO11_1871 [Staphylococcus aureus O11] gi|323442519|gb|EGB00147.1| hypothetical protein SAO46_1439 [Staphylococcus aureus O46] Length = 78 Score = 35.9 bits (82), Expect = 2.4, Method: Composition-based stats. Identities = 10/67 (14%), Positives = 24/67 (35%), Gaps = 2/67 (2%) Query: 98 MDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL- 156 M + L + + ++ +++ +GD F + + + S + S + Sbjct: 1 MKIGLDIASLSFKHQVDKIILIAGDSDFVPAAKLARTEGIDFVLDSLGADIRNNLSLHID 60 Query: 157 -RRQADY 162 RR D Sbjct: 61 GRRTCDE 67 >gi|205356564|ref|ZP_03223327.1| hypothetical protein Cj8421_0189 [Campylobacter jejuni subsp. jejuni CG8421] gi|205345569|gb|EDZ32209.1| hypothetical protein Cj8421_0189 [Campylobacter jejuni subsp. jejuni CG8421] Length = 683 Score = 35.9 bits (82), Expect = 2.4, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 57/165 (34%), Gaps = 29/165 (17%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 + IA+FID N+ +K D VI Y GD Q+ + Sbjct: 3 NKSIAIFIDAENI--PAKYAKSIFDI------ASDYGEVIIKRIY----GDWTQKN--IQ 48 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGD 122 + + + ++A F N K+S D+ L + + ++ VI S D Sbjct: 49 GWREQIAE--YSLIAMQQFNFAAN------KNSSDMYLITEIMSIFYEKNIDIFVIVSSD 100 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 +T+L+ L+ K+V + S S F L Sbjct: 101 SDYTSLIQKLRENKKQVIGMGLEKSIKSYV-----NAFSEFFYLD 140 >gi|317121267|ref|YP_004101270.1| DNA polymerase I [Thermaerobacter marianensis DSM 12885] gi|315591247|gb|ADU50543.1| DNA polymerase I [Thermaerobacter marianensis DSM 12885] Length = 1060 Score = 35.9 bits (82), Expect = 2.4, Method: Composition-based stats. Identities = 23/133 (17%), Positives = 43/133 (32%), Gaps = 29/133 (21%) Query: 48 YYTTVVGDPEQQFSPLHPLL-DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDA 106 Y + + P PL+ D L G V E + G ++ Sbjct: 79 AYKGHRPEQPDELRPQFPLVKDVLAAMGVATVEHEGFEADDLLGTLAHRAR--------- 129 Query: 107 FEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 + G++ +++ +GD LQ V ++ T L+R D Sbjct: 130 ---AAGVDRVLLVTGDRD------VLQLVGDGVEVLLTRKGI-----SDLQR-----YDE 170 Query: 167 AYLKNEIARDPDE 179 A ++ E+ P + Sbjct: 171 ARIREEMGIAPAQ 183 >gi|197287505|ref|YP_002153377.1| 2,4-dienoyl-CoA reductase [Proteus mirabilis HI4320] gi|227358232|ref|ZP_03842573.1| 2,4-dienoyl-CoA reductase [Proteus mirabilis ATCC 29906] gi|194684992|emb|CAR47215.1| 2,4-dienoyl-CoA reductase [Proteus mirabilis HI4320] gi|227161568|gb|EEI46605.1| 2,4-dienoyl-CoA reductase [Proteus mirabilis ATCC 29906] Length = 672 Score = 35.9 bits (82), Expect = 2.4, Method: Composition-based stats. Identities = 8/46 (17%), Positives = 24/46 (52%) Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQ 159 + +++ +G + L+ ALQ++ K V ++ ++ + + +Q Sbjct: 619 DSVILCTGQQSYRPLLQALQQENKTVHLIGGAKEAKALDAKRAIKQ 664 >gi|259486533|tpe|CBF84456.1| TPA: conserved hypothetical protein [Aspergillus nidulans FGSC A4] Length = 262 Score = 35.9 bits (82), Expect = 2.5, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 34/105 (32%), Gaps = 11/105 (10%) Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKV 136 + ++F G K+S D + +DA + S + S D FT L A ++ Sbjct: 62 IQPFQQFAYTNG----KNSTDSAMIIDAMDLLYSNRFGGFCLVSSDSDFTRLAARIRESG 117 Query: 137 KKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 V + + + F+ L P D+ Sbjct: 118 LTVYGFGEQKTPKPFVA-----ACNKFIYTENLSFHGELVPHPDR 157 >gi|21360728|gb|AAM49678.1| phoshoribosylaminoimiazolcarboxylase ATPase subunit [Enterococcus faecium] Length = 164 Score = 35.9 bits (82), Expect = 2.5, Method: Composition-based stats. Identities = 26/146 (17%), Positives = 50/146 (34%), Gaps = 28/146 (19%) Query: 31 RKLLKA-FRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENC 89 +LL+ F ++ A Y T V + D + G+ V K + + Sbjct: 27 DRLLEKSFLETNNIVIAPYATIVSPTD---------IQDAIDGIGYPCVLKTTRGGYDGK 77 Query: 90 GRKRVKSSMDVELAVDAFEQSEGLEHLVI-----------FSGDGCFT--TLVAALQRKV 136 G+ +KS D+ A+D + + I +G G FT +V + R Sbjct: 78 GQYVLKSRADLAPAMDLLREGTCVLEAWIPFEKEISIMVAGNGQGDFTTFPVVENIHRNN 137 Query: 137 KKVTIVSTVLSDPSMASDQLRRQADY 162 ++ P+ + +A+ Sbjct: 138 ILHETIA-----PAAIDQDVVEEAER 158 >gi|317178554|dbj|BAJ56342.1| hypothetical protein HPF30_0245 [Helicobacter pylori F30] Length = 213 Score = 35.9 bits (82), Expect = 2.5, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 23/47 (48%), Gaps = 1/47 (2%) Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161 +++FS D F ++ A K +V ++ + P++ LR+ D Sbjct: 125 CILLFSKDTDFVPVLEAAWEKDFEV-FIANIQEGPNLVPPDLRKSCD 170 >gi|167764633|ref|ZP_02436754.1| hypothetical protein BACSTE_03023 [Bacteroides stercoris ATCC 43183] gi|167697302|gb|EDS13881.1| hypothetical protein BACSTE_03023 [Bacteroides stercoris ATCC 43183] Length = 234 Score = 35.9 bits (82), Expect = 2.5, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 24/68 (35%), Gaps = 7/68 (10%) Query: 99 DVELAVDAFEQSE--GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156 D+ L +DA + + + + DG ++ L ++ KV + L Sbjct: 80 DIALVIDAMDILRDGRADCFCLVASDGDYSLLAQRIREAGLKV-----LGYGEGKTPVSL 134 Query: 157 RRQADYFM 164 R F+ Sbjct: 135 VRSCSVFL 142 >gi|67904058|ref|XP_682285.1| hypothetical protein AN9016.2 [Aspergillus nidulans FGSC A4] gi|40745192|gb|EAA64348.1| hypothetical protein AN9016.2 [Aspergillus nidulans FGSC A4] Length = 404 Score = 35.9 bits (82), Expect = 2.5, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 34/105 (32%), Gaps = 11/105 (10%) Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKV 136 + ++F G K+S D + +DA + S + S D FT L A ++ Sbjct: 204 IQPFQQFAYTNG----KNSTDSAMIIDAMDLLYSNRFGGFCLVSSDSDFTRLAARIRESG 259 Query: 137 KKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 V + + + F+ L P D+ Sbjct: 260 LTVYGFGEQKTPKPFVA-----ACNKFIYTENLSFHGELVPHPDR 299 >gi|307204444|gb|EFN83151.1| Limkain-b1 [Harpegnathos saltator] Length = 1652 Score = 35.9 bits (82), Expect = 2.5, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 30/65 (46%), Gaps = 5/65 (7%) Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI-A 174 +++ SGD F ++ L+ + K++ ++ L S+ L A+ D L + + Sbjct: 193 IILISGDINFAADLSDLRHR-KRIHVI---LLHKKNTSEALILCANEHYDFTELMEPLPS 248 Query: 175 RDPDE 179 R P + Sbjct: 249 RTPAK 253 >gi|57505164|ref|ZP_00371104.1| conserved hypothetical protein [Campylobacter coli RM2228] gi|57019057|gb|EAL55779.1| conserved hypothetical protein [Campylobacter coli RM2228] Length = 180 Score = 35.9 bits (82), Expect = 2.5, Method: Composition-based stats. Identities = 9/52 (17%), Positives = 20/52 (38%), Gaps = 1/52 (1%) Query: 91 RKRVKS-SMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTI 141 + K M V L + +E +++ + D F V +++ V + Sbjct: 96 DIKQKGVDMKVGLDIATLANKHQVEKIILITSDSDFVPAVKHARKEGLIVQL 147 >gi|296131338|ref|YP_003638588.1| hypothetical protein Cfla_3517 [Cellulomonas flavigena DSM 20109] gi|296023153|gb|ADG76389.1| conserved hypothetical protein [Cellulomonas flavigena DSM 20109] Length = 163 Score = 35.9 bits (82), Expect = 2.6, Method: Composition-based stats. Identities = 14/45 (31%), Positives = 18/45 (40%), Gaps = 2/45 (4%) Query: 96 SSMDVELA--VDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKK 138 DV L VD LV+ SGD F LV ++R + Sbjct: 83 GGADVALVDDVDLGHLVARFTWLVVASGDHAFVPLVETVRRAGVR 127 >gi|89894266|ref|YP_517753.1| hypothetical protein DSY1520 [Desulfitobacterium hafniense Y51] gi|219668679|ref|YP_002459114.1| hypothetical protein Dhaf_2652 [Desulfitobacterium hafniense DCB-2] gi|89333714|dbj|BAE83309.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219538939|gb|ACL20678.1| protein of unknown function DUF88 [Desulfitobacterium hafniense DCB-2] Length = 253 Score = 35.9 bits (82), Expect = 2.6, Method: Composition-based stats. Identities = 34/172 (19%), Positives = 58/172 (33%), Gaps = 31/172 (18%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRK-LLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 D + IA+ ID N+ S K Y K +L + I Y + Q S Sbjct: 2 DNDKNIAVLIDADNV--SEK-------YIKPILDEVSNHGIPTYKRIY---GDWTKPQLS 49 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIF 119 +L + + ++++ G+ D L +DA + S+ ++ I Sbjct: 50 SWKNVL-----LNYSIT--PIQQYSYTTGKNAT----DAALIIDAMDILYSKNVDGFCIV 98 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 S D FT L A L+ V + + + + F L L Sbjct: 99 SSDSDFTRLAARLREAGMYVIGMGEKKTPTPFIA-----ACEKFKYLEVLAG 145 >gi|297836172|ref|XP_002885968.1| hypothetical protein ARALYDRAFT_480415 [Arabidopsis lyrata subsp. lyrata] gi|297331808|gb|EFH62227.1| hypothetical protein ARALYDRAFT_480415 [Arabidopsis lyrata subsp. lyrata] Length = 451 Score = 35.9 bits (82), Expect = 2.6, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 7/49 (14%) Query: 99 DVELAVDAFEQSEGLE-----HLVIFSGDGCFTTLVAALQRKVKKVTIV 142 D + +D F L+ +++ SGD F + L ++ V +V Sbjct: 91 DKAILIDMFLFV--LDNKPPATIILVSGDVDFAPALHILGQRGYTVILV 137 >gi|258508318|ref|YP_003171069.1| dihydrolipoamide dehydrogenase [Lactobacillus rhamnosus GG] gi|257148245|emb|CAR87218.1| Pyruvate dehydrogenase complex, E3 component,dihydrolipoamide dehydrogenase [Lactobacillus rhamnosus GG] gi|259649634|dbj|BAI41796.1| pyruvate dehydrogenase complex E3 component [Lactobacillus rhamnosus GG] Length = 467 Score = 35.9 bits (82), Expect = 2.6, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 25/62 (40%), Gaps = 7/62 (11%) Query: 110 SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIV------STVLSDPSMASDQLRRQADYF 163 + L+ +VI SG G + + A +KVT++ L+ + S L + Sbjct: 7 AIDLDTVVIGSGSGGYVAAIRAA-EMGQKVTVIENTFIGGVCLNVGCIPSKALINAGHRY 65 Query: 164 MD 165 D Sbjct: 66 QD 67 >gi|294635119|ref|ZP_06713630.1| translation elongation factor Ts [Edwardsiella tarda ATCC 23685] gi|291091496|gb|EFE24057.1| translation elongation factor Ts [Edwardsiella tarda ATCC 23685] Length = 285 Score = 35.9 bits (82), Expect = 2.7, Method: Composition-based stats. Identities = 24/126 (19%), Positives = 49/126 (38%), Gaps = 27/126 (21%) Query: 76 QVVAKVAKEFTENCG-------RKRVKSSMDVELAVDAFEQSEG-----------LEHLV 117 ++ A + KE E G + V+++ D+ELA+D +S E ++ Sbjct: 3 EITASLVKELRERTGAGMMECKKALVEANGDIELAIDNMRKSGQAKAAKKAGRVAAEGVI 62 Query: 118 I--FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQ--ADYFMDLAYLKNEI 173 + S DG + +V + V+ + +D++ AD +D+ LK + Sbjct: 63 LTKVSADGKYGIIVE----MNCETDFVAKDAGFKAF-ADEVANAALADKIIDIDALKAKF 117 Query: 174 ARDPDE 179 + Sbjct: 118 EEQRTQ 123 >gi|161789278|ref|YP_001595776.1| hypothetical protein BMSF_0033 [Vibrio sp. 09022] gi|161761499|gb|ABX77143.1| conserved hypothetical protein [Vibrio sp. 09022] Length = 297 Score = 35.9 bits (82), Expect = 2.8, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 53/164 (32%), Gaps = 32/164 (19%) Query: 9 ALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLD 68 A+ +DG N ++ Y+ +L+ + + + Y + D Sbjct: 8 AVLVDGEN----AQPSK----YQDILREVSQKGNIASKWVYA------DWTNPTHKSWKD 53 Query: 69 WLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGCF 125 + G + ++F K + D L +DA E S+ + + I S DG F Sbjct: 54 IMLETG----SAPKQQF------HYCKDAADHALIMDAIELICTSDKINAICIVSSDGGF 103 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 L + K V V R+ F+ + + Sbjct: 104 AGLAQRISEKGLHVMAVG-----KKDTPAAFRKACHNFVYVENI 142 >gi|302801828|ref|XP_002982670.1| hypothetical protein SELMODRAFT_58009 [Selaginella moellendorffii] gi|300149769|gb|EFJ16423.1| hypothetical protein SELMODRAFT_58009 [Selaginella moellendorffii] Length = 153 Score = 35.9 bits (82), Expect = 2.8, Method: Composition-based stats. Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 3/45 (6%) Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160 +V+ SGD F+ L+ LQ K V +V + S+ L A Sbjct: 103 VVLISGDQDFSPLLHRLQMKRFNVLLV---RPEGVHVSESLLNSA 144 >gi|224074705|ref|XP_002304433.1| predicted protein [Populus trichocarpa] gi|222841865|gb|EEE79412.1| predicted protein [Populus trichocarpa] Length = 300 Score = 35.9 bits (82), Expect = 2.8, Method: Composition-based stats. Identities = 23/97 (23%), Positives = 33/97 (34%), Gaps = 15/97 (15%) Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 L D L GF V + K +K M VD + E V+ S D Sbjct: 113 GLADELKRAGFWVRTVLDKP---QAADVALKDHM-----VDMMD-KRRAECFVLVSDDSD 163 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161 F ++ + + K +V V L+R AD Sbjct: 164 FVHVLKEAKSRCLKTVVVGDVN------DGALKRVAD 194 >gi|190572401|ref|YP_001970246.1| hypothetical protein Smlt0329 [Stenotrophomonas maltophilia K279a] gi|190010323|emb|CAQ43931.1| conserved hypothetical protein [Stenotrophomonas maltophilia K279a] Length = 253 Score = 35.9 bits (82), Expect = 2.8, Method: Composition-based stats. Identities = 6/54 (11%), Positives = 20/54 (37%), Gaps = 2/54 (3%) Query: 86 TENCGRKRVKSSMDVELAVDA--FEQSEGLEHLVIFSGDGCFTTLVAALQRKVK 137 ++ + +D+ + +D + +++ +GD F +R+ Sbjct: 135 PDDLYPNVRQKGVDMRIGIDISSLALKRQVRQIILMAGDADFVPAAKLARREGV 188 >gi|21360744|gb|AAM49686.1| phoshoribosylaminoimiazolcarboxylase ATPase subunit [Enterococcus faecium] Length = 164 Score = 35.9 bits (82), Expect = 2.8, Method: Composition-based stats. Identities = 24/146 (16%), Positives = 49/146 (33%), Gaps = 28/146 (19%) Query: 31 RKLLKA-FRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENC 89 +LL+ F ++ A Y T V + D + G+ V K + + Sbjct: 27 DRLLEKSFLETNNIVIAPYATIVSPTD---------IQDAIDGIGYPCVLKTTRGGYDGK 77 Query: 90 GRKRVKSSMDVELAVDAFEQSEGLEHLVI-----------FSGDGCFT--TLVAALQRKV 136 G+ ++S D+ A+D + + I +G G FT +V + Sbjct: 78 GQYVLESRADLAPAMDLLREGTCVLEAWIPFEKEISIMVAGNGQGDFTTFPVVENIHHNN 137 Query: 137 KKVTIVSTVLSDPSMASDQLRRQADY 162 ++ P+ + +A+ Sbjct: 138 ILHETIA-----PAAIDQDVIEEAER 158 >gi|117928955|ref|YP_873506.1| hypothetical protein Acel_1748 [Acidothermus cellulolyticus 11B] gi|117649418|gb|ABK53520.1| hypothetical protein Acel_1748 [Acidothermus cellulolyticus 11B] Length = 284 Score = 35.5 bits (81), Expect = 2.9, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 38/93 (40%), Gaps = 16/93 (17%) Query: 100 VELAV--DAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQ 155 VELA+ + S ++ +V+ +G+ + +++ K++ + P SD Sbjct: 90 VELAIYREMLALSRNPEIDTIVLVAGNAELAIPIGDVRQLGKRIIVA-----QPGWDSDD 144 Query: 156 -----LRRQADYFMDLAY--LKNEIARDPDEDK 181 +R AD + L + L + I E + Sbjct: 145 EDVAAVRDAADETVVLPWPLLADAIELPAAELR 177 >gi|242763909|ref|XP_002340668.1| dynein heavy chain [Talaromyces stipitatus ATCC 10500] gi|218723864|gb|EED23281.1| dynein heavy chain [Talaromyces stipitatus ATCC 10500] Length = 4347 Score = 35.5 bits (81), Expect = 2.9, Method: Composition-based stats. Identities = 17/81 (20%), Positives = 31/81 (38%), Gaps = 12/81 (14%) Query: 55 DPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAV--DAFEQSEG 112 D EQ +WL N V + +EF + + + +DV L + D E + Sbjct: 2867 DEEQALKGPILFSNWLSKNYVPVEQEQLREFVKARLKTFCEEEVDVPLVLFNDVLEHALR 2926 Query: 113 LEHL--------VI--FSGDG 123 ++ + ++ SG G Sbjct: 2927 IDRVFRQPQGHLILIGVSGSG 2947 >gi|254374267|ref|ZP_04989749.1| conserved hypothetical protein [Francisella novicida GA99-3548] gi|151571987|gb|EDN37641.1| conserved hypothetical protein [Francisella novicida GA99-3548] gi|328676942|gb|AEB27812.1| NG,NG-dimethylarginine dimethylaminohydrolase 1 [Francisella cf. novicida Fx1] Length = 260 Score = 35.5 bits (81), Expect = 2.9, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 28/73 (38%), Gaps = 11/73 (15%) Query: 15 ANLYASSKALGFDIDYRKLLKA--------FRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 NLY + + LG I+ L++ F + A V+R + P ++ Sbjct: 38 QNLYDTYQKLGIKIN---LIEQGDNVPDMVFTANAGVVRENTFIASNFRPAERKPEEVLF 94 Query: 67 LDWLHYNGFQVVA 79 W NG+Q+ Sbjct: 95 QQWFKDNGYQLKT 107 >gi|311742102|ref|ZP_07715912.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272] gi|311314595|gb|EFQ84502.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272] Length = 192 Score = 35.5 bits (81), Expect = 3.0, Method: Composition-based stats. Identities = 28/147 (19%), Positives = 51/147 (34%), Gaps = 29/147 (19%) Query: 10 LFIDGANLYASSKALGFDI-----------DYRKLLKAFRSR-AIVIRAYYYTTVVGDPE 57 L +DG N+ A+ LG I + +LL+ ++ ++ V Sbjct: 14 LLVDGENIDAT---LGQSILGRRPHPTERPRWDRLLRFAEEHWDQQVKGLFFLAVTAGEL 70 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLV 117 + L GF+ V G K +DV + E + +V Sbjct: 71 PM-----GFVQALTAIGFRPV--------PLAGAPEQKV-VDVAIQRTLEEIARREADVV 116 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVST 144 + S DG F + AL + ++V ++ Sbjct: 117 LASNDGDFLPQIEALVQGSRRVAMLGF 143 >gi|288947791|ref|YP_003445174.1| hypothetical protein Alvin_3251 [Allochromatium vinosum DSM 180] gi|288898307|gb|ADC64142.1| hypothetical protein Alvin_3251 [Allochromatium vinosum DSM 180] Length = 328 Score = 35.5 bits (81), Expect = 3.0, Method: Composition-based stats. Identities = 27/156 (17%), Positives = 51/156 (32%), Gaps = 21/156 (13%) Query: 2 FDPREKIALFIDGANLY-ASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 P +AL+IDG N Y A ++ LL + R + + Sbjct: 69 LQPPRSVALYIDGDNQYPAIARD---------LLASVRQDLGLDVSRVVLAG----NDHG 115 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDV--ELAVDAFEQSEGLEHLVI 118 + L G + RK + + V EL + +G + +V+ Sbjct: 116 HTVPRWQAALAKEG----LAEDRILALRVPRKPEAADLAVILELGANMERHRQGPDLVVV 171 Query: 119 FSGDGCFTTLVAALQRKVKKVTIV-STVLSDPSMAS 153 S D A++ + +V + + + P+ S Sbjct: 172 VSRDEWLIGAAEAVRARGCRVWVAYAENDAVPAQTS 207 >gi|217034222|ref|ZP_03439640.1| hypothetical protein HP9810_2g1 [Helicobacter pylori 98-10] gi|216943282|gb|EEC22744.1| hypothetical protein HP9810_2g1 [Helicobacter pylori 98-10] Length = 166 Score = 35.5 bits (81), Expect = 3.0, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 32/66 (48%), Gaps = 3/66 (4%) Query: 98 MDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQ 155 +D+ LA D + ++ +++FS D F ++ A K +V ++ + P++ Sbjct: 58 IDMLLAHDITKLYCTKQGGCILLFSKDTDFMPVLEAAWEKEFEV-FIANIQEGPNLVPPD 116 Query: 156 LRRQAD 161 LR+ D Sbjct: 117 LRKSCD 122 >gi|88799413|ref|ZP_01114991.1| hypothetical protein MED297_17443 [Reinekea sp. MED297] gi|88777952|gb|EAR09149.1| hypothetical protein MED297_17443 [Reinekea sp. MED297] Length = 252 Score = 35.5 bits (81), Expect = 3.0, Method: Composition-based stats. Identities = 31/180 (17%), Positives = 58/180 (32%), Gaps = 35/180 (19%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 +IAL ID N+ + + A Y Q + H Sbjct: 6 RIALLIDCDNVSH----------------RAVEGVLAVLARY---------GQVNVRHAF 40 Query: 67 LDWLHYN--GFQVVAKV-AKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSG 121 DW + G+ + A + R K++ D + +DA + S ++ + + Sbjct: 41 GDWNSPHIKGWAEKLQPNAIRPMQQFAYTRQKNATDSAMIIDAMDLLYSGNVDAFALMTS 100 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 D FT LV L+ ++ + + F+ + L D D++K Sbjct: 101 DCDFTPLVMRLREAG----LMVFGFGEEKTPA-AFVDSCSQFVYIEKLTEASEVDDDDEK 155 >gi|290968037|ref|ZP_06559586.1| conserved hypothetical protein [Megasphaera genomosp. type_1 str. 28L] gi|290781943|gb|EFD94522.1| conserved hypothetical protein [Megasphaera genomosp. type_1 str. 28L] Length = 278 Score = 35.5 bits (81), Expect = 3.0, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 53/165 (32%), Gaps = 29/165 (17%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 K+A+ ID N+ SSK + +L + VI Y Q S + Sbjct: 6 KLAVVIDAENI--SSKYI------EVILSEANNLGDVIYKRIY--GNWTTPQMASWRTTI 55 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGC 124 LD A + + K+S D L +D + L+ I S D Sbjct: 56 LDN------------AIQPVQQYSNTIRKNSSDSALIIDTMDLLYQSNLDGFCIVSSDSD 103 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 FT L + L+ + + S + F+ L L Sbjct: 104 FTRLASRLRE-----SQKYVLGMGESKTPRSFISACNKFLYLDIL 143 >gi|145223277|ref|YP_001133955.1| beta-ketoacyl synthase [Mycobacterium gilvum PYR-GCK] gi|145215763|gb|ABP45167.1| beta-ketoacyl synthase [Mycobacterium gilvum PYR-GCK] Length = 1698 Score = 35.5 bits (81), Expect = 3.0, Method: Composition-based stats. Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 1/38 (2%) Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLR 157 SGD V AL+ + V I + + P A DQLR Sbjct: 1389 SGDNDAVRAVTALEERGVTVHIAAVDIGAPG-ADDQLR 1425 >gi|295101795|emb|CBK99340.1| glutamate synthase (NADH) small subunit [Faecalibacterium prausnitzii L2-6] Length = 492 Score = 35.5 bits (81), Expect = 3.1, Method: Composition-based stats. Identities = 10/28 (35%), Positives = 16/28 (57%) Query: 94 VKSSMDVELAVDAFEQSEGLEHLVIFSG 121 +++MDV AVDA E + +V+ G Sbjct: 220 FRTNMDVGGAVDAAEILNRYDAIVLCCG 247 >gi|315605855|ref|ZP_07880887.1| conserved hypothetical protein [Actinomyces sp. oral taxon 180 str. F0310] gi|315312553|gb|EFU60638.1| conserved hypothetical protein [Actinomyces sp. oral taxon 180 str. F0310] Length = 190 Score = 35.5 bits (81), Expect = 3.1, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 32/82 (39%), Gaps = 12/82 (14%) Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVEL--AVDAFEQSEGLEHLVIFSGD 122 + L + V+ +V +DV L +DA Q + + +++ S D Sbjct: 70 GFVQALTAMDYSVI------PLSGPADMKV---VDVGLQRTMDAIAQLDSGD-VILASHD 119 Query: 123 GCFTTLVAALQRKVKKVTIVST 144 F + AL + ++V I+ Sbjct: 120 ADFLPQIDALLDQGRRVAIMCF 141 >gi|225619659|ref|YP_002720916.1| hypothetical protein BHWA1_00718 [Brachyspira hyodysenteriae WA1] gi|225214478|gb|ACN83212.1| hypothetical protein BHWA1_00718 [Brachyspira hyodysenteriae WA1] Length = 364 Score = 35.5 bits (81), Expect = 3.1, Method: Composition-based stats. Identities = 28/162 (17%), Positives = 62/162 (38%), Gaps = 36/162 (22%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 ++I ++ID N+ L +++++ ++ S +Y + D E +S Sbjct: 1 MKRIGIYIDLENVSH----LSYEVNFEQMFNNIFS--------FYKNNLKDKEIVYSIKK 48 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRK-----------RVKSSMDVELAVDAFE---QS 110 D K K++++N + K+ D+ ++DAFE + Sbjct: 49 AYGDA----------KSIKKYSKNLRDMHIDIVYSVPVNKAKNMADMISSIDAFEDFVIN 98 Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMA 152 + ++ + S D +T ++ L R V IV+ + Sbjct: 99 KKIDIAIFVSRDVDYTVVMDRLSRYGAIVGIVTVFDNSKRNI 140 >gi|301312472|ref|ZP_07218386.1| conserved hypothetical protein [Bacteroides sp. 20_3] gi|300829538|gb|EFK60194.1| conserved hypothetical protein [Bacteroides sp. 20_3] Length = 234 Score = 35.5 bits (81), Expect = 3.2, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 24/68 (35%), Gaps = 7/68 (10%) Query: 99 DVELAVDAFEQSE--GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156 D+ L +DA + + + + DG ++ L ++ KV + L Sbjct: 80 DIALVIDAMDILRDGRADCFCLVASDGDYSLLAQRIREAGLKV-----LGYGEGKTPVSL 134 Query: 157 RRQADYFM 164 R F+ Sbjct: 135 VRSCSVFL 142 >gi|315443737|ref|YP_004076616.1| polyketide synthase family protein [Mycobacterium sp. Spyr1] gi|315262040|gb|ADT98781.1| polyketide synthase family protein [Mycobacterium sp. Spyr1] Length = 1735 Score = 35.5 bits (81), Expect = 3.2, Method: Composition-based stats. Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 1/38 (2%) Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLR 157 SGD V AL+ + V I + + P A DQLR Sbjct: 1426 SGDNDAVRAVTALEERGVTVHIAAVDIGAPG-ADDQLR 1462 >gi|239618081|ref|YP_002941403.1| cysteinyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1] gi|239506912|gb|ACR80399.1| cysteinyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1] Length = 458 Score = 35.5 bits (81), Expect = 3.2, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 5/65 (7%) Query: 49 YTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE 108 Y V + +L Y G++V+ +A+ FT+ + +K++ E VDA E Sbjct: 33 YNFVHLGNSRPAITFDAFRRYLEYRGYRVI--LAQNFTDIDDKIIIKAN---EEGVDALE 87 Query: 109 QSEGL 113 +E Sbjct: 88 IAERY 92 >gi|254479226|ref|ZP_05092571.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Carboxydibrachium pacificum DSM 12653] gi|214034827|gb|EEB75556.