HHsearch alignment for GI: 254780937 and conserved domain: PRK00425

>PRK00425 rpoZ DNA-directed RNA polymerase subunit omega; Reviewed.

Probab=99.88  E-value=1.5e-23  Score=153.05  Aligned_cols=66  Identities=30%  Similarity=0.568  Sum_probs=63.2

Q ss_pred             CCEEEHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHH
Q ss_conf             960008998512878999999999999998578877677446854115675654058799999999
Q gi|254780937|r    1 MARTTVEDCIDKVDNRFLLVLLASHRTRHLSQGAKPTVDVGKDKNTVVALREIASGTLSPDDLEED   66 (122)
Q Consensus         1 MARvTvEdcl~kv~nrf~LVllAa~RArql~~G~~~~v~~~ndK~~ViALREIa~gki~~~~l~e~   66 (122)
T Consensus         2 M~~Psid~ll~kvdsrY~LV~~aAKRARqL~~g~~plv~~~~~Kpv~iALeEI~~gkvt~e~~~eG   67 (69)
T PRK00425          2 MINPSIVDLLEKVDDRYSLVILTAKRARQIIAGDEKLVDIESNKPLTIAINEVDQGLVTYERPEEG   67 (69)
T ss_pred             CCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCC
T ss_conf             877879999984578424689999999998759976668878860879999998599645406555