RPSBLAST alignment for GI: 254780936 and conserved domain: cd06167
>gnl|CDD|100118 cd06167, LabA_like, LabA_like proteins. A well conserved group of bacterial proteins with no defined function. LabA, a member from Synechococcus elongatus PCC 7942, has been shown to play a role in cyanobacterial circadian timing. It is required for negative feedback regulation of the autokinase/autophosphatase KaiC, a central component of the circadian clock system. In particular, LabA seems necessary for KaiC-dependent repression of gene expression.. Length = 149
Score = 99.3 bits (248), Expect = 5e-22
Identities = 54/164 (32%), Positives = 80/164 (48%), Gaps = 18/164 (10%)
Query: 6 EKIALFIDGANLYASSKALG-FDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
+++A+FIDG NLY S + LG DYRKLL+ R ++ A Y Q+
Sbjct: 1 KRVAVFIDGENLYYSLRDLGGKRFDYRKLLEFLRDGGEIVLARAYGNWTSPERQR----- 55
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGD 122
LD L GF+ + K + K +DV LA+DA E + ++ +V+ SGD
Sbjct: 56 GFLDALRRLGFEPIQKPLRTR------GSGKKGVDVALAIDALELAYKRRIDTIVLVSGD 109
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
F LV L+ K+V +V + S +LR+ AD F+DL
Sbjct: 110 SDFVPLVERLRELGKRVIVVGF----EAKTSRELRKAADRFIDL 149