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Carboxydibrachium pacificum DSM 12653] Length = 471 Score = 35.5 bits (81), Expect = 3.2, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 72/183 (39%), Gaps = 33/183 (18%) Query: 14 GANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYN 73 G N+ + K LG DI++ KLL + R + T+ D + LD + + Sbjct: 229 GQNVNSYGKDLGGDINFAKLLYMLNDIKGIERIRFMTSHPKDISDELIYAMRDLDKVCEH 288 Query: 74 GF--------QVVAKVAKEFTENCGRK---RVKSSM-DVELAVDAFEQSEGLEHLVIFSG 121 +++ ++ + +T + +V++++ D+ + D +V F G Sbjct: 289 LHLPVQAGSNKILKRMNRRYTREHYLEIIDKVRANIPDIAITTDI---------IVGFPG 339 Query: 122 DG--CFTT---LVAALQRKVKKVTIVSTVLSDPSM-----ASDQLRRQADYFMDLAYLKN 171 + F LV ++ + S P+ D++++ D + L L+N Sbjct: 340 ETEEDFLQTLDLVERVRFDGAYTFMYSKRAGTPAASMPDQVDDEVKK--DRLIRLIELQN 397 Query: 172 EIA 174 +I+ Sbjct: 398 KIS 400 >gi|302407415|ref|XP_003001543.1| cation-transporting ATPase [Verticillium albo-atrum VaMs.102] gi|261360050|gb|EEY22478.1| cation-transporting ATPase [Verticillium albo-atrum VaMs.102] Length = 1320 Score = 35.5 bits (81), Expect = 3.3, Method: Composition-based stats. Identities = 22/99 (22%), Positives = 36/99 (36%), Gaps = 21/99 (21%) Query: 29 DYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLD-----WLHYNGFQVVAKVAK 83 DY + K F R + A Y + + E ++ L L + GF V++ K Sbjct: 660 DYEETYKYFTRRGSRVLALAYKQLSTEGELSSGKINDLKREQVECGLTFAGFLVLSCPLK 719 Query: 84 EFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122 E D + AV +S +V+ +GD Sbjct: 720 E--------------DAKEAVQMLNESSH--RVVMITGD 742 >gi|302339827|ref|YP_003805033.1| hypothetical protein Spirs_3345 [Spirochaeta smaragdinae DSM 11293] gi|301637012|gb|ADK82439.1| hypothetical protein Spirs_3345 [Spirochaeta smaragdinae DSM 11293] Length = 332 Score = 35.5 bits (81), Expect = 3.3, Method: Composition-based stats. Identities = 24/137 (17%), Positives = 45/137 (32%), Gaps = 17/137 (12%) Query: 33 LLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRK 92 LL S + A Y + + + LH F+++ ++ + Sbjct: 27 LLDYVHSYGRISIARVYGDFAKNRFARAAA------ELHRESFEMI-----HIPDSAKEE 75 Query: 93 RVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMA 152 + ++ L++ SG F L+ L+ + + + V D A Sbjct: 76 Y--PDTITGGVIALLALHPHIDQLLLISGRKSFAPLLRQLRT----LDLETMVFCDARKA 129 Query: 153 SDQLRRQADYFMDLAYL 169 +QL AD F D L Sbjct: 130 DEQLLLLADDFGDFRDL 146 >gi|20807803|ref|NP_622974.1| 2-methylthioadenine synthetase [Thermoanaerobacter tengcongensis MB4] gi|81481577|sp|Q8RA72|MIAB_THETN RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase gi|20516361|gb|AAM24578.1| 2-methylthioadenine synthetase [Thermoanaerobacter tengcongensis MB4] Length = 471 Score = 35.5 bits (81), Expect = 3.3, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 72/183 (39%), Gaps = 33/183 (18%) Query: 14 GANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYN 73 G N+ + K LG DI++ KLL + R + T+ D + LD + + Sbjct: 229 GQNVNSYGKDLGGDINFAKLLYMLNDIKGIERIRFMTSHPKDISDELIYAMRDLDKVCEH 288 Query: 74 GF--------QVVAKVAKEFTENCGRK---RVKSSM-DVELAVDAFEQSEGLEHLVIFSG 121 +++ ++ + +T + +V++++ D+ + D +V F G Sbjct: 289 LHLPVQAGSNKILKRMNRRYTREHYLEIIDKVRANIPDIAITTDI---------IVGFPG 339 Query: 122 DG--CF---TTLVAALQRKVKKVTIVSTVLSDPSM-----ASDQLRRQADYFMDLAYLKN 171 + F LV ++ + S P+ D++++ D + L L+N Sbjct: 340 ETEEDFFQTLDLVERVRFDGAYTFMYSKRAGTPAASMPDQVDDEVKK--DRLIRLIELQN 397 Query: 172 EIA 174 +I+ Sbjct: 398 KIS 400 >gi|46445921|ref|YP_007286.1| putative cadmium-transporting ATPase [Candidatus Protochlamydia amoebophila UWE25] gi|46399562|emb|CAF23011.1| putative cadmium-transporting ATPase [Candidatus Protochlamydia amoebophila UWE25] Length = 641 Score = 35.5 bits (81), Expect = 3.3, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 3/50 (6%) Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMA--SDQLRRQADYFM-DLAYLK 170 F L+ A Q+K K V VST + D++R + F+ DL L+ Sbjct: 427 DFIDLIDAYQKKGKTVVAVSTHKKVEGIIVLEDEIRSDSAQFIADLKQLQ 476 >gi|298735852|ref|YP_003728377.1| hypothetical protein HPB8_356 [Helicobacter pylori B8] gi|298355041|emb|CBI65913.1| hypothetical protein HPB8_356 [Helicobacter pylori B8] Length = 148 Score = 35.5 bits (81), Expect = 3.4, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 45/104 (43%), Gaps = 10/104 (9%) Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHL 116 +F ++ D YNG + AK+ + K + +D LA D + ++ + Sbjct: 9 KFKFVYKFEDKEVYNGLE--AKIFIPYL-----KLRQKQIDALLAHDITKLYCTKQGGCI 61 Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160 ++FS D F ++ A K +V ++ + P++ L++ Sbjct: 62 LLFSKDTDFVPVLEAAWEKGFEV-FIANIQEGPNLVPPDLKKSC 104 >gi|170093986|ref|XP_001878214.1| predicted protein [Laccaria bicolor S238N-H82] gi|164646668|gb|EDR10913.1| predicted protein [Laccaria bicolor S238N-H82] Length = 620 Score = 35.5 bits (81), Expect = 3.4, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 28/69 (40%), Gaps = 1/69 (1%) Query: 86 TENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTV 145 G+ M V+L + A + +I + D F +A L+ + +V ++S Sbjct: 76 PSAGGKNIATKMMMVDLIIHALDH-PAPTTFLIITADRDFGYAIATLRLRKYRVVLLSPP 134 Query: 146 LSDPSMASD 154 + P + S Sbjct: 135 GTHPDVTSQ 143 >gi|317009114|gb|ADU79694.1| hypothetical protein HPIN_02220 [Helicobacter pylori India7] Length = 243 Score = 35.5 bits (81), Expect = 3.5, Method: Composition-based stats. Identities = 16/96 (16%), Positives = 38/96 (39%), Gaps = 6/96 (6%) Query: 78 VAKVAKEFTENCGRKRV---KSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAAL 132 K+ E G R + +D+ + +D + + ++IFS D + Sbjct: 127 RTKLHAIRVEFDGSYRALLEQKQVDMLMGLDIQRIAFKKIADRILIFSKDTDLIPALKLA 186 Query: 133 QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 + + +V ++ + + S+ S L+ +D L+ Sbjct: 187 RDEGLRVD-IADLSNRLSLLSQDLKYNSDKVRKLSS 221 >gi|313159666|gb|EFR59024.1| conserved hypothetical protein [Alistipes sp. HGB5] Length = 320 Score = 35.5 bits (81), Expect = 3.6, Method: Composition-based stats. Identities = 26/166 (15%), Positives = 52/166 (31%), Gaps = 29/166 (17%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M +K A+ ID N+ I + +L + Y + +F Sbjct: 1 MELSDKKFAVLIDADNISH------RKI--KDILDEIANYGTPTIKRIY---GDFTDPKF 49 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118 + +L N +++ G+ D L +DA + E + I Sbjct: 50 AAWKSILLE---NSIT----PIQQYAYTTGKNAT----DSALIIDAMDILHKESVNGFCI 98 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 S D +T L + ++ ++V + + D F+ Sbjct: 99 VSSDSDYTRLASRIRESGREVLGFGEKKTPKPF-----IKSCDKFI 139 >gi|229819338|ref|YP_002880864.1| hypothetical protein Bcav_0841 [Beutenbergia cavernae DSM 12333] gi|229565251|gb|ACQ79102.1| conserved hypothetical protein [Beutenbergia cavernae DSM 12333] Length = 197 Score = 35.5 bits (81), Expect = 3.6, Method: Composition-based stats. Identities = 24/145 (16%), Positives = 46/145 (31%), Gaps = 19/145 (13%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYY-------YTTVVGDPEQQ 59 + + +DG N+ A+ LG + + R R I A+ T + Sbjct: 16 RTYVLVDGENIDAT---LGMSVLGHRPAPEERPRWDRITAFAETLWDQPVTALFFLNASN 72 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIF 119 + L G+ + G K V D+ + ++ +++ Sbjct: 73 GQMPMSFVQALLALGYHPI-----PLAGGPGEKVV----DIGIQRTLAALTDRPSDVLLA 123 Query: 120 SGDGCFTTLVAALQRKVKKVTIVST 144 S DG F V L +V ++ Sbjct: 124 SHDGDFLPQVEDLLTPDHRVGLLCF 148 >gi|326431491|gb|EGD77061.1| TKL protein kinase [Salpingoeca sp. ATCC 50818] Length = 1286 Score = 35.5 bits (81), Expect = 3.7, Method: Composition-based stats. Identities = 29/155 (18%), Positives = 59/155 (38%), Gaps = 24/155 (15%) Query: 30 YRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENC 89 YR+ ++ RS+ + +A ++ + E + L + + ++ ++ + Sbjct: 903 YRRRVRHLRSQRDLGQA-----LLDEREAEVIALRS-VWQIKFD----QVRLIRRLASGA 952 Query: 90 GRKRVKSSMD-VELAVDAFEQSEGLEHLVIFSGDG---CFTTLVAALQR-KVKKVTIVST 144 K+ D + +AV +Q ++ F DG F V LQR + + V Sbjct: 953 YGVVFKAEWDSIIVAVKVLKQ-PSVD----FFDDGMEAEFEKEVEFLQRTRHQHVVRFFG 1007 Query: 145 VLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 P + F+ L LK+ + RD +E Sbjct: 1008 AGQTPENTPFMVL----EFVPLGSLKDLLKRDFEE 1038 >gi|317178375|dbj|BAJ56163.1| hypothetical protein HPF30_0066 [Helicobacter pylori F30] Length = 230 Score = 35.5 bits (81), Expect = 3.7, Method: Composition-based stats. Identities = 7/52 (13%), Positives = 23/52 (44%), Gaps = 2/52 (3%) Query: 87 ENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKV 136 ++ + +D+++ +D + + ++ +V+ SGD F + + Sbjct: 144 DDFIYHAKQKGVDIKIGLDIATLALKKLVQKIVLISGDSDFVPAAKLARVEG 195 >gi|270261265|ref|ZP_06189538.1| isochorismatase hydrolase [Serratia odorifera 4Rx13] gi|270044749|gb|EFA17840.1| isochorismatase hydrolase [Serratia odorifera 4Rx13] Length = 248 Score = 35.1 bits (80), Expect = 3.8, Method: Composition-based stats. Identities = 23/114 (20%), Positives = 41/114 (35%), Gaps = 19/114 (16%) Query: 2 FDPREKIALFIDGANLYASSKAL----GFDI--------DYRKLLKAFRSRAIVIRAYYY 49 F P+E + +D N YAS GFD+ + ++ + A R+ I + + Sbjct: 32 FAPQETALIVVDMQNAYASQGGYLDLAGFDVSATAPVIANIKRAISAARAAGIRVIFF-- 89 Query: 50 TTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELA 103 D + + +W N K ++ E G+ K D +L Sbjct: 90 -QNGWDNQYVEAGGQGSPNWHKSN----ALKTMRKRPELMGKLLAKGDWDYDLV 138 >gi|227505008|ref|ZP_03935057.1| conserved hypothetical protein [Corynebacterium striatum ATCC 6940] gi|227198372|gb|EEI78420.1| conserved hypothetical protein [Corynebacterium striatum ATCC 6940] Length = 92 Score = 35.1 bits (80), Expect = 3.9, Method: Composition-based stats. Identities = 7/39 (17%), Positives = 16/39 (41%), Gaps = 2/39 (5%) Query: 100 VELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136 + + +D +E + +++ SGD F +R Sbjct: 1 MRIGLDIASLAERGLVNQIIMISGDSDFVPAAKHARRSG 39 >gi|196047975|ref|ZP_03115153.1| C-5 cytosine-specific DNA methylase [Bacillus cereus 03BB108] gi|196021231|gb|EDX59960.1| C-5 cytosine-specific DNA methylase [Bacillus cereus 03BB108] Length = 471 Score = 35.1 bits (80), Expect = 3.9, Method: Composition-based stats. Identities = 7/31 (22%), Positives = 15/31 (48%) Query: 53 VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAK 83 DP+++ ++ L NG++V K + Sbjct: 137 RPDPDKKGKTFKSFINALKRNGYKVDWKELR 167 >gi|311746258|ref|ZP_07720043.1| sigma-54 dependent DNA-binding response regulator [Algoriphagus sp. PR1] gi|126576491|gb|EAZ80769.1| sigma-54 dependent DNA-binding response regulator [Algoriphagus sp. PR1] Length = 467 Score = 35.1 bits (80), Expect = 3.9, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 28/61 (45%), Gaps = 3/61 (4%) Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125 LD + ++V ++ + E R+ K + E+ +D + ++L+ SGDG F Sbjct: 244 FLDEIGNLSYEVQIQLLRAIQE---RRIRKIGGNKEIQIDVRIIAATNDNLIANSGDGQF 300 Query: 126 T 126 Sbjct: 301 R 301 >gi|145631705|ref|ZP_01787467.1| hypothetical protein CGSHi22421_00912 [Haemophilus influenzae R3021] gi|144982648|gb|EDJ90190.1| hypothetical protein CGSHi22421_00912 [Haemophilus influenzae R3021] Length = 106 Score = 35.1 bits (80), Expect = 4.0, Method: Composition-based stats. Identities = 7/40 (17%), Positives = 16/40 (40%), Gaps = 4/40 (10%) Query: 98 MDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVK 137 MD+ + + ++ +V+ +GD F + K Sbjct: 1 MDITI----LSYEKLVDVIVLIAGDSDFVPAAKQARIKGV 36 >gi|315608482|ref|ZP_07883469.1| conserved hypothetical protein [Prevotella buccae ATCC 33574] gi|315249808|gb|EFU29810.1| conserved hypothetical protein [Prevotella buccae ATCC 33574] Length = 239 Score = 35.1 bits (80), Expect = 4.2, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 56/162 (34%), Gaps = 39/162 (24%) Query: 9 ALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYT-----TVVGDPEQQFSPL 63 A+ IDG N+ ++ LG DI + S I Y + E+ + Sbjct: 15 AILIDGDNV--AADKLG-DI-----ISFVSSYGNPIIRRIYADWTKSAMKRWKEEAKTFS 66 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVIFSG 121 L++ L Y G +K++ D+ L +DA + ++ I S Sbjct: 67 FRLVEALSYVG-------------------MKNTTDMALVIDAMDLLHGKTVQGFCIVSS 107 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163 D +T L ++ + ++ + + L+ F Sbjct: 108 DSDYTLLAQRIREEG----LLVLGYGEQKTPA-SLQNSCHEF 144 >gi|256824483|ref|YP_003148443.1| dihydrolipoamide dehydrogenase [Kytococcus sedentarius DSM 20547] gi|256687876|gb|ACV05678.1| dihydrolipoamide dehydrogenase [Kytococcus sedentarius DSM 20547] Length = 464 Score = 35.1 bits (80), Expect = 4.2, Method: Composition-based stats. Identities = 8/34 (23%), Positives = 18/34 (52%), Gaps = 1/34 (2%) Query: 109 QSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIV 142 ++ + +V+ +G G + + A Q KKV ++ Sbjct: 1 MADHYDVVVLGAGPGGYVAAIRAAQ-LGKKVAVI 33 >gi|119357877|ref|YP_912521.1| hypothetical protein Cpha266_2085 [Chlorobium phaeobacteroides DSM 266] gi|119355226|gb|ABL66097.1| conserved hypothetical protein [Chlorobium phaeobacteroides DSM 266] Length = 249 Score = 35.1 bits (80), Expect = 4.3, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 37/99 (37%), Gaps = 7/99 (7%) Query: 76 QVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQ 133 +++ + + + + G + K++ D + +DA + + I S D FT L + ++ Sbjct: 55 EILLEHSIQPIQQFGYTKGKNATDSAMIIDAMDLLYTGKFHGFCIVSSDSDFTKLASRIR 114 Query: 134 RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 V + S D F+ L+ + Sbjct: 115 ESGLTVYGFGEKKTPSPFVS-----ACDKFIYTEVLRAK 148 >gi|259047876|ref|ZP_05738277.1| conserved hypothetical protein [Granulicatella adiacens ATCC 49175] gi|259035553|gb|EEW36808.1| conserved hypothetical protein [Granulicatella adiacens ATCC 49175] Length = 224 Score = 35.1 bits (80), Expect = 4.3, Method: Composition-based stats. Identities = 9/53 (16%), Positives = 24/53 (45%), Gaps = 3/53 (5%) Query: 86 TENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKV 136 T+ K +D+ + +D + + + +E +++ +GD F +R+ Sbjct: 138 TDFELNLEQKG-VDMRIGLDIAQLAFKKQVEKIILIAGDSDFVPAAKLARREG 189 >gi|210621068|ref|ZP_03292453.1| hypothetical protein CLOHIR_00396 [Clostridium hiranonis DSM 13275] gi|210155052|gb|EEA86058.1| hypothetical protein CLOHIR_00396 [Clostridium hiranonis DSM 13275] Length = 296 Score = 35.1 bits (80), Expect = 4.4, Method: Composition-based stats. Identities = 20/113 (17%), Positives = 40/113 (35%), Gaps = 19/113 (16%) Query: 47 YYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDA 106 + Y G+ ++ S L ++ NG+ V+ + + K +D Sbjct: 6 FIYNPNSGE-KKLASKLDSIIRIYQRNGYTVI--PYRLDYDIPVSSSFK-DLD------- 54 Query: 107 FEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQ 159 E +H+V GDG +V L+R+ + + PS ++ Sbjct: 55 ----ESYDHVVFCGGDGTIDLMVNELKRRNINLPV----GIIPSGTANDFANA 99 >gi|325854879|ref|ZP_08171631.1| hypothetical protein HMPREF9303_1963 [Prevotella denticola CRIS 18C-A] gi|325484061|gb|EGC86998.1| hypothetical protein HMPREF9303_1963 [Prevotella denticola CRIS 18C-A] Length = 239 Score = 35.1 bits (80), Expect = 4.4, Method: Composition-based stats. Identities = 33/161 (20%), Positives = 55/161 (34%), Gaps = 35/161 (21%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYY-YT--TVVGDPEQQFSPLH 64 IA+ IDG N+ S+ LG D + + IV R Y +T ++ E+ Sbjct: 14 IAVLIDGDNM--SADKLG---DIISFVSIY-GNPIVRRIYADWTKPAMMRWKEEAKVYSF 67 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVIFSGD 122 L++ L Y G + D+ L +DA + ++ I S D Sbjct: 68 RLVEALSYVGVKNTT-------------------DMTLVIDAMDLLHGKTVQGFCIVSSD 108 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163 +T L ++ + V + LR F Sbjct: 109 SDYTLLAQRIREEGLLV-----LGYGEHKTPVALRNSCHDF 144 >gi|294783741|ref|ZP_06749065.1| BchE/P-methylase family protein [Fusobacterium sp. 1_1_41FAA] gi|294480619|gb|EFG28396.1| BchE/P-methylase family protein [Fusobacterium sp. 1_1_41FAA] Length = 434 Score = 35.1 bits (80), Expect = 4.4, Method: Composition-based stats. Identities = 11/51 (21%), Positives = 22/51 (43%) Query: 16 NLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 N+ +K +D DY +++ F+ I++ A Y D + F + Sbjct: 271 NIKKMNKKSNYDFDYENIIRIFKKHRILVHASYVIGYDYDTKDYFQEILDF 321 >gi|156094856|ref|XP_001613464.1| PST-A protein [Plasmodium vivax SaI-1] gi|148802338|gb|EDL43737.1| PST-A protein [Plasmodium vivax] Length = 359 Score = 35.1 bits (80), Expect = 4.4, Method: Composition-based stats. Identities = 11/77 (14%), Positives = 34/77 (44%), Gaps = 4/77 (5%) Query: 51 TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSM---DVELAVDAF 107 ++ D + + + ++ L+ +G+ V + ++ G + +K++M D +L D Sbjct: 77 AILKDADNYYVYKNSWVEQLNKSGYSVYGLDLQGHGQSDGWRNLKTNMKKFD-DLVYDLL 135 Query: 108 EQSEGLEHLVIFSGDGC 124 + + ++ +G Sbjct: 136 QYINRVHDVICLTGRKD 152 >gi|301311616|ref|ZP_07217543.1| conserved hypothetical protein [Bacteroides sp. 20_3] gi|300830702|gb|EFK61345.1| conserved hypothetical protein [Bacteroides sp. 20_3] Length = 234 Score = 35.1 bits (80), Expect = 4.5, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 24/68 (35%), Gaps = 7/68 (10%) Query: 99 DVELAVDAFEQSE--GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156 D+ L +DA + + + + DG ++ L ++ KV + L Sbjct: 80 DIALVIDAMDILRDGQADCFCLVASDGDYSLLAQRIREAGLKV-----LGYGEGKTPVSL 134 Query: 157 RRQADYFM 164 R F+ Sbjct: 135 VRSCSVFL 142 >gi|320353622|ref|YP_004194961.1| hypothetical protein Despr_1516 [Desulfobulbus propionicus DSM 2032] gi|320122124|gb|ADW17670.1| hypothetical protein Despr_1516 [Desulfobulbus propionicus DSM 2032] Length = 356 Score = 35.1 bits (80), Expect = 4.5, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 24/68 (35%), Gaps = 7/68 (10%) Query: 99 DVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156 D + +DA + + + S D FT L + ++ + V + + S Sbjct: 81 DSAMIIDAMDLLYTRRFTGFCLVSSDSDFTRLASRIREEGFPVYGFGERKTPQAFVS--- 137 Query: 157 RRQADYFM 164 D F+ Sbjct: 138 --ACDKFI 143 >gi|332665794|ref|YP_004448582.1| 2,4-dienoyl-CoA reductase (NADPH) [Haliscomenobacter hydrossis DSM 1100] gi|332334608|gb|AEE51709.1| 2,4-dienoyl-CoA reductase (NADPH) [Haliscomenobacter hydrossis DSM 1100] Length = 675 Score = 35.1 bits (80), Expect = 4.6, Method: Composition-based stats. Identities = 7/50 (14%), Positives = 19/50 (38%) Query: 113 LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADY 162 ++ +++ +G L LQ + V ++ + + + QA Sbjct: 621 VDQVIVCAGQEPLRELYEPLQSQGVTVHLIGGADEARELDAKRAIDQASR 670 >gi|289582381|ref|YP_003480847.1| AsnC family transcriptional regulator [Natrialba magadii ATCC 43099] gi|289531934|gb|ADD06285.1| transcriptional regulator, AsnC family [Natrialba magadii ATCC 43099] Length = 137 Score = 35.1 bits (80), Expect = 4.7, Method: Composition-based stats. Identities = 16/97 (16%), Positives = 38/97 (39%), Gaps = 14/97 (14%) Query: 49 YTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDA-- 106 YT + + + ++ + N V+ + FT + VK+ +++ +AVD Sbjct: 20 YTEIADEVGTSEGTVRNRVERMMDN--DVIER----FTISTHTGNVKAMLEISVAVDVDT 73 Query: 107 ------FEQSEGLEHLVIFSGDGCFTTLVAALQRKVK 137 + E ++ + + SG+ +V A + Sbjct: 74 KGISERMAEWEEVDFVWMVSGEQDVVLVVDAADTRGV 110 >gi|313235592|emb|CBY11046.1| unnamed protein product [Oikopleura dioica] Length = 944 Score = 35.1 bits (80), Expect = 4.8, Method: Composition-based stats. Identities = 21/115 (18%), Positives = 42/115 (36%), Gaps = 18/115 (15%) Query: 32 KLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL--DWLHYNGFQVVAKVAKEFTENC 89 K LK S+ + I AY D ++ + + + D + + GF ++ KE T Sbjct: 438 KFLKTLTSQGLRIIAYA----QKDGTEEDAEKNRFVVEDKIKFEGFAILRNDLKEETPGV 493 Query: 90 GRKRVKSSMDVELAV-DAFEQSEGLE----------HLVIFSGD-GCFTTLVAAL 132 + K+ + + D + + ++ S D F LV ++ Sbjct: 494 LKNLQKAGIRTLMVTGDNLNTAVAVAKKCNLFESRLEVIKPSFDKSDFPHLVESI 548 >gi|118497446|ref|YP_898496.1| hypothetical protein FTN_0854 [Francisella tularensis subsp. novicida U112] gi|195536137|ref|ZP_03079144.1| amidinotransferase family protein [Francisella tularensis subsp. novicida FTE] gi|208779240|ref|ZP_03246586.1| amidinotransferase family protein [Francisella novicida FTG] gi|254372807|ref|ZP_04988296.1| conserved hypothetical protein [Francisella tularensis subsp. novicida GA99-3549] gi|118423352|gb|ABK89742.1| conserved protein of unknown function [Francisella novicida U112] gi|151570534|gb|EDN36188.1| conserved hypothetical protein [Francisella novicida GA99-3549] gi|194372614|gb|EDX27325.1| amidinotransferase family protein [Francisella tularensis subsp. novicida FTE] gi|208745040|gb|EDZ91338.1| amidinotransferase family protein [Francisella novicida FTG] Length = 260 Score = 35.1 bits (80), Expect = 4.8, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 28/73 (38%), Gaps = 11/73 (15%) Query: 15 ANLYASSKALGFDIDYRKLLKA--------FRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 NLY + + LG I+ L++ F + A V+R + P ++ Sbjct: 38 QNLYDTYQKLGVKIN---LIEQGENVPDMVFTANAGVVRENTFIASNFRPAERKPEEVLF 94 Query: 67 LDWLHYNGFQVVA 79 W NG+Q+ Sbjct: 95 QQWFKDNGYQLKT 107 >gi|237739286|ref|ZP_04569767.1| radical SAM domain-containing protein [Fusobacterium sp. 2_1_31] gi|229422894|gb|EEO37941.1| radical SAM domain-containing protein [Fusobacterium sp. 2_1_31] Length = 434 Score = 35.1 bits (80), Expect = 4.8, Method: Composition-based stats. Identities = 11/51 (21%), Positives = 22/51 (43%) Query: 16 NLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 N+ +K +D DY +++ F+ I++ A Y D + F + Sbjct: 271 NIKKMNKKSNYDFDYENIIRIFKKHRILVHASYVIGYDYDTKDYFQEILDF 321 >gi|94312282|ref|YP_585492.1| hypothetical protein Rmet_3351 [Cupriavidus metallidurans CH34] gi|93356134|gb|ABF10223.1| conserved hypothetical protein [Cupriavidus metallidurans CH34] Length = 253 Score = 35.1 bits (80), Expect = 4.8, Method: Composition-based stats. Identities = 26/143 (18%), Positives = 50/143 (34%), Gaps = 34/143 (23%) Query: 8 IALFIDGANLYASSKALGFDIDYRK-------LLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 IA+++D N+ ID+ LL I + Y Q Sbjct: 21 IAVYVDMENV--------ASIDFALEDLMSALLLAEDDHNCIFVIKAAY-------GSQG 65 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS----EGLEHL 116 + L + L + F ++ + K+ D+ +++DAFE ++ Sbjct: 66 NAKKALKEQLIDHNFTLI--------DTPKIGVEKNRADLCISLDAFETLYLGNPRIDRY 117 Query: 117 VIFSGDGCFTTLVAALQRKVKKV 139 + D FT + L++ K+V Sbjct: 118 CFLTSDSDFTVIGDRLRKYGKEV 140 >gi|282853058|ref|ZP_06262395.1| conserved hypothetical protein [Propionibacterium acnes J139] gi|282582511|gb|EFB87891.1| conserved hypothetical protein [Propionibacterium acnes J139] Length = 106 Score = 34.7 bits (79), Expect = 5.0, Method: Composition-based stats. Identities = 15/94 (15%), Positives = 30/94 (31%), Gaps = 5/94 (5%) Query: 53 VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG 112 +P++ L +W V + K + N + +D+ A F+ + Sbjct: 9 KHNPDEYCRNLAQRSEWTRDRRVTVTYRPLKYY--NPTEPPREKGVDILAAFRIFQAAAY 66 Query: 113 --LEHLVIFSGDGCFTTLVAALQRKV-KKVTIVS 143 + L++ S D V A + V Sbjct: 67 READVLILASHDTDLEPAVEAAMKLGTCHVETAG 100 >gi|332669784|ref|YP_004452792.1| hypothetical protein Celf_1270 [Cellulomonas fimi ATCC 484] gi|332338822|gb|AEE45405.1| hypothetical protein Celf_1270 [Cellulomonas fimi ATCC 484] Length = 191 Score = 34.7 bits (79), Expect = 5.1, Method: Composition-based stats. Identities = 25/148 (16%), Positives = 49/148 (33%), Gaps = 30/148 (20%) Query: 10 LFIDGANLYASSKALGFDI-----------DYRKLLKAFRSR-AIVIRAYYYTTVVGDPE 57 L +DG N+ A+ LG I + ++L + ++A ++ Sbjct: 12 LLVDGENIDAT---LGSSILGGRPTPEQRPRWERVLGFAQQAWGQPVKALFFL-----NA 63 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLV 117 S + L GF + G K +DV + + ++ Sbjct: 64 SNGSLPMSFVQALLAIGFTPI--------PLSGESYEKV-VDVGIKRTLEAIAARGGDVL 114 Query: 118 IFSGDGCFTTLVAALQRKV-KKVTIVST 144 + S DG F V L ++V +++ Sbjct: 115 LASHDGDFAPEVETLVDAGDRRVGLLAF 142 >gi|108804536|ref|YP_644473.1| amidase [Rubrobacter xylanophilus DSM 9941] gi|108765779|gb|ABG04661.1| Amidase [Rubrobacter xylanophilus DSM 9941] Length = 506 Score = 34.7 bits (79), Expect = 5.1, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 34/88 (38%), Gaps = 22/88 (25%) Query: 100 VELAVDAF--EQSEGLEHLVIFS---GD------------GCFTTLVAALQRKVKKVTIV 142 +EL +D + + ++ S G+ G + + + ++ +V Sbjct: 223 IELTLDHVGPIAASVSDVALLLSAIAGEDGLDPRQREVRVGDYQNALER-GVEGVRIGVV 281 Query: 143 STVLSDPSM----ASDQLRRQADYFMDL 166 + S PS+ + +RR AD F +L Sbjct: 282 AEGFSLPSLSEEDVDETVRRAADTFREL 309 >gi|308272493|emb|CBX29097.1| hypothetical protein N47_J00780 [uncultured Desulfobacterium sp.] Length = 251 Score = 34.7 bits (79), Expect = 5.2, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 36/98 (36%), Gaps = 7/98 (7%) Query: 77 VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQR 134 V+ + + + + + K+S D + +DA + + I S D FT L + ++ Sbjct: 54 VLLQYSIQPMQQFAYTKGKNSTDSAMIIDAMDLLYTGNFNGFCIVSSDSDFTKLASRIRE 113 Query: 135 KVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 V + + S D F+ L+ + Sbjct: 114 SGLLVYGFGEQKTPSAFVS-----ACDKFIYTEVLRAK 146 >gi|25809033|gb|AAN74629.1| hypothetical protein [Gram-negative bacterium 0471] Length = 306 Score = 34.7 bits (79), Expect = 5.2, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 53/164 (32%), Gaps = 32/164 (19%) Query: 9 ALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLD 68 A+ +DG N ++ Y+ +L+ + + + Y + D Sbjct: 8 AVLVDGEN----AQPSK----YQDILREVSQKGNIASKWVYA------DWTNPTHKSWKD 53 Query: 69 WLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGCF 125 + G + ++F K + D L +DA E S+ + + I S DG F Sbjct: 54 IMLETG----SAPKQQF------HYCKDAADHALIMDAIELICTSDKINAICIVSSDGGF 103 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 L + K V V R+ F+ + + Sbjct: 104 AGLAQRISEKGLHVMAVG-----KKDTPAAFRKACHNFVYVENI 142 >gi|254779696|ref|YP_003057802.1| hypothetical protein HELPY_1119 [Helicobacter pylori B38] gi|254001608|emb|CAX29697.1| Conserved hypothetical protein [Helicobacter pylori B38] Length = 263 Score = 34.7 bits (79), Expect = 5.3, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 29/65 (44%), Gaps = 3/65 (4%) Query: 98 MDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQ 155 +DV LA D ++ +++FS D F ++ A K +V ++ + P+ Sbjct: 156 VDVLLAHDITRLYCTKQGGCILLFSRDTDFVPVLEAAWEKGFEV-FIANIQESPNSVPSD 214 Query: 156 LRRQA 160 L++ Sbjct: 215 LKKSC 219 >gi|89900334|ref|YP_522805.1| hypothetical protein Rfer_1542 [Rhodoferax ferrireducens T118] gi|89345071|gb|ABD69274.1| conserved hypothetical protein [Rhodoferax ferrireducens T118] Length = 272 Score = 34.7 bits (79), Expect = 5.3, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 21/48 (43%), Gaps = 3/48 (6%) Query: 93 RVKSSMDVELAVDAFEQSEGLEHL---VIFSGDGCFTTLVAALQRKVK 137 K+ D++L +DA E H+ VI GD F + ++ + Sbjct: 99 SAKNGADIKLCLDAVEDISRFGHIGTIVIVGGDSDFMPVSQKIKAAGR 146 >gi|256371062|ref|YP_003108886.1| hypothetical protein Afer_0244 [Acidimicrobium ferrooxidans DSM 10331] gi|256007646|gb|ACU53213.1| conserved hypothetical protein [Acidimicrobium ferrooxidans DSM 10331] Length = 189 Score = 34.7 bits (79), Expect = 5.4, Method: Composition-based stats. Identities = 20/112 (17%), Positives = 36/112 (32%), Gaps = 21/112 (18%) Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 P + + +G+ V G +V +D + E +V+ S D Sbjct: 66 PFIQAIRSHGYTPVLL--------SGPGKV---VDDAIVATLGEIGRRHGSVVLASHDAD 114 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 F + L +V + + QL + DL L ++ RD Sbjct: 115 FAPALEQLLDHGHRVALACFT----EYVAGQLLNR----HDLELL--DLERD 156 >gi|158335518|ref|YP_001516690.1| UDP-glucose 6-dehydrogenase [Acaryochloris marina MBIC11017] gi|158305759|gb|ABW27376.1| UDP-glucose 6-dehydrogenase [Acaryochloris marina MBIC11017] Length = 459 Score = 34.7 bits (79), Expect = 5.5, Method: Composition-based stats. Identities = 21/125 (16%), Positives = 43/125 (34%), Gaps = 21/125 (16%) Query: 13 DGANLYASSKALGFD----------------IDYRKLLKAFR-SRAIVIRAYYYTTVVGD 55 D + L ++ G++ I KL + + + + T Sbjct: 293 DVSALVHTATDYGYEAILLESTIKVNRHQRVIVIEKLQQTLKILKGKTVGLLGLTFKPDT 352 Query: 56 PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEH 115 + + +P L+D L+ G +V K G S++ VE D ++ + Sbjct: 353 DDMRDAPALTLIDELNRLGAKV--KAYDPLLSQSGSSHGLSNVSVE--TDVERLADHCDA 408 Query: 116 LVIFS 120 LV+ + Sbjct: 409 LVLVT 413 >gi|317178073|dbj|BAJ55862.1| hypothetical protein HPF16_1265 [Helicobacter pylori F16] Length = 222 Score = 34.7 bits (79), Expect = 5.5, Method: Composition-based stats. Identities = 7/52 (13%), Positives = 23/52 (44%), Gaps = 2/52 (3%) Query: 87 ENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKV 136 ++ + +D+++ +D + + ++ +V+ SGD F + + Sbjct: 137 DDFIYHAKQKGVDIKIGLDIATLALKKLVQKIVLISGDSDFVPAAKLARVEG 188 >gi|15645498|ref|NP_207673.1| hypothetical protein HP0879 [Helicobacter pylori 26695] gi|2314014|gb|AAD07927.1| predicted coding region HP0879 [Helicobacter pylori 26695] Length = 202 Score = 34.7 bits (79), Expect = 5.7, Method: Composition-based stats. Identities = 16/96 (16%), Positives = 38/96 (39%), Gaps = 6/96 (6%) Query: 78 VAKVAKEFTENCGRKRV---KSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAAL 132 K+ E G R + +D+ + +D + + ++IFS D + Sbjct: 86 RTKLNAIRVEFDGSYRALLEQKQVDMLMGLDIQRIAFKKIADRILIFSKDTDLIPALKLA 145 Query: 133 QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 + + +V ++ + + S+ S L+ +D L+ Sbjct: 146 RDEGLRVD-IADLSNRLSLLSQDLKYNSDKVRKLSS 180 >gi|326427441|gb|EGD73011.1| hypothetical protein PTSG_04720 [Salpingoeca sp. ATCC 50818] Length = 615 Score = 34.7 bits (79), Expect = 5.8, Method: Composition-based stats. Identities = 10/46 (21%), Positives = 23/46 (50%), Gaps = 2/46 (4%) Query: 91 RKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQR 134 R +++ +DV A + + G++ +V++ GDG F + + Sbjct: 129 RNLMQAGVDVAFATHMIKVALKPGIDTIVLWCGDGDFFEAMKMCRE 174 >gi|29348060|ref|NP_811563.1| hypothetical protein BT_2650 [Bacteroides thetaiotaomicron VPI-5482] gi|29339962|gb|AAO77757.1| conserved hypothetical protein [Bacteroides thetaiotaomicron VPI-5482] Length = 233 Score = 34.7 bits (79), Expect = 5.9, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 27/76 (35%), Gaps = 8/76 (10%) Query: 99 DVELAVDAFEQSE--GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156 D+ L +DA + + + + DG +T L ++ V + L Sbjct: 78 DIALVMDAMDILHEGRVGCFCLVASDGDYTLLAQRIRESGLTV-----LGYGEGKTPAAL 132 Query: 157 RRQADYFMDLAYLKNE 172 R F+ LA K E Sbjct: 133 VRSCTEFL-LADRKEE 147 >gi|262279291|ref|ZP_06057076.1| 2,4-dienoyl-CoA reductase [Acinetobacter calcoaceticus RUH2202] gi|262259642|gb|EEY78375.1| 2,4-dienoyl-CoA reductase [Acinetobacter calcoaceticus RUH2202] Length = 674 Score = 34.7 bits (79), Expect = 6.1, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 26/60 (43%) Query: 100 VELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQ 159 + + +D ++H+VI +G FT + L+ K V ++ + + + RQ Sbjct: 607 LHITIDGKPSVLEVDHVVICAGQESFTAMYEQLKEDGKNVHLIGGAKEAGELDAKRAIRQ 666 >gi|260436770|ref|ZP_05790740.1| alpha/beta superfamily hydrolase [Synechococcus sp. WH 8109] gi|260414644|gb|EEX07940.1| alpha/beta superfamily hydrolase [Synechococcus sp. WH 8109] Length = 242 Score = 34.7 bits (79), Expect = 6.1, Method: Composition-based stats. Identities = 13/59 (22%), Positives = 22/59 (37%), Gaps = 5/59 (8%) Query: 11 FIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDW 69 FI G+ L A+ + I YR+LL+ + + + A+ Y Q Sbjct: 24 FIGGSYLAATPQ-----ISYRRLLEELAADGLTVHAWAYVPGFDHQRQARDAWSAFRSA 77 >gi|257056632|ref|YP_003134464.1| phenylacetate-CoA oxygenase/reductase, PaaK subunit [Saccharomonospora viridis DSM 43017] gi|256586504|gb|ACU97637.1| phenylacetate-CoA oxygenase/reductase, PaaK subunit [Saccharomonospora viridis DSM 43017] Length = 360 Score = 34.7 bits (79), Expect = 6.1, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 32/69 (46%), Gaps = 4/69 (5%) Query: 115 HLVIFSGDG---CFTTLVAALQRKVKKVTIVSTVLSDPS-MASDQLRRQADYFMDLAYLK 170 H++I +G G + L+ VT++ + M +D+L D ++D L Sbjct: 121 HVLIAAGSGITPMLSIAATVLRHPATTVTLLYGNRRTDTVMFADELADLKDRYLDRLELV 180 Query: 171 NEIARDPDE 179 + ++R+P E Sbjct: 181 HVLSREPRE 189 >gi|317178764|dbj|BAJ56552.1| hypothetical protein HPF30_0455 [Helicobacter pylori F30] Length = 243 Score = 34.7 bits (79), Expect = 6.2, Method: Composition-based stats. Identities = 15/96 (15%), Positives = 38/96 (39%), Gaps = 6/96 (6%) Query: 78 VAKVAKEFTENCGRKRV---KSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAAL 132 K+ E G + + +D+ + +D + + ++IFS D + Sbjct: 127 RTKLNTIRVEFDGSYKALLEQKQVDMLMGLDIQRIAFKKIADRILIFSKDTDLIPALKLA 186 Query: 133 QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 + + +V ++ + + S+ S L+ +D L+ Sbjct: 187 RDEGLRVD-IADLSNRLSLLSQDLKYNSDKVRKLSS 221 >gi|294674987|ref|YP_003575603.1| methyl-accepting chemotaxis protein [Prevotella ruminicola 23] gi|294473914|gb|ADE83303.1| putative methyl-accepting chemotaxis protein [Prevotella ruminicola 23] Length = 450 Score = 34.7 bits (79), Expect = 6.2, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 5/60 (8%) Query: 106 AFEQSEGLEHLV--IFS-GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADY 162 E + +E V + S D LV+ +Q+K K +T + + SM+ D++R++AD+ Sbjct: 392 MMEPAVAIEQDVQQLCSQSDRDTAQLVSDVQKKGKAIT--ELLKNLISMSDDEMRKEADH 449 >gi|294501087|ref|YP_003564787.1| isopentenyl-diphosphate delta-isomerase [Bacillus megaterium QM B1551] gi|294351024|gb|ADE71353.1| isopentenyl-diphosphate delta-isomerase [Bacillus megaterium QM B1551] Length = 350 Score = 34.7 bits (79), Expect = 6.3, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 34/74 (45%), Gaps = 7/74 (9%) Query: 103 AVDAFE---QSEGLEHL---VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDP-SMASDQ 155 AVD E L + V+ GD FT + ++R V++VT+ V M++ Sbjct: 135 AVDMLEANGLQIHLNVIQELVMPEGDRDFTDALRRIERIVREVTVPVIVKEVGFGMSAQA 194 Query: 156 LRRQADYFMDLAYL 169 +++ D +++ + Sbjct: 195 VQKLKDVGVEIVDI 208 >gi|256390750|ref|YP_003112314.1| AsnC family transcriptional regulator [Catenulispora acidiphila DSM 44928] gi|256356976|gb|ACU70473.1| transcriptional regulator, AsnC family [Catenulispora acidiphila DSM 44928] Length = 159 Score = 34.3 bits (78), Expect = 6.5, Method: Composition-based stats. Identities = 25/152 (16%), Positives = 53/152 (34%), Gaps = 19/152 (12%) Query: 22 KALGFDIDY--RKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNG---FQ 76 +A G+ +D + +++ + Y T+ + + + L G Sbjct: 8 RAGGYHLDPLSKAIIEQLQQDGR----RAYATIGRAVGLSEAAVRQRVQKLIDAGVMQIV 63 Query: 77 VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAA----- 131 V +++ D+E DA ++++V+ +G F LV Sbjct: 64 AVTDPLTVGFHRQAMIGIRAEGDLEPVADALAAMAEVDYVVMTAGS--FDLLVEVVCADD 121 Query: 132 ---LQRKVKKVTIVSTVLSDPSMASDQLRRQA 160 L+ K++ + V S S +LR+Q Sbjct: 122 DHLLEIINKRIRALPQVRSTESFVYLKLRKQT 153 >gi|317181056|dbj|BAJ58842.1| hypothetical protein HPF32_1260 [Helicobacter pylori F32] Length = 213 Score = 34.3 bits (78), Expect = 6.5, Method: Composition-based stats. Identities = 7/52 (13%), Positives = 23/52 (44%), Gaps = 2/52 (3%) Query: 87 ENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKV 136 ++ + +D+++ +D + + ++ +V+ SGD F + + Sbjct: 128 DDFIYHAKQKGVDIKIGLDIATLALKKLVQKIVLISGDSDFVPAAKLARVEG 179 >gi|145606635|ref|XP_001407125.1| hypothetical protein MGG_12005 [Magnaporthe oryzae 70-15] gi|145014317|gb|EDJ98885.1| hypothetical protein MGG_12005 [Magnaporthe oryzae 70-15] Length = 1331 Score = 34.3 bits (78), Expect = 6.7, Method: Composition-based stats. Identities = 22/99 (22%), Positives = 36/99 (36%), Gaps = 21/99 (21%) Query: 29 DYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLD-----WLHYNGFQVVAKVAK 83 DY + K F R + A Y + D E + ++ L L + GF V+ K Sbjct: 663 DYEETYKYFTRRGSRVLALAYKQLTTDSELGAARINDLKRESVESELTFAGFLVLHCPLK 722 Query: 84 EFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122 + D + AV +S +V+ +GD Sbjct: 723 D--------------DAKQAVQMLNESSH--RVVMITGD 745 >gi|261837896|gb|ACX97662.1| hypothetical protein KHP_0454 [Helicobacter pylori 51] Length = 243 Score = 34.3 bits (78), Expect = 6.8, Method: Composition-based stats. Identities = 16/96 (16%), Positives = 38/96 (39%), Gaps = 6/96 (6%) Query: 78 VAKVAKEFTENCGRKRV---KSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAAL 132 K+ E G R + +D+ + +D + + ++IFS D + Sbjct: 127 RTKLNAIRVEFDGSYRALLEQKQVDMLMGLDIQRIAFKKIADRILIFSKDTDLIPALKLA 186 Query: 133 QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 + + +V ++ + + S+ S L+ +D L+ Sbjct: 187 RDEGLRVD-IADLSNRLSLLSQDLKYNSDKVRKLSS 221 >gi|15611879|ref|NP_223530.1| hypothetical protein jhp0812 [Helicobacter pylori J99] gi|108563286|ref|YP_627602.1| hypothetical protein HPAG1_0861 [Helicobacter pylori HPAG1] gi|254779155|ref|YP_003057260.1| hypothetical protein HELPY_0474 [Helicobacter pylori B38] gi|308184662|ref|YP_003928795.1| hypothetical protein HPSJM_04455 [Helicobacter pylori SJM180] gi|4155375|gb|AAD06386.1| putative [Helicobacter pylori J99] gi|107837059|gb|ABF84928.1| hypothetical protein HPAG1_0861 [Helicobacter pylori HPAG1] gi|254001066|emb|CAX29013.1| Conserved hypothetical protein [Helicobacter pylori B38] gi|307637567|gb|ADN80017.1| hypothetical protein hp908_0891 [Helicobacter pylori 908] gi|308060582|gb|ADO02478.1| hypothetical protein HPSJM_04455 [Helicobacter pylori SJM180] gi|317014286|gb|ADU81722.1| hypothetical protein HPGAM_04515 [Helicobacter pylori Gambia94/24] gi|325996158|gb|ADZ51563.1| hypothetical protein hp2018_0861 [Helicobacter pylori 2018] gi|325997754|gb|ADZ49962.1| hypothetical protein hp2017_0859 [Helicobacter pylori 2017] Length = 243 Score = 34.3 bits (78), Expect = 6.8, Method: Composition-based stats. Identities = 16/96 (16%), Positives = 38/96 (39%), Gaps = 6/96 (6%) Query: 78 VAKVAKEFTENCGRKRV---KSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAAL 132 K+ E G R + +D+ + +D + + ++IFS D + Sbjct: 127 RTKLNAIRVEFDGSYRALLEQKQVDMLMGLDIQRIAFKKIADRILIFSKDTDLIPALKLA 186 Query: 133 QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 + + +V ++ + + S+ S L+ +D L+ Sbjct: 187 RDEGLRVD-IADLSNRLSLLSQDLKYNSDKVRKLSS 221 >gi|255537067|ref|XP_002509600.1| nucleic acid binding protein, putative [Ricinus communis] gi|223549499|gb|EEF50987.1| nucleic acid binding protein, putative [Ricinus communis] Length = 375 Score = 34.3 bits (78), Expect = 6.8, Method: Composition-based stats. Identities = 21/98 (21%), Positives = 34/98 (34%), Gaps = 17/98 (17%) Query: 65 PLLDWLHYNGFQVVA-KVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L D L GF V + + R+ + VD + E LV+ S D Sbjct: 198 GLADELKRAGFWVTTVSDKPQAADVALREHI---------VDMMD-KRRAECLVLVSDDS 247 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161 F ++ + + K +V + L+R AD Sbjct: 248 DFVGVLKEAKLRCVKTVVVGDIN------DGALKRVAD 279 >gi|257052060|ref|YP_003129893.1| nicotinate phosphoribosyltransferase [Halorhabdus utahensis DSM 12940] gi|256690823|gb|ACV11160.1| Quinolinate phosphoribosyl transferase [Halorhabdus utahensis DSM 12940] Length = 388 Score = 34.3 bits (78), Expect = 6.9, Method: Composition-based stats. Identities = 13/72 (18%), Positives = 26/72 (36%), Gaps = 7/72 (9%) Query: 99 DVELAVDAFEQSEGLEHLVIFSGD---GCFTTLVAALQ----RKVKKVTIVSTVLSDPSM 151 +V+ A+ A E L+ + + + G F +V ++ + + Sbjct: 217 EVDEAIRAVEAVPDLDSIRLDTTSSRRGDFRRIVQEVRWELDARGHDDVGIFLSGGLDPT 276 Query: 152 ASDQLRRQADYF 163 +LR AD F Sbjct: 277 TLRELRDVADGF 288 >gi|294778673|ref|ZP_06744093.1| conserved hypothetical protein [Bacteroides vulgatus PC510] gi|294447485|gb|EFG16065.1| conserved hypothetical protein [Bacteroides vulgatus PC510] Length = 234 Score = 34.3 bits (78), Expect = 7.1, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 24/68 (35%), Gaps = 7/68 (10%) Query: 99 DVELAVDAFEQSE--GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156 D+ L +DA + + + + DG ++ L ++ KV + L Sbjct: 80 DIALVIDAMDILRDGRADCFCLVASDGDYSLLAQRIREAGLKV-----LGYGEDKTPVSL 134 Query: 157 RRQADYFM 164 R F+ Sbjct: 135 VRSCSVFL 142 >gi|208434787|ref|YP_002266453.1| hypothetical protein HPG27_832 [Helicobacter pylori G27] gi|210135071|ref|YP_002301510.1| hypothetical protein HPP12_0878 [Helicobacter pylori P12] gi|217033156|ref|ZP_03438614.1| hypothetical protein HPB128_183g3 [Helicobacter pylori B128] gi|298736585|ref|YP_003729111.1| hypothetical protein HPB8_1090 [Helicobacter pylori B8] gi|208432716|gb|ACI27587.1| hypothetical protein HPG27_832 [Helicobacter pylori G27] gi|210133039|gb|ACJ08030.1| hypothetical protein HPP12_0878 [Helicobacter pylori P12] gi|216945116|gb|EEC23816.1| hypothetical protein HPB128_183g3 [Helicobacter pylori B128] gi|298355775|emb|CBI66647.1| conserved hypothetical protein [Helicobacter pylori B8] gi|317012683|gb|ADU83291.1| hypothetical protein HPLT_04445 [Helicobacter pylori Lithuania75] Length = 241 Score = 34.3 bits (78), Expect = 7.1, Method: Composition-based stats. Identities = 16/96 (16%), Positives = 38/96 (39%), Gaps = 6/96 (6%) Query: 78 VAKVAKEFTENCGRKRV---KSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAAL 132 K+ E G R + +D+ + +D + + ++IFS D + Sbjct: 127 RTKLNAIRVEFDGSYRALLEQKQVDMLMGLDIQRIAFKKIADRILIFSKDTDLIPALKLA 186 Query: 133 QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 + + +V ++ + + S+ S L+ +D L+ Sbjct: 187 RDEGLRVD-IADLSNRLSLLSQDLKYNSDKVRKLSS 221 >gi|207093089|ref|ZP_03240876.1| hypothetical protein HpylHP_09914 [Helicobacter pylori HPKX_438_AG0C1] Length = 240 Score = 34.3 bits (78), Expect = 7.1, Method: Composition-based stats. Identities = 16/96 (16%), Positives = 38/96 (39%), Gaps = 6/96 (6%) Query: 78 VAKVAKEFTENCGRKRV---KSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAAL 132 K+ E G R + +D+ + +D + + ++IFS D + Sbjct: 126 RTKLNAIRVEFDGSYRALLEQKQVDMLMGLDIQRIAFKKIADRILIFSKDTDLIPALKLA 185 Query: 133 QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 + + +V ++ + + S+ S L+ +D L+ Sbjct: 186 RDEGLRVD-IADLSNRLSLLSQDLKYNSDKVRKLSS 220 >gi|319441482|ref|ZP_07990638.1| hypothetical protein CvarD4_06921 [Corynebacterium variabile DSM 44702] Length = 225 Score = 34.3 bits (78), Expect = 7.1, Method: Composition-based stats. Identities = 30/123 (24%), Positives = 43/123 (34%), Gaps = 26/123 (21%) Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG------LEH 115 + +D L GF V AK K+S D ++ D + L+ Sbjct: 95 QVRGWVDALRNVGFAVFAKP-------------KTSDDSDVDPDMLDHIRRRHAEGVLDG 141 Query: 116 LVIFSGDG-CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 LV+ S DG F L+ L I TVL A + F+DL + Sbjct: 142 LVVASADGRNFRELLEELAD-----EIPVTVLGFREHAHWAVDNPVLDFVDLEDIDGVF- 195 Query: 175 RDP 177 R+P Sbjct: 196 REP 198 >gi|78187611|ref|YP_375654.1| folylpolyglutamate synthetase [Chlorobium luteolum DSM 273] gi|78167513|gb|ABB24611.1| Folylpolyglutamate synthetase [Chlorobium luteolum DSM 273] Length = 443 Score = 34.3 bits (78), Expect = 7.1, Method: Composition-based stats. Identities = 21/116 (18%), Positives = 40/116 (34%), Gaps = 8/116 (6%) Query: 50 TTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELA-VDAFE 108 V D + LD L G++ ++ + + D A VDA Sbjct: 279 VAVAEDAGVGPEAVREGLDALASTGYRGRLELLGHRPDTFLDVS--HNADGMRATVDALM 336 Query: 109 --QSEGLEHLVIFS--GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160 S + V+F D +++ L R + + + S+ +AS++L Sbjct: 337 PFLSRYRDARVLFGLVSDKDSESMIRELMRLRCRFA-TTGLPSERGVASEELAEIC 391 >gi|225555359|gb|EEH03651.1| mitochondrial-processing peptidase subunit alpha [Ajellomyces capsulatus G186AR] Length = 589 Score = 34.3 bits (78), Expect = 7.2, Method: Composition-based stats. Identities = 8/37 (21%), Positives = 15/37 (40%) Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160 L +Q ++V + ++ +D LRR A Sbjct: 501 ELEDLGRQVQAHGRRVGVREMSARIDALTADDLRRVA 537 >gi|157370064|ref|YP_001478053.1| isochorismatase hydrolase [Serratia proteamaculans 568] gi|317411928|sp|A8GCT5|RUTB_SERP5 RecName: Full=Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB; AltName: Full=Ureidoacrylate amidohydrolase gi|157321828|gb|ABV40925.1| isochorismatase hydrolase [Serratia proteamaculans 568] Length = 248 Score = 34.3 bits (78), Expect = 7.2, Method: Composition-based stats. Identities = 27/129 (20%), Positives = 47/129 (36%), Gaps = 22/129 (17%) Query: 2 FDPREKIALFIDGANLYASSKAL----GFDI--------DYRKLLKAFRSRAIVIRAYYY 49 F P+E + +D N YAS GFDI + ++ + A R+ I + + Sbjct: 32 FAPQETALIVVDMQNAYASQGGYLDLAGFDISATAPVIANIKRAISAARAAGIKVIFF-- 89 Query: 50 TTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ 109 D + + +W N K ++ E G+ + D +L VD E Sbjct: 90 -QNGWDNQYVEAGGQGSPNWHKSN----ALKTMRKRPELMGKLLARGDWDYDL-VD--EL 141 Query: 110 SEGLEHLVI 118 +V+ Sbjct: 142 QPQAGDIVL 150 >gi|326317587|ref|YP_004235259.1| dihydrolipoyl dehydrogenase [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374423|gb|ADX46692.1| Dihydrolipoyl dehydrogenase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 470 Score = 34.3 bits (78), Expect = 7.2, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 27/62 (43%), Gaps = 7/62 (11%) Query: 109 QSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIV------STVLSDPSMASDQLRRQADY 162 S+ L+ +++ +G + ++++ ++V IV +T M S L AD Sbjct: 1 MSDTLDVIILGAGSAGLA-ALREVRKRTERVRIVNDGPWGTTCARVGCMPSKMLIEAADA 59 Query: 163 FM 164 F Sbjct: 60 FH 61 >gi|51892075|ref|YP_074766.1| hypothetical protein STH937 [Symbiobacterium thermophilum IAM 14863] gi|51855764|dbj|BAD39922.1| conserved hypothetical protein [Symbiobacterium thermophilum IAM 14863] Length = 329 Score = 34.3 bits (78), Expect = 7.2, Method: Composition-based stats. Identities = 18/115 (15%), Positives = 38/115 (33%), Gaps = 29/115 (25%) Query: 21 SKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAK 80 ++ LG Y L+ FRSR + AYY + DPE + H + + + Sbjct: 28 ARMLGR---YAFFLERFRSRYDLAEAYYRRALARDPEDAQTRRH----------YAIFLE 74 Query: 81 VAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVA-ALQR 134 + + + + + + ++ G + + A+Q Sbjct: 75 TVRGRYDEADAQYRAA----------LRLAPN-DPALL----GDYADFLEHAVQD 114 >gi|325851759|ref|ZP_08170981.1| hypothetical protein HMPREF9303_0793 [Prevotella denticola CRIS 18C-A] gi|325484715|gb|EGC87625.1| hypothetical protein HMPREF9303_0793 [Prevotella denticola CRIS 18C-A] Length = 239 Score = 34.3 bits (78), Expect = 7.3, Method: Composition-based stats. Identities = 28/163 (17%), Positives = 54/163 (33%), Gaps = 39/163 (23%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYT-----TVVGDPEQQFSP 62 IA+ IDG N+ ++ LG DI + S I Y + E+ + Sbjct: 14 IAILIDGDNV--AADKLG-DI-----ISFVSSYGNPIIRRIYADWTKSAMKRWKEEAKTF 65 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVIFS 120 L++ L Y G + D+ L ++A + ++ I S Sbjct: 66 SFRLVEALSYVGVKNTT-------------------DMALVIEAMDLLHGKTVQGFCIVS 106 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163 D +T L ++ + ++ + + L+ F Sbjct: 107 SDSDYTLLAQRIREEG----LLVLGYGEQKTPA-SLQNSCHEF 144 >gi|260186550|ref|ZP_05764024.1| imidazole glycerol phosphate synthase subunit HisH [Mycobacterium tuberculosis CPHL_A] gi|289447210|ref|ZP_06436954.1| amidotransferase hisH [Mycobacterium tuberculosis CPHL_A] gi|289420168|gb|EFD17369.1| amidotransferase hisH [Mycobacterium tuberculosis CPHL_A] Length = 206 Score = 34.3 bits (78), Expect = 7.4, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 2/42 (4%) Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156 +V+ G G + ALQR +V + T +D +M +D L Sbjct: 6 VVVLDYGSGNLRSAQRALQRVGAEVEV--TADTDAAMTADGL 45 >gi|150004082|ref|YP_001298826.1| hypothetical protein BVU_1517 [Bacteroides vulgatus ATCC 8482] gi|154491570|ref|ZP_02031196.1| hypothetical protein PARMER_01181 [Parabacteroides merdae ATCC 43184] gi|149932506|gb|ABR39204.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482] gi|154088371|gb|EDN87416.1| hypothetical protein PARMER_01181 [Parabacteroides merdae ATCC 43184] Length = 234 Score = 34.3 bits (78), Expect = 7.4, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 24/68 (35%), Gaps = 7/68 (10%) Query: 99 DVELAVDAFEQSE--GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156 D+ L +DA + + + + DG ++ L ++ KV + L Sbjct: 80 DIALVIDAMDILRDGRADCFCLVASDGDYSLLAQRIREAGLKV-----LGYGEDKTPVSL 134 Query: 157 RRQADYFM 164 R F+ Sbjct: 135 VRSCSVFL 142 >gi|254303168|ref|ZP_04970526.1| iron-sulfur (Fe-S) dehydrogenase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323360|gb|EDK88610.1| iron-sulfur (Fe-S) dehydrogenase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 434 Score = 34.3 bits (78), Expect = 7.4, Method: Composition-based stats. Identities = 11/51 (21%), Positives = 22/51 (43%) Query: 16 NLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 N+ +K +D DY +++ F+ I++ A Y D + F + Sbjct: 271 NIKKMNKKSNYDFDYENIIRIFKKYRILVHASYVIGYDYDTKDYFQEILDF 321 >gi|297795213|ref|XP_002865491.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297311326|gb|EFH41750.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 228 Score = 34.3 bits (78), Expect = 7.5, Method: Composition-based stats. Identities = 8/36 (22%), Positives = 18/36 (50%) Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSM 151 +++ +GDG + +V L+ + V + + S M Sbjct: 100 ILLVAGDGDYQDIVDHLRTRGHNVMLAQIIRSSNLM 135 >gi|148242472|ref|YP_001227629.1| glycosyltransferase of family GT20; trehalose-phosphate synthase [Synechococcus sp. RCC307] gi|147850782|emb|CAK28276.1| Glycosyltransferase of family GT20; probable trehalose-phosphate synthase [Synechococcus sp. RCC307] Length = 488 Score = 34.3 bits (78), Expect = 7.5, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 22/51 (43%), Gaps = 4/51 (7%) Query: 132 LQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182 L+ + + V +VST + LR A + L +I RD + +K Sbjct: 246 LRYQGRTVQLVSTPVGTSPDVIQALRDSA----PVQDLIEDIERDTKKGRK 292 >gi|325115612|emb|CBZ51167.1| putative 4-nitrophenylphosphatase [Neospora caninum Liverpool] Length = 560 Score = 34.3 bits (78), Expect = 7.7, Method: Composition-based stats. Identities = 21/115 (18%), Positives = 35/115 (30%), Gaps = 31/115 (26%) Query: 56 PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE-QSEGLE 114 P LD L +G++V+A A D + + Sbjct: 212 PAAFVDQQQDSLDALTRHGYRVIA---------------------GSASDPLADFVDRYD 250 Query: 115 HL------VIFSGDGCFT---TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160 V+ G F + + AL++K K+V + S L R+A Sbjct: 251 TFLFDVDGVLVMGGQQFAGAPSALQALRQKGKRVIFFTNGASKSRRTCVALLRKA 305 >gi|145223684|ref|YP_001134362.1| 5'-3' exonuclease [Mycobacterium gilvum PYR-GCK] gi|145216170|gb|ABP45574.1| 5'-3' exonuclease [Mycobacterium gilvum PYR-GCK] Length = 321 Score = 34.3 bits (78), Expect = 7.7, Method: Composition-based stats. Identities = 15/74 (20%), Positives = 29/74 (39%), Gaps = 8/74 (10%) Query: 107 FEQSEGLEHLVIFSGDGCFTTLVA----ALQRKVKKVTIVSTVLSDPSMASDQ----LRR 158 +E + +V+ SGD LV ++ + V P+ +D L R Sbjct: 136 LAAAEERDPVVVVSGDRDLLQLVRDEPVPVRVLYLGKGLAKAVKWGPAEVADTYGVPLER 195 Query: 159 QADYFMDLAYLKNE 172 +++LA L+ + Sbjct: 196 AGSAYVELALLRGD 209 >gi|315444011|ref|YP_004076890.1| 5'-3' exonuclease (including N-terminal domain of PolI) [Mycobacterium sp. Spyr1] gi|315262314|gb|ADT99055.1| 5'-3' exonuclease (including N-terminal domain of PolI) [Mycobacterium sp. Spyr1] Length = 324 Score = 34.3 bits (78), Expect = 7.7, Method: Composition-based stats. Identities = 15/74 (20%), Positives = 29/74 (39%), Gaps = 8/74 (10%) Query: 107 FEQSEGLEHLVIFSGDGCFTTLVAA----LQRKVKKVTIVSTVLSDPSMASDQ----LRR 158 +E + +V+ SGD LV ++ + V P+ +D L R Sbjct: 139 LAAAEERDPVVVVSGDRDLLQLVRDEPVPVRVLYLGKGLAKAVKWGPAEVADTYGVPLER 198 Query: 159 QADYFMDLAYLKNE 172 +++LA L+ + Sbjct: 199 AGSAYVELALLRGD 212 >gi|317182186|dbj|BAJ59970.1| hypothetical protein HPF57_0896 [Helicobacter pylori F57] Length = 241 Score = 34.3 bits (78), Expect = 7.9, Method: Composition-based stats. Identities = 16/96 (16%), Positives = 38/96 (39%), Gaps = 6/96 (6%) Query: 78 VAKVAKEFTENCGRKRV---KSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAAL 132 K+ E G R + +D+ + +D + + ++IFS D + Sbjct: 127 RTKLNAIRVEFDGSYRALLEQKQVDMLMGLDIQRIAFKKIADRILIFSKDTDLIPALKLA 186 Query: 133 QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 + + +V ++ + + S+ S L+ +D L+ Sbjct: 187 RDEGLRVD-IADLSNRLSLLSQDLKYNSDKVRKLSS 221 >gi|217034486|ref|ZP_03439897.1| hypothetical protein HP9810_873g2 [Helicobacter pylori 98-10] gi|216943027|gb|EEC22506.1| hypothetical protein HP9810_873g2 [Helicobacter pylori 98-10] gi|315586456|gb|ADU40837.1| conserved hypothetical protein [Helicobacter pylori 35A] gi|317177294|dbj|BAJ55083.1| hypothetical protein HPF16_0486 [Helicobacter pylori F16] gi|317180640|dbj|BAJ58426.1| hypothetical protein HPF32_0844 [Helicobacter pylori F32] gi|332673318|gb|AEE70135.1| conserved hypothetical protein [Helicobacter pylori 83] Length = 241 Score = 34.3 bits (78), Expect = 7.9, Method: Composition-based stats. Identities = 16/96 (16%), Positives = 38/96 (39%), Gaps = 6/96 (6%) Query: 78 VAKVAKEFTENCGRKRV---KSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAAL 132 K+ E G R + +D+ + +D + + ++IFS D + Sbjct: 127 RTKLNAIRVEFDGSYRALLEQKQVDMLMGLDIQRIAFKKIADRILIFSKDTDLIPALKLA 186 Query: 133 QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 + + +V ++ + + S+ S L+ +D L+ Sbjct: 187 RDEGLRVD-IADLSNRLSLLSQDLKYNSDKVRKLSS 221 >gi|15608740|ref|NP_216118.1| imidazole glycerol phosphate synthase subunit HisH [Mycobacterium tuberculosis H37Rv] gi|148661397|ref|YP_001282920.1| imidazole glycerol phosphate synthase subunit HisH [Mycobacterium tuberculosis H37Ra] gi|167970641|ref|ZP_02552918.1| imidazole glycerol phosphate synthase subunit HisH [Mycobacterium tuberculosis H37Ra] gi|307084182|ref|ZP_07493295.1| amidotransferase hisH [Mycobacterium tuberculosis SUMu012] gi|12229824|sp|O06589|HIS5_MYCTU RecName: Full=Imidazole glycerol phosphate synthase subunit hisH; AltName: Full=IGP synthase glutamine amidotransferase subunit; AltName: Full=IGP synthase subunit hisH; AltName: Full=ImGP synthase subunit hisH; Short=IGPS subunit hisH gi|2117235|emb|CAB09092.1| Probable amidotransferase hisH [Mycobacterium tuberculosis H37Rv] gi|148505549|gb|ABQ73358.1| imidazole glycerol phosphate synthase subunit HisH [Mycobacterium tuberculosis H37Ra] gi|308366191|gb|EFP55042.1| amidotransferase hisH [Mycobacterium tuberculosis SUMu012] Length = 206 Score = 34.3 bits (78), Expect = 7.9, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 2/42 (4%) Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156 +V+ G G + ALQR +V + T +D +M +D L Sbjct: 6 VVVLDYGSGNLRSAQRALQRVGAEVEV--TADTDAAMTADGL 45 >gi|15841055|ref|NP_336092.1| imidazole glycerol phosphate synthase subunit HisH [Mycobacterium tuberculosis CDC1551] gi|31792788|ref|NP_855281.1| imidazole glycerol phosphate synthase subunit HisH [Mycobacterium bovis AF2122/97] gi|121637509|ref|YP_977732.1| imidazole glycerol phosphate synthase subunit HisH [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148822809|ref|YP_001287563.1| imidazole glycerol phosphate synthase subunit HisH [Mycobacterium tuberculosis F11] gi|215404097|ref|ZP_03416278.1| imidazole glycerol phosphate synthase subunit HisH [Mycobacterium tuberculosis 02_1987] gi|215411246|ref|ZP_03420054.1| imidazole glycerol phosphate synthase subunit HisH [Mycobacterium tuberculosis 94_M4241A] gi|215428079|ref|ZP_03425998.1| imidazole glycerol phosphate synthase subunit HisH [Mycobacterium tuberculosis T92] gi|215430493|ref|ZP_03428412.1| imidazole glycerol phosphate synthase subunit HisH [Mycobacterium tuberculosis EAS054] gi|215445786|ref|ZP_03432538.1| imidazole glycerol phosphate synthase subunit HisH [Mycobacterium tuberculosis T85] gi|218753309|ref|ZP_03532105.1| imidazole glycerol phosphate synthase subunit HisH [Mycobacterium tuberculosis GM 1503] gi|219557522|ref|ZP_03536598.1| imidazole glycerol phosphate synthase subunit HisH [Mycobacterium tuberculosis T17] gi|224989984|ref|YP_002644671.1| imidazole glycerol phosphate synthase [Mycobacterium bovis BCG str. Tokyo 172] gi|253799360|ref|YP_003032361.1| amidotransferase hisH [Mycobacterium tuberculosis KZN 1435] gi|254231805|ref|ZP_04925132.1| amidotransferase hisH [Mycobacterium tuberculosis C] gi|254364452|ref|ZP_04980498.1| amidotransferase hisH [Mycobacterium tuberculosis str. Haarlem] gi|254550605|ref|ZP_05141052.1| imidazole glycerol phosphate synthase subunit HisH [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260200662|ref|ZP_05768153.1| imidazole glycerol phosphate synthase subunit HisH [Mycobacterium tuberculosis T46] gi|260204871|ref|ZP_05772362.1| imidazole glycerol phosphate synthase subunit HisH [Mycobacterium tuberculosis K85] gi|289443054|ref|ZP_06432798.1| imidazole glycerol phosphate synthase, glutamine amidotransferase subunit [Mycobacterium tuberculosis T46] gi|289554624|ref|ZP_06443834.1| amidotransferase hisH [Mycobacterium tuberculosis KZN 605] gi|289569645|ref|ZP_06449872.1| amidotransferase hisH [Mycobacterium tuberculosis T17] gi|289574269|ref|ZP_06454496.1| amidotransferase hisH [Mycobacterium tuberculosis K85] gi|289745961|ref|ZP_06505339.1| imidazole glycerol phosphate synthase subunit hisH [Mycobacterium tuberculosis 02_1987] gi|289751302|ref|ZP_06510680.1| amidotransferase hisH [Mycobacterium tuberculosis T92] gi|289753688|ref|ZP_06513066.1| imidazole glycerol phosphate synthase subunit HisH [Mycobacterium tuberculosis EAS054] gi|289757704|ref|ZP_06517082.1| imidazole glycerol phosphate synthase subunit HisH [Mycobacterium tuberculosis T85] gi|289761750|ref|ZP_06521128.1| amidotransferase hisH [Mycobacterium tuberculosis GM 1503] gi|294996552|ref|ZP_06802243.1| imidazole glycerol phosphate synthase subunit HisH [Mycobacterium tuberculosis 210] gi|297634155|ref|ZP_06951935.1| imidazole glycerol phosphate synthase subunit HisH [Mycobacterium tuberculosis KZN 4207] gi|297731142|ref|ZP_06960260.1| imidazole glycerol phosphate synthase subunit HisH [Mycobacterium tuberculosis KZN R506] gi|298525096|ref|ZP_07012505.1| amidotransferase HisH [Mycobacterium tuberculosis 94_M4241A] gi|306775788|ref|ZP_07414125.1| amidotransferase hisH [Mycobacterium tuberculosis SUMu001] gi|306779599|ref|ZP_07417936.1| amidotransferase hisH [Mycobacterium tuberculosis SUMu002] gi|306784332|ref|ZP_07422654.1| amidotransferase hisH [Mycobacterium tuberculosis SUMu003] gi|306788700|ref|ZP_07427022.1| amidotransferase hisH [Mycobacterium tuberculosis SUMu004] gi|306793037|ref|ZP_07431339.1| amidotransferase hisH [Mycobacterium tuberculosis SUMu005] gi|306797418|ref|ZP_07435720.1| amidotransferase hisH [Mycobacterium tuberculosis SUMu006] gi|306803298|ref|ZP_07439966.1| amidotransferase hisH [Mycobacterium tuberculosis SUMu008] gi|306807879|ref|ZP_07444547.1| amidotransferase hisH [Mycobacterium tuberculosis SUMu007] gi|306967696|ref|ZP_07480357.1| amidotransferase hisH [Mycobacterium tuberculosis SUMu009] gi|306971895|ref|ZP_07484556.1| amidotransferase hisH [Mycobacterium tuberculosis SUMu010] gi|307079611|ref|ZP_07488781.1| amidotransferase hisH [Mycobacterium tuberculosis SUMu011] gi|313658474|ref|ZP_07815354.1| imidazole glycerol phosphate synthase subunit HisH [Mycobacterium tuberculosis KZN V2475] gi|38257907|sp|P59957|HIS5_MYCBO RecName: Full=Imidazole glycerol phosphate synthase subunit hisH; AltName: Full=IGP synthase glutamine amidotransferase subunit; AltName: Full=IGP synthase subunit hisH; AltName: Full=ImGP synthase subunit hisH; Short=IGPS subunit hisH gi|13881267|gb|AAK45906.1| amidotransferase HisH [Mycobacterium tuberculosis CDC1551] gi|31618378|emb|CAD96296.1| Probable amidotransferase hisH [Mycobacterium bovis AF2122/97] gi|121493156|emb|CAL71627.1| Probable amidotransferase hisH [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124600864|gb|EAY59874.1| amidotransferase hisH [Mycobacterium tuberculosis C] gi|134149966|gb|EBA42011.1| amidotransferase hisH [Mycobacterium tuberculosis str. Haarlem] gi|148721336|gb|ABR05961.1| amidotransferase hisH [Mycobacterium tuberculosis F11] gi|224773097|dbj|BAH25903.1| imidazole glycerol phosphate synthase [Mycobacterium bovis BCG str. Tokyo 172] gi|253320863|gb|ACT25466.1| amidotransferase hisH [Mycobacterium tuberculosis KZN 1435] gi|289415973|gb|EFD13213.1| imidazole glycerol phosphate synthase, glutamine amidotransferase subunit [Mycobacterium tuberculosis T46] gi|289439256|gb|EFD21749.1| amidotransferase hisH [Mycobacterium tuberculosis KZN 605] gi|289538700|gb|EFD43278.1| amidotransferase hisH [Mycobacterium tuberculosis K85] gi|289543399|gb|EFD47047.1| amidotransferase hisH [Mycobacterium tuberculosis T17] gi|289686489|gb|EFD53977.1| imidazole glycerol phosphate synthase subunit hisH [Mycobacterium tuberculosis 02_1987] gi|289691889|gb|EFD59318.1| amidotransferase hisH [Mycobacterium tuberculosis T92] gi|289694275|gb|EFD61704.1| imidazole glycerol phosphate synthase subunit HisH [Mycobacterium tuberculosis EAS054] gi|289709256|gb|EFD73272.1| amidotransferase hisH [Mycobacterium tuberculosis GM 1503] gi|289713268|gb|EFD77280.1| imidazole glycerol phosphate synthase subunit HisH [Mycobacterium tuberculosis T85] gi|298494890|gb|EFI30184.1| amidotransferase HisH [Mycobacterium tuberculosis 94_M4241A] gi|308215703|gb|EFO75102.1| amidotransferase hisH [Mycobacterium tuberculosis SUMu001] gi|308327454|gb|EFP16305.1| amidotransferase hisH [Mycobacterium tuberculosis SUMu002] gi|308330880|gb|EFP19731.1| amidotransferase hisH [Mycobacterium tuberculosis SUMu003] gi|308334715|gb|EFP23566.1| amidotransferase hisH [Mycobacterium tuberculosis SUMu004] gi|308338492|gb|EFP27343.1| amidotransferase hisH [Mycobacterium tuberculosis SUMu005] gi|308342225|gb|EFP31076.1| amidotransferase hisH [Mycobacterium tuberculosis SUMu006] gi|308345689|gb|EFP34540.1| amidotransferase hisH [Mycobacterium tuberculosis SUMu007] gi|308349989|gb|EFP38840.1| amidotransferase hisH [Mycobacterium tuberculosis SUMu008] gi|308354626|gb|EFP43477.1| amidotransferase hisH [Mycobacterium tuberculosis SUMu009] gi|308358582|gb|EFP47433.1| amidotransferase hisH [Mycobacterium tuberculosis SUMu010] gi|308362508|gb|EFP51359.1| amidotransferase hisH [Mycobacterium tuberculosis SUMu011] gi|323719861|gb|EGB28974.1| amidotransferase hisH [Mycobacterium tuberculosis CDC1551A] gi|326903215|gb|EGE50148.1| amidotransferase hisH [Mycobacterium tuberculosis W-148] gi|328459110|gb|AEB04533.1| amidotransferase hisH [Mycobacterium tuberculosis KZN 4207] Length = 206 Score = 34.3 bits (78), Expect = 7.9, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 2/42 (4%) Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156 +V+ G G + ALQR +V + T +D +M +D L Sbjct: 6 VVVLDYGSGNLRSAQRALQRVGAEVEV--TADTDAAMTADGL 45 >gi|317014531|gb|ADU81967.1| hypothetical protein HPGAM_05910 [Helicobacter pylori Gambia94/24] Length = 238 Score = 34.3 bits (78), Expect = 7.9, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 3/65 (4%) Query: 98 MDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQ 155 +D LA D + ++ L +V+FS D F ++ A K +V ++ + P+ Sbjct: 174 VDALLAHDITKLYCTKPLGCVVLFSKDTDFVPVLEAAWEKGFEV-FIANIQESPNFVPSD 232 Query: 156 LRRQA 160 L+ A Sbjct: 233 LKSLA 237 >gi|154286908|ref|XP_001544249.1| mitochondrial processing peptidase alpha subunit [Ajellomyces capsulatus NAm1] gi|150407890|gb|EDN03431.1| mitochondrial processing peptidase alpha subunit [Ajellomyces capsulatus NAm1] Length = 226 Score = 34.3 bits (78), Expect = 8.0, Method: Composition-based stats. Identities = 8/37 (21%), Positives = 15/37 (40%) Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160 L +Q ++V + ++ +D LRR A Sbjct: 138 ELEDLGRQVQAHGRRVGVREMSARIDALTADDLRRVA 174 >gi|16332015|ref|NP_442743.1| ExsB protein [Synechocystis sp. PCC 6803] gi|1001327|dbj|BAA10814.1| ExsB protein [Synechocystis sp. PCC 6803] Length = 271 Score = 34.3 bits (78), Expect = 8.0, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 20/46 (43%), Gaps = 2/46 (4%) Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161 +V+ SG T+ A +R+ +V +S +LR AD Sbjct: 45 VVLLSGGLDSATVAAIAKREGYRVIALSFNYGQRH--DRELRAAAD 88 >gi|15678199|ref|NP_275314.1| glucosamine--fructose-6-phosphate aminotransferase [Methanothermobacter thermautotrophicus str. Delta H] gi|6225451|sp|O26273|GLMS_METTH RecName: Full=Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; AltName: Full=D-fructose-6-phosphate amidotransferase; AltName: Full=GFAT; AltName: Full=Glucosamine-6-phosphate synthase; AltName: Full=Hexosephosphate aminotransferase; AltName: Full=L-glutamine-D-fructose-6-phosphate amidotransferase gi|2621214|gb|AAB84677.1| glutamine-fructose-6-phosphate transaminase [Methanothermobacter thermautotrophicus str. Delta H] Length = 590 Score = 34.3 bits (78), Expect = 8.1, Method: Composition-based stats. Identities = 9/39 (23%), Positives = 20/39 (51%), Gaps = 6/39 (15%) Query: 129 VAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 V ++ + +V + S++ + LR++AD F+ L Sbjct: 514 VEEVRARGARV------IGVGSISDESLRKEADDFIGLD 546 >gi|293190370|ref|ZP_06608802.1| conserved hypothetical protein [Actinomyces odontolyticus F0309] gi|292820954|gb|EFF79909.1| conserved hypothetical protein [Actinomyces odontolyticus F0309] Length = 190 Score = 34.3 bits (78), Expect = 8.2, Method: Composition-based stats. Identities = 13/82 (15%), Positives = 29/82 (35%), Gaps = 12/82 (14%) Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVEL--AVDAFEQSEGLEHLVIFSGD 122 + L + V+ +V +DV L +DA + +++ S D Sbjct: 70 GFVQALTAMDYSVI------PLSGPADMKV---VDVGLQRTMDAIANLGSGD-VILASHD 119 Query: 123 GCFTTLVAALQRKVKKVTIVST 144 F + L + ++V ++ Sbjct: 120 ADFLPQIETLLDQGRRVAVMCF 141 >gi|290968815|ref|ZP_06560352.1| 6-phosphogluconate dehydrogenase, decarboxylating [Megasphaera genomosp. type_1 str. 28L] gi|290781111|gb|EFD93702.1| 6-phosphogluconate dehydrogenase, decarboxylating [Megasphaera genomosp. type_1 str. 28L] Length = 469 Score = 33.9 bits (77), Expect = 8.4, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 26/52 (50%), Gaps = 5/52 (9%) Query: 20 SSKALGFDIDYRKLLKAFRSRAIVIRAYYY----TTVVGDPEQQFSPLHPLL 67 +S+ G+ +DYR++ + FR+ +I+A + T D + + HP Sbjct: 340 ASQTYGWQLDYRRIAEIFRAGC-IIQAKFLDTISTAYAEDAQVENLLFHPFF 390 >gi|222619216|gb|EEE55348.1| hypothetical protein OsJ_03373 [Oryza sativa Japonica Group] Length = 327 Score = 33.9 bits (77), Expect = 8.5, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 2/43 (4%) Query: 110 SEGLEHLVIFSGDGCFTTLVA--ALQRKVKKVTIVSTVLSDPS 150 L+ L++FS DG F L L+RK + V+ ++ P Sbjct: 215 MHHLDFLLLFSMDGDFAPLPELVKLRRKHMEHLFVARMVVVPP 257 >gi|169611408|ref|XP_001799122.1| hypothetical protein SNOG_08816 [Phaeosphaeria nodorum SN15] gi|111062864|gb|EAT83984.1| hypothetical protein SNOG_08816 [Phaeosphaeria nodorum SN15] Length = 277 Score = 33.9 bits (77), Expect = 8.5, Method: Composition-based stats. Identities = 15/102 (14%), Positives = 33/102 (32%), Gaps = 7/102 (6%) Query: 81 VAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVT 140 ++F G+ +M ++ A+D + I S D FT L + ++ + V Sbjct: 62 PIQQFAYTSGKNATDGAMIID-AMDLL-YTGRYTAFCIVSSDSDFTRLASRIREQAVTVY 119 Query: 141 IVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182 + + + + F L D++ Sbjct: 120 GFGERKTPHAFVA-----ACNKFTYFDVLNMTFEEPATADRQ 156 >gi|300919736|ref|ZP_07136220.1| helix-turn-helix protein [Escherichia coli MS 115-1] gi|300413196|gb|EFJ96506.1| helix-turn-helix protein [Escherichia coli MS 115-1] Length = 195 Score = 33.9 bits (77), Expect = 8.7, Method: Composition-based stats. Identities = 23/126 (18%), Positives = 46/126 (36%), Gaps = 17/126 (13%) Query: 34 LKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKR 93 L S+ ++ Y V D + + + + G+ + AK FT+ Sbjct: 3 LTFKTSKGNIMAILGYCRVSTDDQSITNQQMQIEEA----GYNI----AKWFTDEAVSGS 54 Query: 94 VKSSMDVELAVDAFEQSEGLEHLVIFSGDG------CFTTLVAALQRKVKKVTIVSTVLS 147 VK+S+ + + + +V+ + D + V ALQ K VT++S Sbjct: 55 VKASLRNGFSS-LLAYAREGDTVVVVAVDRLGRDTIDVLSTVKALQAKG--VTVISLREG 111 Query: 148 DPSMAS 153 ++ Sbjct: 112 FDLSSA 117 >gi|15645947|ref|NP_208126.1| hypothetical protein HP1334 [Helicobacter pylori 26695] gi|2314514|gb|AAD08389.1| predicted coding region HP1334 [Helicobacter pylori 26695] Length = 224 Score = 33.9 bits (77), Expect = 8.8, Method: Composition-based stats. Identities = 7/52 (13%), Positives = 23/52 (44%), Gaps = 2/52 (3%) Query: 87 ENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKV 136 ++ + +D+++ +D + + ++ +V+ SGD F + + Sbjct: 140 DDFIYHAKQKGVDIKIGLDIATLALKKLVQKIVLISGDSDFVPASKLARVEG 191 >gi|188528123|ref|YP_001910810.1| hypothetical protein HPSH_06900 [Helicobacter pylori Shi470] gi|188144363|gb|ACD48780.1| hypothetical protein HPSH_06900 [Helicobacter pylori Shi470] Length = 121 Score = 33.9 bits (77), Expect = 8.8, Method: Composition-based stats. Identities = 7/52 (13%), Positives = 23/52 (44%), Gaps = 2/52 (3%) Query: 87 ENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKV 136 ++ + +D+++ +D + + ++ +V+ SGD F + + Sbjct: 35 DDFIYHAKQKGVDIKIGLDIATLALKKLVQKIVLISGDSDFVPAAKLARVEG 86 >gi|239814200|ref|YP_002943110.1| polysaccharide pyruvyl transferase [Variovorax paradoxus S110] gi|239800777|gb|ACS17844.1| putative polysaccharide pyruvyl transferase [Variovorax paradoxus S110] Length = 387 Score = 33.9 bits (77), Expect = 9.0, Method: Composition-based stats. Identities = 24/119 (20%), Positives = 41/119 (34%), Gaps = 22/119 (18%) Query: 33 LLKAFRSRAIVIRAY--YYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCG 90 L F + A +Y T ++ S LH + + QVV A + Sbjct: 149 FLGRFLVGRFLKNARPAFYATR---DQESASNLHNYFR-IPRSDIQVVPDPALICADAFS 204 Query: 91 RK-RVKSSMDVELAV---DAFEQSEGLEHLVIFSGDGC------FTTLVAALQRKVKKV 139 + + + D+ + V DA + E G F TL +L+ + K+V Sbjct: 205 DELSPEKNWDIGICVSSLDALVMNSEYE------GSNSTPSAKFFATLAESLRAEGKRV 257 >gi|154483449|ref|ZP_02025897.1| hypothetical protein EUBVEN_01152 [Eubacterium ventriosum ATCC 27560] gi|149735701|gb|EDM51587.1| hypothetical protein EUBVEN_01152 [Eubacterium ventriosum ATCC 27560] Length = 222 Score = 33.9 bits (77), Expect = 9.0, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 4/53 (7%) Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 + VIF+GD F + L+ KKV I S S++L+ A+ ++++ Sbjct: 80 DVFVIFTGDAHFNLAIKYLRELKKKVIIYGVKRSL----SNKLKSSANSYVEM 128 >gi|304312940|ref|YP_003812538.1| Predicted AD-superfamily hydrolase subfamily IA [gamma proteobacterium HdN1] gi|301798673|emb|CBL46905.1| Predicted AD-superfamily hydrolase subfamily IA [gamma proteobacterium HdN1] Length = 215 Score = 33.9 bits (77), Expect = 9.1, Method: Composition-based stats. Identities = 33/165 (20%), Positives = 58/165 (35%), Gaps = 28/165 (16%) Query: 30 YRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQ--VVAKVAKEFTE 87 Y +L + + A++Y DP Q F+ + L+D L V ++ + Sbjct: 58 YPELSEQDVQQVRERYAHFYVAHQQDPTQFFAGIPALMDDLRRKSCTLGVATGKSRRGLD 117 Query: 88 ------------------NCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLV 129 + + + + M +EL +DAF EH V+ GD F + Sbjct: 118 RVMQTLDAESWFAATRCADETKGKPEPDMVLEL-LDAFSVRP--EHAVVV-GDSHFD--I 171 Query: 130 AALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 QR V ++ ++S Q DLA L+ + Sbjct: 172 EMAQRAG--VHGIAVGWGAQPLSSFAHSPQVTTVNDLAALRRALG 214 >gi|110816273|sp|Q55468|QUEC_SYNY3 RecName: Full=7-cyano-7-deazaguanine synthase; AltName: Full=7-cyano-7-carbaguanine synthase; AltName: Full=PreQ(0) synthase; AltName: Full=Queuosine biosynthesis protein queC Length = 232 Score = 33.9 bits (77), Expect = 9.1, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 20/46 (43%), Gaps = 2/46 (4%) Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161 +V+ SG T+ A +R+ +V +S +LR AD Sbjct: 6 VVLLSGGLDSATVAAIAKREGYRVIALSFNYGQRH--DRELRAAAD 49 >gi|332974390|gb|EGK11317.1| hypothetical protein HMPREF0476_0432 [Kingella kingae ATCC 23330] Length = 162 Score = 33.9 bits (77), Expect = 9.3, Method: Composition-based stats. Identities = 10/84 (11%), Positives = 31/84 (36%), Gaps = 10/84 (11%) Query: 86 TENCGRKRVKSSMDVELAVDAFEQS----EGLEHLVIFSGDGCFTTLVAALQRKVKKVTI 141 + K +D+++ +D + G + V+ + D F + + + ++ + Sbjct: 79 ADIAPNITQKG-VDMKIGLDMATLALKKASGRD-FVLVTADSDFVPAIKLARMEGVQIFL 136 Query: 142 VSTVLSDPSMASDQLRRQADYFMD 165 + +L+ +D +D Sbjct: 137 AHLGHTVKP----ELKEHSDVLLD 156 >gi|308183032|ref|YP_003927159.1| hypothetical protein HPPC_04435 [Helicobacter pylori PeCan4] gi|308065217|gb|ADO07109.1| hypothetical protein HPPC_04435 [Helicobacter pylori PeCan4] Length = 241 Score = 33.9 bits (77), Expect = 9.3, Method: Composition-based stats. Identities = 15/96 (15%), Positives = 38/96 (39%), Gaps = 6/96 (6%) Query: 78 VAKVAKEFTENCGRKRV---KSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAAL 132 K+ E G + + +D+ + +D + + ++IFS D + Sbjct: 127 RTKLNAIRVEFDGSYKALLEQKQVDMLMGLDIQRIAFKKIADRILIFSKDTDLIPALKLA 186 Query: 133 QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 + + +V ++ + + S+ S L+ +D L+ Sbjct: 187 RDEGLRVD-IADLSNRLSLLSQDLKYNSDKVRKLSS 221 >gi|295706434|ref|YP_003599509.1| isopentenyl-diphosphate delta-isomerase [Bacillus megaterium DSM 319] gi|294804093|gb|ADF41159.1| isopentenyl-diphosphate delta-isomerase [Bacillus megaterium DSM 319] Length = 350 Score = 33.9 bits (77), Expect = 9.4, Method: Composition-based stats. Identities = 16/74 (21%), Positives = 34/74 (45%), Gaps = 7/74 (9%) Query: 103 AVDAFE---QSEGLEHL---VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDP-SMASDQ 155 AVD E L + V+ GD FT + ++R +++VT+ V M++ Sbjct: 135 AVDMLEANGLQIHLNVIQELVMPEGDRDFTDALRRIERIIREVTVPVIVKEVGFGMSAQA 194 Query: 156 LRRQADYFMDLAYL 169 +++ D +++ + Sbjct: 195 VQKLKDVGVEIVDI 208 >gi|255318504|ref|ZP_05359737.1| diguanylate cyclase [Acinetobacter radioresistens SK82] gi|262378732|ref|ZP_06071889.1| conserved hypothetical protein [Acinetobacter radioresistens SH164] gi|255304496|gb|EET83680.1| diguanylate cyclase [Acinetobacter radioresistens SK82] gi|262300017|gb|EEY87929.1| conserved hypothetical protein [Acinetobacter radioresistens SH164] Length = 519 Score = 33.9 bits (77), Expect = 9.5, Method: Composition-based stats. Identities = 28/123 (22%), Positives = 48/123 (39%), Gaps = 13/123 (10%) Query: 3 DPREKIALFIDGA--NLY----ASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP 56 + KIA+ ID N+ S+K LG D ++ + R + YY + VV D Sbjct: 51 EHANKIAIIIDNHFKNILIELGYSAKILGKKFDDNEIRETEVQRLKMQSDYYNSVVVSDS 110 Query: 57 EQQFSPLHPLLDWLHYN------GFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110 E + P + + N G K K + + VK +M V ++ F++ Sbjct: 111 EGRLINYSPNILNIDKNKVQTTLGISNSIKEKKPYI-SSPYLSVKKNMIVFISYPIFDEK 169 Query: 111 EGL 113 + Sbjct: 170 KRY 172 >gi|297380079|gb|ADI34966.1| Hypothetical protein HPV225_0900 [Helicobacter pylori v225d] gi|308062202|gb|ADO04090.1| hypothetical protein HPCU_04660 [Helicobacter pylori Cuz20] Length = 243 Score = 33.9 bits (77), Expect = 9.6, Method: Composition-based stats. Identities = 15/96 (15%), Positives = 38/96 (39%), Gaps = 6/96 (6%) Query: 78 VAKVAKEFTENCGRKRV---KSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAAL 132 K+ E G + + +D+ + +D + + ++IFS D + Sbjct: 127 RTKLNAIRVEFDGSYKALLEQKQVDMLMGLDIQRIAFKKIADRILIFSKDTDLIPALKLA 186 Query: 133 QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 + + +V ++ + + S+ S L+ +D L+ Sbjct: 187 RDEGLRVD-IADLSNRLSLLSQDLKYNSDKVRKLSS 221 >gi|208435230|ref|YP_002266896.1| hypothetical protein HPG27_1282 [Helicobacter pylori G27] gi|208433159|gb|ACI28030.1| hypothetical protein HPG27_1282 [Helicobacter pylori G27] Length = 220 Score = 33.9 bits (77), Expect = 9.8, Method: Composition-based stats. Identities = 7/52 (13%), Positives = 23/52 (44%), Gaps = 2/52 (3%) Query: 87 ENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKV 136 ++ + +D+++ +D + + ++ +V+ SGD F + + Sbjct: 136 DDFIYHAKQKGVDIKIGLDIATLALKKLVQKIVLISGDSDFVPASKLARVEG 187 Database: nr Posted date: May 22, 2011 12:22 AM Number of letters in database: 999,999,966 Number of sequences in database: 2,987,313 Database: /data/usr2/db/fasta/nr.01 Posted date: May 22, 2011 12:30 AM Number of letters in database: 999,999,796 Number of sequences in database: 2,903,041 Database: /data/usr2/db/fasta/nr.02 Posted date: May 22, 2011 12:36 AM Number of letters in database: 999,999,281 Number of sequences in database: 2,904,016 Database: /data/usr2/db/fasta/nr.03 Posted date: May 22, 2011 12:41 AM Number of letters in database: 999,999,960 Number of sequences in database: 2,935,328 Database: /data/usr2/db/fasta/nr.04 Posted date: May 22, 2011 12:46 AM Number of letters in database: 842,794,627 Number of sequences in database: 2,394,679 Lambda K H 0.314 0.167 0.510 Lambda K H 0.267 0.0513 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 4,013,452,771 Number of Sequences: 14124377 Number of extensions: 183115251 Number of successful extensions: 528362 Number of sequences better than 10.0: 1672 Number of HSP's better than 10.0 without gapping: 1170 Number of HSP's successfully gapped in prelim test: 1064 Number of HSP's that attempted gapping in prelim test: 524533 Number of HSP's gapped (non-prelim): 2443 length of query: 182 length of database: 4,842,793,630 effective HSP length: 130 effective length of query: 52 effective length of database: 3,006,624,620 effective search space: 156344480240 effective search space used: 156344480240 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.1 bits) S2: 77 (33.9 bits)